SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 4923 4924 4925 4926 4927 4928 4929 4930 4931 4932 4933 4934 4935 4936 4937 4938 4939 4940 4941 4942 4943 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    986401 9h8b:Fo (2.3) BS03 CA N/A N/A N/A 39803462
    986402 9h8b:Fq (2.3) BS01 CA N/A N/A N/A 39803462
    986403 9h8b:Fq (2.3) BS02 CA N/A N/A N/A 39803462
    986404 9h8b:Fq (2.3) BS03 CA N/A N/A N/A 39803462
    986405 9h8c:A (2.573) BS01 A1IS8 N/A GO:0004672 ... P49336 39780505
    986406 9h8d:A (1.641) BS01 A1ITC N/A GO:0004672 ... Q92918 39928839
    986407 9h8e:A (1.631) BS01 A1ITA N/A GO:0004672 ... Q92918 39928839
    986408 9h8f:A (1.393) BS01 A1ITB N/A GO:0004672 ... Q92918 39928839
    986409 9h8g:D (2.09) BS01 rna N/A GO:0000028 ... P0A7V8 39386670
    986410 9h8g:E (2.09) BS01 rna N/A GO:0000028 ... P0A7W1 39386670
    986411 9h8g:F (2.09) BS01 rna N/A GO:0002181 ... P02358 39386670
    986412 9h8g:H (2.09) BS01 rna N/A GO:0000028 ... P0A7W7 39386670
    986413 9h8g:K (2.09) BS01 rna N/A GO:0002181 ... P0A7R9 39386670
    986414 9h8g:K (2.09) BS02 A1IC4 N/A GO:0002181 ... P0A7R9 39386670
    986415 9h8g:L (2.09) BS01 rna N/A GO:0000049 ... P0A7S3 39386670
    986416 9h8g:O (2.09) BS01 rna N/A GO:0000028 ... P0ADZ4 39386670
    986417 9h8g:P (2.09) BS01 rna N/A GO:0000028 ... P0A7T3 39386670
    986418 9h8g:Q (2.09) BS01 rna N/A GO:0000028 ... P0AG63 39386670
    986419 9h8g:R (2.09) BS01 rna N/A GO:0002181 ... P0A7T7 39386670
    986420 9h8g:T (2.09) BS01 rna N/A GO:0000028 ... P0A7U7 39386670
    986421 9h8g:U (2.09) BS01 rna N/A GO:0000028 ... P68679 39386670
    986422 9h8j:A (2.2) BS01 PO4 N/A GO:0008976 ... A0A1E4R1F9 39846220
    986423 9h8j:A (2.2) BS02 PO4 N/A GO:0008976 ... A0A1E4R1F9 39846220
    986424 9h8j:B (2.2) BS01 PO4 N/A GO:0008976 ... A0A1E4R1F9 39846220
    986425 9h8j:B (2.2) BS02 PO4 N/A GO:0008976 ... A0A1E4R1F9 39846220
    986426 9h8j:C (2.2) BS01 PO4 N/A GO:0008976 ... A0A1E4R1F9 39846220
    986427 9h8j:C (2.2) BS02 PO4 N/A GO:0008976 ... A0A1E4R1F9 39846220
    986428 9h8j:D (2.2) BS01 PO4 N/A GO:0008976 ... A0A1E4R1F9 39846220
    986429 9h8j:D (2.2) BS02 PO4 N/A GO:0008976 ... A0A1E4R1F9 39846220
    986430 9h8k:A (2.1) BS01 AMP N/A GO:0008976 ... A0A1E4R1F9 39846220
    986431 9h8k:A (2.1) BS02 AMP N/A GO:0008976 ... A0A1E4R1F9 39846220
    986432 9h8k:A (2.1) BS03 AMP N/A GO:0008976 ... A0A1E4R1F9 39846220
    986433 9h8k:A (2.1) BS04 PO4 N/A GO:0008976 ... A0A1E4R1F9 39846220
    986434 9h8k:A (2.1) BS05 PO4 N/A GO:0008976 ... A0A1E4R1F9 39846220
    986435 9h8k:A (2.1) BS06 PO4 N/A GO:0008976 ... A0A1E4R1F9 39846220
    986436 9h8l:A (2.1) BS01 TMP N/A GO:0008976 ... A0A1E4R1F9 39846220
    986437 9h8l:A (2.1) BS02 PO4 N/A GO:0008976 ... A0A1E4R1F9 39846220
    986438 9h8l:A (2.1) BS03 PO4 N/A GO:0008976 ... A0A1E4R1F9 39846220
