SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    983401 9gy6:M (3.1) BS03 FES N/A GO:0004497 ... A0R051 40191462
    983402 9gy6:M (3.1) BS04 9YF N/A GO:0004497 ... A0R051 40191462
    983403 9gy6:N (3.1) BS01 peptide N/A GO:0005886 ... A0R052 40191462
    983404 9gy6:N (3.1) BS02 9YF N/A GO:0005886 ... A0R052 40191462
    983405 9gy6:N (3.1) BS03 9YF N/A GO:0005886 ... A0R052 40191462
    983406 9gy6:N (3.1) BS04 HEM N/A GO:0005886 ... A0R052 40191462
    983407 9gy6:N (3.1) BS05 HEM N/A GO:0005886 ... A0R052 40191462
    983408 9gy6:N (3.1) BS06 A1IRE N/A GO:0005886 ... A0R052 40191462
    983409 9gy6:N (3.1) BS07 MQ7 N/A GO:0005886 ... A0R052 40191462
    983410 9gy6:N (3.1) BS08 MQ9 N/A GO:0005886 ... A0R052 40191462
    983411 9gy6:O (3.1) BS01 MQ7 N/A GO:0005506 ... A0R050 40191462
    983412 9gy6:O (3.1) BS02 HEC N/A GO:0005506 ... A0R050 40191462
    983413 9gy6:O (3.1) BS03 HEC N/A GO:0005506 ... A0R050 40191462
    983414 9gy6:O (3.1) BS04 9YF N/A GO:0005506 ... A0R050 40191462
    983415 9gy6:O (3.1) BS05 MQ9 N/A GO:0005506 ... A0R050 40191462
    983416 9gy6:P (3.1) BS01 9Y0 N/A N/A A0QVH4 40191462
    983417 9gy6:Q (3.1) BS01 CU N/A GO:0004129 ... A0R057 40191462
    983418 9gy6:Q (3.1) BS02 CU N/A GO:0004129 ... A0R057 40191462
    983419 9gy6:R (3.1) BS01 HEA N/A GO:0004129 ... A0A2U9PNL2 40191462
    983420 9gy6:R (3.1) BS02 HEA N/A GO:0004129 ... A0A2U9PNL2 40191462
    983421 9gy6:R (3.1) BS03 CU N/A GO:0004129 ... A0A2U9PNL2 40191462
    983422 9gy6:R (3.1) BS04 CA N/A GO:0004129 ... A0A2U9PNL2 40191462
    983423 9gy6:S (3.1) BS01 9Y0 N/A GO:0004129 ... A0R049 40191462
    983424 9gy6:T (3.1) BS01 9YF N/A GO:0004129 ... A0R056 40191462
    983425 9gy6:T (3.1) BS02 9Y0 N/A GO:0004129 ... A0R056 40191462
    983426 9gy7:A (3.18) BS01 dna N/A GO:0003677 ... A3DC70 41381534
    983427 9gy7:A (3.18) BS02 dna N/A GO:0003677 ... A3DC70 41381534
    983428 9gy7:A (3.18) BS03 ZN N/A GO:0003677 ... A3DC70 41381534
    983429 9gy7:A (3.18) BS04 ANP N/A GO:0003677 ... A3DC70 41381534
    983430 9gy7:A (3.18) BS05 ANP N/A GO:0003677 ... A3DC70 41381534
    983431 9gy7:A (3.18) BS06 MG N/A GO:0003677 ... A3DC70 41381534
    983432 9gy7:B (3.18) BS01 dna N/A GO:0003677 ... A3DC70 41381534
    983433 9gy7:B (3.18) BS02 dna N/A GO:0003677 ... A3DC70 41381534
    983434 9gy7:B (3.18) BS03 ZN N/A GO:0003677 ... A3DC70 41381534
    983435 9gy7:B (3.18) BS04 ANP N/A GO:0003677 ... A3DC70 41381534
    983436 9gy7:B (3.18) BS05 ANP N/A GO:0003677 ... A3DC70 41381534
    983437 9gy7:B (3.18) BS06 MG N/A GO:0003677 ... A3DC70 41381534
    983438 9gy7:E (3.18) BS01 dna N/A GO:0003677 ... A3DC68 41381534
    983439 9gy7:E (3.18) BS02 dna N/A GO:0003677 ... A3DC68 41381534
