SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    983201 9gxv:B (3.87) BS02 dna N/A GO:0003677 ... A3DC70 41381534
    983202 9gxv:B (3.87) BS03 ZN N/A GO:0003677 ... A3DC70 41381534
    983203 9gxv:B (3.87) BS04 ZN N/A GO:0003677 ... A3DC70 41381534
    983204 9gxv:B (3.87) BS05 ADP N/A GO:0003677 ... A3DC70 41381534
    983205 9gxv:B (3.87) BS06 ADP N/A GO:0003677 ... A3DC70 41381534
    983206 9gxw:A (3.63) BS01 dna N/A GO:0003677 ... A3DC70 41381534
    983207 9gxw:A (3.63) BS02 dna N/A GO:0003677 ... A3DC70 41381534
    983208 9gxw:A (3.63) BS03 ZN N/A GO:0003677 ... A3DC70 41381534
    983209 9gxw:A (3.63) BS04 ZN N/A GO:0003677 ... A3DC70 41381534
    983210 9gxw:A (3.63) BS05 ANP N/A GO:0003677 ... A3DC70 41381534
    983211 9gxw:B (3.63) BS01 dna N/A GO:0003677 ... A3DC70 41381534
    983212 9gxw:B (3.63) BS02 dna N/A GO:0003677 ... A3DC70 41381534
    983213 9gxw:B (3.63) BS03 ZN N/A GO:0003677 ... A3DC70 41381534
    983214 9gxw:B (3.63) BS04 ZN N/A GO:0003677 ... A3DC70 41381534
    983215 9gxw:B (3.63) BS05 ANP N/A GO:0003677 ... A3DC70 41381534
    983216 9gxx:0 (2.61) BS01 rna N/A GO:0000027 ... P0A7N9 40571681
    983217 9gxx:1 (2.61) BS01 rna N/A GO:0002181 ... P0A7P5 40571681
    983218 9gxx:2 (2.61) BS01 rna N/A GO:0002181 ... P0A7Q1 40571681
    983219 9gxx:3 (2.61) BS01 rna N/A GO:0002181 ... P0A7Q6 40571681
    983220 9gxx:3 (2.61) BS02 ZN N/A GO:0002181 ... P0A7Q6 40571681
    983221 9gxx:4 (2.61) BS01 rna N/A GO:0002181 ... P0A7M9 40571681
    983222 9gxx:4 (2.61) BS02 ZN N/A GO:0002181 ... P0A7M9 40571681
    983223 9gxx:B (2.61) BS01 rna N/A GO:0000028 ... P0A7V0 40571681
    983224 9gxx:C (2.61) BS01 rna N/A GO:0000028 ... P0A7V3 40571681
    983225 9gxx:D (2.61) BS01 rna N/A GO:0000028 ... P0A7V8 40571681
    983226 9gxx:E (2.61) BS01 rna N/A GO:0000028 ... P0A7W1 40571681
    983227 9gxx:F (2.61) BS01 rna N/A GO:0002181 ... P02358 40571681
    983228 9gxx:G (2.61) BS01 rna N/A GO:0000028 ... P02359 40571681
    983229 9gxx:G (2.61) BS02 rna N/A GO:0000028 ... P02359 40571681
    983230 9gxx:H (2.61) BS01 rna N/A GO:0000028 ... P0A7W7 40571681
    983231 9gxx:I (2.61) BS01 rna N/A GO:0002181 ... P0A7X3 40571681
    983232 9gxx:I (2.61) BS02 rna N/A GO:0002181 ... P0A7X3 40571681
    983233 9gxx:J (2.61) BS01 rna N/A GO:0000049 ... P0A7R5 40571681
    983234 9gxx:K (2.61) BS01 rna N/A GO:0002181 ... P0A7R9 40571681
    983235 9gxx:L (2.61) BS01 rna N/A GO:0000049 ... P0A7S3 40571681
    983236 9gxx:M (2.61) BS01 rna N/A GO:0000049 ... P0A7S9 40571681
    983237 9gxx:M (2.61) BS02 rna N/A GO:0000049 ... P0A7S9 40571681
    983238 9gxx:N (2.61) BS01 rna N/A GO:0000028 ... P0AG59 40571681
    983239 9gxx:O (2.61) BS01 rna N/A GO:0000028 ... P0ADZ4 40571681
