SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    980801 9giq:A (1.421) BS01 A1ILV N/A GO:0042981 ... Q16548 39641779
    980802 9gir:A (1.075) BS01 A1ILX N/A GO:0042981 ... Q16548 39641779
    980803 9gis:A (1.387) BS01 A1ILU N/A GO:0042981 ... Q16548 39641779
    980804 9gis:B (1.387) BS01 A1ILU N/A GO:0042981 ... Q16548 39641779
    980805 9gis:B (1.387) BS02 A1ILU N/A GO:0042981 ... Q16548 39641779
    980806 9git:A (1.145) BS01 A1ILW N/A GO:0042981 ... Q16548 39641779
    980807 9giu:A (2.8) BS01 Y01 N/A GO:0000297 ... Q5BKX6 40836097
    980808 9giu:A (2.8) BS02 Y01 N/A GO:0000297 ... Q5BKX6 40836097
    980809 9giu:A (2.8) BS03 Y01 N/A GO:0000297 ... Q5BKX6 40836097
    980810 9giu:A (2.8) BS04 Y01 N/A GO:0000297 ... Q5BKX6 40836097
    980811 9giu:A (2.8) BS05 Y01 N/A GO:0000297 ... Q5BKX6 40836097
    980812 9giu:A (2.8) BS06 Y01 N/A GO:0000297 ... Q5BKX6 40836097
    980813 9giv:A (3.65) BS01 A1IL4 N/A GO:0005515 ... P0DKB6 40249800
    980814 9giv:B (3.65) BS01 A1IL4 N/A GO:0005515 ... O95563 40249800
    980815 9giw:A (3.92) BS01 A1IL3 N/A GO:0005515 ... P0DKB6 40249800
    980816 9giw:B (3.92) BS01 A1IL3 N/A GO:0005515 ... O95563 40249800
    980817 9giy:A (3.79) BS01 LO7 N/A GO:0005515 ... P0DKB6 40249800
    980818 9giy:A (3.79) BS02 A1IMZ N/A GO:0005515 ... P0DKB6 40249800
    980819 9giy:B (3.79) BS01 LO7 N/A GO:0005515 ... O95563 40249800
    980820 9giy:B (3.79) BS02 A1IMZ N/A GO:0005515 ... O95563 40249800
    980821 9gj0:A (2.76) BS01 FAD N/A GO:0003824 ... Q0SBK1 N/A
    980822 9gj0:B (2.76) BS01 FAD N/A GO:0003824 ... Q0SBK1 N/A
    980823 9gj1:A (1.62) BS01 GLU N/A GO:0015276 ... Q00959 39560374
    980824 9gj1:B (1.62) BS01 A1IME N/A GO:0015276 ... Q05586 39560374
    980825 9gj2:A (1.15) BS01 KH0 N/A GO:0006508 ... P25774 N/A
    980826 9gj2:B (1.15) BS01 KH0 N/A GO:0006508 ... P25774 N/A
    980827 9gj5:A (4.61) BS01 rna N/A GO:0003676 ... Q9UQ80 N/A
    980828 9gj5:B (4.61) BS01 rna N/A GO:0003723 ... Q9BXJ9 N/A
    980829 9gj5:B (4.61) BS02 KGN N/A GO:0003723 ... Q9BXJ9 N/A
    980830 9gj5:LC (4.61) BS01 rna N/A GO:0002181 ... P36578 N/A
    980831 9gj5:LE (4.61) BS01 rna N/A GO:0002181 ... Q02878 N/A
    980832 9gj5:LR (4.61) BS01 rna N/A GO:0002181 ... P84098 N/A
    980833 9gj5:LX (4.61) BS01 rna N/A GO:0002181 ... P62750 N/A
    980834 9gj5:LY (4.61) BS01 rna N/A GO:0002181 ... P61254 N/A
    980835 9gj5:LY (4.61) BS02 rna N/A GO:0002181 ... P61254 N/A
    980836 9gj5:Lh (4.61) BS01 rna N/A GO:0000463 ... P42766 N/A
    980837 9gj5:Lk (4.61) BS01 rna N/A GO:0002181 ... P63173 N/A
