SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    982001 9gr1:P (3.17) BS01 rna N/A GO:0000028 ... P0A7T3 39607923
    982002 9gr1:Q (3.17) BS01 rna N/A GO:0000028 ... P0AG63 39607923
    982003 9gr1:R (3.17) BS01 rna N/A GO:0002181 ... P0A7T7 39607923
    982004 9gr1:S (3.17) BS01 rna N/A GO:0002181 ... P0A7U3 39607923
    982005 9gr1:T (3.17) BS01 rna N/A GO:0000028 ... P0A7U7 39607923
    982006 9gr1:U (3.17) BS01 rna N/A GO:0000028 ... P68679 39607923
    982007 9gr1:c (3.17) BS01 rna N/A GO:0000027 ... P60422 39607923
    982008 9gr1:c (3.17) BS02 rna N/A GO:0000027 ... P60422 39607923
    982009 9gr1:d (3.17) BS01 rna N/A GO:0000027 ... P60438 39607923
    982010 9gr1:e (3.17) BS01 rna N/A GO:0001070 ... P60723 39607923
    982011 9gr1:f (3.17) BS01 rna N/A GO:0000027 ... P62399 39607923
    982012 9gr1:f (3.17) BS02 rna N/A GO:0000027 ... P62399 39607923
    982013 9gr1:f (3.17) BS03 rna N/A GO:0000027 ... P62399 39607923
    982014 9gr1:g (3.17) BS01 rna N/A GO:0000027 ... P0AG55 39607923
    982015 9gr1:h (3.17) BS01 rna N/A GO:0002181 ... P0A7R1 39607923
    982016 9gr1:i (3.17) BS01 rna N/A GO:0002181 ... P0AA10 39607923
    982017 9gr1:j (3.17) BS01 rna N/A GO:0002181 ... P0ADY3 39607923
    982018 9gr1:j (3.17) BS02 rna N/A GO:0002181 ... P0ADY3 39607923
    982019 9gr1:k (3.17) BS01 rna N/A GO:0002181 ... P02413 39607923
    982020 9gr1:l (3.17) BS01 rna N/A GO:0000027 ... P0ADY7 39607923
    982021 9gr1:l (3.17) BS02 rna N/A GO:0000027 ... P0ADY7 39607923
    982022 9gr1:m (3.17) BS01 rna N/A GO:0000027 ... P0AG44 39607923
    982023 9gr1:n (3.17) BS01 rna N/A GO:0002181 ... P0C018 39607923
    982024 9gr1:n (3.17) BS02 rna N/A GO:0002181 ... P0C018 39607923
    982025 9gr1:o (3.17) BS01 rna N/A GO:0000027 ... P0A7K6 39607923
    982026 9gr1:o (3.17) BS02 rna N/A GO:0000027 ... P0A7K6 39607923
    982027 9gr1:p (3.17) BS01 rna N/A GO:0000027 ... P0A7L3 39607923
    982028 9gr1:q (3.17) BS01 rna N/A GO:0002181 ... P0AG48 39607923
    982029 9gr1:r (3.17) BS01 rna N/A GO:0002181 ... P61175 39607923
    982030 9gr1:s (3.17) BS01 rna N/A GO:0000027 ... P0ADZ0 39607923
    982031 9gr1:t (3.17) BS01 rna N/A GO:0000027 ... P60624 39607923
    982032 9gr1:u (3.17) BS01 rna N/A GO:0000027 ... P68919 39607923
    982033 9gr1:v (3.17) BS01 rna N/A GO:0000027 ... P0A7L8 39607923
    982034 9gr1:v (3.17) BS02 rna N/A GO:0000027 ... P0A7L8 39607923
    982035 9gr1:w (3.17) BS01 rna N/A GO:0000027 ... P0A7M2 39607923
    982036 9gr1:x (3.17) BS01 rna N/A GO:0000027 ... P0A7M6 39607923
    982037 9gr1:y (3.17) BS01 rna N/A GO:0000027 ... P0AG51 39607923
    982038 9gr1:y (3.17) BS02 rna N/A GO:0000027 ... P0AG51 39607923
