SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    985801 9h74:G (2.9) BS01 rna N/A GO:0003723 ... G1TK17 41272315
    985802 9h74:H (2.9) BS01 rna N/A GO:0003735 ... G1TFM5 41272315
    985803 9h74:I (2.9) BS01 rna N/A GO:0003735 ... G1TM55 41272315
    985804 9h74:J (2.9) BS01 rna N/A GO:0003735 ... G1SVB0 41272315
    985805 9h74:K (2.9) BS01 rna N/A GO:0003735 ... G1TJW1 41272315
    985806 9h74:L (2.9) BS01 rna N/A GO:0003735 ... B7NZS8 41272315
    985807 9h74:M (2.9) BS01 rna N/A GO:0003723 ... G1U0Y5 41272315
    985808 9h74:N (2.9) BS01 rna N/A GO:0003735 ... G1TRM4 41272315
    985809 9h74:O (2.9) BS01 rna N/A GO:0003735 ... G1SFR8 41272315
    985810 9h74:P (2.9) BS01 rna N/A GO:0003735 ... G1SP51 41272315
    985811 9h74:Q (2.9) BS01 rna N/A GO:0003735 ... G1T1F0 41272315
    985812 9h74:R (2.9) BS01 rna N/A GO:0000028 ... G1U0Q2 41272315
    985813 9h74:R (2.9) BS02 rna N/A GO:0000028 ... G1U0Q2 41272315
    985814 9h74:S (2.9) BS01 rna N/A GO:0000462 ... G1SGX4 41272315
    985815 9h74:T (2.9) BS01 rna N/A GO:0003735 ... G1TU13 41272315
    985816 9h74:U (2.9) BS01 rna N/A GO:0003735 ... G1TPG3 41272315
    985817 9h74:U (2.9) BS02 rna N/A GO:0003735 ... G1TPG3 41272315
    985818 9h74:V (2.9) BS01 rna N/A GO:0000028 ... G1TN62 41272315
    985819 9h74:W (2.9) BS01 rna N/A GO:0003735 ... G1SIZ2 41272315
    985820 9h74:Y (2.9) BS01 rna N/A GO:0003735 ... G1TG89 41272315
    985821 9h74:Z (2.9) BS01 rna N/A GO:0003735 ... G1SZ47 41272315
    985822 9h74:a (2.9) BS01 rna N/A GO:0003735 ... G1TS40 41272315
    985823 9h74:b (2.9) BS01 rna N/A GO:0003729 ... G1TFE8 41272315
    985824 9h74:c (2.9) BS01 rna N/A GO:0003735 ... G1TZ76 41272315
    985825 9h74:d (2.9) BS01 rna N/A GO:0000028 ... G1TIB4 41272315
    985826 9h74:e (2.9) BS01 rna N/A GO:0002181 ... G1U7M4 41272315
    985827 9h74:f (2.9) BS01 rna N/A GO:0003735 ... G1SK22 41272315
    985828 9h74:g (2.9) BS01 rna N/A GO:0001891 ... G1SJB4 41272315
    985829 9h74:i (2.9) BS01 rna N/A GO:0005634 ... G1T8A2 41272315
    985830 9h74:j (2.9) BS01 rna N/A GO:0003723 ... P47813 41272315
    985831 9h74:j (2.9) BS02 rna N/A GO:0003723 ... P47813 41272315
    985832 9h74:k (2.9) BS01 rna N/A GO:0005737 ... A0A5K1V8K4 41272315
    985833 9h74:k (2.9) BS02 SF4 N/A GO:0005737 ... A0A5K1V8K4 41272315
    985834 9h74:k (2.9) BS03 SF4 N/A GO:0005737 ... A0A5K1V8K4 41272315
    985835 9h74:n (2.9) BS01 rna N/A GO:0003735 ... G1TDB3 41272315
    985836 9h74:o (2.9) BS01 rna N/A GO:0001732 ... G1TGW1 41272315
    985837 9h74:o (2.9) BS02 rna N/A GO:0001732 ... G1TGW1 41272315
    985838 9h75:A (-1.00) BS01 ZN N/A N/A Q92974 41365297
