SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    981201 9gkp:C (2.5) BS05 CLR N/A GO:0005576 ... B9W5G6 40991702
    981202 9gkp:C (2.5) BS06 CLR N/A GO:0005576 ... B9W5G6 40991702
    981203 9gkp:C (2.5) BS07 FO4 N/A GO:0005576 ... B9W5G6 40991702
    981204 9gkp:C (2.5) BS08 FO4 N/A GO:0005576 ... B9W5G6 40991702
    981205 9gkp:D (2.5) BS01 FO4 N/A GO:0005576 ... B9W5G6 40991702
    981206 9gkp:D (2.5) BS02 FO4 N/A GO:0005576 ... B9W5G6 40991702
    981207 9gkp:D (2.5) BS03 FO4 N/A GO:0005576 ... B9W5G6 40991702
    981208 9gkp:D (2.5) BS04 CLR N/A GO:0005576 ... B9W5G6 40991702
    981209 9gkp:D (2.5) BS05 CLR N/A GO:0005576 ... B9W5G6 40991702
    981210 9gkp:D (2.5) BS06 CLR N/A GO:0005576 ... B9W5G6 40991702
    981211 9gkp:D (2.5) BS07 FO4 N/A GO:0005576 ... B9W5G6 40991702
    981212 9gkp:D (2.5) BS08 FO4 N/A GO:0005576 ... B9W5G6 40991702
    981213 9gkp:E (2.5) BS01 FO4 N/A GO:0005576 ... B9W5G6 40991702
    981214 9gkp:E (2.5) BS02 FO4 N/A GO:0005576 ... B9W5G6 40991702
    981215 9gkp:E (2.5) BS03 FO4 N/A GO:0005576 ... B9W5G6 40991702
    981216 9gkp:E (2.5) BS04 CLR N/A GO:0005576 ... B9W5G6 40991702
    981217 9gkp:E (2.5) BS05 CLR N/A GO:0005576 ... B9W5G6 40991702
    981218 9gkp:E (2.5) BS06 CLR N/A GO:0005576 ... B9W5G6 40991702
    981219 9gkp:E (2.5) BS07 FO4 N/A GO:0005576 ... B9W5G6 40991702
    981220 9gkp:E (2.5) BS08 FO4 N/A GO:0005576 ... B9W5G6 40991702
    981221 9gkp:F (2.5) BS01 FO4 N/A GO:0005576 ... B9W5G6 40991702
    981222 9gkp:F (2.5) BS02 FO4 N/A GO:0005576 ... B9W5G6 40991702
    981223 9gkp:F (2.5) BS03 FO4 N/A GO:0005576 ... B9W5G6 40991702
    981224 9gkp:F (2.5) BS04 CLR N/A GO:0005576 ... B9W5G6 40991702
    981225 9gkp:F (2.5) BS05 CLR N/A GO:0005576 ... B9W5G6 40991702
    981226 9gkp:F (2.5) BS06 CLR N/A GO:0005576 ... B9W5G6 40991702
    981227 9gkp:F (2.5) BS07 FO4 N/A GO:0005576 ... B9W5G6 40991702
    981228 9gkp:F (2.5) BS08 FO4 N/A GO:0005576 ... B9W5G6 40991702
    981229 9gkp:G (2.5) BS01 FO4 N/A GO:0005576 ... B9W5G6 40991702
    981230 9gkp:G (2.5) BS02 FO4 N/A GO:0005576 ... B9W5G6 40991702
    981231 9gkp:G (2.5) BS03 CLR N/A GO:0005576 ... B9W5G6 40991702
    981232 9gkp:G (2.5) BS04 CLR N/A GO:0005576 ... B9W5G6 40991702
    981233 9gkp:G (2.5) BS05 CLR N/A GO:0005576 ... B9W5G6 40991702
    981234 9gkp:G (2.5) BS06 FO4 N/A GO:0005576 ... B9W5G6 40991702
    981235 9gkp:G (2.5) BS07 FO4 N/A GO:0005576 ... B9W5G6 40991702
    981236 9gkp:G (2.5) BS08 FO4 N/A GO:0005576 ... B9W5G6 40991702
    981237 9gkp:H (2.5) BS01 FO4 N/A GO:0005576 ... B9W5G6 40991702
    981238 9gkp:H (2.5) BS02 FO4 N/A GO:0005576 ... B9W5G6 40991702
    981239 9gkp:H (2.5) BS03 FO4 N/A GO:0005576 ... B9W5G6 40991702