    983440 9gy7:F (3.18) BS01 dna N/A GO:0003677 ... A3DC68 41381534
    983441 9gy7:F (3.18) BS02 dna N/A GO:0003677 ... A3DC68 41381534
    983442 9gy8:A (2.2) BS01 peptide N/A GO:0003677 ... Q9PTN2 39610329
    983443 9gy8:A (2.2) BS02 A1IQM N/A GO:0003677 ... Q9PTN2 39610329
    983444 9gya:A (1.85) BS01 peptide N/A GO:0003677 ... Q9PTN2 39610329
    983445 9gya:A (1.85) BS02 A1IQQ N/A GO:0003677 ... Q9PTN2 39610329
    983446 9gyb:A (2.9) BS01 SF4 N/A GO:0003824 ... P31896 39912726
    983447 9gyb:A (2.9) BS02 RQM N/A GO:0003824 ... P31896 39912726
    983448 9gyb:A (2.9) BS03 SF4 N/A GO:0003824 ... P31896 39912726
    983449 9gyb:B (2.9) BS01 SF4 N/A GO:0003824 ... P31896 39912726
    983450 9gyb:B (2.9) BS02 SF4 N/A GO:0003824 ... P31896 39912726
    983451 9gyb:B (2.9) BS03 RQM N/A GO:0003824 ... P31896 39912726
    983452 9gyb:C (2.9) BS01 SF4 N/A GO:0003824 ... P31896 39912726
    983453 9gyb:C (2.9) BS02 SF4 N/A GO:0003824 ... P31896 39912726
    983454 9gyb:C (2.9) BS03 RQM N/A GO:0003824 ... P31896 39912726
    983455 9gyb:D (2.9) BS01 SF4 N/A GO:0003824 ... P31896 39912726
    983456 9gyb:D (2.9) BS02 SF4 N/A GO:0003824 ... P31896 39912726
    983457 9gyb:D (2.9) BS03 RQM N/A GO:0003824 ... P31896 39912726
    983458 9gyb:E (2.9) BS01 SF4 N/A GO:0003824 ... P31896 39912726
    983459 9gyb:E (2.9) BS02 SF4 N/A GO:0003824 ... P31896 39912726
    983460 9gyb:E (2.9) BS03 RQM N/A GO:0003824 ... P31896 39912726
    983461 9gyb:F (2.9) BS01 SF4 N/A GO:0003824 ... P31896 39912726
    983462 9gyb:F (2.9) BS02 SF4 N/A GO:0003824 ... P31896 39912726
    983463 9gyb:F (2.9) BS03 RQM N/A GO:0003824 ... P31896 39912726
    983464 9gyc:A (2.2) BS01 peptide N/A GO:0003677 ... Q9PTN2 39610329
    983465 9gyc:A (2.2) BS02 A1IQP N/A GO:0003677 ... Q9PTN2 39610329
    983466 9gyd:A (0.92) BS01 FES N/A GO:0009055 ... P00221 40347495
    983467 9gye:A (3.5) BS01 CA N/A GO:0004629 ... P06200 N/A
    983468 9gyf:A (2.8) BS01 peptide N/A GO:0000723 ... P12956 N/A
    983469 9gyf:A (2.8) BS02 dna N/A GO:0000723 ... P12956 N/A
    983470 9gyf:A (2.8) BS03 dna N/A GO:0000723 ... P12956 N/A
    983471 9gyf:B (2.8) BS01 peptide N/A GO:0000723 ... P13010 N/A
    983472 9gyf:B (2.8) BS02 dna N/A GO:0000723 ... P13010 N/A
    983473 9gyf:B (2.8) BS03 dna N/A GO:0000723 ... P13010 N/A
    983474 9gyj:A (1.9) BS01 peptide N/A GO:0003677 ... Q9PTN2 39610329
    983475 9gyj:A (1.9) BS02 A1IQN N/A GO:0003677 ... Q9PTN2 39610329
    983476 9gyk:A (2.2) BS01 peptide N/A GO:0003677 ... Q9PTN2 39610329
    983477 9gyk:A (2.2) BS02 A1IQO N/A GO:0003677 ... Q9PTN2 39610329
    983478 9gyl:AAA (1.19) BS01 FES N/A GO:0009055 ... P00221 40347495
    983479 9gyn:AAA (1.0) BS01 FES N/A GO:0009055 ... P00221 40347495
    983480 9gyo:R (2.5) BS01 FWX N/A GO:0004930 ... P0ABE7