    986439 9h8m:A (1.38) BS01 FAD N/A GO:0016020 ... B6HN76 40052414
    986440 9h8p:A (1.47) BS01 FAD N/A GO:0003824 ... Q0SBK1 N/A
    986441 9h8p:B (1.47) BS01 FAD N/A GO:0003824 ... Q0SBK1 N/A
    986442 9h8p:C (1.47) BS01 FAD N/A GO:0003824 ... Q0SBK1 N/A
    986443 9h8p:D (1.47) BS01 FAD N/A GO:0003824 ... Q0SBK1 N/A
    986444 9h8p:E (1.47) BS01 FAD N/A GO:0003824 ... Q0SBK1 N/A
    986445 9h8p:F (1.47) BS01 FAD N/A GO:0003824 ... Q0SBK1 N/A
    986446 9h8p:G (1.47) BS01 FAD N/A GO:0003824 ... Q0SBK1 N/A
    986447 9h8p:H (1.47) BS01 FAD N/A GO:0003824 ... Q0SBK1 N/A
    986448 9h8q:A (1.6) BS01 FAD N/A GO:0003824 ... Q0SBK1 N/A
    986449 9h8q:B (1.6) BS01 FAD N/A GO:0003824 ... Q0SBK1 N/A
    986450 9h8q:C (1.6) BS01 FAD N/A GO:0003824 ... Q0SBK1 N/A
    986451 9h8q:D (1.6) BS01 FAD N/A GO:0003824 ... Q0SBK1 N/A
    986452 9h8q:E (1.6) BS01 FAD N/A GO:0003824 ... Q0SBK1 N/A
    986453 9h8q:F (1.6) BS01 FAD N/A GO:0003824 ... Q0SBK1 N/A
    986454 9h8q:G (1.6) BS01 FAD N/A GO:0003824 ... Q0SBK1 N/A
    986455 9h8q:H (1.6) BS01 FAD N/A GO:0003824 ... Q0SBK1 N/A
    986456 9h8r:A (1.75) BS01 peptide N/A N/A O76036 N/A
    986457 9h8r:A (1.75) BS02 DHL N/A N/A O76036 N/A
    986458 9h8s:A (2.157) BS01 A1ITF N/A GO:0004672 ... P49336 39780505
    986459 9h8t:A (2.67) BS01 FES N/A GO:0005739 ... A0A0D9QXW2 40389671
    986460 9h8t:D (2.67) BS01 HEC N/A GO:0005739 ... A0A0D9R8S7 40389671
    986461 9h8t:D (2.67) BS02 ZN N/A GO:0005739 ... A0A0D9R8S7 40389671
    986462 9h8t:J (2.67) BS01 AOQ N/A GO:0005739 ... Q1AL63 40389671
    986463 9h8t:J (2.67) BS02 AFI N/A GO:0005739 ... Q1AL63 40389671
    986464 9h8t:J (2.67) BS03 HEM N/A GO:0005739 ... Q1AL63 40389671
    986465 9h8t:J (2.67) BS04 HEM N/A GO:0005739 ... Q1AL63 40389671
    986466 9h8t:a (2.67) BS01 FES N/A GO:0005739 ... A0A0D9QXW2 40389671
    986467 9h8t:d (2.67) BS01 HEC N/A GO:0005739 ... A0A0D9R8S7 40389671
    986468 9h8t:j (2.67) BS01 AOQ N/A GO:0005739 ... Q1AL63 40389671
    986469 9h8t:j (2.67) BS02 AFI N/A GO:0005739 ... Q1AL63 40389671
    986470 9h8t:j (2.67) BS03 HEM N/A GO:0005739 ... Q1AL63 40389671
    986471 9h8t:j (2.67) BS04 HEM N/A GO:0005739 ... Q1AL63 40389671
    986472 9h8u:A (3.0) BS01 FAD N/A GO:0016491 ... B6HNK6 40052414
    986473 9h8u:A (3.0) BS02 A1ITD N/A GO:0016491 ... B6HNK6 40052414
    986474 9h8u:B (3.0) BS01 FAD N/A GO:0016491 ... B6HNK6 40052414
    986475 9h8u:B (3.0) BS02 A1ITD N/A GO:0016491 ... B6HNK6 40052414
    986476 9h8z:A (1.71) BS01 FAD N/A GO:0016020 ... B6HN76 40052414
    986477 9h8z:A (1.71) BS02 A1ITD N/A GO:0016020 ... B6HN76 40052414
    986478 9h90:C (2.8) BS01 rna N/A GO:0003676 ... A0AAN0Y138 40331629
    986479 9h90:D (2.8) BS01 rna N/A GO:0003735 ... A0AAN0Y0L1 40331629
    986480 9h90:G (2.8) BS01 rna N/A GO:0000049 ... A0AAN0Y3T9 40331629