    981240 9gkp:H (2.5) BS04 FO4 N/A GO:0005576 ... B9W5G6 40991702
    981241 9gkp:H (2.5) BS05 CLR N/A GO:0005576 ... B9W5G6 40991702
    981242 9gkp:H (2.5) BS06 CLR N/A GO:0005576 ... B9W5G6 40991702
    981243 9gkp:H (2.5) BS07 CLR N/A GO:0005576 ... B9W5G6 40991702
    981244 9gkp:H (2.5) BS08 FO4 N/A GO:0005576 ... B9W5G6 40991702
    981245 9gku:A (1.48) BS01 BGC N/A GO:0004407 ... A0ACD6B8L2 39489725
    981246 9gku:A (1.48) BS02 ZN N/A GO:0004407 ... A0ACD6B8L2 39489725
    981247 9gku:B (1.48) BS01 BGC N/A GO:0004407 ... A0ACD6B8L2 39489725
    981248 9gku:B (1.48) BS02 ZN N/A GO:0004407 ... A0ACD6B8L2 39489725
    981249 9gku:C (1.48) BS01 BGC N/A GO:0004407 ... A0ACD6B8L2 39489725
    981250 9gku:C (1.48) BS02 BGC N/A GO:0004407 ... A0ACD6B8L2 39489725
    981251 9gku:C (1.48) BS03 ZN N/A GO:0004407 ... A0ACD6B8L2 39489725
    981252 9gku:D (1.48) BS01 ZN N/A GO:0004407 ... A0ACD6B8L2 39489725
    981253 9gku:E (1.48) BS01 BGC N/A GO:0004407 ... A0ACD6B8L2 39489725
    981254 9gku:E (1.48) BS02 BGC N/A GO:0004407 ... A0ACD6B8L2 39489725
    981255 9gku:E (1.48) BS03 ZN N/A GO:0004407 ... A0ACD6B8L2 39489725
    981256 9gku:F (1.48) BS01 BGC N/A GO:0004407 ... A0ACD6B8L2 39489725
    981257 9gku:F (1.48) BS02 ZN N/A GO:0004407 ... A0ACD6B8L2 39489725
    981258 9gku:G (1.48) BS01 BGC N/A GO:0004407 ... A0ACD6B8L2 39489725
    981259 9gku:G (1.48) BS02 ZN N/A GO:0004407 ... A0ACD6B8L2 39489725
    981260 9gku:H (1.48) BS01 BGC N/A GO:0004407 ... A0ACD6B8L2 39489725
    981261 9gku:H (1.48) BS02 ZN N/A GO:0004407 ... A0ACD6B8L2 39489725
    981262 9gkv:A (1.9) BS01 ZN N/A GO:0004407 ... A0A395TF31 39489725
    981263 9gkv:B (1.9) BS01 SHH N/A GO:0004407 ... A0A395TF31 39489725
    981264 9gkv:B (1.9) BS02 ZN N/A GO:0004407 ... A0A395TF31 39489725
    981265 9gkw:A (2.1) BS01 OCA N/A GO:0004407 ... A0A067XIQ6 39489725
    981266 9gkw:A (2.1) BS02 ZN N/A GO:0004407 ... A0A067XIQ6 39489725
    981267 9gkw:B (2.1) BS01 OCA N/A GO:0004407 ... A0A067XIQ6 39489725
    981268 9gkw:B (2.1) BS02 ZN N/A GO:0004407 ... A0A067XIQ6 39489725
    981269 9gkw:C (2.1) BS01 OCA N/A GO:0004407 ... A0A067XIQ6 39489725
    981270 9gkw:C (2.1) BS02 ZN N/A GO:0004407 ... A0A067XIQ6 39489725
    981271 9gkw:D (2.1) BS01 OCA N/A GO:0004407 ... A0A067XIQ6 39489725
    981272 9gkw:D (2.1) BS02 ZN N/A GO:0004407 ... A0A067XIQ6 39489725
    981273 9gkx:A (1.75) BS01 SHH N/A GO:0004407 ... A0A067XIQ6 39489725
    981274 9gkx:A (1.75) BS02 ZN N/A GO:0004407 ... A0A067XIQ6 39489725
    981275 9gkx:B (1.75) BS01 OCA N/A GO:0004407 ... A0A067XIQ6 39489725
    981276 9gkx:B (1.75) BS02 ZN N/A GO:0004407 ... A0A067XIQ6 39489725
