SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    982401 9gsd:A (3.04) BS02 KXP N/A GO:0000166 ... Q9R0K7 40836084
    982402 9gsd:A (3.04) BS03 BEF N/A GO:0000166 ... Q9R0K7 40836084
    982403 9gse:A (3.64) BS01 KXP N/A GO:0000166 ... Q9R0K7 40836084
    982404 9gsf:A (3.35) BS01 ANP N/A GO:0000166 ... Q9R0K7 40836084
    982405 9gsf:A (3.35) BS02 KXP N/A GO:0000166 ... Q9R0K7 40836084
    982406 9gsg:A (2.83) BS01 ALF N/A GO:0000166 ... Q9R0K7 40836084
    982407 9gsg:A (2.83) BS02 MG N/A GO:0000166 ... Q9R0K7 40836084
    982408 9gsh:A (3.13) BS01 ANP N/A GO:0000166 ... Q9R0K7 40836084
    982409 9gsh:A (3.13) BS02 CA N/A GO:0000166 ... Q9R0K7 40836084
    982410 9gsh:A (3.13) BS03 KXP N/A GO:0000166 ... Q9R0K7 40836084
    982411 9gsi:A (3.39) BS01 ANP N/A GO:0000166 ... Q9R0K7 40836084
    982412 9gsi:A (3.39) BS02 CA N/A GO:0000166 ... Q9R0K7 40836084
    982413 9gsi:A (3.39) BS03 KXP N/A GO:0000166 ... Q9R0K7 40836084
    982414 9gsj:B (3.6) BS01 HT1 N/A GO:0005524 ... O06967 39966360
    982415 9gsj:B (3.6) BS02 HT1 N/A GO:0005524 ... O06967 39966360
    982416 9gsk:A (1.3) BS01 CU1 N/A N/A A0A0M3KL60 N/A
    982417 9gsk:A (1.3) BS02 CU1 N/A N/A A0A0M3KL60 N/A
    982418 9gsk:A (1.3) BS03 CU1 N/A N/A A0A0M3KL60 N/A
    982419 9gsk:A (1.3) BS04 CU1 N/A N/A A0A0M3KL60 N/A
    982420 9gsk:A (1.3) BS05 CU1 N/A N/A A0A0M3KL60 N/A
    982421 9gsk:A (1.3) BS06 CU1 N/A N/A A0A0M3KL60 N/A
    982422 9gsk:A (1.3) BS07 CU1 N/A N/A A0A0M3KL60 N/A
    982423 9gsk:A (1.3) BS08 CU1 N/A N/A A0A0M3KL60 N/A
    982424 9gsk:A (1.3) BS09 CU1 N/A N/A A0A0M3KL60 N/A
    982425 9gsk:A (1.3) BS10 CU1 N/A N/A A0A0M3KL60 N/A
    982426 9gsk:A (1.3) BS11 CU1 N/A N/A A0A0M3KL60 N/A
    982427 9gsk:A (1.3) BS12 CU1 N/A N/A A0A0M3KL60 N/A
    982428 9gsk:B (1.3) BS01 CU1 N/A N/A A0A0M3KL60 N/A
    982429 9gsk:B (1.3) BS02 CU1 N/A N/A A0A0M3KL60 N/A
    982430 9gsk:B (1.3) BS03 CU1 N/A N/A A0A0M3KL60 N/A
    982431 9gsk:B (1.3) BS04 CU1 N/A N/A A0A0M3KL60 N/A
    982432 9gsk:B (1.3) BS05 CU1 N/A N/A A0A0M3KL60 N/A
    982433 9gsk:B (1.3) BS06 CU1 N/A N/A A0A0M3KL60 N/A
    982434 9gsk:B (1.3) BS07 CU1 N/A N/A A0A0M3KL60 N/A
    982435 9gsk:B (1.3) BS08 CU1 N/A N/A A0A0M3KL60 N/A
    982436 9gsk:B (1.3) BS09 CU1 N/A N/A A0A0M3KL60 N/A
    982437 9gsk:B (1.3) BS10 CU1 N/A N/A A0A0M3KL60 N/A
    982438 9gsk:B (1.3) BS11 CU1 N/A N/A A0A0M3KL60 N/A
    982439 9gsk:B (1.3) BS12 CU1 N/A N/A A0A0M3KL60 N/A
    982440 9gsm:A (1.75) BS01 peptide N/A N/A O82882 41083434
    982441 9gsm:A (1.75) BS02 GAL N/A N/A O82882 41083434
    982442 9gsm:B (1.75) BS01 peptide N/A N/A O82882 41083434
    982443 9gsm:B (1.75) BS02 GAL N/A N/A O82882 41083434
