SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 4912 4913 4914 4915 4916 4917 4918 4919 4920 4921 4922 4923 4924 4925 4926 4927 4928 4929 4930 4931 4932 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    984201 9h1c:A (1.8) BS03 ZN N/A GO:0006508 ... P12821 40168649
    984202 9h1d:A (1.8) BS01 MAN N/A GO:0006508 ... P12821 40168649
    984203 9h1d:A (1.8) BS02 FUC N/A GO:0006508 ... P12821 40168649
    984204 9h1d:A (1.8) BS03 A1IRR N/A GO:0006508 ... P12821 40168649
    984205 9h1d:A (1.8) BS04 ZN N/A GO:0006508 ... P12821 40168649
    984206 9h1e:A (1.45) BS01 FUC N/A GO:0006508 ... P12821 40168649
    984207 9h1e:A (1.45) BS02 ZN N/A GO:0006508 ... P12821 40168649
    984208 9h1e:A (1.45) BS03 A1IRS N/A GO:0006508 ... P12821 40168649
    984209 9h1g:A (3.07) BS01 ZN N/A GO:0000166 ... Q8JMN0 40804239
    984210 9h1g:A (3.07) BS02 ZN N/A GO:0000166 ... Q8JMN0 40804239
    984211 9h1h:A (3.06) BS01 dna N/A GO:0004519 ... G3ECR3 41702403
    984212 9h1h:A (3.06) BS02 dna N/A GO:0004519 ... G3ECR3 41702403
    984213 9h1h:A (3.06) BS03 dna N/A GO:0004519 ... G3ECR3 41702403
    984214 9h1h:A (3.06) BS04 CA N/A GO:0004519 ... G3ECR3 41702403
    984215 9h1h:B (3.06) BS01 dna N/A GO:0004519 ... G3ECR2 41702403
    984216 9h1h:C (3.06) BS01 dna N/A GO:0004519 ... G3ECR2 41702403
    984217 9h1h:C (3.06) BS02 dna N/A GO:0004519 ... G3ECR2 41702403
    984218 9h1h:D (3.06) BS01 dna N/A GO:0004519 ... G3ECR3 41702403
    984219 9h1h:D (3.06) BS02 dna N/A GO:0004519 ... G3ECR3 41702403
    984220 9h1h:D (3.06) BS03 CA N/A GO:0004519 ... G3ECR3 41702403
    984221 9h1h:E (3.06) BS01 dna N/A GO:0004519 ... G3ECR2 41702403
    984222 9h1h:F (3.06) BS01 dna N/A GO:0004519 ... G3ECR2 41702403
    984223 9h1h:F (3.06) BS02 dna N/A GO:0004519 ... G3ECR2 41702403
    984224 9h1k:A (1.895) BS01 rna N/A GO:0003723 ... Q72GY4 40444636
    984225 9h1k:A (1.895) BS02 SAH N/A GO:0003723 ... Q72GY4 40444636
    984226 9h1k:B (1.895) BS01 rna N/A GO:0003723 ... Q72GY4 40444636
    984227 9h1k:B (1.895) BS02 SAH N/A GO:0003723 ... Q72GY4 40444636
    984228 9h1l:A (2.14) BS01 F43 N/A GO:0005737 ... A0A2L1CBG2 40240609
    984229 9h1l:B (2.14) BS01 F43 N/A GO:0005737 ... A0A2L1CBG2 40240609
    984230 9h1l:C (2.14) BS01 F43 N/A GO:0005737 ... A0A2L1CBB0 40240609
    984231 9h1l:C (2.14) BS02 F43 N/A GO:0005737 ... A0A2L1CBB0 40240609
    984232 9h1l:C (2.14) BS03 COM N/A GO:0005737 ... A0A2L1CBB0 40240609
    984233 9h1l:C (2.14) BS04 TP7 N/A GO:0005737 ... A0A2L1CBB0 40240609
    984234 9h1l:D (2.14) BS01 F43 N/A GO:0005737 ... A0A2L1CBB3 40240609
    984235 9h1l:D (2.14) BS02 COM N/A GO:0005737 ... A0A2L1CBB3 40240609
    984236 9h1l:D (2.14) BS03 TP7 N/A GO:0005737 ... A0A2L1CBB3 40240609
    984237 9h1l:F (2.14) BS01 F43 N/A GO:0005737 ... A0A2L1CBB0 40240609
