SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    985401 9h4t:A (1.86) BS02 PGD N/A GO:0016491 ... P33225 39769096
    985402 9h4t:B (1.86) BS01 PGD N/A GO:0016491 ... P33225 39769096
    985403 9h4t:B (1.86) BS02 PGD N/A GO:0016491 ... P33225 39769096
    985404 9h4u:A (1.541) BS01 CA N/A GO:0001681 ... A0A918SDW1 40745183
    985405 9h4u:A (1.541) BS02 CA N/A GO:0001681 ... A0A918SDW1 40745183
    985406 9h4u:B (1.541) BS01 CA N/A GO:0001681 ... A0A918SDW1 40745183
    985407 9h4u:B (1.541) BS02 CA N/A GO:0001681 ... A0A918SDW1 40745183
    985408 9h4x:A (2.95) BS01 NAI N/A GO:0005737 ... P94527 N/A
    985409 9h4z:B (1.41) BS01 A1ISI N/A GO:0005737 ... P40261 40209950
    985410 9h4z:B (1.41) BS02 SAM N/A GO:0005737 ... P40261 40209950
    985411 9h4z:D (1.41) BS01 A1ISI N/A GO:0005737 ... P40261 40209950
    985412 9h4z:D (1.41) BS02 SAM N/A GO:0005737 ... P40261 40209950
    985413 9h59:B (3.4) BS01 A1ISP N/A GO:0005515 ... Q96SW2 N/A
    985414 9h59:C (3.4) BS01 A1ISP N/A GO:0000922 ... Q8TDX7 N/A
    985415 9h5b:BG (3.6) BS01 peptide N/A GO:0046872 ... A0A410N721 41042861
    985416 9h5b:BG (3.6) BS02 MG N/A GO:0046872 ... A0A410N721 41042861
    985417 9h5b:BG (3.6) BS03 MG N/A GO:0046872 ... A0A410N721 41042861
    985418 9h5b:BG (3.6) BS04 MG N/A GO:0046872 ... A0A410N721 41042861
    985419 9h5b:BG (3.6) BS05 ZN N/A GO:0046872 ... A0A410N721 41042861
    985420 9h5b:BG (3.6) BS06 ZN N/A GO:0046872 ... A0A410N721 41042861
    985421 9h5b:BH (3.6) BS01 peptide N/A GO:0046872 ... A0A410N721 41042861
    985422 9h5b:BH (3.6) BS02 ZN N/A GO:0046872 ... A0A410N721 41042861
    985423 9h5b:BH (3.6) BS03 ZN N/A GO:0046872 ... A0A410N721 41042861
    985424 9h5b:BH (3.6) BS04 MG N/A GO:0046872 ... A0A410N721 41042861
    985425 9h5b:BH (3.6) BS05 MG N/A GO:0046872 ... A0A410N721 41042861
    985426 9h5b:BH (3.6) BS06 MG N/A GO:0046872 ... A0A410N721 41042861
    985427 9h5b:BI (3.6) BS01 peptide N/A GO:0046872 ... A0A410N721 41042861
    985428 9h5b:BI (3.6) BS02 ZN N/A GO:0046872 ... A0A410N721 41042861
    985429 9h5b:BI (3.6) BS03 ZN N/A GO:0046872 ... A0A410N721 41042861
    985430 9h5b:BI (3.6) BS04 MG N/A GO:0046872 ... A0A410N721 41042861
    985431 9h5b:BI (3.6) BS05 MG N/A GO:0046872 ... A0A410N721 41042861
    985432 9h5e:A (1.896) BS01 SAH N/A GO:0005737 ... P40261 40209950
    985433 9h5e:A (1.896) BS02 A1ISJ N/A GO:0005737 ... P40261 40209950
    985434 9h5e:B (1.896) BS01 SAH N/A GO:0005737 ... P40261 40209950
    985435 9h5e:B (1.896) BS02 A1ISJ N/A GO:0005737 ... P40261 40209950
    985436 9h5e:C (1.896) BS01 SAH N/A GO:0005737 ... P40261 40209950
    985437 9h5e:C (1.896) BS02 A1ISJ N/A GO:0005737 ... P40261 40209950
    985438 9h5e:D (1.896) BS01 SAH N/A GO:0005737 ... P40261 40209950