    982444 9gsn:A (2.58) BS01 AGS N/A GO:0005524 ... P32839 40410623
    982445 9gsn:A (2.58) BS02 AGS N/A GO:0005524 ... P32839 40410623
    982446 9gsn:B (2.58) BS01 AGS N/A GO:0005524 ... P32839 40410623
    982447 9gsn:B (2.58) BS02 AGS N/A GO:0005524 ... P32839 40410623
    982448 9gsn:C (2.58) BS01 AGS N/A GO:0005524 ... P32839 40410623
    982449 9gsn:C (2.58) BS02 AGS N/A GO:0005524 ... P32839 40410623
    982450 9gsn:D (2.58) BS01 AGS N/A GO:0005524 ... P32839 40410623
    982451 9gsn:E (2.58) BS01 AGS N/A GO:0005524 ... P32839 40410623
    982452 9gsn:F (2.58) BS01 AGS N/A GO:0005524 ... P32839 40410623
    982453 9gsn:F (2.58) BS02 AGS N/A GO:0005524 ... P32839 40410623
    982454 9gsn:G (2.58) BS01 AGS N/A GO:0005524 ... P32839 40410623
    982455 9gsn:G (2.58) BS02 AGS N/A GO:0005524 ... P32839 40410623
    982456 9gsr:A (1.25) BS01 UDP N/A N/A K5B7Z4 N/A
    982457 9gsr:B (1.25) BS01 UDP N/A N/A K5B7Z4 N/A
    982458 9gss:A (1.97) BS01 GTX 2.5.1.18 GO:0000122 ... P09211 9398518
    982459 9gss:B (1.97) BS01 GTX 2.5.1.18 GO:0000122 ... P09211 9398518
    982460 9gsu:A (2.36) BS01 MN N/A GO:0004722 ... A0A7J7RZV7 40548551
    982461 9gsu:A (2.36) BS02 MN N/A GO:0004722 ... A0A7J7RZV7 40548551
    982462 9gsu:D (2.36) BS01 MN N/A GO:0004722 ... A0A7J7RZV7 40548551
    982463 9gsu:D (2.36) BS02 MN N/A GO:0004722 ... A0A7J7RZV7 40548551
    982464 9gsv:A (1.8) BS01 A1IO6 N/A GO:0004553 ... P10253 40951993
    982465 9gsw:A (1.95) BS01 A1IO5 N/A GO:0004553 ... P10253 40951993
    982466 9gsy:A (3.52) BS01 BEF N/A GO:0000166 ... Q9R0K7 40836084
    982467 9gsy:A (3.52) BS02 MG N/A GO:0000166 ... Q9R0K7 40836084
    982468 9gsy:A (3.52) BS03 KXP N/A GO:0000166 ... Q9R0K7 40836084
    982469 9gsz:A (3.8) BS01 T44 N/A GO:0003333 ... Q8TF71 40368961
    982470 9gt0:A (1.67) BS01 HEM N/A GO:0004601 ... A0A7U9DT46 41081786
    982471 9gt0:B (1.67) BS01 HEM N/A GO:0004601 ... A0A7U9DT46 41081786
    982472 9gt1:A (1.67) BS01 HEM N/A GO:0004601 ... A0A7U9DT46 N/A
    982473 9gt1:B (1.67) BS01 HEM N/A GO:0004601 ... A0A7U9DT46 N/A
    982474 9gt2:A (1.6) BS01 HEM N/A GO:0004601 ... A0A7U9DT46 N/A
    982475 9gt2:B (1.6) BS01 HEM N/A GO:0004601 ... A0A7U9DT46 N/A
    982476 9gt3:A (1.67) BS01 HEM N/A GO:0004601 ... A0A7U9DT46 N/A
    982477 9gt3:B (1.67) BS01 HEM N/A GO:0004601 ... A0A7U9DT46 N/A
    982478 9gt4:A (1.67) BS01 HEM N/A GO:0004601 ... A0A7U9DT46 N/A
    982479 9gt4:B (1.67) BS01 HEM N/A GO:0004601 ... A0A7U9DT46 N/A
    982480 9gt5:A (1.63) BS01 HEM N/A GO:0004601 ... A0A7U9DT46 N/A
    982481 9gt5:B (1.63) BS01 HEM N/A GO:0004601 ... A0A7U9DT46 N/A
    982482 9gt6:A (1.57) BS01 HEM N/A GO:0004601 ... A0A7U9DT46 N/A