    980838 9gj5:Lr (4.61) BS01 rna N/A GO:0002181 ... P46779 N/A
    980839 9gj6:B (3.91) BS01 rna N/A GO:0003723 ... Q9BXJ9 N/A
    980840 9gj6:B (3.91) BS02 IHP N/A GO:0003723 ... Q9BXJ9 N/A
    980841 9gj6:C (3.91) BS01 IHP N/A GO:0004596 ... P41227 N/A
    980842 9gj6:D (3.91) BS01 rna N/A GO:0003723 ... Q9BXJ9 N/A
    980843 9gj6:D (3.91) BS02 IHP N/A GO:0003723 ... Q9BXJ9 N/A
    980844 9gj6:LC (3.91) BS01 rna N/A GO:0002181 ... P36578 N/A
    980845 9gj6:LE (3.91) BS01 rna N/A GO:0002181 ... Q02878 N/A
    980846 9gj6:LP (3.91) BS01 rna N/A GO:0002181 ... P18621 N/A
    980847 9gj6:LR (3.91) BS01 rna N/A GO:0002181 ... P84098 N/A
    980848 9gj6:LU (3.91) BS01 rna N/A GO:0002181 ... P35268 N/A
    980849 9gj6:LX (3.91) BS01 rna N/A GO:0002181 ... P62750 N/A
    980850 9gj6:LX (3.91) BS02 rna N/A GO:0002181 ... P62750 N/A
    980851 9gj6:LY (3.91) BS01 rna N/A GO:0002181 ... P61254 N/A
    980852 9gj6:LY (3.91) BS02 rna N/A GO:0002181 ... P61254 N/A
    980853 9gj6:Ld (3.91) BS01 rna N/A GO:0002181 ... P62899 N/A
    980854 9gj6:Lh (3.91) BS01 rna N/A GO:0000463 ... P42766 N/A
    980855 9gj6:Lk (3.91) BS01 rna N/A GO:0002181 ... P63173 N/A
    980856 9gj6:Lr (3.91) BS01 rna N/A GO:0002181 ... P46779 N/A
    980857 9gj8:A (2.1) BS01 FO4 N/A GO:0005576 ... P07845 40991702
    980858 9gj8:A (2.1) BS02 FO4 N/A GO:0005576 ... P07845 40991702
    980859 9gj8:A (2.1) BS03 FO4 N/A GO:0005576 ... P07845 40991702
    980860 9gj8:A (2.1) BS04 FO4 N/A GO:0005576 ... P07845 40991702
    980861 9gj8:A (2.1) BS05 FO4 N/A GO:0005576 ... P07845 40991702
    980862 9gj8:A (2.1) BS06 CLR N/A GO:0005576 ... P07845 40991702
    980863 9gj8:A (2.1) BS07 CLR N/A GO:0005576 ... P07845 40991702
    980864 9gj8:B (2.1) BS01 FO4 N/A GO:0005576 ... P07845 40991702
    980865 9gj8:B (2.1) BS02 FO4 N/A GO:0005576 ... P07845 40991702
    980866 9gj8:B (2.1) BS03 FO4 N/A GO:0005576 ... P07845 40991702
    980867 9gj8:B (2.1) BS04 FO4 N/A GO:0005576 ... P07845 40991702
    980868 9gj8:B (2.1) BS05 FO4 N/A GO:0005576 ... P07845 40991702
    980869 9gj8:B (2.1) BS06 CLR N/A GO:0005576 ... P07845 40991702
    980870 9gj8:B (2.1) BS07 CLR N/A GO:0005576 ... P07845 40991702
    980871 9gj8:C (2.1) BS01 FO4 N/A GO:0005576 ... P07845 40991702
    980872 9gj8:C (2.1) BS02 FO4 N/A GO:0005576 ... P07845 40991702
    980873 9gj8:C (2.1) BS03 FO4 N/A GO:0005576 ... P07845 40991702
    980874 9gj8:C (2.1) BS04 CLR N/A GO:0005576 ... P07845 40991702
    980875 9gj8:C (2.1) BS05 CLR N/A GO:0005576 ... P07845 40991702
    980876 9gj8:C (2.1) BS06 FO4 N/A GO:0005576 ... P07845 40991702