    981277 9gkx:C (1.75) BS01 SHH N/A GO:0004407 ... A0A067XIQ6 39489725
    981278 9gkx:C (1.75) BS02 ZN N/A GO:0004407 ... A0A067XIQ6 39489725
    981279 9gkx:D (1.75) BS01 OCA N/A GO:0004407 ... A0A067XIQ6 39489725
    981280 9gkx:D (1.75) BS02 ZN N/A GO:0004407 ... A0A067XIQ6 39489725
    981281 9gky:A (1.13) BS01 ZN N/A GO:0004407 ... A0A395TF31 39489725
    981282 9gky:B (1.13) BS01 ZN N/A GO:0004407 ... A0A395TF31 39489725
    981283 9gkz:A (2.72) BS01 ZN N/A GO:0004407 ... A0ACD6B8Z7 39489725
    981284 9gkz:B (2.72) BS01 ZN N/A GO:0004407 ... A0ACD6B8Z7 39489725
    981285 9gl0:A (2.7) BS01 ZN N/A N/A A0A2S6EWV0 39489725
    981286 9gl0:B (2.7) BS01 ZN N/A N/A A0A2S6EWV0 39489725
    981287 9gl0:C (2.7) BS01 ZN N/A N/A A0A2S6EWV0 39489725
    981288 9gl0:D (2.7) BS01 ZN N/A N/A A0A2S6EWV0 39489725
    981289 9gl1:A (2.4) BS01 ZN N/A GO:0004407 ... A0A0W0SGS1 39489725
    981290 9gl2:R (3.2) BS01 CLR N/A GO:0001586 ... P08908 40531992
    981291 9gl2:R (3.2) BS02 T7M N/A GO:0001586 ... P08908 40531992
    981292 9gl2:R (3.2) BS03 ZKV N/A GO:0001586 ... P08908 40531992
    981293 9gl3:A (3.2) BS01 ATP N/A GO:0005524 ... G7CBF5 39880813
    981294 9gl3:A (3.2) BS02 ATP N/A GO:0005524 ... G7CBF5 39880813
    981295 9gl3:B (3.2) BS01 ATP N/A GO:0005524 ... G7CBF6 39880813
    981296 9gl3:B (3.2) BS02 ATP N/A GO:0005524 ... G7CBF6 39880813
    981297 9gl5:A (1.9) BS01 C2E N/A N/A Q72H73 40272996
    981298 9gl5:B (1.9) BS01 C2E N/A N/A Q72H73 40272996
    981299 9gl6:A (2.6) BS01 Y01 N/A GO:0005216 ... Q9UL62 N/A
    981300 9gl6:A (2.6) BS02 CA N/A GO:0005216 ... Q9UL62 N/A
    981301 9gl6:A (2.6) BS03 A1IMP N/A GO:0005216 ... Q9UL62 N/A
    981302 9gl6:B (2.6) BS01 Y01 N/A GO:0005216 ... Q9UL62 N/A
    981303 9gl6:B (2.6) BS02 CA N/A GO:0005216 ... Q9UL62 N/A
    981304 9gl6:B (2.6) BS03 A1IMP N/A GO:0005216 ... Q9UL62 N/A
    981305 9gl6:C (2.6) BS01 Y01 N/A GO:0005216 ... Q9UL62 N/A
    981306 9gl6:C (2.6) BS02 CA N/A GO:0005216 ... Q9UL62 N/A
    981307 9gl6:C (2.6) BS03 A1IMP N/A GO:0005216 ... Q9UL62 N/A
    981308 9gl6:D (2.6) BS01 Y01 N/A GO:0005216 ... Q9UL62 N/A
    981309 9gl6:D (2.6) BS02 CA N/A GO:0005216 ... Q9UL62 N/A
    981310 9gl6:D (2.6) BS03 A1IMP N/A GO:0005216 ... Q9UL62 N/A
    981311 9gl7:A (1.878) BS01 A1IMS N/A GO:0004672 ... P00533 40465424
    981312 9gl8:A (1.632) BS01 A1IMT N/A GO:0004672 ... P00533 40465424
    981313 9gl9:A (2.147) BS01 A1IMT N/A GO:0004672 ... P00533 40465424
    981314 9gla:A (2.18) BS01 YNK N/A GO:0000082 ... P24941 39733900
    981315 9glb:C (2.1) BS01 ZN N/A GO:0004407 ... A0A377Z5F6 39489725
    981316 9gle:A (1.88) BS01 ZN N/A N/A O75164 N/A