    982483 9gt6:B (1.57) BS01 HEM N/A GO:0004601 ... A0A7U9DT46 N/A
    982484 9gt7:A (1.67) BS01 HEM N/A GO:0004601 ... A0A7U9DT46 N/A
    982485 9gt7:B (1.67) BS01 HEM N/A GO:0004601 ... A0A7U9DT46 N/A
    982486 9gt8:A (1.54) BS01 HEM N/A GO:0004601 ... A0A7U9DT46 N/A
    982487 9gt8:B (1.54) BS01 HEM N/A GO:0004601 ... A0A7U9DT46 N/A
    982488 9gtb:A (3.5) BS01 CA N/A GO:0000166 ... Q9R0K7 40836084
    982489 9gtb:A (3.5) BS02 KXP N/A GO:0000166 ... Q9R0K7 40836084
    982490 9gtc:A (2.58) BS01 A1IO7 N/A GO:0004553 ... P10253 40951993
    982491 9gtd:A (2.25) BS01 A1IO8 N/A GO:0004553 ... P10253 40951993
    982492 9gte:B (1.3) BS01 SVR N/A N/A Q62191 39955622
    982493 9gtf:A (2.28) BS01 SAM N/A GO:0004483 ... P0DTD1 N/A
    982494 9gtf:A (2.28) BS02 A1IOV N/A GO:0004483 ... P0DTD1 N/A
    982495 9gtf:B (2.28) BS01 ZN N/A GO:0003723 ... P0DTD1 N/A
    982496 9gtf:B (2.28) BS02 ZN N/A GO:0003723 ... P0DTD1 N/A
    982497 9gtg:A (2.25) BS01 RCM N/A GO:0004672 ... Q13546 40539767
    982498 9gtg:A (2.25) BS02 A1IPG N/A GO:0004672 ... Q13546 40539767
    982499 9gtg:B (2.25) BS01 A1IPG N/A GO:0004672 ... Q13546 40539767
    982500 9gtg:B (2.25) BS02 RCM N/A GO:0004672 ... Q13546 40539767
    982501 9gtj:A (0.99) BS01 HEM N/A GO:0016491 ... A4VPS8 40458033
    982502 9gtj:B (0.99) BS01 HEM N/A GO:0016491 ... A4VPS8 40458033
    982503 9gtk:A (2.0) BS01 MG N/A GO:0000139 ... P01116 40517320
    982504 9gtk:A (2.0) BS02 GNP N/A GO:0000139 ... P01116 40517320
    982505 9gtk:C (2.0) BS01 GNP N/A GO:0000139 ... P01116 40517320
    982506 9gtk:D (2.0) BS01 GNP N/A GO:0000139 ... P01116 40517320
    982507 9gtk:H (2.0) BS01 MG N/A N/A N/A 40517320
    982508 9gtl:A (2.0) BS01 A1IO9 N/A GO:0004553 ... P10253 40951993
    982509 9gtn:A (1.8) BS01 A1IPA N/A GO:0004553 ... P10253 40951993
    982510 9gto:B (2.3) BS01 CA N/A GO:0005245 ... P62166 41211723
    982511 9gto:B (2.3) BS02 CA N/A GO:0005245 ... P62166 41211723
    982512 9gto:B (2.3) BS03 CA N/A GO:0005245 ... P62166 41211723
    982513 9gto:B (2.3) BS04 A1IPH N/A GO:0005245 ... P62166 41211723
    982514 9gtt:A (2.35) BS01 A1IPB N/A GO:0004553 ... P10253 40951993
    982515 9gtu:B (3.14) BS01 peptide N/A N/A P12110 40813585
    982516 9gtu:C (3.14) BS01 peptide N/A N/A P12111 40813585
    982517 9gtw:A (1.75) BS01 A1IPC N/A GO:0004553 ... P10253 40951993
    982518 9gty:A (2.145) BS01 RCM N/A GO:0004672 ... Q13546 40539767
    982519 9gty:B (2.145) BS01 RCM N/A GO:0004672 ... Q13546 40539767
    982520 9gty:B (2.145) BS02 A1IKX N/A GO:0004672 ... Q13546 40539767
    982521 9gu0:I (2.96) BS01 MAN N/A GO:0005515 ... P60615 40252219
