SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    981601 9gmz:C (3.2) BS01 peptide N/A GO:0016887 ... A0ACD6BA40 40103227
    981602 9gmz:C (3.2) BS02 dna N/A GO:0016887 ... A0ACD6BA40 40103227
    981603 9gmz:C (3.2) BS03 ANP N/A GO:0016887 ... A0ACD6BA40 40103227
    981604 9gmz:C (3.2) BS04 ANP N/A GO:0016887 ... A0ACD6BA40 40103227
    981605 9gmz:D (3.2) BS01 peptide N/A GO:0016887 ... A0ACD6BA40 40103227
    981606 9gmz:D (3.2) BS02 ANP N/A GO:0016887 ... A0ACD6BA40 40103227
    981607 9gmz:D (3.2) BS03 ANP N/A GO:0016887 ... A0ACD6BA40 40103227
    981608 9gmz:E (3.2) BS01 peptide N/A GO:0016887 ... A0ACD6BA40 40103227
    981609 9gmz:E (3.2) BS02 ANP N/A GO:0016887 ... A0ACD6BA40 40103227
    981610 9gmz:E (3.2) BS03 ANP N/A GO:0016887 ... A0ACD6BA40 40103227
    981611 9gmz:F (3.2) BS01 peptide N/A GO:0016887 ... A0ACD6BA40 40103227
    981612 9gmz:F (3.2) BS02 ANP N/A GO:0016887 ... A0ACD6BA40 40103227
    981613 9gmz:F (3.2) BS03 ANP N/A GO:0016887 ... A0ACD6BA40 40103227
    981614 9gmz:G (3.2) BS01 ANP N/A GO:0016887 ... A0ACD6BA40 40103227
    981615 9gmz:G (3.2) BS02 ANP N/A GO:0016887 ... A0ACD6BA40 40103227
    981616 9gn1:A (2.35) BS01 ZN N/A GO:0004407 ... A0A377Z5F6 39489725
    981617 9gn2:A (2.41) BS01 CYT N/A GO:0043173 ... Q9R5V5 39691463
    981618 9gn2:A (2.41) BS02 RIB N/A GO:0043173 ... Q9R5V5 39691463
    981619 9gn2:B (2.41) BS01 CYT N/A GO:0043173 ... Q9R5V5 39691463
    981620 9gn4:A (2.48) BS01 CTN N/A GO:0043173 ... Q9R5V5 39691463
    981621 9gn4:A (2.48) BS02 CTN N/A GO:0043173 ... Q9R5V5 39691463
    981622 9gn4:B (2.48) BS01 CTN N/A GO:0043173 ... Q9R5V5 39691463
    981623 9gn4:B (2.48) BS02 CTN N/A GO:0043173 ... Q9R5V5 39691463
    981624 9gn5:A (2.4) BS01 FAD N/A GO:0003995 ... V5RNC8 41084917
    981625 9gn5:A (2.4) BS02 FAD N/A GO:0003995 ... V5RNC8 41084917
    981626 9gn6:A (1.95) BS01 ZN N/A GO:0004407 ... A0A377Z5F6 39489725
    981627 9gn6:A (1.95) BS02 SHH N/A GO:0004407 ... A0A377Z5F6 39489725
    981628 9gn7:A (2.18) BS01 ZN N/A GO:0004407 ... A0A377Z5F6 39489725
    981629 9gn7:A (2.18) BS02 TSN N/A GO:0004407 ... A0A377Z5F6 39489725
    981630 9gnc:A (1.65) BS01 F42 N/A GO:0008726 ... A0A561UC02 40374670
    981631 9gnd:A (1.8) BS01 F42 N/A GO:0008726 ... A0A561UC02 40374670
    981632 9gne:A (3.2) BS01 A1INA N/A GO:0004252 ... P19205 41074793
    981633 9gne:B (3.2) BS01 A1INA N/A GO:0004252 ... P19205 41074793
    981634 9gne:C (3.2) BS01 A1INA N/A GO:0004252 ... P19205 41074793
    981635 9gne:D (3.2) BS01 A1INA N/A GO:0004252 ... P19205 41074793
    981636 9gnf:A (1.31) BS01 PXG N/A GO:0030170 ... A0A7Y6F089 40796981
    981637 9gnf:A (1.31) BS02 CA N/A GO:0030170 ... A0A7Y6F089 40796981
    981638 9gnf:B (1.31) BS01 PXG N/A GO:0030170 ... A0A7Y6F089 40796981