    980877 9gj8:C (2.1) BS07 FO4 N/A GO:0005576 ... P07845 40991702
    980878 9gj8:E (2.1) BS01 FO4 N/A GO:0005576 ... P07845 40991702
    980879 9gj8:E (2.1) BS02 FO4 N/A GO:0005576 ... P07845 40991702
    980880 9gj8:E (2.1) BS03 FO4 N/A GO:0005576 ... P07845 40991702
    980881 9gj8:E (2.1) BS04 FO4 N/A GO:0005576 ... P07845 40991702
    980882 9gj8:E (2.1) BS05 FO4 N/A GO:0005576 ... P07845 40991702
    980883 9gj8:E (2.1) BS06 CLR N/A GO:0005576 ... P07845 40991702
    980884 9gj8:E (2.1) BS07 CLR N/A GO:0005576 ... P07845 40991702
    980885 9gj8:G (2.1) BS01 FO4 N/A GO:0005576 ... P07845 40991702
    980886 9gj8:G (2.1) BS02 FO4 N/A GO:0005576 ... P07845 40991702
    980887 9gj8:G (2.1) BS03 FO4 N/A GO:0005576 ... P07845 40991702
    980888 9gj8:G (2.1) BS04 FO4 N/A GO:0005576 ... P07845 40991702
    980889 9gj8:G (2.1) BS05 FO4 N/A GO:0005576 ... P07845 40991702
    980890 9gj8:G (2.1) BS06 CLR N/A GO:0005576 ... P07845 40991702
    980891 9gj8:G (2.1) BS07 CLR N/A GO:0005576 ... P07845 40991702
    980892 9gj8:I (2.1) BS01 FO4 N/A GO:0005576 ... P07845 40991702
    980893 9gj8:I (2.1) BS02 FO4 N/A GO:0005576 ... P07845 40991702
    980894 9gj8:I (2.1) BS03 FO4 N/A GO:0005576 ... P07845 40991702
    980895 9gj8:I (2.1) BS04 FO4 N/A GO:0005576 ... P07845 40991702
    980896 9gj8:I (2.1) BS05 FO4 N/A GO:0005576 ... P07845 40991702
    980897 9gj8:I (2.1) BS06 CLR N/A GO:0005576 ... P07845 40991702
    980898 9gj8:I (2.1) BS07 CLR N/A GO:0005576 ... P07845 40991702
    980899 9gj8:J (2.1) BS01 FO4 N/A GO:0005576 ... P07845 40991702
    980900 9gj8:J (2.1) BS02 FO4 N/A GO:0005576 ... P07845 40991702
    980901 9gj8:J (2.1) BS03 FO4 N/A GO:0005576 ... P07845 40991702
    980902 9gj8:J (2.1) BS04 FO4 N/A GO:0005576 ... P07845 40991702
    980903 9gj8:J (2.1) BS05 FO4 N/A GO:0005576 ... P07845 40991702
    980904 9gj8:J (2.1) BS06 CLR N/A GO:0005576 ... P07845 40991702
    980905 9gj8:J (2.1) BS07 CLR N/A GO:0005576 ... P07845 40991702
    980906 9gj8:L (2.1) BS01 FO4 N/A GO:0005576 ... P07845 40991702
    980907 9gj8:L (2.1) BS02 FO4 N/A GO:0005576 ... P07845 40991702
    980908 9gj8:L (2.1) BS03 FO4 N/A GO:0005576 ... P07845 40991702
    980909 9gj8:L (2.1) BS04 FO4 N/A GO:0005576 ... P07845 40991702
    980910 9gj8:L (2.1) BS05 FO4 N/A GO:0005576 ... P07845 40991702
    980911 9gj8:L (2.1) BS06 CLR N/A GO:0005576 ... P07845 40991702
    980912 9gj8:L (2.1) BS07 CLR N/A GO:0005576 ... P07845 40991702
    980913 9gj9:A (2.492) BS01 NLE N/A GO:0003824 ... A0A1H1YBL2 N/A
    980914 9gj9:B (2.492) BS01 NLE N/A GO:0003824 ... A0A1H1YBL2 N/A