    985839 9h75:A (-1.00) BS02 ZN N/A N/A Q92974 41365297
    985840 9h76:A (2.9) BS01 ALA N/A GO:0003333 ... A0ACD6B9K4 39822574
    985841 9h78:A (2.7) BS01 SF4 N/A GO:0005524 ... Q60350 40560930
    985842 9h79:B (3.0) BS01 A1ITQ N/A GO:0004252 ... P00734 N/A
    985843 9h79:D (3.0) BS01 A1ITQ N/A GO:0004252 ... P00734 N/A
    985844 9h79:F (3.0) BS01 A1ITQ N/A GO:0004252 ... P00734 N/A
    985845 9h79:H (3.0) BS01 A1ITQ N/A GO:0004252 ... P00734 N/A
    985846 9h7b:A (1.51) BS01 CA N/A GO:0001523 ... P02766 40367241
    985847 9h7b:A (1.51) BS02 Z7Z N/A GO:0001523 ... P02766 40367241
    985848 9h7b:B (1.51) BS01 Z7Z N/A GO:0001523 ... P02766 40367241
    985849 9h7c:A (1.27) BS01 CA N/A GO:0001523 ... P02766 40367241
    985850 9h7c:A (1.27) BS02 MSR N/A GO:0001523 ... P02766 40367241
    985851 9h7c:B (1.27) BS01 MSR N/A GO:0001523 ... P02766 40367241
    985852 9h7d:A (1.23) BS01 CA N/A GO:0001523 ... P02766 40367241
    985853 9h7d:A (1.23) BS02 EHO N/A GO:0001523 ... P02766 40367241
    985854 9h7d:B (1.23) BS01 EHO N/A GO:0001523 ... P02766 40367241
    985855 9h7e:A (1.43) BS01 CA N/A GO:0001523 ... P02766 40367241
    985856 9h7e:A (1.43) BS02 PQM N/A GO:0001523 ... P02766 40367241
    985857 9h7e:B (1.43) BS01 PQM N/A GO:0001523 ... P02766 40367241
    985858 9h7f:B (1.24) BS01 A1ISU N/A GO:0001523 ... P02766 40367241
    985859 9h7g:A (1.49) BS01 CA N/A GO:0001523 ... P02766 40367241
    985860 9h7g:A (1.49) BS02 98Z N/A GO:0001523 ... P02766 40367241
    985861 9h7g:B (1.49) BS01 98Z N/A GO:0001523 ... P02766 40367241
    985862 9h7h:A (1.47) BS01 CA N/A GO:0001523 ... P02766 40367241
    985863 9h7h:B (1.47) BS01 WLX N/A GO:0001523 ... P02766 40367241
    985864 9h7i:A (1.21) BS01 CA N/A GO:0001523 ... P02766 40367241
    985865 9h7i:A (1.21) BS02 A1ISS N/A GO:0001523 ... P02766 40367241
    985866 9h7i:B (1.21) BS01 A1ISS N/A GO:0001523 ... P02766 40367241
    985867 9h7j:A (1.3) BS01 A1ISY N/A GO:0001523 ... P02766 40367241
    985868 9h7j:B (1.3) BS01 A1ISY N/A GO:0001523 ... P02766 40367241
    985869 9h7j:B (1.3) BS02 CA N/A GO:0001523 ... P02766 40367241
    985870 9h7k:A (1.6) BS01 CA N/A GO:0001523 ... P02766 40367241
    985871 9h7k:A (1.6) BS02 A1IS2 N/A GO:0001523 ... P02766 40367241
    985872 9h7k:B (1.6) BS01 A1IS2 N/A GO:0001523 ... P02766 40367241
    985873 9h7l:A (1.18) BS01 CA N/A GO:0001523 ... P02766 40367241
    985874 9h7l:A (1.18) BS02 A1IS0 N/A GO:0001523 ... P02766 40367241
    985875 9h7l:B (1.18) BS01 A1IS0 N/A GO:0001523 ... P02766 40367241
    985876 9h7m:A (1.27) BS01 CA N/A GO:0001523 ... P02766 40367241
    985877 9h7m:A (1.27) BS02 A1ISV N/A GO:0001523 ... P02766 40367241