    Q8TDU6
    40858717
    983481 9gyo:R (2.5) BS02 CLR N/A GO:0004930 ... P0ABE7
    Q8TDU6
    40858717
    983482 9gyo:R (2.5) BS03 CLR N/A GO:0004930 ... P0ABE7
    Q8TDU6
    40858717
    983483 9gyo:R (2.5) BS04 CLR N/A GO:0004930 ... P0ABE7
    Q8TDU6
    40858717
    983484 9gyp:A (1.801) BS01 A1IQU N/A GO:0000118 ... P49773 40340313
    983485 9gyq:A (2.001) BS01 A1IQV N/A GO:0000118 ... P49773 40340313
    983486 9gyr:A (1.1) BS01 FES N/A GO:0009055 ... P00221 40347495
    983487 9gyr:B (1.1) BS01 FES N/A GO:0009055 ... P00221 40347495
    983488 9gyr:C (1.1) BS01 FES N/A GO:0009055 ... P00221 40347495
    983489 9gyr:D (1.1) BS01 FES N/A GO:0009055 ... P00221 40347495
    983490 9gys:A (1.74) BS01 A1IQW N/A GO:0003676 ... P61823 39551297
    983491 9gys:A (1.74) BS02 A1IQW N/A GO:0003676 ... P61823 39551297
    983492 9gys:B (1.74) BS01 A1IQW N/A GO:0003676 ... P61823 39551297
    983493 9gys:B (1.74) BS02 A1IQW N/A GO:0003676 ... P61823 39551297
    983494 9gyt:1B (2.11) BS01 rna N/A GO:0003723 ... A0A0D3B6N5 41330901
    983495 9gyt:1C (2.11) BS01 rna N/A GO:0003735 ... N/A 41330901
    983496 9gyt:1D (2.11) BS01 rna N/A GO:0003735 ... N/A 41330901
    983497 9gyt:1E (2.11) BS01 rna N/A GO:0003735 ... N/A 41330901
    983498 9gyt:1F (2.11) BS01 rna N/A GO:0003735 ... N/A 41330901
    983499 9gyt:1F (2.11) BS02 rna N/A GO:0003735 ... N/A 41330901
    983500 9gyt:1G (2.11) BS01 rna N/A GO:0003735 ... A0A0D3D316 41330901
    983501 9gyt:1H (2.11) BS01 rna N/A GO:0003735 ... N/A 41330901
    983502 9gyt:1I (2.11) BS01 rna N/A N/A N/A 41330901
    983503 9gyt:1J (2.11) BS01 rna N/A GO:0003735 ... N/A 41330901
    983504 9gyt:1K (2.11) BS01 rna N/A GO:0003729 ... A0A0D3B978 41330901
    983505 9gyt:1L (2.11) BS01 rna N/A GO:0003735 ... A0A0D3D9E7 41330901
    983506 9gyt:1L (2.11) BS02 rna N/A GO:0003735 ... A0A0D3D9E7 41330901
    983507 9gyt:1M (2.11) BS01 rna N/A GO:0003735 ... N/A 41330901
    983508 9gyt:1N (2.11) BS01 rna N/A GO:0003735 ... Q95747 41330901
    983509 9gyt:1N (2.11) BS02 rna N/A GO:0003735 ... Q95747 41330901
    983510 9gyt:1O (2.11) BS01 rna N/A GO:0003735 ... A0A8S9IRX0 41330901
    983511 9gyt:1P (2.11) BS01 rna N/A GO:0003735 ... A0A0D3DCH7 41330901
    983512 9gyt:1P (2.11) BS02 rna N/A GO:0003735 ... A0A0D3DCH7 41330901
    983513 9gyt:1Q (2.11) BS01 rna N/A GO:0003735 ... A0A0D3B0P2 41330901
    983514 9gyt:1Q (2.11) BS02 rna N/A GO:0003735 ... A0A0D3B0P2 41330901
    983515 9gyt:1R (2.11) BS01 rna N/A GO:0003735 ... N/A 41330901
    983516 9gyt:1S (2.11) BS01 rna N/A GO:0003723 ... N/A 41330901
    983517 9gyt:1T (2.11) BS01 rna N/A GO:0003735 ... A0A0D3BFS0 41330901
    983518 9gyt:1U (2.11) BS01 rna N/A GO:0003735 ... N/A 41330901