    982039 9gr1:z (3.17) BS01 rna N/A GO:0000027 ... P0A7N4 39607923
    982040 9gr3:A (1.19) BS01 T3Y N/A N/A A0AAP7ZHZ3 39977527
    982041 9gr3:A (1.19) BS02 BDF N/A N/A A0AAP7ZHZ3 39977527
    982042 9gr3:A (1.19) BS03 BDF N/A N/A A0AAP7ZHZ3 39977527
    982043 9gr3:A (1.19) BS04 BDF N/A N/A A0AAP7ZHZ3 39977527
    982044 9gr3:B (1.19) BS01 BDF N/A N/A A0AAP7ZHZ3 39977527
    982045 9gr3:B (1.19) BS02 BDF N/A N/A A0AAP7ZHZ3 39977527
    982046 9gr3:B (1.19) BS03 BDF N/A N/A A0AAP7ZHZ3 39977527
    982047 9gr3:C (1.19) BS01 BDF N/A N/A A0AAP7ZHZ3 39977527
    982048 9gr3:C (1.19) BS02 BDF N/A N/A A0AAP7ZHZ3 39977527
    982049 9gr3:C (1.19) BS03 BDF N/A N/A A0AAP7ZHZ3 39977527
    982050 9gr4:A (1.08) BS01 BDF N/A N/A A0AAP7ZHZ3 39977527
    982051 9gr4:A (1.08) BS02 BDF N/A N/A A0AAP7ZHZ3 39977527
    982052 9gr4:A (1.08) BS03 BDF N/A N/A A0AAP7ZHZ3 39977527
    982053 9gr4:B (1.08) BS01 BDF N/A N/A A0AAP7ZHZ3 39977527
    982054 9gr4:B (1.08) BS02 BDF N/A N/A A0AAP7ZHZ3 39977527
    982055 9gr4:B (1.08) BS03 BDF N/A N/A A0AAP7ZHZ3 39977527
    982056 9gr4:C (1.08) BS01 T3Y N/A N/A A0AAP7ZHZ3 39977527
    982057 9gr4:C (1.08) BS02 BDF N/A N/A A0AAP7ZHZ3 39977527
    982058 9gr4:C (1.08) BS03 BDF N/A N/A A0AAP7ZHZ3 39977527
    982059 9gr4:C (1.08) BS04 BDF N/A N/A A0AAP7ZHZ3 39977527
    982060 9gr4:D (1.08) BS01 BDF N/A N/A A0AAP7ZHZ3 39977527
    982061 9gr4:D (1.08) BS02 BDF N/A N/A A0AAP7ZHZ3 39977527
    982062 9gr4:D (1.08) BS03 BDF N/A N/A A0AAP7ZHZ3 39977527
    982063 9gr4:E (1.08) BS01 BDF N/A N/A A0AAP7ZHZ3 39977527
    982064 9gr4:E (1.08) BS02 BDF N/A N/A A0AAP7ZHZ3 39977527
    982065 9gr4:E (1.08) BS03 BDF N/A N/A A0AAP7ZHZ3 39977527
    982066 9gr4:F (1.08) BS01 BDF N/A N/A A0AAP7ZHZ3 39977527
    982067 9gr4:F (1.08) BS02 BDF N/A N/A A0AAP7ZHZ3 39977527
    982068 9gr4:F (1.08) BS03 BDF N/A N/A A0AAP7ZHZ3 39977527
    982069 9gr5:A (1.32) BS01 BDF N/A N/A A0AAP7ZHZ3 39977527
    982070 9gr5:A (1.32) BS02 BDF N/A N/A A0AAP7ZHZ3 39977527
    982071 9gr5:A (1.32) BS03 T3Y N/A N/A A0AAP7ZHZ3 39977527
    982072 9gr5:A (1.32) BS04 BDF N/A N/A A0AAP7ZHZ3 39977527
    982073 9gr5:B (1.32) BS01 BDF N/A N/A A0AAP7ZHZ3 39977527
    982074 9gr5:B (1.32) BS02 BDF N/A N/A A0AAP7ZHZ3 39977527
    982075 9gr5:B (1.32) BS03 BDF N/A N/A A0AAP7ZHZ3 39977527
    982076 9gr5:C (1.32) BS01 BDF N/A N/A A0AAP7ZHZ3 39977527
    982077 9gr5:C (1.32) BS02 BDF N/A N/A A0AAP7ZHZ3 39977527
    982078 9gr5:C (1.32) BS03 BDF N/A N/A A0AAP7ZHZ3 39977527
    982079 9gr6:A (0.93) BS01 SAH N/A GO:0005634 ... P0DPA9 40170967
    982080 9gr7:A (1.04) BS01 SFG N/A GO:0005634 ... P0DPA9 40170967