    985878 9h7m:B (1.27) BS01 A1ISV N/A GO:0001523 ... P02766 40367241
    985879 9h7m:B (1.27) BS02 CA N/A GO:0001523 ... P02766 40367241
    985880 9h7n:A (1.26) BS01 CA N/A GO:0001523 ... P02766 40367241
    985881 9h7n:A (1.26) BS02 A1IST N/A GO:0001523 ... P02766 40367241
    985882 9h7n:B (1.26) BS01 A1IST N/A GO:0001523 ... P02766 40367241
    985883 9h7o:A (1.24) BS01 CA N/A GO:0001523 ... P02766 40367241
    985884 9h7o:A (1.24) BS02 A1ISZ N/A GO:0001523 ... P02766 40367241
    985885 9h7o:B (1.24) BS01 A1ISZ N/A GO:0001523 ... P02766 40367241
    985886 9h7p:A (1.36) BS01 CA N/A GO:0001523 ... P02766 40367241
    985887 9h7p:A (1.36) BS02 A1ISS N/A GO:0001523 ... P02766 40367241
    985888 9h7p:B (1.36) BS01 A1ISS N/A GO:0001523 ... P02766 40367241
    985889 9h7q:A (1.72) BS01 A1IS6 N/A GO:0046983 ... O75030 N/A
    985890 9h7q:B (1.72) BS01 A1IS6 N/A GO:0046983 ... O75030 N/A
    985891 9h7r:A (2.52) BS01 A1IS5 N/A GO:0046983 ... O75030 N/A
    985892 9h7r:B (2.52) BS01 A1IS5 N/A GO:0046983 ... O75030 N/A
    985893 9h7s:A (1.99) BS01 A1IS4 N/A GO:0046983 ... O75030 N/A
    985894 9h7s:B (1.99) BS01 A1IS4 N/A GO:0046983 ... O75030 N/A
    985895 9h7t:A (1.85) BS01 A1IS7 N/A GO:0046983 ... O75030 N/A
    985896 9h7t:B (1.85) BS01 A1IS7 N/A GO:0046983 ... O75030 N/A
    985897 9h7v:BA (2.6) BS01 peptide N/A N/A A0A410N6X8 41042861
    985898 9h7v:BB (2.6) BS01 peptide N/A N/A A0A410N6X8 41042861
    985899 9h7v:BC (2.6) BS01 peptide N/A N/A A0A410N6X8 41042861
    985900 9h7v:BD (2.6) BS01 peptide N/A GO:0046872 ... A0A410N6T6 41042861
    985901 9h7v:BD (2.6) BS02 peptide N/A GO:0046872 ... A0A410N6T6 41042861
    985902 9h7v:BD (2.6) BS03 MG N/A GO:0046872 ... A0A410N6T6 41042861
    985903 9h7v:BD (2.6) BS04 MG N/A GO:0046872 ... A0A410N6T6 41042861
    985904 9h7v:BD (2.6) BS05 MG N/A GO:0046872 ... A0A410N6T6 41042861
    985905 9h7v:BD (2.6) BS06 MG N/A GO:0046872 ... A0A410N6T6 41042861
    985906 9h7v:BD (2.6) BS07 MG N/A GO:0046872 ... A0A410N6T6 41042861
    985907 9h7v:BD (2.6) BS08 MG N/A GO:0046872 ... A0A410N6T6 41042861
    985908 9h7v:BD (2.6) BS09 MG N/A GO:0046872 ... A0A410N6T6 41042861
    985909 9h7v:BE (2.6) BS01 peptide N/A GO:0046872 ... A0A410N6T6 41042861
    985910 9h7v:BE (2.6) BS02 peptide N/A GO:0046872 ... A0A410N6T6 41042861
    985911 9h7v:BE (2.6) BS03 peptide N/A GO:0046872 ... A0A410N6T6 41042861
    985912 9h7v:BE (2.6) BS04 MG N/A GO:0046872 ... A0A410N6T6 41042861
    985913 9h7v:BE (2.6) BS05 MG N/A GO:0046872 ... A0A410N6T6 41042861
    985914 9h7v:BE (2.6) BS06 MG N/A GO:0046872 ... A0A410N6T6 41042861
    985915 9h7v:BE (2.6) BS07 MG N/A GO:0046872 ... A0A410N6T6 41042861