    985439 9h5e:D (1.896) BS02 A1ISJ N/A GO:0005737 ... P40261 40209950
    985440 9h5e:E (1.896) BS01 SAH N/A GO:0005737 ... P40261 40209950
    985441 9h5e:E (1.896) BS02 A1ISJ N/A GO:0005737 ... P40261 40209950
    985442 9h5e:F (1.896) BS01 SAH N/A GO:0005737 ... P40261 40209950
    985443 9h5e:F (1.896) BS02 A1ISJ N/A GO:0005737 ... P40261 40209950
    985444 9h5h:A (1.74) BS01 A1ISF N/A GO:0046983 ... O75030 N/A
    985445 9h5h:B (1.74) BS01 A1ISF N/A GO:0046983 ... O75030 N/A
    985446 9h5h:C (1.74) BS01 A1ISF N/A GO:0046983 ... O75030 N/A
    985447 9h5k:A (3.2) BS01 ZN N/A GO:0000324 ... Q08281 41680390
    985448 9h5k:A (3.2) BS02 ZN N/A GO:0000324 ... Q08281 41680390
    985449 9h5k:A (3.2) BS03 ZN N/A GO:0000324 ... Q08281 41680390
    985450 9h5k:B (3.2) BS01 ZN N/A GO:0005515 ... P38164 41680390
    985451 9h5k:B (3.2) BS02 ZN N/A GO:0005515 ... P38164 41680390
    985452 9h5k:B (3.2) BS03 ZN N/A GO:0005515 ... P38164 41680390
    985453 9h5k:B (3.2) BS04 ZN N/A GO:0005515 ... P38164 41680390
    985454 9h5k:C (3.2) BS01 ZN N/A GO:0000329 ... Q03897 41680390
    985455 9h5k:C (3.2) BS02 ZN N/A GO:0000329 ... Q03897 41680390
    985456 9h5k:C (3.2) BS03 ZN N/A GO:0000329 ... Q03897 41680390
    985457 9h5k:G (3.2) BS01 ZN N/A GO:0005515 ... P38164 41680390
    985458 9h5k:G (3.2) BS02 ZN N/A GO:0005515 ... P38164 41680390
    985459 9h5k:G (3.2) BS03 ZN N/A GO:0005515 ... P38164 41680390
    985460 9h5k:G (3.2) BS04 ZN N/A GO:0005515 ... P38164 41680390
    985461 9h5k:I (3.2) BS01 ZN N/A GO:0000324 ... Q08281 41680390
    985462 9h5k:I (3.2) BS02 ZN N/A GO:0000324 ... Q08281 41680390
    985463 9h5k:I (3.2) BS03 ZN N/A GO:0000324 ... Q08281 41680390
    985464 9h5k:J (3.2) BS01 ZN N/A GO:0005515 ... P38164 41680390
    985465 9h5k:J (3.2) BS02 ZN N/A GO:0005515 ... P38164 41680390
    985466 9h5k:J (3.2) BS03 ZN N/A GO:0005515 ... P38164 41680390
    985467 9h5k:J (3.2) BS04 ZN N/A GO:0005515 ... P38164 41680390
    985468 9h5k:K (3.2) BS01 ZN N/A GO:0000329 ... Q03897 41680390
    985469 9h5k:K (3.2) BS02 ZN N/A GO:0000329 ... Q03897 41680390
    985470 9h5k:K (3.2) BS03 ZN N/A GO:0000329 ... Q03897 41680390
    985471 9h5k:O (3.2) BS01 ZN N/A GO:0005515 ... P38164 41680390
    985472 9h5k:O (3.2) BS02 ZN N/A GO:0005515 ... P38164 41680390
    985473 9h5k:O (3.2) BS03 ZN N/A GO:0005515 ... P38164 41680390
    985474 9h5k:O (3.2) BS04 ZN N/A GO:0005515 ... P38164 41680390
    985475 9h5k:a (3.2) BS01 MG N/A GO:0000329 ... Q00582 41680390
    985476 9h5k:a (3.2) BS02 AF3 N/A GO:0000329 ... Q00582 41680390
    985477 9h5k:a (3.2) BS03 GDP N/A GO:0000329 ... Q00582 41680390
    985478 9h5k:b (3.2) BS01 MG N/A GO:0000329 ... Q00582 41680390
    985479 9h5k:b (3.2) BS02 AF3 N/A GO:0000329 ... Q00582 41680390
    985480 9h5k:b (3.2) BS03 GDP N/A GO:0000329 ... Q00582 41680390