    983240 9gxx:O (2.61) BS02 rna N/A GO:0000028 ... P0ADZ4 40571681
    983241 9gxx:P (2.61) BS01 rna N/A GO:0000028 ... P0A7T3 40571681
    983242 9gxx:Q (2.61) BS01 rna N/A GO:0000028 ... P0AG63 40571681
    983243 9gxx:R (2.61) BS01 rna N/A GO:0002181 ... P0A7T7 40571681
    983244 9gxx:S (2.61) BS01 rna N/A GO:0002181 ... P0A7U3 40571681
    983245 9gxx:T (2.61) BS01 rna N/A GO:0000028 ... P0A7U7 40571681
    983246 9gxx:U (2.61) BS01 rna N/A GO:0000028 ... P68679 40571681
    983247 9gxx:c (2.61) BS01 rna N/A GO:0000027 ... P60422 40571681
    983248 9gxx:c (2.61) BS02 rna N/A GO:0000027 ... P60422 40571681
    983249 9gxx:d (2.61) BS01 rna N/A GO:0000027 ... P60438 40571681
    983250 9gxx:e (2.61) BS01 rna N/A GO:0001070 ... P60723 40571681
    983251 9gxx:f (2.61) BS01 rna N/A GO:0000027 ... P62399 40571681
    983252 9gxx:f (2.61) BS02 rna N/A GO:0000027 ... P62399 40571681
    983253 9gxx:f (2.61) BS03 rna N/A GO:0000027 ... P62399 40571681
    983254 9gxx:g (2.61) BS01 rna N/A GO:0000027 ... P0AG55 40571681
    983255 9gxx:h (2.61) BS01 rna N/A GO:0002181 ... P0A7R1 40571681
    983256 9gxx:i (2.61) BS01 rna N/A GO:0002181 ... P0AA10 40571681
    983257 9gxx:j (2.61) BS01 rna N/A GO:0002181 ... P0ADY3 40571681
    983258 9gxx:j (2.61) BS02 rna N/A GO:0002181 ... P0ADY3 40571681
    983259 9gxx:k (2.61) BS01 rna N/A GO:0002181 ... P02413 40571681
    983260 9gxx:l (2.61) BS01 rna N/A GO:0000027 ... P0ADY7 40571681
    983261 9gxx:l (2.61) BS02 rna N/A GO:0000027 ... P0ADY7 40571681
    983262 9gxx:l (2.61) BS03 rna N/A GO:0000027 ... P0ADY7 40571681
    983263 9gxx:m (2.61) BS01 rna N/A GO:0000027 ... P0AG44 40571681
    983264 9gxx:n (2.61) BS01 rna N/A GO:0002181 ... P0C018 40571681
    983265 9gxx:n (2.61) BS02 rna N/A GO:0002181 ... P0C018 40571681
    983266 9gxx:o (2.61) BS01 rna N/A GO:0000027 ... P0A7K6 40571681
    983267 9gxx:o (2.61) BS02 rna N/A GO:0000027 ... P0A7K6 40571681
    983268 9gxx:p (2.61) BS01 rna N/A GO:0000027 ... P0A7L3 40571681
    983269 9gxx:q (2.61) BS01 rna N/A GO:0002181 ... P0AG48 40571681
    983270 9gxx:r (2.61) BS01 rna N/A GO:0002181 ... P61175 40571681
    983271 9gxx:s (2.61) BS01 rna N/A GO:0000027 ... P0ADZ0 40571681
    983272 9gxx:t (2.61) BS01 rna N/A GO:0000027 ... P60624 40571681
    983273 9gxx:u (2.61) BS01 rna N/A GO:0000027 ... P68919 40571681
    983274 9gxx:v (2.61) BS01 rna N/A GO:0000027 ... P0A7L8 40571681
    983275 9gxx:v (2.61) BS02 rna N/A GO:0000027 ... P0A7L8 40571681
    983276 9gxx:w (2.61) BS01 rna N/A GO:0000027 ... P0A7M2 40571681
    983277 9gxx:x (2.61) BS01 rna N/A GO:0000027 ... P0A7M6 40571681
    983278 9gxx:y (2.61) BS01 rna N/A GO:0000027 ... P0AG51 40571681
    983279 9gxx:z (2.61) BS01 rna N/A GO:0000027 ... P0A7N4 40571681