    986481 9h90:I (2.8) BS01 rna N/A GO:0003723 ... A0AAN0Y103 40331629
    986482 9h90:J (2.8) BS01 rna N/A GO:0000049 ... A0AAN0Y0R4 40331629
    986483 9h90:d (2.8) BS01 rna N/A GO:0003723 ... A0AAN0XZY8 40331629
    986484 9h90:e (2.8) BS01 rna N/A GO:0003723 ... A0AAN1CUS4 40331629
    986485 9h90:f (2.8) BS01 rna N/A GO:0003735 ... A0AAN0Y4F0 40331629
    986486 9h90:h (2.8) BS01 rna N/A GO:0003735 ... A0AAN0Y0S4 40331629
    986487 9h90:k (2.8) BS01 rna N/A GO:0003735 ... A0AAN0Y004 40331629
    986488 9h90:l (2.8) BS01 rna N/A GO:0000049 ... A0AAN0Y4G9 40331629
    986489 9h90:o (2.8) BS01 rna N/A GO:0003735 ... A0AAN0Y3D6 40331629
    986490 9h90:p (2.8) BS01 rna N/A GO:0003735 ... A0AAN0Y460 40331629
    986491 9h90:q (2.8) BS01 rna N/A GO:0003735 ... A0AAN0XZY2 40331629
    986492 9h90:r (2.8) BS01 rna N/A GO:0003735 ... A0AAN0Y440 40331629
    986493 9h90:t (2.8) BS01 rna N/A GO:0003723 ... A0AAN1CUQ1 40331629
    986494 9h90:u (2.8) BS01 rna N/A GO:0003735 ... A0AAN1CUP2 40331629
    986495 9h91:0 (2.7) BS01 rna N/A GO:0003735 ... A0AAN0Y2T2 40331629
    986496 9h91:1 (2.7) BS01 rna N/A GO:0003735 ... A0AAN0XZW0 40331629
    986497 9h91:2 (2.7) BS01 rna N/A GO:0003735 ... A0AAN0Y4Q5 40331629
    986498 9h91:3 (2.7) BS01 rna N/A GO:0003735 ... A0AAN0Y2A7 40331629
    986499 9h91:4 (2.7) BS01 rna N/A GO:0003735 ... A0AAN0Y149 40331629
    986500 9h91:4 (2.7) BS02 ZN N/A GO:0003735 ... A0AAN0Y149 40331629
    986501 9h91:C (2.7) BS01 rna N/A GO:0002181 ... A0AAN1CUJ7 40331629
    986502 9h91:D (2.7) BS01 rna N/A GO:0003735 ... A0AAN1CUL8 40331629
    986503 9h91:E (2.7) BS01 rna N/A GO:0003735 ... A0AAN1CVG6 40331629
    986504 9h91:G (2.7) BS01 rna N/A GO:0002181 ... A0AAN1CUM2 40331629
    986505 9h91:H (2.7) BS01 rna N/A GO:0003735 ... A0AAN0Y4G6 40331629
    986506 9h91:J (2.7) BS01 rna N/A GO:0003729 ... A0AAN0Y0U3 40331629
    986507 9h91:K (2.7) BS01 rna N/A GO:0003735 ... A0AAN0Y0F6 40331629
    986508 9h91:L (2.7) BS01 rna N/A GO:0003735 ... A0AAN1CUX1 40331629
    986509 9h91:M (2.7) BS01 rna N/A GO:0003735 ... A0AAN0Y0C5 40331629
    986510 9h91:M (2.7) BS02 rna N/A GO:0003735 ... A0AAN0Y0C5 40331629
    986511 9h91:N (2.7) BS01 rna N/A GO:0003735 ... A0AAN0Y071 40331629
    986512 9h91:O (2.7) BS01 rna N/A GO:0003735 ... A0AAN1CVH0 40331629
    986513 9h91:O (2.7) BS02 rna N/A GO:0003735 ... A0AAN1CVH0 40331629
    986514 9h91:P (2.7) BS01 rna N/A GO:0003735 ... A0AAN1CWW0 40331629
    986515 9h91:Q (2.7) BS01 rna N/A GO:0000027 ... A0AAN1CVB0 40331629
    986516 9h91:R (2.7) BS01 rna N/A GO:0003723 ... A0AAN1CVI2 40331629
    986517 9h91:S (2.7) BS01 rna N/A GO:0003735 ... A0AAN0Y0L0 40331629
    986518 9h91:T (2.7) BS01 rna N/A GO:0003735 ... A0AAN1CUR9 40331629
    986519 9h91:U (2.7) BS01 rna N/A GO:0003723 ... A0AAN0Y061 40331629