    980915 9gj9:C (2.492) BS01 NLE N/A GO:0003824 ... A0A1H1YBL2 N/A
    980916 9gj9:D (2.492) BS01 NLE N/A GO:0003824 ... A0A1H1YBL2 N/A
    980917 9gj9:E (2.492) BS01 NLE N/A GO:0003824 ... A0A1H1YBL2 N/A
    980918 9gj9:F (2.492) BS01 NLE N/A GO:0003824 ... A0A1H1YBL2 N/A
    980919 9gja:H (3.7) BS01 BMA N/A N/A P32022 N/A
    980920 9gja:H (3.7) BS02 MAN N/A N/A P32022 N/A
    980921 9gjb:H (3.5) BS01 MAN N/A N/A P32022 N/A
    980922 9gjc:H (3.9) BS01 BMA N/A N/A P32022 N/A
    980923 9gjc:H (3.9) BS02 MAN N/A N/A P32022 N/A
    980924 9gjc:H (3.9) BS03 MAN N/A N/A P32022 N/A
    980925 9gjd:H (3.2) BS01 BMA N/A N/A P32022 N/A
    980926 9gjd:H (3.2) BS02 MAN N/A N/A P32022 N/A
    980927 9gjd:H (3.2) BS03 MAN N/A N/A P32022 N/A
    980928 9gjd:H (3.2) BS04 MAN N/A N/A P32022 N/A
    980929 9gje:H (3.2) BS01 BMA N/A N/A P32022 N/A
    980930 9gje:H (3.2) BS02 MAN N/A N/A P32022 N/A
    980931 9gje:H (3.2) BS03 MAN N/A N/A P32022 N/A
    980932 9gje:H (3.2) BS04 MAN N/A N/A P32022 N/A
    980933 9gjf:H (3.1) BS01 BMA N/A N/A P32022 N/A
    980934 9gjf:H (3.1) BS02 MAN N/A N/A P32022 N/A
    980935 9gjf:H (3.1) BS03 MAN N/A N/A P32022 N/A
    980936 9gjg:H (3.0) BS01 BMA N/A N/A P32022 N/A
    980937 9gjg:H (3.0) BS02 MAN N/A N/A P32022 N/A
    980938 9gjh:H (3.0) BS01 BMA N/A N/A P32022 N/A
    980939 9gjh:H (3.0) BS02 MAN N/A N/A P32022 N/A
    980940 9gjh:H (3.0) BS03 MAN N/A N/A P32022 N/A
    980941 9gjh:H (3.0) BS04 MAN N/A N/A P32022 N/A
    980942 9gjh:L (3.0) BS01 GAL N/A N/A Q03077 N/A
    980943 9gji:H (3.4) BS01 BMA N/A N/A P32022 N/A
    980944 9gji:H (3.4) BS02 MAN N/A N/A P32022 N/A
    980945 9gji:H (3.4) BS03 MAN N/A N/A P32022 N/A
    980946 9gji:H (3.4) BS04 MAN N/A N/A P32022 N/A
    980947 9gji:L (3.4) BS01 GAL N/A N/A Q03077 N/A
    980948 9gjj:H (3.9) BS01 BMA N/A N/A P32022 N/A
    980949 9gjj:H (3.9) BS02 MAN N/A N/A P32022 N/A
    980950 9gjj:H (3.9) BS03 MAN N/A N/A P32022 N/A
    980951 9gjj:H (3.9) BS04 MAN N/A N/A P32022 N/A
    980952 9gjk:H (3.3) BS01 BMA N/A N/A P32022 N/A
    980953 9gjk:H (3.3) BS02 MAN N/A N/A P32022 N/A
    980954 9gjk:L (3.3) BS01 GAL N/A N/A Q03077 N/A
    980955 9gjl:H (3.4) BS01 BMA N/A N/A P32022 N/A
    980956 9gjl:H (3.4) BS02 MAN N/A N/A P32022 N/A
    980957 9gjl:L (3.4) BS01 GAL N/A N/A Q03077 N/A
    980958 9gjm:H (3.9) BS01 BMA N/A N/A P32022 N/A
    980959 9gjm:H (3.9) BS02 MAN N/A N/A P32022 N/A
    980960 9gjm:H (3.9) BS03 MAN N/A N/A P32022 N/A
    980961 9gjm:H (3.9) BS04 MAN N/A N/A P32022 N/A
    980962 9gjm:L (3.9) BS01 GAL N/A N/A Q03077 N/A
