SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    983601 9gz1:A (3.7) BS02 ADP N/A GO:0003774 ... P12883 39990378
    983602 9gz1:A (3.7) BS03 XB2 N/A GO:0003774 ... P12883 39990378
    983603 9gz1:B (3.7) BS01 MG N/A GO:0003774 ... P12883 39990378
    983604 9gz1:B (3.7) BS02 ADP N/A GO:0003774 ... P12883 39990378
    983605 9gz1:B (3.7) BS03 XB2 N/A GO:0003774 ... P12883 39990378
    983606 9gz1:D (3.7) BS01 MG N/A GO:0005509 ... P97457 39990378
    983607 9gz1:F (3.7) BS01 MG N/A GO:0005509 ... P97457 39990378
    983608 9gz2:A (2.9) BS01 MG N/A GO:0003774 ... P12883 39990378
    983609 9gz2:A (2.9) BS02 ADP N/A GO:0003774 ... P12883 39990378
    983610 9gz2:A (2.9) BS03 XB2 N/A GO:0003774 ... P12883 39990378
    983611 9gz3:A (3.4) BS01 MG N/A GO:0003774 ... P12883 39990378
    983612 9gz3:A (3.4) BS02 ADP N/A GO:0003774 ... P12883 39990378
    983613 9gz4:A (0.96) BS01 SF4 N/A GO:0005506 ... P07598 40347495
    983614 9gz4:A (0.96) BS02 SF4 N/A GO:0005506 ... P07598 40347495
    983615 9gz4:A (0.96) BS03 SF4 N/A GO:0005506 ... P07598 40347495
    983616 9gz4:A (0.96) BS04 4WW N/A GO:0005506 ... P07598 40347495
    983617 9gz5:A (1.55) BS01 ZN N/A GO:0004407 ... Q8F254 N/A
    983618 9gz5:A (1.55) BS02 A1IRB N/A GO:0004407 ... Q8F254 N/A
    983619 9gz7:A (1.8) BS01 A1IQ8 N/A GO:0003677 ... P37231 N/A
    983620 9gz7:B (1.8) BS01 A1IQ8 N/A GO:0003677 ... P37231 N/A
    983621 9gz8:A (2.2) BS01 A1IQ7 N/A GO:0003677 ... P37231 N/A
    983622 9gz8:B (2.2) BS01 A1IQ7 N/A GO:0003677 ... P37231 N/A
    983623 9gz9:A (2.1) BS01 A1IQ6 N/A GO:0003677 ... P37231 N/A
    983624 9gz9:B (2.1) BS01 A1IQ6 N/A GO:0003677 ... P37231 N/A
    983625 9gza:A (1.9) BS01 A1IQ5 N/A GO:0003677 ... P37231 N/A
    983626 9gza:B (1.9) BS01 A1IQ5 N/A GO:0003677 ... P37231 N/A
    983627 9gzb:A (2.2) BS01 A1IQ4 N/A GO:0003677 ... P37231 N/A
    983628 9gzb:B (2.2) BS01 A1IQ4 N/A GO:0003677 ... P37231 N/A
    983629 9gzc:A (2.3) BS01 A1IQ3 N/A GO:0003677 ... P37231 N/A
    983630 9gzc:B (2.3) BS01 A1IQ3 N/A GO:0003677 ... P37231 N/A
    983631 9gze:A (2.2) BS01 A1IRD N/A GO:0003677 ... P37231 N/A
    983632 9gze:B (2.2) BS01 A1IRD N/A GO:0003677 ... P37231 N/A
    983633 9gzf:B (2.65) BS01 A1IQ2 N/A GO:0003677 ... P37231 N/A
    983634 9gzh:A (2.2) BS01 A1IRC N/A GO:0004672 ... P16234 39841084
    983635 9gzi:A (2.7) BS01 A1IRA N/A GO:0003677 ... P37231 N/A
    983636 9gzi:B (2.7) BS01 A1IRA N/A GO:0003677 ... P37231 N/A
    983637 9gzj:A (2.34) BS01 A1IRZ N/A GO:0003824 ... A0A0H3GFS8 39746981
    983638 9gzj:A (2.34) BS02 A1IRZ N/A GO:0003824 ... A0A0H3GFS8 39746981
    983639 9gzj:A (2.34) BS03 MG N/A GO:0003824 ... A0A0H3GFS8 39746981
    983640 9gzj:A (2.34) BS04 MG N/A GO:0003824 ... A0A0H3GFS8 39746981