    986520 9h91:V (2.7) BS01 rna N/A GO:0003723 ... A0AAN0Y4S6 40331629
    986521 9h91:V (2.7) BS02 rna N/A GO:0003723 ... A0AAN0Y4S6 40331629
    986522 9h91:W (2.7) BS01 rna N/A GO:0003735 ... A0AAN1CUT7 40331629
    986523 9h91:W (2.7) BS02 rna N/A GO:0003735 ... A0AAN1CUT7 40331629
    986524 9h91:X (2.7) BS01 rna N/A GO:0003735 ... A0AAN0Y076 40331629
    986525 9h91:Y (2.7) BS01 rna N/A GO:0003735 ... A0AAN0XZZ8 40331629
    986526 9h91:Z (2.7) BS01 rna N/A GO:0003735 ... A0AAN1CUK2 40331629
    986527 9h91:Z (2.7) BS02 rna N/A GO:0003735 ... A0AAN1CUK2 40331629
    986528 9h92:A (1.55) BS01 FAD N/A GO:0016491 ... B6HNK6 40052414
    986529 9h96:A (1.04) BS01 A1ITG N/A GO:0000785 ... P19784 40116007
    986530 9h97:A (1.7) BS01 A1ITG N/A GO:0004672 ... P68400 40116007
    986531 9h99:A (1.8) BS01 ZN N/A GO:0001907 ... Q6YNB8 41734756
    986532 9h99:A (1.8) BS02 CA N/A GO:0001907 ... Q6YNB8 41734756
    986533 9h9c:AAA (2.4) BS01 FAD N/A GO:0004791 ... Q8IS93 40304242
    986534 9h9c:BBB (2.4) BS01 FAD N/A GO:0004791 ... Q8IS93 40304242
    986535 9h9c:CCC (2.4) BS01 FAD N/A GO:0004791 ... Q8IS93 40304242
    986536 9h9c:DDD (2.4) BS01 FAD N/A GO:0004791 ... Q8IS93 40304242
    986537 9h9d:A (2.09) BS01 A1ITG N/A GO:0004672 ... P68400 40116007
    986538 9h9d:B (2.09) BS01 A1ITG N/A GO:0004672 ... P68400 40116007
    986539 9h9e:A (3.6) BS01 CLR N/A GO:0004888 ... P14867 39553992
    986540 9h9e:B (3.6) BS01 CLR N/A GO:0005515 ... Q53FP2 39553992
    986541 9h9e:C (3.6) BS01 CLR N/A GO:0005515 ... Q53FP2 39553992
    986542 9h9e:D (3.6) BS01 CLR N/A GO:0004888 ... P14867 39553992
    986543 9h9h:B (3.8) BS01 rna N/A GO:0000028 ... P0A7V0 39386670
    986544 9h9h:B (3.8) BS02 ZN N/A GO:0000028 ... P0A7V0 39386670
    986545 9h9h:C (3.8) BS01 rna N/A GO:0000028 ... P0A7V3 39386670
    986546 9h9h:D (3.8) BS01 rna N/A GO:0000028 ... P0A7V8 39386670
    986547 9h9h:E (3.8) BS01 rna N/A GO:0000028 ... P0A7W1 39386670
    986548 9h9h:F (3.8) BS01 rna N/A GO:0002181 ... P02358 39386670
    986549 9h9h:G (3.8) BS01 rna N/A GO:0000028 ... P02359 39386670
    986550 9h9h:H (3.8) BS01 rna N/A GO:0000028 ... P0A7W7 39386670
    986551 9h9h:I (3.8) BS01 rna N/A GO:0002181 ... P0A7X3 39386670
    986552 9h9h:J (3.8) BS01 rna N/A GO:0000049 ... P0A7R5 39386670
    986553 9h9h:K (3.8) BS01 rna N/A GO:0002181 ... P0A7R9 39386670
    986554 9h9h:L (3.8) BS01 rna N/A GO:0000049 ... P0A7S3 39386670
    986555 9h9h:M (3.8) BS01 rna N/A GO:0000049 ... P0A7S9 39386670
    986556 9h9h:N (3.8) BS01 rna N/A GO:0000028 ... P0AG59 39386670
    986557 9h9h:O (3.8) BS01 rna N/A GO:0000028 ... P0ADZ4 39386670
    986558 9h9h:P (3.8) BS01 rna N/A GO:0000028 ... P0A7T3 39386670
    986559 9h9h:Q (3.8) BS01 rna N/A GO:0000028 ... P0AG63 39386670