    982081 9gr8:A (1.18) BS01 ADP N/A GO:0000829 ... Q06685 39966396
    982082 9grb:B (2.55) BS01 FUC N/A GO:0005783 ... Q6PDB7 N/A
    982083 9grc:C (3.5) BS01 Z41 N/A GO:0005515 ... P0ADC3 39725716
    982084 9grc:E (3.5) BS01 peptide N/A GO:0005515 ... P75958 39725716
    982085 9grd:A (1.99) BS01 CO N/A GO:0000287 ... P24300 N/A
    982086 9grd:A (1.99) BS02 CO N/A GO:0000287 ... P24300 N/A
    982087 9grd:B (1.99) BS01 CO N/A GO:0000287 ... P24300 N/A
    982088 9grd:B (1.99) BS02 CO N/A GO:0000287 ... P24300 N/A
    982089 9grd:C (1.99) BS01 CO N/A GO:0000287 ... P24300 N/A
    982090 9grd:C (1.99) BS02 CO N/A GO:0000287 ... P24300 N/A
    982091 9grd:D (1.99) BS01 CO N/A GO:0000287 ... P24300 N/A
    982092 9grd:D (1.99) BS02 CO N/A GO:0000287 ... P24300 N/A
    982093 9gre:A (2.0) BS01 MG N/A GO:0000287 ... P24300 N/A
    982094 9gre:A (2.0) BS02 MG N/A GO:0000287 ... P24300 N/A
    982095 9gre:B (2.0) BS01 MG N/A GO:0000287 ... P24300 N/A
    982096 9gre:B (2.0) BS02 MG N/A GO:0000287 ... P24300 N/A
    982097 9gre:C (2.0) BS01 MG N/A GO:0000287 ... P24300 N/A
    982098 9gre:C (2.0) BS02 MG N/A GO:0000287 ... P24300 N/A
    982099 9gre:D (2.0) BS01 MG N/A GO:0000287 ... P24300 N/A
    982100 9gre:D (2.0) BS02 MG N/A GO:0000287 ... P24300 N/A
    982101 9grf:A (1.14) BS01 peptide N/A N/A O82882 41083434
    982102 9grg:A (1.89) BS01 CA N/A GO:0004252 ... Q93IQ4 40542111
    982103 9grh:A (3.2) BS01 ZN N/A GO:0000829 ... Q06685 39966396
    982104 9grh:B (3.2) BS01 ZN N/A GO:0000829 ... Q06685 39966396
    982105 9grh:C (3.2) BS01 ZN N/A GO:0000829 ... Q06685 39966396
    982106 9grh:D (3.2) BS01 ZN N/A GO:0000829 ... Q06685 39966396
    982107 9grj:A (1.2) BS01 peptide N/A N/A O82882 41083434
    982108 9grm:A (-1.00) BS01 peptide N/A GO:0000139 ... P60953 41566164
    982109 9grm:A (-1.00) BS02 GNP N/A GO:0000139 ... P60953 41566164
    982110 9grm:A (-1.00) BS03 MG N/A GO:0000139 ... P60953 41566164
    982111 9grn:A (3.4) BS01 ZN N/A GO:0000829 ... Q06685 39966396
    982112 9grn:A (3.4) BS02 ZN N/A GO:0000829 ... Q06685 39966396
    982113 9grn:B (3.4) BS01 LPC N/A GO:0000829 ... Q06685 39966396
    982114 9grn:B (3.4) BS02 ZN N/A GO:0000829 ... Q06685 39966396
    982115 9grn:B (3.4) BS03 ZN N/A GO:0000829 ... Q06685 39966396
    982116 9grn:C (3.4) BS01 ZN N/A GO:0000829 ... Q06685 39966396
    982117 9grn:C (3.4) BS02 ZN N/A GO:0000829 ... Q06685 39966396
    982118 9grn:D (3.4) BS01 ZN N/A GO:0000829 ... Q06685 39966396
    982119 9grn:D (3.4) BS02 ZN N/A GO:0000829 ... Q06685 39966396
    982120 9gro:A (2.36) BS01 ZN N/A GO:0000829 ... Q06685 39966396
    982121 9gro:A (2.36) BS02 I8P N/A GO:0000829 ... Q06685 39966396