    983641 9gzj:B (2.34) BS01 MG N/A GO:0003824 ... A0A0H3GFS8 39746981
    983642 9gzj:B (2.34) BS02 A1IRZ N/A GO:0003824 ... A0A0H3GFS8 39746981
    983643 9gzj:B (2.34) BS03 MG N/A GO:0003824 ... A0A0H3GFS8 39746981
    983644 9gzk:A (2.52) BS01 A1IR6 N/A GO:0003824 ... A0A0H3GFS8 39746981
    983645 9gzk:A (2.52) BS02 MG N/A GO:0003824 ... A0A0H3GFS8 39746981
    983646 9gzk:A (2.52) BS03 MG N/A GO:0003824 ... A0A0H3GFS8 39746981
    983647 9gzk:B (2.52) BS01 A1IR6 N/A GO:0003824 ... A0A0H3GFS8 39746981
    983648 9gzk:B (2.52) BS02 A1IR6 N/A GO:0003824 ... A0A0H3GFS8 39746981
    983649 9gzk:B (2.52) BS03 MG N/A GO:0003824 ... A0A0H3GFS8 39746981
    983650 9gzk:C (2.52) BS01 A1IR6 N/A GO:0003824 ... A0A0H3GFS8 39746981
    983651 9gzk:C (2.52) BS02 MG N/A GO:0003824 ... A0A0H3GFS8 39746981
    983652 9gzk:C (2.52) BS03 MG N/A GO:0003824 ... A0A0H3GFS8 39746981
    983653 9gzk:D (2.52) BS01 MG N/A GO:0003824 ... A0A0H3GFS8 39746981
    983654 9gzk:D (2.52) BS02 A1IR6 N/A GO:0003824 ... A0A0H3GFS8 39746981
    983655 9gzk:D (2.52) BS03 MG N/A GO:0003824 ... A0A0H3GFS8 39746981
    983656 9gzk:E (2.52) BS01 A1IR6 N/A GO:0003824 ... A0A0H3GFS8 39746981
    983657 9gzk:E (2.52) BS02 MG N/A GO:0003824 ... A0A0H3GFS8 39746981
    983658 9gzk:E (2.52) BS03 MG N/A GO:0003824 ... A0A0H3GFS8 39746981
    983659 9gzk:F (2.52) BS01 MG N/A GO:0003824 ... A0A0H3GFS8 39746981
    983660 9gzk:F (2.52) BS02 A1IR6 N/A GO:0003824 ... A0A0H3GFS8 39746981
    983661 9gzk:F (2.52) BS03 A1IR6 N/A GO:0003824 ... A0A0H3GFS8 39746981
    983662 9gzl:A (1.02) BS01 SF4 N/A GO:0005506 ... P07598 40347495
    983663 9gzl:A (1.02) BS02 SF4 N/A GO:0005506 ... P07598 40347495
    983664 9gzl:A (1.02) BS03 SF4 N/A GO:0005506 ... P07598 40347495
    983665 9gzm:A (3.4) BS01 dna N/A GO:0000175 ... O00411 40712586
    983666 9gzm:A (3.4) BS02 dna N/A GO:0000175 ... O00411 40712586
    983667 9gzm:A (3.4) BS03 rna N/A GO:0000175 ... O00411 40712586
    983668 9gzm:A (3.4) BS04 GTP N/A GO:0000175 ... O00411 40712586
    983669 9gzm:A (3.4) BS05 MG N/A GO:0000175 ... O00411 40712586
    983670 9gzm:B (3.4) BS01 dna N/A GO:0000154 ... Q9H5Q4 40712586
    983671 9gzm:B (3.4) BS02 dna N/A GO:0000154 ... Q9H5Q4 40712586
    983672 9gzm:C (3.4) BS01 dna N/A N/A Q00059 40712586
    983673 9gzm:C (3.4) BS02 dna N/A N/A Q00059 40712586
    983674 9gzn:A (3.5) BS01 dna N/A GO:0000175 ... O00411 40712586
    983675 9gzn:A (3.5) BS02 dna N/A GO:0000175 ... O00411 40712586
    983676 9gzn:A (3.5) BS03 rna N/A GO:0000175 ... O00411 40712586
    983677 9gzn:A (3.5) BS04 GTP N/A GO:0000175 ... O00411 40712586
    983678 9gzn:A (3.5) BS05 MG N/A GO:0000175 ... O00411 40712586
    983679 9gzn:B (3.5) BS01 dna N/A GO:0000154 ... Q9H5Q4 40712586