    985916 9h7v:BE (2.6) BS08 MG N/A GO:0046872 ... A0A410N6T6 41042861
    985917 9h7v:BE (2.6) BS09 MG N/A GO:0046872 ... A0A410N6T6 41042861
    985918 9h7v:BE (2.6) BS10 MG N/A GO:0046872 ... A0A410N6T6 41042861
    985919 9h7v:BF (2.6) BS01 peptide N/A GO:0046872 ... A0A410N6T6 41042861
    985920 9h7v:BF (2.6) BS02 peptide N/A GO:0046872 ... A0A410N6T6 41042861
    985921 9h7v:BF (2.6) BS03 peptide N/A GO:0046872 ... A0A410N6T6 41042861
    985922 9h7v:BF (2.6) BS04 MG N/A GO:0046872 ... A0A410N6T6 41042861
    985923 9h7v:BF (2.6) BS05 MG N/A GO:0046872 ... A0A410N6T6 41042861
    985924 9h7v:BF (2.6) BS06 MG N/A GO:0046872 ... A0A410N6T6 41042861
    985925 9h7v:BF (2.6) BS07 MG N/A GO:0046872 ... A0A410N6T6 41042861
    985926 9h7v:BG (2.6) BS01 MG N/A N/A A0A410N721 41042861
    985927 9h7v:BG (2.6) BS02 MG N/A N/A A0A410N721 41042861
    985928 9h7v:BH (2.6) BS01 MG N/A N/A A0A410N721 41042861
    985929 9h7v:BH (2.6) BS02 MG N/A N/A A0A410N721 41042861
    985930 9h7v:BH (2.6) BS03 MG N/A N/A A0A410N721 41042861
    985931 9h7v:BH (2.6) BS04 ZN N/A N/A A0A410N721 41042861
    985932 9h7v:BI (2.6) BS01 ZN N/A N/A A0A410N721 41042861
    985933 9h7v:BI (2.6) BS02 MG N/A N/A A0A410N721 41042861
    985934 9h7v:BI (2.6) BS03 MG N/A N/A A0A410N721 41042861
    985935 9h7v:BI (2.6) BS04 MG N/A N/A A0A410N721 41042861
    985936 9h7v:BJ (2.6) BS01 MG N/A N/A A0A410N721 41042861
    985937 9h7v:BJ (2.6) BS02 MG N/A N/A A0A410N721 41042861
    985938 9h7v:BJ (2.6) BS03 ZN N/A N/A A0A410N721 41042861
    985939 9h7v:BK (2.6) BS01 MG N/A N/A A0A410N721 41042861
    985940 9h7v:BK (2.6) BS02 MG N/A N/A A0A410N721 41042861
    985941 9h7v:BK (2.6) BS03 MG N/A N/A A0A410N721 41042861
    985942 9h7v:BK (2.6) BS04 ZN N/A N/A A0A410N721 41042861
    985943 9h7v:BL (2.6) BS01 MG N/A N/A A0A410N721 41042861
    985944 9h7v:BL (2.6) BS02 MG N/A N/A A0A410N721 41042861
    985945 9h7v:BL (2.6) BS03 MG N/A N/A A0A410N721 41042861
    985946 9h7v:BM (2.6) BS01 MG N/A N/A A0A410N721 41042861
    985947 9h7v:BM (2.6) BS02 MG N/A N/A A0A410N721 41042861
    985948 9h7v:BM (2.6) BS03 MG N/A N/A A0A410N721 41042861
    985949 9h7v:BN (2.6) BS01 MG N/A N/A A0A410N721 41042861
    985950 9h7v:BN (2.6) BS02 MG N/A N/A A0A410N721 41042861
    985951 9h7v:BN (2.6) BS03 MG N/A N/A A0A410N721 41042861
    985952 9h7v:BN (2.6) BS04 ZN N/A N/A A0A410N721 41042861
    985953 9h7v:BO (2.6) BS01 MG N/A N/A A0A410N721 41042861
    985954 9h7v:BO (2.6) BS02 MG N/A N/A A0A410N721 41042861
    985955 9h7v:BO (2.6) BS03 MG N/A N/A A0A410N721 41042861
    985956 9h7w:A (1.13) BS01 A1ISW N/A GO:0003796 ... P00698 N/A