    985481 9h5k:c (3.2) BS01 GDP N/A GO:0000329 ... P53290 41680390
    985482 9h5k:d (3.2) BS01 GDP N/A GO:0000329 ... P53290 41680390
    985483 9h5n:B (3.1) BS01 A1ISR N/A GO:0004252 ... P00734 N/A
    985484 9h5n:D (3.1) BS01 A1ISR N/A GO:0004252 ... P00734 N/A
    985485 9h5o:B (1.9) BS01 A1IPM N/A GO:0005737 ... P40261 40209950
    985486 9h5o:B (1.9) BS02 SAH N/A GO:0005737 ... P40261 40209950
    985487 9h5o:D (1.9) BS01 A1IPM N/A GO:0005737 ... P40261 40209950
    985488 9h5o:D (1.9) BS02 SAH N/A GO:0005737 ... P40261 40209950
    985489 9h5p:A (2.3) BS01 FAD N/A GO:0016491 ... A0ACD6BAS7 39706511
    985490 9h5p:A (2.3) BS02 PUT N/A GO:0016491 ... A0ACD6BAS7 39706511
    985491 9h5p:B (2.3) BS01 FAD N/A GO:0016491 ... A0ACD6BAS7 39706511
    985492 9h5q:A (1.8) BS01 FAD N/A GO:0016491 ... A0ACD6BAS7 39706511
    985493 9h5q:A (1.8) BS02 13D N/A GO:0016491 ... A0ACD6BAS7 39706511
    985494 9h5q:B (1.8) BS01 FAD N/A GO:0016491 ... A0ACD6BAS7 39706511
    985495 9h5q:B (1.8) BS02 SPD N/A GO:0016491 ... A0ACD6BAS7 39706511
    985496 9h5q:B (1.8) BS03 MG N/A GO:0016491 ... A0ACD6BAS7 39706511
    985497 9h5r:B (2.84) BS01 ZN N/A GO:0004222 ... A2ES04 N/A
    985498 9h5s:A (2.98) BS01 ATP N/A GO:0001530 ... P10809 41256524
    985499 9h5s:B (2.98) BS01 ATP N/A GO:0001530 ... P10809 41256524
    985500 9h5s:C (2.98) BS01 ATP N/A GO:0001530 ... P10809 41256524
    985501 9h5s:D (2.98) BS01 ATP N/A GO:0001530 ... P10809 41256524
    985502 9h5s:E (2.98) BS01 ATP N/A GO:0001530 ... P10809 41256524
    985503 9h5s:F (2.98) BS01 ATP N/A GO:0001530 ... P10809 41256524
    985504 9h5s:G (2.98) BS01 ATP N/A GO:0001530 ... P10809 41256524
    985505 9h5s:H (2.98) BS01 ATP N/A GO:0001530 ... P10809 41256524
    985506 9h5s:I (2.98) BS01 ATP N/A GO:0001530 ... P10809 41256524
    985507 9h5s:J (2.98) BS01 ATP N/A GO:0001530 ... P10809 41256524
    985508 9h5s:K (2.98) BS01 ATP N/A GO:0001530 ... P10809 41256524
    985509 9h5s:L (2.98) BS01 ATP N/A GO:0001530 ... P10809 41256524
    985510 9h5s:M (2.98) BS01 ATP N/A GO:0001530 ... P10809 41256524
    985511 9h5s:N (2.98) BS01 ATP N/A GO:0001530 ... P10809 41256524
    985512 9h5t:A (3.44) BS01 ATP N/A GO:0001530 ... P10809 41256524
    985513 9h5t:B (3.44) BS01 ATP N/A GO:0001530 ... P10809 41256524
    985514 9h5t:C (3.44) BS01 ATP N/A GO:0001530 ... P10809 41256524
    985515 9h5t:D (3.44) BS01 ATP N/A GO:0001530 ... P10809 41256524
    985516 9h5t:E (3.44) BS01 ATP N/A GO:0001530 ... P10809 41256524
    985517 9h5t:F (3.44) BS01 ATP N/A GO:0001530 ... P10809 41256524
    985518 9h5t:G (3.44) BS01 ATP N/A GO:0001530 ... P10809 41256524
    985519 9h5u:A (3.14) BS01 ATP N/A GO:0001530 ... P10809 41256524
    985520 9h5u:B (3.14) BS01 ATP N/A GO:0001530 ... P10809 41256524