    981639 9gnf:B (1.31) BS02 CA N/A GO:0030170 ... A0A7Y6F089 40796981
    981640 9gnj:A (2.85) BS01 peptide N/A GO:0000159 ... Q13362 N/A
    981641 9gnk:A (1.05) BS01 402 N/A GO:0005506 ... P07598
    P07603
    41756151
    981642 9gnk:A (1.05) BS02 SF4 N/A GO:0005506 ... P07598
    P07603
    41756151
    981643 9gnk:A (1.05) BS03 SF4 N/A GO:0005506 ... P07598
    P07603
    41756151
    981644 9gnk:A (1.05) BS04 SF4 N/A GO:0005506 ... P07598
    P07603
    41756151
    981645 9gnl:A (2.4) BS01 A8S N/A N/A F6HT94 39588706
    981646 9gnl:B (2.4) BS01 A8S N/A N/A F6HT94 39588706
    981647 9gnn:A (2.36) BS01 AYE N/A GO:0006508 ... Q96HI0 40404649
    981648 9gnn:B (2.36) BS01 AYE N/A GO:0006508 ... Q96HI0 40404649
    981649 9gno:A (1.16) BS01 A1INI N/A GO:0000082 ... P24941 40899577
    981650 9gnq:A (2.9) BS01 GTP N/A GO:0000226 ... Q2XVP4 40617823
    981651 9gnq:B (2.9) BS01 GDP N/A GO:0000226 ... P02554 40617823
    981652 9gnq:B (2.9) BS02 TA1 N/A GO:0000226 ... P02554 40617823
    981653 9gnq:K (2.9) BS01 ADP N/A GO:0003777 ... P33176 40617823
    981654 9gnr:C (2.92) BS01 NI N/A GO:0005737 ... P41020 39571870
    981655 9gnr:C (2.92) BS02 NI N/A GO:0005737 ... P41020 39571870
    981656 9gnr:C (2.92) BS03 2PA N/A GO:0005737 ... P41020 39571870
    981657 9gns:A (1.93) BS01 PLP N/A GO:0004058 ... P20711 40401103
    981658 9gns:A (1.93) BS02 142 N/A GO:0004058 ... P20711 40401103
    981659 9gnt:A (1.31) BS01 GLC N/A N/A P10153 N/A
    981660 9gnu:A (2.2) BS01 GTP N/A GO:0000226 ... P81947 N/A
    981661 9gnu:A (2.2) BS02 CA N/A GO:0000226 ... P81947 N/A
    981662 9gnu:B (2.2) BS01 GDP N/A GO:0000226 ... Q6B856 N/A
    981663 9gnu:B (2.2) BS02 A1IND N/A GO:0000226 ... Q6B856 N/A
    981664 9gnu:C (2.2) BS01 GTP N/A GO:0000226 ... P81947 N/A
    981665 9gnu:C (2.2) BS02 CA N/A GO:0000226 ... P81947 N/A
    981666 9gnu:D (2.2) BS01 GTP N/A GO:0000226 ... Q6B856 N/A
    981667 9gnu:D (2.2) BS02 A1IND N/A GO:0000226 ... Q6B856 N/A
    981668 9gnu:F (2.2) BS01 ACP N/A GO:0000226 ... A0A8V0Z8P0 N/A
    981669 9gnu:F (2.2) BS02 MG N/A GO:0000226 ... A0A8V0Z8P0 N/A
    981670 9gnw:A (2.93) BS01 OEX N/A GO:0005506 ... D0FY08 N/A
    981671 9gnw:A (2.93) BS02 FE2 N/A GO:0005506 ... D0FY08 N/A
    981672 9gnw:A (2.93) BS03 CLA N/A GO:0005506 ... D0FY08 N/A
    981673 9gnw:A (2.93) BS04 CLA N/A GO:0005506 ... D0FY08 N/A
    981674 9gnw:A (2.93) BS05 PHO N/A GO:0005506 ... D0FY08 N/A
    981675 9gnw:A (2.93) BS06 CLA N/A GO:0005506 ... D0FY08 N/A
    981676 9gnw:A (2.93) BS07 CLA N/A GO:0005506 ... D0FY08 N/A
    981677 9gnw:A (2.93) BS08 CLA N/A GO:0005506 ... D0FY08 N/A
    981678 9gnw:A (2.93) BS09 PHO N/A GO:0005506 ... D0FY08 N/A
    981679 9gnw:B (2.93) BS01 peptide N/A GO:0009521 ... A0A1C8XRM6 N/A