    983519 9gyt:1V (2.11) BS01 rna N/A GO:0003723 ... N/A 41330901
    983520 9gyt:1W (2.11) BS01 rna N/A GO:0003735 ... N/A 41330901
    983521 9gyt:1X (2.11) BS01 rna N/A GO:0003735 ... A0A0D3BK40 41330901
    983522 9gyt:1X (2.11) BS02 rna N/A GO:0003735 ... A0A0D3BK40 41330901
    983523 9gyt:1Y (2.11) BS01 rna N/A GO:0003735 ... A0A0D3B184 41330901
    983524 9gyt:1Y (2.11) BS02 rna N/A GO:0003735 ... A0A0D3B184 41330901
    983525 9gyt:1Z (2.11) BS01 rna N/A GO:0003735 ... N/A 41330901
    983526 9gyt:1a (2.11) BS01 rna N/A GO:0003735 ... N/A 41330901
    983527 9gyt:1b (2.11) BS01 rna N/A GO:0003735 ... N/A 41330901
    983528 9gyt:1b (2.11) BS02 rna N/A GO:0003735 ... N/A 41330901
    983529 9gyt:1c (2.11) BS01 rna N/A N/A N/A 41330901
    983530 9gyt:1c (2.11) BS02 rna N/A N/A N/A 41330901
    983531 9gyt:1d (2.11) BS01 rna N/A GO:0003735 ... N/A 41330901
    983532 9gyt:1d (2.11) BS02 ZN N/A GO:0003735 ... N/A 41330901
    983533 9gyt:1e (2.11) BS01 rna N/A GO:0003735 ... N/A 41330901
    983534 9gyt:1f (2.11) BS01 rna N/A GO:0003735 ... A0A0D3CKG1 41330901
    983535 9gyt:1g (2.11) BS01 rna N/A GO:0003735 ... N/A 41330901
    983536 9gyt:1h (2.11) BS01 rna N/A GO:0003735 ... Q8W464 41330901
    983537 9gyt:1h (2.11) BS02 ZN N/A GO:0003735 ... Q8W464 41330901
    983538 9gyt:1i (2.11) BS01 rna N/A GO:0005761 ... A0A3P6DV95 41330901
    983539 9gyt:1j (2.11) BS01 rna N/A GO:0003735 ... N/A 41330901
    983540 9gyt:1k (2.11) BS01 rna N/A GO:0003735 ... A0A0D3DUE5 41330901
    983541 9gyt:1l (2.11) BS01 rna N/A GO:0003735 ... N/A 41330901
    983542 9gyt:1m (2.11) BS01 rna N/A N/A N/A 41330901
    983543 9gyt:1o (2.11) BS01 rna N/A N/A N/A 41330901
    983544 9gyt:1p (2.11) BS01 rna N/A N/A N/A 41330901
    983545 9gyt:1q (2.11) BS01 rna N/A N/A A0A0D3BIE3 41330901
    983546 9gyt:1q (2.11) BS02 rna N/A N/A A0A0D3BIE3 41330901
    983547 9gyt:1r (2.11) BS01 rna N/A N/A N/A 41330901
    983548 9gyt:1s (2.11) BS01 rna N/A GO:0005739 ... A0A0D3DDW7 41330901
    983549 9gyt:1t (2.11) BS01 rna N/A N/A N/A 41330901
    983550 9gyt:1u (2.11) BS01 rna N/A N/A N/A 41330901
    983551 9gyt:1v (2.11) BS01 rna N/A N/A N/A 41330901
    983552 9gyt:A (2.11) BS01 peptide N/A GO:0003735 ... A0A0D3CN01 41330901
    983553 9gyt:A (2.11) BS02 rna N/A GO:0003735 ... A0A0D3CN01 41330901
    983554 9gyt:B (2.11) BS01 rna N/A GO:0003723 ... A0A068BCX1 41330901
    983555 9gyt:C (2.11) BS01 rna N/A GO:0003723 ... N/A 41330901
    983556 9gyt:D (2.11) BS01 rna N/A GO:0003723 ... A0A0D3AS28 41330901
    983557 9gyt:E (2.11) BS01 rna N/A GO:0003735 ... A0A0D3CIR5 41330901
    983558 9gyt:F (2.11) BS01 rna N/A GO:0003723 ... A0A068BEX5 41330901
    983559 9gyt:G (2.11) BS01 rna N/A GO:0003735 ... N/A 41330901