    982122 9gro:B (2.36) BS01 ZN N/A GO:0000829 ... Q06685 39966396
    982123 9gro:B (2.36) BS02 1JW N/A GO:0000829 ... Q06685 39966396
    982124 9gro:B (2.36) BS03 1JW N/A GO:0000829 ... Q06685 39966396
    982125 9gro:B (2.36) BS04 I8P N/A GO:0000829 ... Q06685 39966396
    982126 9grp:A (2.1) BS01 SAM N/A GO:0004483 ... P0DTD1 N/A
    982127 9grp:A (2.1) BS02 A1IOQ N/A GO:0004483 ... P0DTD1 N/A
    982128 9grp:B (2.1) BS01 ZN N/A GO:0003723 ... P0DTD1 N/A
    982129 9grp:B (2.1) BS02 ZN N/A GO:0003723 ... P0DTD1 N/A
    982130 9grq:A (1.85) BS01 TEP N/A GO:0004483 ... P0DTD1 N/A
    982131 9grq:A (1.85) BS02 SAM N/A GO:0004483 ... P0DTD1 N/A
    982132 9grq:B (1.85) BS01 ZN N/A GO:0003723 ... P0DTD1 N/A
    982133 9grq:B (1.85) BS02 ZN N/A GO:0003723 ... P0DTD1 N/A
    982134 9grr:AaA (1.4) BS01 A1IOW N/A GO:0006633 ... Q42561 N/A
    982135 9grs:A (1.66) BS01 A1H6Y N/A N/A Q7Z4V5 39461037
    982136 9grs:B (1.66) BS01 A1H6Y N/A N/A Q7Z4V5 39461037
    982137 9grt:A (1.64) BS01 BYZ N/A N/A Q7Z4V5 39461037
    982138 9grt:C (1.64) BS01 BYZ N/A N/A Q7Z4V5 39461037
    982139 9gru:A (1.7) BS01 PYZ N/A N/A Q7Z4V5 39461037
    982140 9gru:B (1.7) BS01 PYZ N/A N/A Q7Z4V5 39461037
    982141 9gru:C (1.7) BS01 PYZ N/A N/A Q7Z4V5 39461037
    982142 9grv:A (1.55) BS01 HHN N/A N/A Q7Z4V5 39461037
    982143 9grw:A (1.85) BS01 CA N/A N/A E5WZ15 N/A
    982144 9grw:B (1.85) BS01 CA N/A N/A E5WZ15 N/A
    982145 9grx:5 (3.19) BS01 A1H1M N/A GO:0006979 ... A0A9R0JS52 39856350
    982146 9grx:F (3.19) BS01 A1H1M N/A GO:0003954 ... Q9M3J4 39856350
    982147 9grx:F (3.19) BS02 A1H1M N/A GO:0003954 ... Q9M3J4 39856350
    982148 9grx:I (3.19) BS01 SF4 N/A GO:0005506 ... Q9M3I7 39856350
    982149 9grx:I (3.19) BS02 SF4 N/A GO:0005506 ... Q9M3I7 39856350
    982150 9grx:K (3.19) BS01 SF4 N/A GO:0008137 ... Q9M3M0 39856350
    982151 9grx:a (3.19) BS01 CLA N/A GO:0000287 ... P06511 39856350
    982152 9grx:a (3.19) BS02 CLA N/A GO:0000287 ... P06511 39856350
    982153 9grx:a (3.19) BS03 CL0 N/A GO:0000287 ... P06511 39856350
    982154 9grx:a (3.19) BS04 CLA N/A GO:0000287 ... P06511 39856350
    982155 9grx:a (3.19) BS05 CLA N/A GO:0000287 ... P06511 39856350
    982156 9grx:a (3.19) BS06 CLA N/A GO:0000287 ... P06511 39856350
    982157 9grx:a (3.19) BS07 CLA N/A GO:0000287 ... P06511 39856350
    982158 9grx:a (3.19) BS08 CLA N/A GO:0000287 ... P06511 39856350
    982159 9grx:a (3.19) BS09 CLA N/A GO:0000287 ... P06511 39856350
    982160 9grx:a (3.19) BS10 CLA N/A GO:0000287 ... P06511 39856350
    982161 9grx:a (3.19) BS11 CLA N/A GO:0000287 ... P06511 39856350
    982162 9grx:a (3.19) BS12 CLA N/A GO:0000287 ... P06511 39856350