    981680 9gnw:B (2.93) BS02 CLA N/A GO:0009521 ... A0A1C8XRM6 N/A
    981681 9gnw:B (2.93) BS03 CLA N/A GO:0009521 ... A0A1C8XRM6 N/A
    981682 9gnw:B (2.93) BS04 CLA N/A GO:0009521 ... A0A1C8XRM6 N/A
    981683 9gnw:B (2.93) BS05 CLA N/A GO:0009521 ... A0A1C8XRM6 N/A
    981684 9gnw:B (2.93) BS06 CLA N/A GO:0009521 ... A0A1C8XRM6 N/A
    981685 9gnw:B (2.93) BS07 CLA N/A GO:0009521 ... A0A1C8XRM6 N/A
    981686 9gnw:B (2.93) BS08 CLA N/A GO:0009521 ... A0A1C8XRM6 N/A
    981687 9gnw:B (2.93) BS09 CLA N/A GO:0009521 ... A0A1C8XRM6 N/A
    981688 9gnw:B (2.93) BS10 CLA N/A GO:0009521 ... A0A1C8XRM6 N/A
    981689 9gnw:B (2.93) BS11 CLA N/A GO:0009521 ... A0A1C8XRM6 N/A
    981690 9gnw:B (2.93) BS12 CLA N/A GO:0009521 ... A0A1C8XRM6 N/A
    981691 9gnw:B (2.93) BS13 CLA N/A GO:0009521 ... A0A1C8XRM6 N/A
    981692 9gnw:B (2.93) BS14 CLA N/A GO:0009521 ... A0A1C8XRM6 N/A
    981693 9gnw:B (2.93) BS15 CLA N/A GO:0009521 ... A0A1C8XRM6 N/A
    981694 9gnw:B (2.93) BS16 CLA N/A GO:0009521 ... A0A1C8XRM6 N/A
    981695 9gnw:B (2.93) BS17 CLA N/A GO:0009521 ... A0A1C8XRM6 N/A
    981696 9gnw:B (2.93) BS18 C7Z N/A GO:0009521 ... A0A1C8XRM6 N/A
    981697 9gnw:C (2.93) BS01 OEX N/A GO:0005737 ... D0FXY3 N/A
    981698 9gnw:C (2.93) BS02 CLA N/A GO:0005737 ... D0FXY3 N/A
    981699 9gnw:C (2.93) BS03 CLA N/A GO:0005737 ... D0FXY3 N/A
    981700 9gnw:C (2.93) BS04 CLA N/A GO:0005737 ... D0FXY3 N/A
    981701 9gnw:C (2.93) BS05 CLA N/A GO:0005737 ... D0FXY3 N/A
    981702 9gnw:C (2.93) BS06 CLA N/A GO:0005737 ... D0FXY3 N/A
    981703 9gnw:C (2.93) BS07 CLA N/A GO:0005737 ... D0FXY3 N/A
    981704 9gnw:C (2.93) BS08 CLA N/A GO:0005737 ... D0FXY3 N/A
    981705 9gnw:C (2.93) BS09 CLA N/A GO:0005737 ... D0FXY3 N/A
    981706 9gnw:C (2.93) BS10 CLA N/A GO:0005737 ... D0FXY3 N/A
    981707 9gnw:C (2.93) BS11 CLA N/A GO:0005737 ... D0FXY3 N/A
    981708 9gnw:C (2.93) BS12 CLA N/A GO:0005737 ... D0FXY3 N/A
    981709 9gnw:C (2.93) BS13 CLA N/A GO:0005737 ... D0FXY3 N/A
    981710 9gnw:C (2.93) BS14 CLA N/A GO:0005737 ... D0FXY3 N/A
    981711 9gnw:D (2.93) BS01 FE2 N/A GO:0005506 ... A0A1C8XRK9 N/A
    981712 9gnw:D (2.93) BS02 CLA N/A GO:0005506 ... A0A1C8XRK9 N/A
    981713 9gnw:D (2.93) BS03 CLA N/A GO:0005506 ... A0A1C8XRK9 N/A
    981714 9gnw:D (2.93) BS04 PHO N/A GO:0005506 ... A0A1C8XRK9 N/A
    981715 9gnw:D (2.93) BS05 BCT N/A GO:0005506 ... A0A1C8XRK9 N/A
    981716 9gnw:D (2.93) BS06 CLA N/A GO:0005506 ... A0A1C8XRK9 N/A
    981717 9gnw:D (2.93) BS07 CLA N/A GO:0005506 ... A0A1C8XRK9 N/A
    981718 9gnw:D (2.93) BS08 PHO N/A GO:0005506 ... A0A1C8XRK9 N/A
    981719 9gnw:D (2.93) BS09 CLA N/A GO:0005506 ... A0A1C8XRK9 N/A
    981720 9gnw:D (2.93) BS10 CLA N/A GO:0005506 ... A0A1C8XRK9 N/A