    982522 9gu1:I (2.48) BS01 MAN N/A GO:0005515 ... P60615 40252219
    982523 9gu1:I (2.48) BS02 MAN N/A GO:0005515 ... P60615 40252219
    982524 9gu1:J (2.48) BS01 MAN N/A GO:0005515 ... P60615 40252219
    982525 9gu1:L (2.48) BS01 CU N/A GO:0003009 ... P02708 40252219
    982526 9gu2:A (2.73) BS01 ACH N/A GO:0003009 ... P02708 40252219
    982527 9gu2:D (2.73) BS01 ACH N/A GO:0003009 ... Q07001 40252219
    982528 9gu2:E (2.73) BS01 ACH N/A GO:0004888 ... Q04844 40252219
    982529 9gu2:L (2.73) BS01 ACH N/A GO:0003009 ... P02708 40252219
    982530 9gu2:L (2.73) BS02 CU N/A GO:0003009 ... P02708 40252219
    982531 9gu3:A (2.64) BS01 ACH N/A GO:0003009 ... P02708 40252219
    982532 9gu3:D (2.64) BS01 ACH N/A GO:0003009 ... Q07001 40252219
    982533 9gu3:E (2.64) BS01 ACH N/A GO:0004888 ... Q04844 40252219
    982534 9gu3:L (2.64) BS01 ACH N/A GO:0003009 ... P02708 40252219
    982535 9gu4:A (2.696) BS01 A1IPJ N/A N/A Q96P20 39574318
    982536 9gu4:A (2.696) BS02 ADP N/A N/A Q96P20 39574318
    982537 9gu5:A (2.9) BS01 rna N/A GO:0000049 ... P0A6X3 39868539
    982538 9gu5:C (2.9) BS01 rna N/A GO:0000049 ... P0A6X3 39868539
    982539 9gu5:D (2.9) BS01 rna N/A GO:0000049 ... P0A6X3 39868539
    982540 9gu5:G (2.9) BS01 rna N/A GO:0000049 ... P0A6X3 39868539
    982541 9gu6:B (1.93) BS01 CA N/A GO:0005245 ... P62166 41211723
    982542 9gu6:B (1.93) BS02 CA N/A GO:0005245 ... P62166 41211723
    982543 9gu6:B (1.93) BS03 CA N/A GO:0005245 ... P62166 41211723
    982544 9gu6:B (1.93) BS04 117 N/A GO:0005245 ... P62166 41211723
    982545 9gu6:B (1.93) BS05 117 N/A GO:0005245 ... P62166 41211723
    982546 9gu6:D (1.93) BS01 CA N/A GO:0005245 ... P62166 41211723
    982547 9gu6:D (1.93) BS02 CA N/A GO:0005245 ... P62166 41211723
    982548 9gu6:D (1.93) BS03 CA N/A GO:0005245 ... P62166 41211723
    982549 9gu6:D (1.93) BS04 117 N/A GO:0005245 ... P62166 41211723
    982550 9gu6:D (1.93) BS05 117 N/A GO:0005245 ... P62166 41211723
    982551 9gu6:F (1.93) BS01 CA N/A GO:0005245 ... P62166 41211723
    982552 9gu6:F (1.93) BS02 CA N/A GO:0005245 ... P62166 41211723
    982553 9gu6:F (1.93) BS03 CA N/A GO:0005245 ... P62166 41211723
    982554 9gu6:F (1.93) BS04 117 N/A GO:0005245 ... P62166 41211723
    982555 9gu6:H (1.93) BS01 CA N/A GO:0005245 ... P62166 41211723
    982556 9gu6:H (1.93) BS02 CA N/A GO:0005245 ... P62166 41211723
    982557 9gu6:H (1.93) BS03 CA N/A GO:0005245 ... P62166 41211723
    982558 9gu6:H (1.93) BS04 117 N/A GO:0005245 ... P62166 41211723
    982559 9gu7:AAA (1.35) BS01 A1IOX N/A GO:0004064 ... P00918 39811134
    982560 9gu7:AAA (1.35) BS02 ZN N/A GO:0004064 ... P00918 39811134
    982561 9gu8:B (1.67) BS01 CA N/A GO:0005245 ... P62166 41211723