    983560 9gyt:H (2.11) BS01 rna N/A GO:0003735 ... N/A 41330901
    983561 9gyt:I (2.11) BS01 rna N/A GO:0003735 ... A0A0D3CHA1 41330901
    983562 9gyt:J (2.11) BS01 rna N/A GO:0003735 ... N/A 41330901
    983563 9gyt:K (2.11) BS01 rna N/A GO:0003735 ... N/A 41330901
    983564 9gyt:L (2.11) BS01 rna N/A GO:0003676 ... A0A0D3D1F0 41330901
    983565 9gyt:M (2.11) BS01 rna N/A GO:0003735 ... N/A 41330901
    983566 9gyt:N (2.11) BS01 rna N/A GO:0003735 ... A0A0D3D1Z7 41330901
    983567 9gyt:N (2.11) BS02 rna N/A GO:0003735 ... A0A0D3D1Z7 41330901
    983568 9gyt:O (2.11) BS01 rna N/A GO:0003735 ... A0A0D3ALM2 41330901
    983569 9gyt:P (2.11) BS01 rna N/A GO:0003735 ... N/A 41330901
    983570 9gyt:Q (2.11) BS01 rna N/A GO:0003735 ... N/A 41330901
    983571 9gyt:R (2.11) BS01 rna N/A GO:0003676 ... P39697 41330901
    983572 9gyt:S (2.11) BS01 peptide N/A GO:0003735 ... A0A0D3AW14 41330901
    983573 9gyt:S (2.11) BS02 rna N/A GO:0003735 ... A0A0D3AW14 41330901
    983574 9gyt:T (2.11) BS01 rna N/A GO:0005840 ... A0A0D3C0Z4 41330901
    983575 9gyt:U (2.11) BS01 peptide N/A N/A N/A 41330901
    983576 9gyt:U (2.11) BS02 rna N/A N/A N/A 41330901
    983577 9gyt:V (2.11) BS01 rna N/A N/A N/A 41330901
    983578 9gyt:W (2.11) BS01 rna N/A GO:0003735 ... A0A0D3CAV8 41330901
    983579 9gyt:W (2.11) BS02 ATP N/A GO:0003735 ... A0A0D3CAV8 41330901
    983580 9gyt:X (2.11) BS01 rna N/A N/A N/A 41330901
    983581 9gyt:Y (2.11) BS01 rna N/A N/A N/A 41330901
    983582 9gyt:Z (2.11) BS01 rna N/A GO:0003735 ... N/A 41330901
    983583 9gyt:a (2.11) BS01 rna N/A GO:0003735 ... N/A 41330901
    983584 9gyt:b (2.11) BS01 rna N/A GO:0003735 ... N/A 41330901
    983585 9gyt:d (2.11) BS01 rna N/A N/A N/A 41330901
    983586 9gyt:e (2.11) BS01 rna N/A GO:0005739 ... A0A0D3BFU2 41330901
    983587 9gyt:g (2.11) BS01 rna N/A GO:0003729 ... Q8LPF1 41330901
    983588 9gyt:h (2.11) BS01 rna N/A N/A N/A 41330901
    983589 9gyt:j (2.11) BS01 rna N/A N/A N/A 41330901
    983590 9gyt:l (2.11) BS01 rna N/A GO:0003729 ... P0C896 41330901
    983591 9gyu:A (1.1) BS01 FES N/A GO:0009055 ... P00221 40347495
    983592 9gyy:A (1.5) BS01 FE N/A N/A D5E1T1 39956340
    983593 9gyy:B (1.5) BS01 FE N/A N/A D5E1T1 39956340
    983594 9gyz:A (2.1) BS01 FE N/A N/A D5E1T1 39956340
    983595 9gyz:B (2.1) BS01 FE N/A N/A D5E1T1 39956340
    983596 9gz0:A (1.02) BS01 SF4 N/A GO:0005506 ... P07598 40347495
    983597 9gz0:A (1.02) BS02 SF4 N/A GO:0005506 ... P07598 40347495
    983598 9gz0:A (1.02) BS03 SF4 N/A GO:0005506 ... P07598 40347495
    983599 9gz0:A (1.02) BS04 4WW N/A GO:0005506 ... P07598 40347495
    983600 9gz1:A (3.7) BS01 MG N/A GO:0003774 ... P12883 39990378

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).