    983680 9gzo:A (3.15) BS01 dna N/A GO:0000175 ... O00411 40712586
    983681 9gzo:A (3.15) BS02 dna N/A GO:0000175 ... O00411 40712586
    983682 9gzo:A (3.15) BS03 rna N/A GO:0000175 ... O00411 40712586
    983683 9gzo:B (3.15) BS01 dna N/A GO:0000154 ... Q9H5Q4 40712586
    983684 9gzo:B (3.15) BS02 dna N/A GO:0000154 ... Q9H5Q4 40712586
    983685 9gzq:A (3.626) BS01 FES N/A GO:0003954 ... O34720 40855134
    983686 9gzq:A (3.626) BS02 SF4 N/A GO:0003954 ... O34720 40855134
    983687 9gzq:A (3.626) BS03 SF4 N/A GO:0003954 ... O34720 40855134
    983688 9gzq:A (3.626) BS04 SF4 N/A GO:0003954 ... O34720 40855134
    983689 9gzq:A (3.626) BS05 SF4 N/A GO:0003954 ... O34720 40855134
    983690 9gzq:A (3.626) BS06 MGD N/A GO:0003954 ... O34720 40855134
    983691 9gzq:A (3.626) BS07 MGD N/A GO:0003954 ... O34720 40855134
    983692 9gzq:A (3.626) BS08 4MO N/A GO:0003954 ... O34720 40855134
    983693 9gzv:A (1.95) BS01 A1IRF N/A GO:0005515 ... O95848 N/A
    983694 9gzv:A (1.95) BS02 A1IRF N/A GO:0005515 ... O95848 N/A
    983695 9gzv:A (1.95) BS03 MG N/A GO:0005515 ... O95848 N/A
    983696 9gzv:A (1.95) BS04 A1IRF N/A GO:0005515 ... O95848 N/A
    983697 9gzv:B (1.95) BS01 A1IRF N/A GO:0005515 ... O95848 N/A
    983698 9h02:A (2.03) BS01 01K N/A GO:0004402 ... Q92793 N/A
    983699 9h03:A (2.1) BS01 CA N/A GO:0003824 ... M7MZT8 N/A
    983700 9h03:A (2.1) BS02 DUC N/A GO:0003824 ... M7MZT8 N/A
    983701 9h03:B (2.1) BS01 CA N/A GO:0003824 ... M7MZT8 N/A
    983702 9h03:B (2.1) BS02 DUC N/A GO:0003824 ... M7MZT8 N/A
    983703 9h04:A (1.9) BS01 SAH N/A N/A A0A0C3QM78 41381393
    983704 9h04:A (1.9) BS02 A1IRH N/A N/A A0A0C3QM78 41381393
    983705 9h05:A (1.7) BS01 SAH N/A N/A A0A0C3QM78 41381393
    983706 9h06:A (1.86) BS01 SFG N/A N/A A0A0C3QM78 41381393
    983707 9h06:A (1.86) BS02 A1IRH N/A N/A A0A0C3QM78 41381393
    983708 9h07:A (2.41) BS01 SAH N/A N/A A0A0C3QM78 41381393
    983709 9h07:A (2.41) BS02 A1IRH N/A N/A A0A0C3QM78 41381393
    983710 9h08:A (2.36) BS01 SAH N/A N/A A0A0C3QM78 41381393
    983711 9h09:A (2.56) BS01 SFG N/A N/A A0A0C3QM78 41381393
    983712 9h09:A (2.56) BS02 A1IRH N/A N/A A0A0C3QM78 41381393
    983713 9h0a:A (2.1) BS01 A1IRI N/A N/A W7K8C0 N/A
    983714 9h0b:B (2.25) BS01 ZN N/A GO:0005576 ... P22412 41073662
    983715 9h0b:B (2.25) BS02 ZN N/A GO:0005576 ... P22412 41073662
    983716 9h0b:C (2.25) BS01 ZN N/A GO:0005576 ... P22412 41073662
    983717 9h0b:C (2.25) BS02 ZN N/A GO:0005576 ... P22412 41073662
    983718 9h0f:A (2.09) BS01 A1IRW N/A GO:0008233 ... P0DTC1 40220677
    983719 9h0f:B (2.09) BS01 A1IRW N/A GO:0008233 ... P0DTC1 40220677
    983720 9h0h:A (1.66) BS01 A1IRJ N/A GO:0004864 ... A0A067E666 40714839
    983721 9h0h:B (1.66) BS01 MN N/A GO:0004722 ... Q9CAJ0 40714839