    984238 9h1l:F (2.14) BS02 F43 N/A GO:0005737 ... A0A2L1CBB0 40240609
    984239 9h1l:F (2.14) BS03 TP7 N/A GO:0005737 ... A0A2L1CBB0 40240609
    984240 9h1l:F (2.14) BS04 SHT N/A GO:0005737 ... A0A2L1CBB0 40240609
    984241 9h1l:G (2.14) BS01 S5Q N/A N/A G0H411 40240609
    984242 9h1l:H (2.14) BS01 S5Q N/A N/A A0A2L1C9H0 40240609
    984243 9h1l:H (2.14) BS02 S5Q N/A N/A A0A2L1C9H0 40240609
    984244 9h1l:I (2.14) BS01 S5Q N/A GO:0015948 ... G0H3B1 40240609
    984245 9h1l:I (2.14) BS02 S5Q N/A GO:0015948 ... G0H3B1 40240609
    984246 9h1l:K (2.14) BS01 ZN N/A GO:0005524 ... A0A2L1C9A1 40240609
    984247 9h1l:K (2.14) BS02 ATP N/A GO:0005524 ... A0A2L1C9A1 40240609
    984248 9h1l:K (2.14) BS03 ATP N/A GO:0005524 ... A0A2L1C9A1 40240609
    984249 9h1l:K (2.14) BS04 MG N/A GO:0005524 ... A0A2L1C9A1 40240609
    984250 9h1l:K (2.14) BS05 MG N/A GO:0005524 ... A0A2L1C9A1 40240609
    984251 9h1m:A (1.63) BS01 HEM N/A GO:0004601 ... P00433 40053124
    984252 9h1m:A (1.63) BS02 CA N/A GO:0004601 ... P00433 40053124
    984253 9h1m:A (1.63) BS03 CA N/A GO:0004601 ... P00433 40053124
    984254 9h1m:A (1.63) BS04 EDO N/A GO:0004601 ... P00433 40053124
    984255 9h1m:A (1.63) BS05 EDO N/A GO:0004601 ... P00433 40053124
    984256 9h1m:A (1.63) BS06 EDO N/A GO:0004601 ... P00433 40053124
    984257 9h1m:A (1.63) BS07 EDO N/A GO:0004601 ... P00433 40053124
    984258 9h1m:A (1.63) BS08 EDO N/A GO:0004601 ... P00433 40053124
    984259 9h1o:A (3.4) BS01 GTP N/A GO:0000226 ... P81947 41365297
    984260 9h1o:B (3.4) BS01 GTP N/A GO:0000226 ... P81947 41365297
    984261 9h1o:C (3.4) BS01 ZN N/A N/A Q92974 41365297
    984262 9h1o:C (3.4) BS02 ZN N/A N/A Q92974 41365297
    984263 9h1o:D (3.4) BS01 GDP N/A GO:0000226 ... Q6B856 41365297
    984264 9h1o:D (3.4) BS02 TA1 N/A GO:0000226 ... Q6B856 41365297
    984265 9h1o:E (3.4) BS01 GDP N/A GO:0000226 ... Q6B856 41365297
    984266 9h1o:E (3.4) BS02 TA1 N/A GO:0000226 ... Q6B856 41365297
    984267 9h1o:F (3.4) BS01 GDP N/A GO:0000226 ... Q6B856 41365297
    984268 9h1o:F (3.4) BS02 TA1 N/A GO:0000226 ... Q6B856 41365297
    984269 9h1o:G (3.4) BS01 GDP N/A GO:0000226 ... Q6B856 41365297
    984270 9h1o:G (3.4) BS02 TA1 N/A GO:0000226 ... Q6B856 41365297
    984271 9h1p:A (3.1) BS01 peptide N/A GO:0005198 ... P12493 40011770
    984272 9h1p:C (3.1) BS01 peptide N/A GO:0005198 ... P12493 40011770
    984273 9h1p:E (3.1) BS01 peptide N/A GO:0005198 ... P12493 40011770
    984274 9h1p:G (3.1) BS01 peptide N/A GO:0005198 ... P12493 40011770
    984275 9h1p:I (3.1) BS01 peptide N/A GO:0005198 ... P12493 40011770
    984276 9h1p:K (3.1) BS01 peptide N/A GO:0005198 ... P12493 40011770
    984277 9h1p:M (3.1) BS01 peptide N/A GO:0005198 ... P12493 40011770
    984278 9h1p:O (3.1) BS01 peptide N/A GO:0005198 ... P12493 40011770