    980963 9gjn:A (1.717) BS01 ZN N/A GO:0006508 ... Q9NZ08 39691536
    980964 9gjn:A (1.717) BS02 A1IMK N/A GO:0006508 ... Q9NZ08 39691536
    980965 9gjn:B (1.717) BS01 ZN N/A GO:0006508 ... Q9NZ08 39691536
    980966 9gjn:B (1.717) BS02 A1IMK N/A GO:0006508 ... Q9NZ08 39691536
    980967 9gjp:2 (3.4) BS01 dna N/A GO:0000727 ... P29469 39824870
    980968 9gjp:2 (3.4) BS02 ADP N/A GO:0000727 ... P29469 39824870
    980969 9gjp:2 (3.4) BS03 ZN N/A GO:0000727 ... P29469 39824870
    980970 9gjp:2 (3.4) BS04 ADP N/A GO:0000727 ... P29469 39824870
    980971 9gjp:4 (3.4) BS01 dna N/A GO:0000727 ... P30665 39824870
    980972 9gjp:4 (3.4) BS02 dna N/A GO:0000727 ... P30665 39824870
    980973 9gjp:4 (3.4) BS03 ADP N/A GO:0000727 ... P30665 39824870
    980974 9gjp:4 (3.4) BS04 ZN N/A GO:0000727 ... P30665 39824870
    980975 9gjp:5 (3.4) BS01 dna N/A GO:0000727 ... P29496 39824870
    980976 9gjp:5 (3.4) BS02 dna N/A GO:0000727 ... P29496 39824870
    980977 9gjp:5 (3.4) BS03 ADP N/A GO:0000727 ... P29496 39824870
    980978 9gjp:5 (3.4) BS04 ZN N/A GO:0000727 ... P29496 39824870
    980979 9gjp:6 (3.4) BS01 dna N/A GO:0000727 ... P53091 39824870
    980980 9gjp:6 (3.4) BS02 ADP N/A GO:0000727 ... P53091 39824870
    980981 9gjp:6 (3.4) BS03 ADP N/A GO:0000727 ... P53091 39824870
    980982 9gjp:6 (3.4) BS04 ZN N/A GO:0000727 ... P53091 39824870
    980983 9gjp:7 (3.4) BS01 ADP N/A GO:0000727 ... P38132 39824870
    980984 9gjp:7 (3.4) BS02 ZN N/A GO:0000727 ... P38132 39824870
    980985 9gjp:C (3.4) BS01 dna N/A GO:0003677 ... P54790 39824870
    980986 9gjp:C (3.4) BS02 dna N/A GO:0003677 ... P54790 39824870
    980987 9gjp:D (3.4) BS01 dna N/A GO:0000808 ... P54791 39824870
    980988 9gjp:D (3.4) BS02 ATP N/A GO:0000808 ... P54791 39824870
    980989 9gjp:E (3.4) BS01 dna N/A GO:0000808 ... P50874 39824870
    980990 9gjp:E (3.4) BS02 ATP N/A GO:0000808 ... P50874 39824870
    980991 9gjq:A (1.393) BS01 A1IMN N/A N/A A4TVL0 N/A
    980992 9gjq:A (1.393) BS02 ZN N/A N/A A4TVL0 N/A
    980993 9gjr:A (1.45) BS01 A1IMI N/A N/A E9AMX7 N/A
    980994 9gjr:C (1.45) BS01 A1IMI N/A N/A E9AMX7 N/A
    980995 9gjr:C (1.45) BS02 BU3 N/A N/A E9AMX7 N/A
    980996 9gjs:A (1.351) BS01 ZN N/A GO:0006508 ... Q9NZ08 39691536
    980997 9gjs:A (1.351) BS02 A1IMJ N/A GO:0006508 ... Q9NZ08 39691536
    980998 9gjs:A (1.351) BS03 A1IMJ N/A GO:0006508 ... Q9NZ08 39691536
    980999 9gjt:A (2.6) BS01 ZN N/A GO:0000166 ... Q997F0 40050611
    981000 9gjt:A (2.6) BS02 ZN N/A GO:0000166 ... Q997F0 40050611

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).