    981721 9gnw:E (2.93) BS01 peptide N/A GO:0005506 ... D0FY01 N/A
    981722 9gnw:E (2.93) BS02 HEM N/A GO:0005506 ... D0FY01 N/A
    981723 9gnw:F (2.93) BS01 HEM N/A GO:0009523 ... A0A1C8XRP4 N/A
    981724 9gnw:H (2.93) BS01 CLA N/A GO:0009523 ... A0A1C8XRP3 N/A
    981725 9gnw:H (2.93) BS02 CLA N/A GO:0009523 ... A0A1C8XRP3 N/A
    981726 9gnw:H (2.93) BS03 CLA N/A GO:0009523 ... A0A1C8XRP3 N/A
    981727 9gnw:H (2.93) BS04 CLA N/A GO:0009523 ... A0A1C8XRP3 N/A
    981728 9gnw:H (2.93) BS05 RRX N/A GO:0009523 ... A0A1C8XRP3 N/A
    981729 9gnw:I (2.93) BS01 CLA N/A GO:0009523 ... D0FXX5 N/A
    981730 9gnw:K (2.93) BS01 CLA N/A GO:0009523 ... D0FXX2 N/A
    981731 9gnw:X (2.93) BS01 CLA N/A GO:0009523 ... A0A7S3VKF3 N/A
    981732 9gnw:Z (2.93) BS01 CLA N/A GO:0009523 ... D0FXZ2 N/A
    981733 9gny:A (1.8) BS01 CFF N/A GO:0004483 ... P0DTD1 N/A
    981734 9gny:A (1.8) BS02 SAM N/A GO:0004483 ... P0DTD1 N/A
    981735 9gny:B (1.8) BS01 ZN N/A GO:0003723 ... P0DTD1 N/A
    981736 9gny:B (1.8) BS02 ZN N/A GO:0003723 ... P0DTD1 N/A
    981737 9go0:A (3.04) BS01 rna N/A N/A A0A8M0FGU0 34759315
    981738 9go0:A (3.04) BS02 dna N/A N/A A0A8M0FGU0 34759315
    981739 9go0:A (3.04) BS03 dna N/A N/A A0A8M0FGU0 34759315
    981740 9go1:A (2.59) BS01 RET N/A GO:0016020 ... Q8RUT8
    Q93WP2
    39680650
    981741 9go2:A (2.7) BS01 RET N/A GO:0016020 ... Q8RUT8
    Q93WP2
    39680650
    981742 9go5:A (2.5) BS01 ADP N/A GO:0000011 ... P60010 39798573
    981743 9go5:B (2.5) BS01 ADP N/A GO:0000011 ... P60010 39798573
    981744 9go5:C (2.5) BS01 ADP N/A GO:0000011 ... P60010 39798573
    981745 9go5:D (2.5) BS01 ADP N/A GO:0000011 ... P60010 39798573
    981746 9go5:E (2.5) BS01 ADP N/A GO:0000011 ... P60010 39798573
    981747 9go7:A (1.04) BS01 GLC N/A N/A P10153 N/A
    981748 9gob:A (3.2) BS01 ADP N/A GO:0000287 ... P68135 39928047
    981749 9gob:B (3.2) BS01 ADP N/A GO:0000287 ... P68135 39928047
    981750 9gob:C (3.2) BS01 peptide N/A GO:0000287 ... P68135 39928047
    981751 9gob:C (3.2) BS02 ADP N/A GO:0000287 ... P68135 39928047
    981752 9gob:D (3.2) BS01 ADP N/A GO:0000287 ... P68135 39928047
    981753 9gob:E (3.2) BS01 ADP N/A GO:0000287 ... P68135 39928047
    981754 9gob:E (3.2) BS02 MG N/A GO:0000287 ... P68135 39928047
    981755 9goc:A (1.89) BS01 A1INE N/A GO:0005515 ... Q86TI2 40180908
    981756 9goc:B (1.89) BS01 A1INE N/A GO:0005515 ... Q86TI2 40180908
    981757 9goc:C (1.89) BS01 A1INE N/A GO:0005515 ... Q86TI2 40180908
    981758 9goc:D (1.89) BS01 A1INE N/A GO:0005515 ... Q86TI2 40180908
    981759 9god:A (2.49) BS01 A1INH N/A GO:0005515 ... Q86TI2 40180908
    981760 9god:B (2.49) BS01 A1INH N/A GO:0005515 ... Q86TI2 40180908
    981761 9god:C (2.49) BS01 A1INH N/A GO:0005515 ... Q86TI2 40180908