    982163 9grx:a (3.19) BS13 CLA N/A GO:0000287 ... P06511 39856350
    982164 9grx:a (3.19) BS14 CLA N/A GO:0000287 ... P06511 39856350
    982165 9grx:a (3.19) BS15 CLA N/A GO:0000287 ... P06511 39856350
    982166 9grx:a (3.19) BS16 CLA N/A GO:0000287 ... P06511 39856350
    982167 9grx:a (3.19) BS17 CLA N/A GO:0000287 ... P06511 39856350
    982168 9grx:a (3.19) BS18 CLA N/A GO:0000287 ... P06511 39856350
    982169 9grx:a (3.19) BS19 PQN N/A GO:0000287 ... P06511 39856350
    982170 9grx:a (3.19) BS20 CLA N/A GO:0000287 ... P06511 39856350
    982171 9grx:a (3.19) BS21 SF4 N/A GO:0000287 ... P06511 39856350
    982172 9grx:a (3.19) BS22 CLA N/A GO:0000287 ... P06511 39856350
    982173 9grx:a (3.19) BS23 CLA N/A GO:0000287 ... P06511 39856350
    982174 9grx:a (3.19) BS24 CLA N/A GO:0000287 ... P06511 39856350
    982175 9grx:a (3.19) BS25 CLA N/A GO:0000287 ... P06511 39856350
    982176 9grx:a (3.19) BS26 CLA N/A GO:0000287 ... P06511 39856350
    982177 9grx:a (3.19) BS27 CLA N/A GO:0000287 ... P06511 39856350
    982178 9grx:a (3.19) BS28 CLA N/A GO:0000287 ... P06511 39856350
    982179 9grx:a (3.19) BS29 CLA N/A GO:0000287 ... P06511 39856350
    982180 9grx:a (3.19) BS30 CLA N/A GO:0000287 ... P06511 39856350
    982181 9grx:a (3.19) BS31 CLA N/A GO:0000287 ... P06511 39856350
    982182 9grx:a (3.19) BS32 CLA N/A GO:0000287 ... P06511 39856350
    982183 9grx:a (3.19) BS33 CLA N/A GO:0000287 ... P06511 39856350
    982184 9grx:a (3.19) BS34 CLA N/A GO:0000287 ... P06511 39856350
    982185 9grx:a (3.19) BS35 CLA N/A GO:0000287 ... P06511 39856350
    982186 9grx:a (3.19) BS36 CLA N/A GO:0000287 ... P06511 39856350
    982187 9grx:a (3.19) BS37 CLA N/A GO:0000287 ... P06511 39856350
    982188 9grx:a (3.19) BS38 CLA N/A GO:0000287 ... P06511 39856350
    982189 9grx:a (3.19) BS39 CLA N/A GO:0000287 ... P06511 39856350
    982190 9grx:a (3.19) BS40 CLA N/A GO:0000287 ... P06511 39856350
    982191 9grx:a (3.19) BS41 CLA N/A GO:0000287 ... P06511 39856350
    982192 9grx:a (3.19) BS42 CLA N/A GO:0000287 ... P06511 39856350
    982193 9grx:a (3.19) BS43 CLA N/A GO:0000287 ... P06511 39856350
    982194 9grx:a (3.19) BS44 CLA N/A GO:0000287 ... P06511 39856350
    982195 9grx:a (3.19) BS45 CLA N/A GO:0000287 ... P06511 39856350
    982196 9grx:a (3.19) BS46 CLA N/A GO:0000287 ... P06511 39856350
    982197 9grx:a (3.19) BS47 CLA N/A GO:0000287 ... P06511 39856350
    982198 9grx:a (3.19) BS48 CLA N/A GO:0000287 ... P06511 39856350
    982199 9grx:a (3.19) BS49 CLA N/A GO:0000287 ... P06511 39856350
    982200 9grx:a (3.19) BS50 CLA N/A GO:0000287 ... P06511 39856350

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).