    981317 9gle:B (1.88) BS01 ZN N/A N/A O75164 N/A
    981318 9glg:A (1.55) BS01 C2E N/A N/A Q72H73 40272996
    981319 9glg:B (1.55) BS01 C2E N/A N/A Q72H73 40272996
    981320 9glq:A (2.1) BS01 CO N/A GO:0003677 ... O15350 39695090
    981321 9glu:A (1.9) BS01 peptide N/A N/A P01116 41330964
    981322 9glu:A (1.9) BS02 GDP N/A N/A P01116 41330964
    981323 9glu:B (1.9) BS01 peptide N/A N/A P01116 41330964
    981324 9glu:B (1.9) BS02 peptide N/A N/A P01116 41330964
    981325 9glu:B (1.9) BS03 GDP N/A N/A P01116 41330964
    981326 9glv:A (1.93) BS01 A1IMY N/A GO:0008233 ... P0DTC1 39577571
    981327 9glv:B (1.93) BS01 A1IMY N/A GO:0008233 ... P0DTC1 39577571
    981328 9glw:A (2.1) BS01 peptide N/A N/A P01111 41330964
    981329 9glw:A (2.1) BS02 MG N/A N/A P01111 41330964
    981330 9glw:A (2.1) BS03 GTP N/A N/A P01111 41330964
    981331 9glx:A (1.85) BS01 peptide N/A N/A P01111 41330964
    981332 9glx:A (1.85) BS02 peptide N/A N/A P01111 41330964
    981333 9glx:A (1.85) BS03 peptide N/A N/A P01111 41330964
    981334 9glx:A (1.85) BS04 MG N/A N/A P01111 41330964
    981335 9glx:A (1.85) BS05 GTP N/A N/A P01111 41330964
    981336 9glx:B (1.85) BS01 peptide N/A N/A P01111 41330964
    981337 9glx:B (1.85) BS02 peptide N/A N/A P01111 41330964
    981338 9glx:B (1.85) BS03 peptide N/A N/A P01111 41330964
    981339 9glx:B (1.85) BS04 MG N/A N/A P01111 41330964
    981340 9glx:B (1.85) BS05 GTP N/A N/A P01111 41330964
    981341 9glx:C (1.85) BS01 peptide N/A N/A P01111 41330964
    981342 9glx:C (1.85) BS02 peptide N/A N/A P01111 41330964
    981343 9glx:C (1.85) BS03 peptide N/A N/A P01111 41330964
    981344 9glx:C (1.85) BS04 MG N/A N/A P01111 41330964
    981345 9glx:C (1.85) BS05 GTP N/A N/A P01111 41330964
    981346 9glx:D (1.85) BS01 peptide N/A N/A P01111 41330964
    981347 9glx:D (1.85) BS02 peptide N/A N/A P01111 41330964
    981348 9glx:D (1.85) BS03 peptide N/A N/A P01111 41330964
    981349 9glx:D (1.85) BS04 MG N/A N/A P01111 41330964
    981350 9glx:D (1.85) BS05 GTP N/A N/A P01111 41330964
    981351 9glx:E (1.85) BS01 peptide N/A N/A P01111 41330964
    981352 9glx:E (1.85) BS02 MG N/A N/A P01111 41330964
    981353 9glx:E (1.85) BS03 GTP N/A N/A P01111 41330964
    981354 9glx:F (1.85) BS01 peptide N/A N/A P01111 41330964
    981355 9glx:F (1.85) BS02 MG N/A N/A P01111 41330964
    981356 9glx:F (1.85) BS03 GTP N/A N/A P01111 41330964
    981357 9gly:A (1.54) BS01 CU N/A GO:0005507 ... N/A N/A
    981358 9gly:A (1.54) BS02 CU N/A GO:0005507 ... N/A N/A
    981359 9gly:A (1.54) BS03 CU N/A GO:0005507 ... N/A N/A
    981360 9gly:A (1.54) BS04 CU N/A GO:0005507 ... N/A N/A
    981361 9gly:A (1.54) BS05 CA N/A GO:0005507 ... N/A N/A