    985957 9h7w:A (1.13) BS02 A1ISW N/A GO:0003796 ... P00698 N/A
    985958 9h7x:A (2.525) BS01 AN2 N/A GO:0005524 ... Q60350 40560930
    985959 9h7x:A (2.525) BS02 ZN N/A GO:0005524 ... Q60350 40560930
    985960 9h7x:A (2.525) BS03 AN2 N/A GO:0005524 ... Q60350 40560930
    985961 9h7x:C (2.525) BS01 AN2 N/A GO:0005524 ... Q60350 40560930
    985962 9h7x:C (2.525) BS02 AN2 N/A GO:0005524 ... Q60350 40560930
    985963 9h7y:A (3.198) BS01 MG N/A GO:0005524 ... Q60350 40560930
    985964 9h7y:A (3.198) BS02 ANP N/A GO:0005524 ... Q60350 40560930
    985965 9h7z:A (1.71) BS01 BMA N/A GO:0016614 ... P13006 N/A
    985966 9h7z:A (1.71) BS02 FAD N/A GO:0016614 ... P13006 N/A
    985967 9h7z:M (1.71) BS01 MAN N/A GO:0016614 ... P13006 N/A
    985968 9h7z:M (1.71) BS02 FAD N/A GO:0016614 ... P13006 N/A
    985969 9h81:AAA (2.35) BS01 ZN N/A GO:0004064 ... P00915 40104783
    985970 9h81:AAA (2.35) BS02 A1IS9 N/A GO:0004064 ... P00915 40104783
    985971 9h81:BBB (2.35) BS01 ZN N/A GO:0004064 ... P00915 40104783
    985972 9h81:BBB (2.35) BS02 A1IS9 N/A GO:0004064 ... P00915 40104783
    985973 9h8b:A0 (2.3) BS01 CA N/A N/A N/A 39803462
    985974 9h8b:A0 (2.3) BS02 CA N/A N/A N/A 39803462
    985975 9h8b:A0 (2.3) BS03 CA N/A N/A N/A 39803462
    985976 9h8b:A1 (2.3) BS01 CA N/A N/A N/A 39803462
    985977 9h8b:A1 (2.3) BS02 CA N/A N/A N/A 39803462
    985978 9h8b:A1 (2.3) BS03 CA N/A N/A N/A 39803462
    985979 9h8b:A2 (2.3) BS01 CA N/A N/A N/A 39803462
    985980 9h8b:A2 (2.3) BS02 CA N/A N/A N/A 39803462
    985981 9h8b:A2 (2.3) BS03 CA N/A N/A N/A 39803462
    985982 9h8b:A3 (2.3) BS01 CA N/A N/A N/A 39803462
    985983 9h8b:A3 (2.3) BS02 CA N/A N/A N/A 39803462
    985984 9h8b:A3 (2.3) BS03 CA N/A N/A N/A 39803462
    985985 9h8b:A4 (2.3) BS01 CA N/A N/A N/A 39803462
    985986 9h8b:A4 (2.3) BS02 CA N/A N/A N/A 39803462
    985987 9h8b:A4 (2.3) BS03 CA N/A N/A N/A 39803462
    985988 9h8b:A5 (2.3) BS01 CA N/A N/A N/A 39803462
    985989 9h8b:A5 (2.3) BS02 CA N/A N/A N/A 39803462
    985990 9h8b:A5 (2.3) BS03 CA N/A N/A N/A 39803462
    985991 9h8b:A6 (2.3) BS01 CA N/A N/A N/A 39803462
    985992 9h8b:A6 (2.3) BS02 CA N/A N/A N/A 39803462
    985993 9h8b:A6 (2.3) BS03 CA N/A N/A N/A 39803462
    985994 9h8b:A7 (2.3) BS01 CA N/A N/A N/A 39803462
    985995 9h8b:A7 (2.3) BS02 CA N/A N/A N/A 39803462
    985996 9h8b:A7 (2.3) BS03 CA N/A N/A N/A 39803462
    985997 9h8b:A8 (2.3) BS01 CA N/A N/A N/A 39803462
    985998 9h8b:A8 (2.3) BS02 CA N/A N/A N/A 39803462
    985999 9h8b:A8 (2.3) BS03 CA N/A N/A N/A 39803462
    986000 9h8b:A9 (2.3) BS01 CA N/A N/A N/A 39803462

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).