    983280 9gxy:A (1.16) BS01 A1IKB N/A GO:0000785 ... P19784 40672667
    983281 9gy0:A (3.42) BS01 dna N/A GO:0000287 ... Q9Y2M0 40368883
    983282 9gy0:A (3.42) BS02 dna N/A GO:0000287 ... Q9Y2M0 40368883
    983283 9gy0:A (3.42) BS03 dna N/A GO:0000287 ... Q9Y2M0 40368883
    983284 9gy0:A (3.42) BS04 CA N/A GO:0000287 ... Q9Y2M0 40368883
    983285 9gy1:A (1.35) BS01 ZN N/A N/A D7WEP7 40325189
    983286 9gy2:A (1.57) BS01 CA N/A GO:0004629 ... P15713 N/A
    983287 9gy2:A (1.57) BS02 CA N/A GO:0004629 ... P15713 N/A
    983288 9gy2:B (1.57) BS01 CA N/A GO:0004629 ... P15713 N/A
    983289 9gy2:B (1.57) BS02 CA N/A GO:0004629 ... P15713 N/A
    983290 9gy3:A (2.5) BS01 A1IQT N/A N/A Q96SW2 40950085
    983291 9gy3:A (2.5) BS02 ZN N/A N/A Q96SW2 40950085
    983292 9gy3:A (2.5) BS03 A1IQT N/A N/A Q96SW2 40950085
    983293 9gy3:C (2.5) BS01 A1IQT N/A N/A Q96SW2 40950085
    983294 9gy3:C (2.5) BS02 A1IQT N/A N/A Q96SW2 40950085
    983295 9gy3:C (2.5) BS03 ZN N/A N/A Q96SW2 40950085
    983296 9gy4:C (3.0) BS01 rna N/A GO:0005515 ... Q96HY6 40315331
    983297 9gy4:E (3.0) BS01 rna N/A GO:0000077 ... O94874 40315331
    983298 9gy4:F (3.0) BS01 rna N/A GO:0004842 ... O94822 40315331
    983299 9gy4:LB (3.0) BS01 rna N/A GO:0002181 ... P39023 40315331
    983300 9gy4:LC (3.0) BS01 rna N/A GO:0002181 ... P36578 40315331
    983301 9gy4:LC (3.0) BS02 rna N/A GO:0002181 ... P36578 40315331
    983302 9gy4:LD (3.0) BS01 rna N/A GO:0000027 ... P46777 40315331
    983303 9gy4:LD (3.0) BS02 rna N/A GO:0000027 ... P46777 40315331
    983304 9gy4:LE (3.0) BS01 rna N/A GO:0002181 ... Q02878 40315331
    983305 9gy4:LF (3.0) BS01 rna N/A GO:0000463 ... P18124 40315331
    983306 9gy4:LF (3.0) BS02 rna N/A GO:0000463 ... P18124 40315331
    983307 9gy4:LG (3.0) BS01 rna N/A GO:0000470 ... P62424 40315331
    983308 9gy4:LG (3.0) BS02 rna N/A GO:0000470 ... P62424 40315331
    983309 9gy4:LH (3.0) BS01 rna N/A GO:0002181 ... P32969 40315331
    983310 9gy4:LI (3.0) BS01 rna N/A GO:0000027 ... Q96L21 40315331
    983311 9gy4:LI (3.0) BS02 rna N/A GO:0000027 ... Q96L21 40315331
    983312 9gy4:LI (3.0) BS03 rna N/A GO:0000027 ... Q96L21 40315331
    983313 9gy4:LJ (3.0) BS01 rna N/A GO:0000027 ... P62913 40315331
    983314 9gy4:LJ (3.0) BS02 rna N/A GO:0000027 ... P62913 40315331
    983315 9gy4:LJ (3.0) BS03 rna N/A GO:0000027 ... P62913 40315331
    983316 9gy4:LL (3.0) BS01 rna N/A GO:0002181 ... P26373 40315331
    983317 9gy4:LL (3.0) BS02 rna N/A GO:0002181 ... P26373 40315331
    983318 9gy4:LM (3.0) BS01 rna N/A GO:0002181 ... P50914 40315331
    983319 9gy4:LN (3.0) BS01 rna N/A GO:0002181 ... P61313 40315331
    983320 9gy4:LN (3.0) BS02 rna N/A GO:0002181 ... P61313 40315331
    983321 9gy4:LO (3.0) BS01 rna N/A GO:0002181 ... P40429 40315331