    984279 9h1p:Q (3.1) BS01 peptide N/A GO:0005198 ... P12493 40011770
    984280 9h1p:S (3.1) BS01 peptide N/A GO:0005198 ... P12493 40011770
    984281 9h1p:U (3.1) BS01 peptide N/A GO:0005198 ... P12493 40011770
    984282 9h1p:W (3.1) BS01 peptide N/A GO:0005198 ... P12493 40011770
    984283 9h1q:A (2.95) BS01 ZN N/A GO:0000166 ... Q8JMN0 40804239
    984284 9h1s:A (3.0) BS01 ZN N/A GO:0005198 ... P17499 40413174
    984285 9h1s:B (3.0) BS01 ZN N/A GO:0005198 ... P17499 40413174
    984286 9h1u:A (2.86) BS01 HEM N/A GO:0004322 ... V6F8F5 N/A
    984287 9h1u:A (2.86) BS02 FE N/A GO:0004322 ... V6F8F5 N/A
    984288 9h1u:B (2.86) BS01 HEM N/A GO:0004322 ... V6F8F5 N/A
    984289 9h1u:B (2.86) BS02 FE N/A GO:0004322 ... V6F8F5 N/A
    984290 9h1u:C (2.86) BS01 HEM N/A GO:0004322 ... V6F8F5 N/A
    984291 9h1u:C (2.86) BS02 FE N/A GO:0004322 ... V6F8F5 N/A
    984292 9h1u:D (2.86) BS01 HEM N/A GO:0004322 ... V6F8F5 N/A
    984293 9h1u:D (2.86) BS02 FE N/A GO:0004322 ... V6F8F5 N/A
    984294 9h1u:E (2.86) BS01 HEM N/A GO:0004322 ... V6F8F5 N/A
    984295 9h1u:E (2.86) BS02 FE N/A GO:0004322 ... V6F8F5 N/A
    984296 9h1u:F (2.86) BS01 HEM N/A GO:0004322 ... V6F8F5 N/A
    984297 9h1u:F (2.86) BS02 FE N/A GO:0004322 ... V6F8F5 N/A
    984298 9h1u:G (2.86) BS01 HEM N/A GO:0004322 ... V6F8F5 N/A
    984299 9h1u:G (2.86) BS02 FE N/A GO:0004322 ... V6F8F5 N/A
    984300 9h1u:H (2.86) BS01 HEM N/A GO:0004322 ... V6F8F5 N/A
    984301 9h1u:H (2.86) BS02 FE N/A GO:0004322 ... V6F8F5 N/A
    984302 9h1u:I (2.86) BS01 FE N/A GO:0006826 ... N/A N/A
    984303 9h1u:J (2.86) BS01 FE N/A GO:0006826 ... N/A N/A
    984304 9h1u:K (2.86) BS01 FE N/A GO:0006826 ... N/A N/A
    984305 9h1u:L (2.86) BS01 FE N/A GO:0006826 ... N/A N/A
    984306 9h1u:M (2.86) BS01 FE N/A GO:0004322 ... Q6NE81 N/A
    984307 9h1u:M (2.86) BS02 FE N/A GO:0004322 ... Q6NE81 N/A
    984308 9h1u:N (2.86) BS01 FE N/A GO:0004322 ... Q6NE81 N/A
    984309 9h1u:N (2.86) BS02 FE N/A GO:0004322 ... Q6NE81 N/A
    984310 9h1u:O (2.86) BS01 FE N/A GO:0004322 ... Q6NE81 N/A
    984311 9h1u:O (2.86) BS02 FE N/A GO:0004322 ... Q6NE81 N/A
    984312 9h1u:P (2.86) BS01 FE N/A GO:0004322 ... Q6NE81 N/A
    984313 9h1u:Q (2.86) BS01 FE N/A GO:0004322 ... Q6NE81 N/A
    984314 9h1u:Q (2.86) BS02 FE N/A GO:0004322 ... Q6NE81 N/A
    984315 9h1u:R (2.86) BS01 FE N/A GO:0004322 ... Q6NE81 N/A
    984316 9h1u:R (2.86) BS02 FE N/A GO:0004322 ... Q6NE81 N/A
    984317 9h1u:S (2.86) BS01 FE N/A GO:0004322 ... Q6NE81 N/A
    984318 9h1u:T (2.86) BS01 FE N/A GO:0004322 ... Q6NE81 N/A
    984319 9h1u:T (2.86) BS02 FE N/A GO:0004322 ... Q6NE81 N/A
    984320 9h1u:U (2.86) BS01 FE N/A GO:0004322 ... Q6NE81 N/A
    984321 9h1u:U (2.86) BS02 FE N/A GO:0004322 ... Q6NE81 N/A