    982562 9gu8:B (1.67) BS02 CA N/A GO:0005245 ... P62166 41211723
    982563 9gu8:B (1.67) BS03 CA N/A GO:0005245 ... P62166 41211723
    982564 9gu8:B (1.67) BS04 YG7 N/A GO:0005245 ... P62166 41211723
    982565 9gu9:A (2.74) BS01 AGS N/A GO:0005524 ... P32839 40410623
    982566 9gu9:A (2.74) BS02 AGS N/A GO:0005524 ... P32839 40410623
    982567 9gu9:B (2.74) BS01 AGS N/A GO:0005524 ... P32839 40410623
    982568 9gu9:B (2.74) BS02 AGS N/A GO:0005524 ... P32839 40410623
    982569 9gu9:C (2.74) BS01 AGS N/A GO:0005524 ... P32839 40410623
    982570 9gu9:C (2.74) BS02 AGS N/A GO:0005524 ... P32839 40410623
    982571 9gu9:D (2.74) BS01 AGS N/A GO:0005524 ... P32839 40410623
    982572 9gu9:D (2.74) BS02 AGS N/A GO:0005524 ... P32839 40410623
    982573 9gu9:E (2.74) BS01 AGS N/A GO:0005524 ... P32839 40410623
    982574 9gu9:E (2.74) BS02 AGS N/A GO:0005524 ... P32839 40410623
    982575 9gu9:F (2.74) BS01 AGS N/A GO:0005524 ... P32839 40410623
    982576 9gu9:F (2.74) BS02 AGS N/A GO:0005524 ... P32839 40410623
    982577 9gu9:G (2.74) BS01 AGS N/A GO:0005524 ... P32839 40410623
    982578 9gu9:G (2.74) BS02 AGS N/A GO:0005524 ... P32839 40410623
    982579 9gub:A (1.1) BS01 A1IO2 N/A N/A P0DTD1 40407321
    982580 9gub:B (1.1) BS01 A1IO2 N/A N/A P0DTD1 40407321
    982581 9guc:A (2.1) BS01 ADP N/A GO:0000212 ... O14965 N/A
    982582 9guc:A (2.1) BS02 AMP N/A GO:0000212 ... O14965 N/A
    982583 9gud:A (2.05) BS01 A1IO1 N/A GO:0004483 ... P0DTD1 N/A
    982584 9gud:A (2.05) BS02 SAM N/A GO:0004483 ... P0DTD1 N/A
    982585 9gud:B (2.05) BS01 ZN N/A GO:0003723 ... P0DTD1 N/A
    982586 9gud:B (2.05) BS02 ZN N/A GO:0003723 ... P0DTD1 N/A
    982587 9gue:A (1.95) BS01 A1IO0 N/A GO:0004483 ... P0DTD1 N/A
    982588 9gue:A (1.95) BS02 SAM N/A GO:0004483 ... P0DTD1 N/A
    982589 9gue:B (1.95) BS01 ZN N/A GO:0003723 ... P0DTD1 N/A
    982590 9gue:B (1.95) BS02 ZN N/A GO:0003723 ... P0DTD1 N/A
    982591 9guf:A (1.9) BS01 A1IOZ N/A GO:0004483 ... P0DTD1 N/A
    982592 9guf:A (1.9) BS02 SAM N/A GO:0004483 ... P0DTD1 N/A
    982593 9guf:B (1.9) BS01 ZN N/A GO:0003723 ... P0DTD1 N/A
    982594 9guf:B (1.9) BS02 ZN N/A GO:0003723 ... P0DTD1 N/A
    982595 9gui:A (3.0) BS01 dna N/A GO:0003677 ... P29283 39995039
    982596 9gui:A (3.0) BS02 dna N/A GO:0003677 ... P29283 39995039
    982597 9gui:A (3.0) BS03 AKG N/A GO:0003677 ... P29283 39995039
    982598 9gui:B (3.0) BS01 dna N/A GO:0003677 ... P29283 39995039
    982599 9gui:B (3.0) BS02 dna N/A GO:0003677 ... P29283 39995039
    982600 9gui:B (3.0) BS03 AKG N/A GO:0003677 ... P29283 39995039

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).