    985521 9h5u:C (3.14) BS01 ATP N/A GO:0001530 ... P10809 41256524
    985522 9h5u:D (3.14) BS01 ATP N/A GO:0001530 ... P10809 41256524
    985523 9h5u:E (3.14) BS01 ATP N/A GO:0001530 ... P10809 41256524
    985524 9h5u:F (3.14) BS01 ATP N/A GO:0001530 ... P10809 41256524
    985525 9h5u:G (3.14) BS01 ATP N/A GO:0001530 ... P10809 41256524
    985526 9h5u:H (3.14) BS01 ATP N/A GO:0001530 ... P10809 41256524
    985527 9h5u:I (3.14) BS01 ATP N/A GO:0001530 ... P10809 41256524
    985528 9h5u:J (3.14) BS01 ATP N/A GO:0001530 ... P10809 41256524
    985529 9h5u:K (3.14) BS01 ATP N/A GO:0001530 ... P10809 41256524
    985530 9h5u:L (3.14) BS01 ATP N/A GO:0001530 ... P10809 41256524
    985531 9h5u:M (3.14) BS01 ATP N/A GO:0001530 ... P10809 41256524
    985532 9h5u:N (3.14) BS01 ATP N/A GO:0001530 ... P10809 41256524
    985533 9h5w:B (2.0) BS01 ZN N/A GO:0004222 ... A2ES04 N/A
    985534 9h5x:A (1.7) BS01 AQI N/A GO:0001523 ... P02766 N/A
    985535 9h5x:B (1.7) BS01 AQI N/A GO:0001523 ... P02766 N/A
    985536 9h5y:A (1.67) BS01 AQI N/A GO:0001523 ... P02766 N/A
    985537 9h5y:B (1.67) BS01 AQI N/A GO:0001523 ... P02766 N/A
    985538 9h5z:A (2.2) BS01 FAD N/A GO:0016491 ... A0ACD6BAS7 39706511
    985539 9h5z:A (2.2) BS02 MG N/A GO:0016491 ... A0ACD6BAS7 39706511
    985540 9h5z:B (2.2) BS01 FAD N/A GO:0016491 ... A0ACD6BAS7 39706511
    985541 9h5z:B (2.2) BS02 ABN N/A GO:0016491 ... A0ACD6BAS7 39706511
    985542 9h61:A (3.21) BS01 IAC N/A GO:0003333 ... Q9CA25 40759769
    985543 9h62:A (3.43) BS01 CFA N/A GO:0003333 ... Q9CA25 40759769
    985544 9h63:A (2.88) BS01 A1ISN N/A GO:0003333 ... Q9CA25 40759769
    985545 9h64:A (1.6) BS01 FAD N/A GO:0016491 ... A0ACD6BAS7 39706511
    985546 9h64:A (1.6) BS02 A1ISO N/A GO:0016491 ... A0ACD6BAS7 39706511
    985547 9h64:B (1.6) BS01 FAD N/A GO:0016491 ... A0ACD6BAS7 39706511
    985548 9h64:B (1.6) BS02 A1ISO N/A GO:0016491 ... A0ACD6BAS7 39706511
    985549 9h65:A (3.1) BS01 peptide N/A GO:0003677 ... Q96RI1 40803552
    985550 9h65:A (3.1) BS02 RJC N/A GO:0003677 ... Q96RI1 40803552
    985551 9h65:B (3.1) BS01 RJC N/A GO:0003677 ... Q96RI1 40803552
    985552 9h66:A (2.6) BS01 peptide N/A GO:0003677 ... Q96RI1 40803552
    985553 9h66:A (2.6) BS02 peptide N/A GO:0003677 ... Q96RI1 40803552
    985554 9h66:A (2.6) BS03 R3U N/A GO:0003677 ... Q96RI1 40803552
    985555 9h66:B (2.6) BS01 peptide N/A GO:0003677 ... Q96RI1 40803552
    985556 9h66:B (2.6) BS02 R3U N/A GO:0003677 ... Q96RI1 40803552
    985557 9h66:C (2.6) BS01 peptide N/A GO:0003677 ... Q96RI1 40803552
    985558 9h66:C (2.6) BS02 peptide N/A GO:0003677 ... Q96RI1 40803552
    985559 9h66:C (2.6) BS03 R3U N/A GO:0003677 ... Q96RI1 40803552
    985560 9h66:D (2.6) BS01 peptide N/A GO:0003677 ... Q96RI1 40803552