    984322 9h1u:V (2.86) BS01 FE N/A GO:0004322 ... Q6NE81 N/A
    984323 9h1u:V (2.86) BS02 FE N/A GO:0004322 ... Q6NE81 N/A
    984324 9h1u:W (2.86) BS01 FE N/A GO:0004322 ... Q6NE81 N/A
    984325 9h1u:W (2.86) BS02 FE N/A GO:0004322 ... Q6NE81 N/A
    984326 9h1u:X (2.86) BS01 FE N/A GO:0004322 ... Q6NE81 N/A
    984327 9h1u:X (2.86) BS02 FE N/A GO:0004322 ... Q6NE81 N/A
    984328 9h1v:A (2.89) BS01 dna N/A GO:0004519 ... G3ECR3 41702403
    984329 9h1v:A (2.89) BS02 dna N/A GO:0004519 ... G3ECR3 41702403
    984330 9h1v:A (2.89) BS03 dna N/A GO:0004519 ... G3ECR3 41702403
    984331 9h1v:A (2.89) BS04 CA N/A GO:0004519 ... G3ECR3 41702403
    984332 9h1v:B (2.89) BS01 dna N/A GO:0004519 ... G3ECR2 41702403
    984333 9h1v:B (2.89) BS02 dna N/A GO:0004519 ... G3ECR2 41702403
    984334 9h1v:B (2.89) BS03 dna N/A GO:0004519 ... G3ECR2 41702403
    984335 9h1v:C (2.89) BS01 dna N/A GO:0004519 ... G3ECR2 41702403
    984336 9h1v:C (2.89) BS02 dna N/A GO:0004519 ... G3ECR2 41702403
    984337 9h1v:C (2.89) BS03 dna N/A GO:0004519 ... G3ECR2 41702403
    984338 9h1v:C (2.89) BS04 dna N/A GO:0004519 ... G3ECR2 41702403
    984339 9h1v:D (2.89) BS01 dna N/A GO:0004519 ... G3ECR3 41702403
    984340 9h1v:D (2.89) BS02 dna N/A GO:0004519 ... G3ECR3 41702403
    984341 9h1v:D (2.89) BS03 dna N/A GO:0004519 ... G3ECR3 41702403
    984342 9h1v:D (2.89) BS04 dna N/A GO:0004519 ... G3ECR3 41702403
    984343 9h1v:D (2.89) BS05 CA N/A GO:0004519 ... G3ECR3 41702403
    984344 9h1v:E (2.89) BS01 dna N/A GO:0004519 ... G3ECR2 41702403
    984345 9h1v:E (2.89) BS02 dna N/A GO:0004519 ... G3ECR2 41702403
    984346 9h1v:E (2.89) BS03 dna N/A GO:0004519 ... G3ECR2 41702403
    984347 9h1v:F (2.89) BS01 dna N/A GO:0004519 ... G3ECR2 41702403
    984348 9h1v:F (2.89) BS02 dna N/A GO:0004519 ... G3ECR2 41702403
    984349 9h1v:F (2.89) BS03 dna N/A GO:0004519 ... G3ECR2 41702403
    984350 9h1v:F (2.89) BS04 dna N/A GO:0004519 ... G3ECR2 41702403
    984351 9h1w:A (2.2) BS01 RET N/A GO:0005216 ... P42196 40216733
    984352 9h1x:A (1.85) BS01 RET N/A GO:0005216 ... P42196 40216733
    984353 9h1y:A (3.07) BS01 ZN N/A GO:0000166 ... Q8JMN0 40804239
    984354 9h1y:A (3.07) BS02 ZN N/A GO:0000166 ... Q8JMN0 40804239
    984355 9h20:A (2.2) BS01 RET N/A GO:0005216 ... P42196 40216733
    984356 9h20:A (2.2) BS02 MPG N/A GO:0005216 ... P42196 40216733
    984357 9h21:A (3.33) BS01 rna N/A GO:0004519 ... G3ECR1 41702403
    984358 9h21:A (3.33) BS02 rna N/A GO:0004519 ... G3ECR1 41702403
    984359 9h22:AA (2.3) BS01 BCL N/A GO:0005886 ... A0A6M4IQ17 41342568
    984360 9h22:AA (2.3) BS02 V7N N/A GO:0005886 ... A0A6M4IQ17 41342568
    984361 9h22:AA (2.3) BS03 BCL N/A GO:0005886 ... A0A6M4IQ17 41342568
    984362 9h22:AA (2.3) BS04 BCL N/A GO:0005886 ... A0A6M4IQ17 41342568