    981362 9glz:A (2.1) BS01 MG N/A GO:0003925 ... A0A7K5XXT4 41330964
    981363 9glz:A (2.1) BS02 GNP N/A GO:0003925 ... A0A7K5XXT4 41330964
    981364 9glz:B (2.1) BS01 GNP N/A GO:0003925 ... A0A7K5XXT4 41330964
    981365 9gm0:A (1.65) BS01 F42 N/A GO:0008726 ... A0A561UC02 40374670
    981366 9gm2:C (2.1) BS01 dna N/A N/A N/A N/A
    981367 9gm2:C (2.1) BS02 dna N/A N/A N/A N/A
    981368 9gm2:D (2.1) BS01 dna N/A N/A N/A N/A
    981369 9gm2:D (2.1) BS02 dna N/A N/A N/A N/A
    981370 9gm3:A (1.653) BS01 SF4 N/A GO:0003824 ... A0A2T1C2J1 40354606
    981371 9gm3:A (1.653) BS02 SF4 N/A GO:0003824 ... A0A2T1C2J1 40354606
    981372 9gm3:A (1.653) BS03 SAH N/A GO:0003824 ... A0A2T1C2J1 40354606
    981373 9gm3:C (1.653) BS01 SF4 N/A GO:0003824 ... A0A2T1C2J1 40354606
    981374 9gm3:C (1.653) BS02 SF4 N/A GO:0003824 ... A0A2T1C2J1 40354606
    981375 9gm3:C (1.653) BS03 SAH N/A GO:0003824 ... A0A2T1C2J1 40354606
    981376 9gm3:D (1.653) BS01 ZN N/A N/A N/A 40354606
    981377 9gm4:A (1.51) BS01 ZN N/A GO:0004222 ... P14756 N/A
    981378 9gm4:A (1.51) BS02 CA N/A GO:0004222 ... P14756 N/A
    981379 9gm4:A (1.51) BS03 A1IM0 N/A GO:0004222 ... P14756 N/A
    981380 9gm5:2 (3.7) BS01 dna N/A GO:0000727 ... P29469 39824870
    981381 9gm5:2 (3.7) BS02 ADP N/A GO:0000727 ... P29469 39824870
    981382 9gm5:2 (3.7) BS03 ZN N/A GO:0000727 ... P29469 39824870
    981383 9gm5:2 (3.7) BS04 ADP N/A GO:0000727 ... P29469 39824870
    981384 9gm5:4 (3.7) BS01 dna N/A GO:0000727 ... P30665 39824870
    981385 9gm5:4 (3.7) BS02 ADP N/A GO:0000727 ... P30665 39824870
    981386 9gm5:4 (3.7) BS03 ZN N/A GO:0000727 ... P30665 39824870
    981387 9gm5:5 (3.7) BS01 dna N/A GO:0000727 ... P29496 39824870
    981388 9gm5:5 (3.7) BS02 dna N/A GO:0000727 ... P29496 39824870
    981389 9gm5:5 (3.7) BS03 ADP N/A GO:0000727 ... P29496 39824870
    981390 9gm5:5 (3.7) BS04 ZN N/A GO:0000727 ... P29496 39824870
    981391 9gm5:6 (3.7) BS01 dna N/A GO:0000727 ... P53091 39824870
    981392 9gm5:6 (3.7) BS02 dna N/A GO:0000727 ... P53091 39824870
    981393 9gm5:6 (3.7) BS03 ADP N/A GO:0000727 ... P53091 39824870
    981394 9gm5:6 (3.7) BS04 ADP N/A GO:0000727 ... P53091 39824870
    981395 9gm5:6 (3.7) BS05 ZN N/A GO:0000727 ... P53091 39824870
    981396 9gm5:7 (3.7) BS01 ADP N/A GO:0000727 ... P38132 39824870
    981397 9gm5:7 (3.7) BS02 ZN N/A GO:0000727 ... P38132 39824870
    981398 9gm5:C (3.7) BS01 dna N/A GO:0003677 ... P54790 39824870
    981399 9gm5:C (3.7) BS02 dna N/A GO:0003677 ... P54790 39824870
    981400 9gm5:D (3.7) BS01 dna N/A GO:0000808 ... P54791 39824870

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).