    983722 9h0h:B (1.66) BS02 MN N/A GO:0004722 ... Q9CAJ0 40714839
    983723 9h0h:B (1.66) BS03 MN N/A GO:0004722 ... Q9CAJ0 40714839
    983724 9h0i:A (1.551) BS01 A1IRN N/A GO:0004864 ... A0A067E666 40714839
    983725 9h0i:B (1.551) BS01 MN N/A GO:0004722 ... Q9CAJ0 40714839
    983726 9h0i:B (1.551) BS02 MN N/A GO:0004722 ... Q9CAJ0 40714839
    983727 9h0i:B (1.551) BS03 MN N/A GO:0004722 ... Q9CAJ0 40714839
    983728 9h0j:A (1.96) BS01 A1IRN N/A GO:0004864 ... A0A067E666 40714839
    983729 9h0j:B (1.96) BS01 MN N/A GO:0004722 ... Q9CAJ0 40714839
    983730 9h0j:B (1.96) BS02 MN N/A GO:0004722 ... Q9CAJ0 40714839
    983731 9h0j:B (1.96) BS03 MN N/A GO:0004722 ... Q9CAJ0 40714839
    983732 9h0k:A (1.75) BS01 1VU N/A GO:0004402 ... Q92793 N/A
    983733 9h0k:B (1.75) BS01 1VU N/A GO:0004402 ... Q92793 N/A
    983734 9h0l:0 (2.49) BS01 rna N/A GO:0000027 ... P0A7N9 40571681
    983735 9h0l:1 (2.49) BS01 rna N/A GO:0002181 ... P0A7P5 40571681
    983736 9h0l:2 (2.49) BS01 rna N/A GO:0002181 ... P0A7Q1 40571681
    983737 9h0l:3 (2.49) BS01 rna N/A GO:0002181 ... P0A7Q6 40571681
    983738 9h0l:3 (2.49) BS02 ZN N/A GO:0002181 ... P0A7Q6 40571681
    983739 9h0l:4 (2.49) BS01 rna N/A GO:0002181 ... P0A7M9 40571681
    983740 9h0l:4 (2.49) BS02 ZN N/A GO:0002181 ... P0A7M9 40571681
    983741 9h0l:B (2.49) BS01 rna N/A GO:0000028 ... P0A7V0 40571681
    983742 9h0l:C (2.49) BS01 rna N/A GO:0000028 ... P0A7V3 40571681
    983743 9h0l:D (2.49) BS01 rna N/A GO:0000028 ... P0A7V8 40571681
    983744 9h0l:E (2.49) BS01 rna N/A GO:0000028 ... P0A7W1 40571681
    983745 9h0l:F (2.49) BS01 rna N/A GO:0002181 ... P02358 40571681
    983746 9h0l:G (2.49) BS01 rna N/A GO:0000028 ... P02359 40571681
    983747 9h0l:G (2.49) BS02 rna N/A GO:0000028 ... P02359 40571681
    983748 9h0l:H (2.49) BS01 rna N/A GO:0000028 ... P0A7W7 40571681
    983749 9h0l:I (2.49) BS01 rna N/A GO:0002181 ... P0A7X3 40571681
    983750 9h0l:I (2.49) BS02 rna N/A GO:0002181 ... P0A7X3 40571681
    983751 9h0l:J (2.49) BS01 rna N/A GO:0000049 ... P0A7R5 40571681
    983752 9h0l:K (2.49) BS01 rna N/A GO:0002181 ... P0A7R9 40571681
    983753 9h0l:L (2.49) BS01 rna N/A GO:0000049 ... P0A7S3 40571681
    983754 9h0l:L (2.49) BS02 rna N/A GO:0000049 ... P0A7S3 40571681
    983755 9h0l:M (2.49) BS01 rna N/A GO:0000049 ... P0A7S9 40571681
    983756 9h0l:N (2.49) BS01 rna N/A GO:0000028 ... P0AG59 40571681
    983757 9h0l:O (2.49) BS01 rna N/A GO:0000028 ... P0ADZ4 40571681
    983758 9h0l:O (2.49) BS02 rna N/A GO:0000028 ... P0ADZ4 40571681
    983759 9h0l:P (2.49) BS01 rna N/A GO:0000028 ... P0A7T3 40571681
    983760 9h0l:Q (2.49) BS01 rna N/A GO:0000028 ... P0AG63 40571681
    983761 9h0l:R (2.49) BS01 rna N/A GO:0002181 ... P0A7T7 40571681