    986560 9h9h:R (3.8) BS01 rna N/A GO:0002181 ... P0A7T7 39386670
    986561 9h9h:S (3.8) BS01 rna N/A GO:0002181 ... P0A7U3 39386670
    986562 9h9h:T (3.8) BS01 rna N/A GO:0000028 ... P0A7U7 39386670
    986563 9h9h:U (3.8) BS01 rna N/A GO:0000028 ... P68679 39386670
    986564 9h9h:X (3.8) BS01 rna N/A GO:0003676 ... P69222 39386670
    986565 9h9h:Y (3.8) BS01 rna N/A GO:0003743 ... P0A705 39386670
    986566 9h9h:Z (3.8) BS01 rna N/A GO:0003743 ... P0A707 39386670
    986567 9h9h:Z (3.8) BS02 rna N/A GO:0003743 ... P0A707 39386670
    986568 9h9i:B (3.2) BS01 rna N/A GO:0000028 ... P0A7V0 39386670
    986569 9h9i:B (3.2) BS02 ZN N/A GO:0000028 ... P0A7V0 39386670
    986570 9h9i:C (3.2) BS01 rna N/A GO:0000028 ... P0A7V3 39386670
    986571 9h9i:G (3.2) BS01 rna N/A GO:0000028 ... P02359 39386670
    986572 9h9i:I (3.2) BS01 rna N/A GO:0002181 ... P0A7X3 39386670
    986573 9h9i:J (3.2) BS01 rna N/A GO:0000049 ... P0A7R5 39386670
    986574 9h9i:M (3.2) BS01 rna N/A GO:0000049 ... P0A7S9 39386670
    986575 9h9i:N (3.2) BS01 rna N/A GO:0000028 ... P0AG59 39386670
    986576 9h9i:S (3.2) BS01 rna N/A GO:0002181 ... P0A7U3 39386670
    986577 9h9j:D (3.2) BS01 rna N/A GO:0000028 ... P0A7V8 39386670
    986578 9h9j:E (3.2) BS01 rna N/A GO:0000028 ... P0A7W1 39386670
    986579 9h9j:F (3.2) BS01 rna N/A GO:0002181 ... P02358 39386670
    986580 9h9j:H (3.2) BS01 rna N/A GO:0000028 ... P0A7W7 39386670
    986581 9h9j:K (3.2) BS01 rna N/A GO:0002181 ... P0A7R9 39386670
    986582 9h9j:L (3.2) BS01 rna N/A GO:0000049 ... P0A7S3 39386670
    986583 9h9j:O (3.2) BS01 rna N/A GO:0000028 ... P0ADZ4 39386670
    986584 9h9j:P (3.2) BS01 rna N/A GO:0000028 ... P0A7T3 39386670
    986585 9h9j:Q (3.2) BS01 rna N/A GO:0000028 ... P0AG63 39386670
    986586 9h9j:R (3.2) BS01 rna N/A GO:0002181 ... P0A7T7 39386670
    986587 9h9j:T (3.2) BS01 rna N/A GO:0000028 ... P0A7U7 39386670
    986588 9h9j:U (3.2) BS01 rna N/A GO:0000028 ... P68679 39386670
    986589 9h9j:X (3.2) BS01 rna N/A GO:0003676 ... P69222 39386670
    986590 9h9j:Z (3.2) BS01 rna N/A GO:0003743 ... P0A707 39386670
    986591 9h9k:B (3.8) BS01 rna N/A GO:0000028 ... P0A7V0 39386670
    986592 9h9k:B (3.8) BS02 ZN N/A GO:0000028 ... P0A7V0 39386670
    986593 9h9k:C (3.8) BS01 rna N/A GO:0000028 ... P0A7V3 39386670
    986594 9h9k:G (3.8) BS01 rna N/A GO:0000028 ... P02359 39386670
    986595 9h9k:I (3.8) BS01 rna N/A GO:0002181 ... P0A7X3 39386670
    986596 9h9k:J (3.8) BS01 rna N/A GO:0000049 ... P0A7R5 39386670
    986597 9h9k:M (3.8) BS01 rna N/A GO:0000049 ... P0A7S9 39386670
    986598 9h9k:N (3.8) BS01 rna N/A GO:0000028 ... P0AG59 39386670
    986599 9h9k:S (3.8) BS01 rna N/A GO:0002181 ... P0A7U3 39386670
    986600 9h9l:D (3.2) BS01 rna N/A GO:0000028 ... P0A7V8 39386670

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).