    984363 9h22:AA (2.3) BS05 BCL N/A GO:0005886 ... A0A6M4IQ17 41342568
    984364 9h22:AB (2.3) BS01 BCL N/A GO:0005886 ... A0A6M4IQ17 41342568
    984365 9h22:AB (2.3) BS02 V7N N/A GO:0005886 ... A0A6M4IQ17 41342568
    984366 9h22:AB (2.3) BS03 BCL N/A GO:0005886 ... A0A6M4IQ17 41342568
    984367 9h22:AB (2.3) BS04 BCL N/A GO:0005886 ... A0A6M4IQ17 41342568
    984368 9h22:AC (2.3) BS01 BCL N/A GO:0005886 ... A0A6M4IQ17 41342568
    984369 9h22:AC (2.3) BS02 BCL N/A GO:0005886 ... A0A6M4IQ17 41342568
    984370 9h22:AC (2.3) BS03 BCL N/A GO:0005886 ... A0A6M4IQ17 41342568
    984371 9h22:AC (2.3) BS04 V7N N/A GO:0005886 ... A0A6M4IQ17 41342568
    984372 9h22:AD (2.3) BS01 BCL N/A GO:0005886 ... A0A6M4IQ17 41342568
    984373 9h22:AD (2.3) BS02 BCL N/A GO:0005886 ... A0A6M4IQ17 41342568
    984374 9h22:AD (2.3) BS03 V7N N/A GO:0005886 ... A0A6M4IQ17 41342568
    984375 9h22:AD (2.3) BS04 BCL N/A GO:0005886 ... A0A6M4IQ17 41342568
    984376 9h22:AE (2.3) BS01 V7N N/A GO:0005886 ... A0A6M4IQ17 41342568
    984377 9h22:AE (2.3) BS02 BCL N/A GO:0005886 ... A0A6M4IQ17 41342568
    984378 9h22:AE (2.3) BS03 V7N N/A GO:0005886 ... A0A6M4IQ17 41342568
    984379 9h22:AE (2.3) BS04 BCL N/A GO:0005886 ... A0A6M4IQ17 41342568
    984380 9h22:AE (2.3) BS05 BCL N/A GO:0005886 ... A0A6M4IQ17 41342568
    984381 9h22:AF (2.3) BS01 BCL N/A GO:0005886 ... A0A6M4IQ17 41342568
    984382 9h22:AF (2.3) BS02 BCL N/A GO:0005886 ... A0A6M4IQ17 41342568
    984383 9h22:AF (2.3) BS03 V7N N/A GO:0005886 ... A0A6M4IQ17 41342568
    984384 9h22:AF (2.3) BS04 BCL N/A GO:0005886 ... A0A6M4IQ17 41342568
    984385 9h22:AF (2.3) BS05 BCL N/A GO:0005886 ... A0A6M4IQ17 41342568
    984386 9h22:AG (2.3) BS01 V7N N/A GO:0005886 ... A0A6M4IQ17 41342568
    984387 9h22:AG (2.3) BS02 BCL N/A GO:0005886 ... A0A6M4IQ17 41342568
    984388 9h22:AG (2.3) BS03 V7N N/A GO:0005886 ... A0A6M4IQ17 41342568
    984389 9h22:AG (2.3) BS04 BCL N/A GO:0005886 ... A0A6M4IQ17 41342568
    984390 9h22:AG (2.3) BS05 BCL N/A GO:0005886 ... A0A6M4IQ17 41342568
    984391 9h22:AH (2.3) BS01 BCL N/A GO:0005886 ... A0A6M4IQ17 41342568
    984392 9h22:AH (2.3) BS02 BCL N/A GO:0005886 ... A0A6M4IQ17 41342568
    984393 9h22:AH (2.3) BS03 V7N N/A GO:0005886 ... A0A6M4IQ17 41342568
    984394 9h22:AH (2.3) BS04 BCL N/A GO:0005886 ... A0A6M4IQ17 41342568
    984395 9h22:AI (2.3) BS01 BCL N/A GO:0005886 ... A0A6M4IQ17 41342568
    984396 9h22:AI (2.3) BS02 V7N N/A GO:0005886 ... A0A6M4IQ17 41342568
    984397 9h22:AI (2.3) BS03 V7N N/A GO:0005886 ... A0A6M4IQ17 41342568
    984398 9h22:AI (2.3) BS04 BCL N/A GO:0005886 ... A0A6M4IQ17 41342568
    984399 9h22:AI (2.3) BS05 BCL N/A GO:0005886 ... A0A6M4IQ17 41342568
    984400 9h22:AJ (2.3) BS01 V7N N/A GO:0005886 ... A0A6M4IQ17 41342568

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).