    985561 9h66:D (2.6) BS02 R3U N/A GO:0003677 ... Q96RI1 40803552
    985562 9h6f:A (2.2) BS01 AHR N/A GO:0003824 ... A0A6N3VET1 N/A
    985563 9h6f:A (2.2) BS02 CA N/A GO:0003824 ... A0A6N3VET1 N/A
    985564 9h6f:B (2.2) BS01 AHR N/A GO:0003824 ... A0A6N3VET1 N/A
    985565 9h6f:B (2.2) BS02 CA N/A GO:0003824 ... A0A6N3VET1 N/A
    985566 9h6g:A (2.8) BS01 XYP N/A GO:0003824 ... A0A6N3VET1 N/A
    985567 9h6g:A (2.8) BS02 XYP N/A GO:0003824 ... A0A6N3VET1 N/A
    985568 9h6g:A (2.8) BS03 FUB N/A GO:0003824 ... A0A6N3VET1 N/A
    985569 9h6g:A (2.8) BS04 XYP N/A GO:0003824 ... A0A6N3VET1 N/A
    985570 9h6g:A (2.8) BS05 CA N/A GO:0003824 ... A0A6N3VET1 N/A
    985571 9h6g:B (2.8) BS01 FUB N/A GO:0003824 ... A0A6N3VET1 N/A
    985572 9h6g:B (2.8) BS02 XYP N/A GO:0003824 ... A0A6N3VET1 N/A
    985573 9h6g:B (2.8) BS03 XYP N/A GO:0003824 ... A0A6N3VET1 N/A
    985574 9h6g:B (2.8) BS04 CA N/A GO:0003824 ... A0A6N3VET1 N/A
    985575 9h6h:A (2.0) BS01 CA N/A GO:0003824 ... A0A6N3VET1 N/A
    985576 9h6h:B (2.0) BS01 CA N/A GO:0003824 ... A0A6N3VET1 N/A
    985577 9h6i:AA (2.2) BS01 rna N/A GO:0000325 ... Q9SIP7 41678627
    985578 9h6i:AB (2.2) BS01 rna N/A GO:0003729 ... Q9FLF0 41678627
    985579 9h6i:AC (2.2) BS01 rna N/A GO:0003729 ... Q93VB8 41678627
    985580 9h6i:AD (2.2) BS01 rna N/A GO:0000325 ... P51427 41678627
    985581 9h6i:AE (2.2) BS01 rna N/A GO:0000325 ... P42798 41678627
    985582 9h6i:AF (2.2) BS01 rna N/A GO:0000462 ... Q9SK22 41678627
    985583 9h6i:AG (2.2) BS01 rna N/A GO:0000325 ... P41127 41678627
    985584 9h6i:AG (2.2) BS02 rna N/A GO:0000325 ... P41127 41678627
    985585 9h6i:AH (2.2) BS01 rna N/A GO:0000325 ... Q9T043 41678627
    985586 9h6i:AI (2.2) BS01 rna N/A GO:0003723 ... Q9SW09 41678627
    985587 9h6i:AJ (2.2) BS01 rna N/A GO:0002181 ... Q940B0 41678627
    985588 9h6i:AK (2.2) BS01 rna N/A GO:0003723 ... Q9SRX2 41678627
    985589 9h6i:AK (2.2) BS02 rna N/A GO:0003723 ... Q9SRX2 41678627
    985590 9h6i:AL (2.2) BS01 rna N/A GO:0003735 ... A0A1P8AY36 41678627
    985591 9h6i:AL (2.2) BS02 rna N/A GO:0003735 ... A0A1P8AY36 41678627
    985592 9h6i:AM (2.2) BS01 rna N/A GO:0003674 ... Q43291 41678627
    985593 9h6i:AM (2.2) BS02 rna N/A GO:0003674 ... Q43291 41678627
    985594 9h6i:AN (2.2) BS01 rna N/A GO:0002181 ... Q9M9W1 41678627
    985595 9h6i:AO (2.2) BS01 rna N/A GO:0002181 ... Q42347 41678627
    985596 9h6i:AP (2.2) BS01 rna N/A GO:0003729 ... P51419 41678627
    985597 9h6i:AQ (2.2) BS01 rna N/A GO:0003729 ... O82204 41678627
    985598 9h6i:AR (2.2) BS01 rna N/A N/A F4JC32 41678627
    985599 9h6i:AT (2.2) BS01 rna N/A GO:0003723 ... Q8VZ19 41678627
    985600 9h6i:AU (2.2) BS01 rna N/A GO:0002181 ... Q9STR1 41678627

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).