    983762 9h0l:S (2.49) BS01 rna N/A GO:0002181 ... P0A7U3 40571681
    983763 9h0l:T (2.49) BS01 rna N/A GO:0000028 ... P0A7U7 40571681
    983764 9h0l:U (2.49) BS01 rna N/A GO:0000028 ... P68679 40571681
    983765 9h0l:c (2.49) BS01 rna N/A GO:0000027 ... P60422 40571681
    983766 9h0l:c (2.49) BS02 rna N/A GO:0000027 ... P60422 40571681
    983767 9h0l:d (2.49) BS01 rna N/A GO:0000027 ... P60438 40571681
    983768 9h0l:e (2.49) BS01 rna N/A GO:0001070 ... P60723 40571681
    983769 9h0l:f (2.49) BS01 rna N/A GO:0000027 ... P62399 40571681
    983770 9h0l:f (2.49) BS02 rna N/A GO:0000027 ... P62399 40571681
    983771 9h0l:f (2.49) BS03 rna N/A GO:0000027 ... P62399 40571681
    983772 9h0l:g (2.49) BS01 rna N/A GO:0000027 ... P0AG55 40571681
    983773 9h0l:h (2.49) BS01 rna N/A GO:0002181 ... P0A7R1 40571681
    983774 9h0l:i (2.49) BS01 rna N/A GO:0002181 ... P0AA10 40571681
    983775 9h0l:j (2.49) BS01 rna N/A GO:0002181 ... P0ADY3 40571681
    983776 9h0l:j (2.49) BS02 rna N/A GO:0002181 ... P0ADY3 40571681
    983777 9h0l:k (2.49) BS01 rna N/A GO:0002181 ... P02413 40571681
    983778 9h0l:l (2.49) BS01 rna N/A GO:0000027 ... P0ADY7 40571681
    983779 9h0l:l (2.49) BS02 rna N/A GO:0000027 ... P0ADY7 40571681
    983780 9h0l:l (2.49) BS03 rna N/A GO:0000027 ... P0ADY7 40571681
    983781 9h0l:m (2.49) BS01 rna N/A GO:0000027 ... P0AG44 40571681
    983782 9h0l:n (2.49) BS01 rna N/A GO:0002181 ... P0C018 40571681
    983783 9h0l:n (2.49) BS02 rna N/A GO:0002181 ... P0C018 40571681
    983784 9h0l:o (2.49) BS01 rna N/A GO:0000027 ... P0A7K6 40571681
    983785 9h0l:o (2.49) BS02 rna N/A GO:0000027 ... P0A7K6 40571681
    983786 9h0l:p (2.49) BS01 rna N/A GO:0000027 ... P0A7L3 40571681
    983787 9h0l:q (2.49) BS01 rna N/A GO:0002181 ... P0AG48 40571681
    983788 9h0l:r (2.49) BS01 rna N/A GO:0002181 ... P61175 40571681
    983789 9h0l:s (2.49) BS01 rna N/A GO:0000027 ... P0ADZ0 40571681
    983790 9h0l:t (2.49) BS01 rna N/A GO:0000027 ... P60624 40571681
    983791 9h0l:u (2.49) BS01 rna N/A GO:0000027 ... P68919 40571681
    983792 9h0l:v (2.49) BS01 rna N/A GO:0000027 ... P0A7L8 40571681
    983793 9h0l:v (2.49) BS02 rna N/A GO:0000027 ... P0A7L8 40571681
    983794 9h0l:w (2.49) BS01 rna N/A GO:0000027 ... P0A7M2 40571681
    983795 9h0l:x (2.49) BS01 rna N/A GO:0000027 ... P0A7M6 40571681
    983796 9h0l:y (2.49) BS01 rna N/A GO:0000027 ... P0AG51 40571681
    983797 9h0l:y (2.49) BS02 rna N/A GO:0000027 ... P0AG51 40571681
    983798 9h0l:z (2.49) BS01 rna N/A GO:0000027 ... P0A7N4 40571681
    983799 9h0m:A (2.64) BS01 HEM N/A GO:0005344 ... P01994 N/A
    983800 9h0m:B (2.64) BS01 HEM N/A GO:0005344 ... P02112 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).