    983322 9gy4:LP (3.0) BS01 rna N/A GO:0002181 ... P18621 40315331
    983323 9gy4:LP (3.0) BS02 rna N/A GO:0002181 ... P18621 40315331
    983324 9gy4:LQ (3.0) BS01 rna N/A GO:0002181 ... Q07020 40315331
    983325 9gy4:LR (3.0) BS01 rna N/A GO:0002181 ... P84098 40315331
    983326 9gy4:LS (3.0) BS01 rna N/A GO:0002181 ... Q02543 40315331
    983327 9gy4:LS (3.0) BS02 rna N/A GO:0002181 ... Q02543 40315331
    983328 9gy4:LT (3.0) BS01 rna N/A GO:0001650 ... P46778 40315331
    983329 9gy4:LT (3.0) BS02 rna N/A GO:0001650 ... P46778 40315331
    983330 9gy4:LU (3.0) BS01 rna N/A GO:0002181 ... P35268 40315331
    983331 9gy4:LV (3.0) BS01 rna N/A GO:0000122 ... P62829 40315331
    983332 9gy4:LW (3.0) BS01 rna N/A GO:0002181 ... P83731 40315331
    983333 9gy4:LX (3.0) BS01 rna N/A GO:0002181 ... P62750 40315331
    983334 9gy4:LX (3.0) BS02 rna N/A GO:0002181 ... P62750 40315331
    983335 9gy4:LY (3.0) BS01 rna N/A GO:0002181 ... P61254 40315331
    983336 9gy4:LY (3.0) BS02 rna N/A GO:0002181 ... P61254 40315331
    983337 9gy4:LZ (3.0) BS01 rna N/A GO:0002181 ... P61353 40315331
    983338 9gy4:La (3.0) BS01 rna N/A GO:0002181 ... P46776 40315331
    983339 9gy4:Lb (3.0) BS01 rna N/A GO:0002181 ... P47914 40315331
    983340 9gy4:Lc (3.0) BS01 rna N/A GO:0002181 ... P62888 40315331
    983341 9gy4:Ld (3.0) BS01 rna N/A GO:0002181 ... P62899 40315331
    983342 9gy4:Le (3.0) BS01 rna N/A GO:0002181 ... P62910 40315331
    983343 9gy4:Lf (3.0) BS01 rna N/A GO:0002181 ... P18077 40315331
    983344 9gy4:Lg (3.0) BS01 rna N/A GO:0002181 ... P49207 40315331
    983345 9gy4:Lg (3.0) BS02 ZN N/A GO:0002181 ... P49207 40315331
    983346 9gy4:Lh (3.0) BS01 rna N/A GO:0000463 ... P42766 40315331
    983347 9gy4:Lh (3.0) BS02 rna N/A GO:0000463 ... P42766 40315331
    983348 9gy4:Li (3.0) BS01 rna N/A GO:0002181 ... Q9Y3U8 40315331
    983349 9gy4:Lj (3.0) BS01 rna N/A GO:0000448 ... P61927 40315331
    983350 9gy4:Lj (3.0) BS02 rna N/A GO:0000448 ... P61927 40315331
    983351 9gy4:Lj (3.0) BS03 ZN N/A GO:0000448 ... P61927 40315331
    983352 9gy4:Lk (3.0) BS01 rna N/A GO:0002181 ... P63173 40315331
    983353 9gy4:Ll (3.0) BS01 rna N/A GO:0002181 ... P62891 40315331
    983354 9gy4:Ll (3.0) BS02 rna N/A GO:0002181 ... P62891 40315331
    983355 9gy4:Lm (3.0) BS01 rna N/A GO:0002181 ... P62987 40315331
    983356 9gy4:Lm (3.0) BS02 ZN N/A GO:0002181 ... P62987 40315331
    983357 9gy4:Lo (3.0) BS01 rna N/A GO:0002181 ... P83881 40315331
    983358 9gy4:Lo (3.0) BS02 ZN N/A GO:0002181 ... P83881 40315331
    983359 9gy4:Lp (3.0) BS01 rna N/A GO:0002181 ... P61513 40315331
    983360 9gy4:Lp (3.0) BS02 ZN N/A GO:0002181 ... P61513 40315331
    983361 9gy4:Lr (3.0) BS01 rna N/A GO:0002181 ... P46779 40315331