    981762 9god:D (2.49) BS01 A1INH N/A GO:0005515 ... Q86TI2 40180908
    981763 9gof:A (1.6) BS01 GLY N/A GO:0030288 ... P73510 39827241
    981764 9gof:B (1.6) BS01 GLY N/A GO:0030288 ... P73510 39827241
    981765 9gof:C (1.6) BS01 GLY N/A GO:0030288 ... P73510 39827241
    981766 9gog:AAA (1.24) BS01 VVB N/A GO:0003796 ... P00698 39642703
    981767 9gog:AAA (1.24) BS02 A1IOM N/A GO:0003796 ... P00698 39642703
    981768 9gog:AAA (1.24) BS03 A1IOM N/A GO:0003796 ... P00698 39642703
    981769 9goh:A (2.38) BS01 A1INF N/A GO:0001618 ... P27487 40180908
    981770 9goh:B (2.38) BS01 A1INF N/A GO:0001618 ... P27487 40180908
    981771 9goi:A (1.89) BS01 BO2 N/A GO:0004252 ... Q93IQ4 40542111
    981772 9goi:A (1.89) BS02 CA N/A GO:0004252 ... Q93IQ4 40542111
    981773 9gok:AAA (1.18) BS01 A1ION N/A GO:0003796 ... P00698 39642703
    981774 9gon:A (1.89) BS01 A1INF N/A GO:0005515 ... Q86TI2 40180908
    981775 9gon:B (1.89) BS01 A1INF N/A GO:0005515 ... Q86TI2 40180908
    981776 9gon:C (1.89) BS01 A1INF N/A GO:0005515 ... Q86TI2 40180908
    981777 9gon:D (1.89) BS01 A1INF N/A GO:0005515 ... Q86TI2 40180908
    981778 9goo:AAA (1.4) BS01 A1IOK N/A GO:0004064 ... P00918 N/A
    981779 9goo:AAA (1.4) BS02 ZN N/A GO:0004064 ... P00918 N/A
    981780 9gop:A (2.158) BS01 A1IOI N/A GO:0000082 ... P24941 40899577
    981781 9gou:A (2.65) BS01 A1ING N/A GO:0004252 ... P19205 41074793
    981782 9gou:B (2.65) BS01 A1ING N/A GO:0004252 ... P19205 41074793
    981783 9gou:C (2.65) BS01 A1ING N/A GO:0004252 ... P19205 41074793
    981784 9gou:D (2.65) BS01 A1ING N/A GO:0004252 ... P19205 41074793
    981785 9gov:A (2.0) BS01 QBF N/A GO:0003824 ... Q0SBK1 39870290
    981786 9gov:A (2.0) BS02 FAD N/A GO:0003824 ... Q0SBK1 39870290
    981787 9gov:B (2.0) BS01 FAD N/A GO:0003824 ... Q0SBK1 39870290
    981788 9gov:B (2.0) BS02 QBF N/A GO:0003824 ... Q0SBK1 39870290
    981789 9gow:A (3.0) BS01 A1IOO N/A GO:0004521 ... O75460 41006348
    981790 9gow:B (3.0) BS01 A1IOO N/A GO:0004521 ... O75460 41006348
    981791 9gow:C (3.0) BS01 A1IOO N/A GO:0004521 ... O75460 41006348
    981792 9gow:D (3.0) BS01 A1IOO N/A GO:0004521 ... O75460 41006348
    981793 9goz:A (1.4) BS01 FAD N/A GO:0003824 ... Q0SBK1 39870290
    981794 9goz:A (1.4) BS02 EOL N/A GO:0003824 ... Q0SBK1 39870290
    981795 9goz:B (1.4) BS01 FAD N/A GO:0003824 ... Q0SBK1 39870290
    981796 9goz:B (1.4) BS02 EOL N/A GO:0003824 ... Q0SBK1 39870290
    981797 9gp0:A (1.75) BS01 FAD N/A GO:0003824 ... Q0SBK1 39870290
    981798 9gp0:A (1.75) BS02 V55 N/A GO:0003824 ... Q0SBK1 39870290
    981799 9gp0:B (1.75) BS01 FAD N/A GO:0003824 ... Q0SBK1 39870290
    981800 9gp0:B (1.75) BS02 V55 N/A GO:0003824 ... Q0SBK1 39870290

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).