    983362 9gy4:Lz (3.0) BS01 rna N/A GO:0002181 ... P62906 40315331
    983363 9gy4:Z (3.0) BS01 rna N/A GO:0000049 ... O60524 40315331
    983364 9gy4:Z (3.0) BS02 rna N/A GO:0000049 ... O60524 40315331
    983365 9gy4:a (3.0) BS01 rna N/A GO:0002181 ... P62917 40315331
    983366 9gy4:s (3.0) BS01 rna N/A GO:0002181 ... P05388 40315331
    983367 9gy4:t (3.0) BS01 rna N/A GO:0002181 ... P30050 40315331
    983368 9gy5:A (1.8) BS01 ZN N/A GO:0004222 ... N/A 41223264
    983369 9gy6:A (3.1) BS01 peptide N/A GO:0004497 ... A0R051 40191462
    983370 9gy6:A (3.1) BS02 FES N/A GO:0004497 ... A0R051 40191462
    983371 9gy6:A (3.1) BS03 9YF N/A GO:0004497 ... A0R051 40191462
    983372 9gy6:A (3.1) BS04 9YF N/A GO:0004497 ... A0R051 40191462
    983373 9gy6:B (3.1) BS01 peptide N/A GO:0005886 ... A0R052 40191462
    983374 9gy6:B (3.1) BS02 9YF N/A GO:0005886 ... A0R052 40191462
    983375 9gy6:B (3.1) BS03 HEM N/A GO:0005886 ... A0R052 40191462
    983376 9gy6:B (3.1) BS04 HEM N/A GO:0005886 ... A0R052 40191462
    983377 9gy6:B (3.1) BS05 A1IRE N/A GO:0005886 ... A0R052 40191462
    983378 9gy6:B (3.1) BS06 MQ9 N/A GO:0005886 ... A0R052 40191462
    983379 9gy6:B (3.1) BS07 9YF N/A GO:0005886 ... A0R052 40191462
    983380 9gy6:C (3.1) BS01 HEC N/A GO:0005506 ... A0R050 40191462
    983381 9gy6:C (3.1) BS02 HEC N/A GO:0005506 ... A0R050 40191462
    983382 9gy6:C (3.1) BS03 9YF N/A GO:0005506 ... A0R050 40191462
    983383 9gy6:C (3.1) BS04 MQ9 N/A GO:0005506 ... A0R050 40191462
    983384 9gy6:C (3.1) BS05 MQ7 N/A GO:0005506 ... A0R050 40191462
    983385 9gy6:D (3.1) BS01 peptide N/A N/A A0QVH4 40191462
    983386 9gy6:D (3.1) BS02 9Y0 N/A N/A A0QVH4 40191462
    983387 9gy6:E (3.1) BS01 CU N/A GO:0004129 ... A0R057 40191462
    983388 9gy6:E (3.1) BS02 CU N/A GO:0004129 ... A0R057 40191462
    983389 9gy6:E (3.1) BS03 HEA N/A GO:0004129 ... A0R057 40191462
    983390 9gy6:F (3.1) BS01 HEA N/A GO:0004129 ... A0A2U9PNL2 40191462
    983391 9gy6:F (3.1) BS02 HEA N/A GO:0004129 ... A0A2U9PNL2 40191462
    983392 9gy6:F (3.1) BS03 CU N/A GO:0004129 ... A0A2U9PNL2 40191462
    983393 9gy6:F (3.1) BS04 CA N/A GO:0004129 ... A0A2U9PNL2 40191462
    983394 9gy6:F (3.1) BS05 9Y0 N/A GO:0004129 ... A0A2U9PNL2 40191462
    983395 9gy6:F (3.1) BS06 MQ7 N/A GO:0004129 ... A0A2U9PNL2 40191462
    983396 9gy6:G (3.1) BS01 9Y0 N/A GO:0004129 ... A0R049 40191462
    983397 9gy6:H (3.1) BS01 9YF N/A GO:0004129 ... A0R056 40191462
    983398 9gy6:H (3.1) BS02 MQ7 N/A GO:0004129 ... A0R056 40191462
    983399 9gy6:M (3.1) BS01 peptide N/A GO:0004497 ... A0R051 40191462
    983400 9gy6:M (3.1) BS02 9YF N/A GO:0004497 ... A0R051 40191462

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).