SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 4924 4925 4926 4927 4928 4929 4930 4931 4932 4933 4934 4935 4936 4937 4938 4939 4940 4941 4942 4943 4944 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    986601 9h9l:E (3.2) BS01 rna N/A GO:0000028 ... P0A7W1 39386670
    986602 9h9l:F (3.2) BS01 rna N/A GO:0002181 ... P02358 39386670
    986603 9h9l:H (3.2) BS01 rna N/A GO:0000028 ... P0A7W7 39386670
    986604 9h9l:K (3.2) BS01 rna N/A GO:0002181 ... P0A7R9 39386670
    986605 9h9l:L (3.2) BS01 rna N/A GO:0000049 ... P0A7S3 39386670
    986606 9h9l:O (3.2) BS01 rna N/A GO:0000028 ... P0ADZ4 39386670
    986607 9h9l:P (3.2) BS01 rna N/A GO:0000028 ... P0A7T3 39386670
    986608 9h9l:Q (3.2) BS01 rna N/A GO:0000028 ... P0AG63 39386670
    986609 9h9l:R (3.2) BS01 rna N/A GO:0002181 ... P0A7T7 39386670
    986610 9h9l:T (3.2) BS01 rna N/A GO:0000028 ... P0A7U7 39386670
    986611 9h9l:U (3.2) BS01 rna N/A GO:0000028 ... P68679 39386670
    986612 9h9m:B (3.1) BS01 rna N/A GO:0000028 ... P0A7V0 39386670
    986613 9h9m:B (3.1) BS02 ZN N/A GO:0000028 ... P0A7V0 39386670
    986614 9h9m:C (3.1) BS01 rna N/A GO:0000028 ... P0A7V3 39386670
    986615 9h9m:G (3.1) BS01 rna N/A GO:0000028 ... P02359 39386670
    986616 9h9m:I (3.1) BS01 rna N/A GO:0002181 ... P0A7X3 39386670
    986617 9h9m:J (3.1) BS01 rna N/A GO:0000049 ... P0A7R5 39386670
    986618 9h9m:M (3.1) BS01 rna N/A GO:0000049 ... P0A7S9 39386670
    986619 9h9m:N (3.1) BS01 rna N/A GO:0000028 ... P0AG59 39386670
    986620 9h9m:S (3.1) BS01 rna N/A GO:0002181 ... P0A7U3 39386670
    986621 9h9n:D (3.1) BS01 rna N/A GO:0000028 ... P0A7V8 39386670
    986622 9h9n:E (3.1) BS01 rna N/A GO:0000028 ... P0A7W1 39386670
    986623 9h9n:F (3.1) BS01 rna N/A GO:0002181 ... P02358 39386670
    986624 9h9n:H (3.1) BS01 rna N/A GO:0000028 ... P0A7W7 39386670
    986625 9h9n:K (3.1) BS01 rna N/A GO:0002181 ... P0A7R9 39386670
    986626 9h9n:L (3.1) BS01 rna N/A GO:0000049 ... P0A7S3 39386670
    986627 9h9n:O (3.1) BS01 rna N/A GO:0000028 ... P0ADZ4 39386670
    986628 9h9n:P (3.1) BS01 rna N/A GO:0000028 ... P0A7T3 39386670
    986629 9h9n:Q (3.1) BS01 rna N/A GO:0000028 ... P0AG63 39386670
    986630 9h9n:R (3.1) BS01 rna N/A GO:0002181 ... P0A7T7 39386670
    986631 9h9n:T (3.1) BS01 rna N/A GO:0000028 ... P0A7U7 39386670
    986632 9h9n:U (3.1) BS01 rna N/A GO:0000028 ... P68679 39386670
    986633 9h9o:A (2.12) BS01 A1ITH N/A GO:0004842 ... P46934 40437006
    986634 9h9p:l (4.5) BS01 GDP N/A GO:0000070 ... P23258 39757296
    986635 9h9p:m (4.5) BS01 GDP N/A GO:0000070 ... P23258 39757296
    986636 9h9t:A (2.17) BS01 A1ITT N/A GO:0004842 ... P46934 40437006
    986637 9ha1:2 (4.17) BS01 rna N/A GO:0002181 ... P0A7P5 39794318
    986638 9ha1:D (4.17) BS01 rna N/A GO:0000027 ... P60438 39794318
    986639 9ha1:E (4.17) BS01 rna N/A GO:0001070 ... P60723 39794318
    986640 9ha1:J (4.17) BS01 rna N/A GO:0002181 ... P0AA10 39794318
    986641 9ha1:K (4.17) BS01 rna N/A GO:0002181 ... P0ADY3 39794318
    986642 9ha1:L (4.17) BS01 rna N/A GO:0002181 ... P02413 39794318
    986643 9ha1:N (4.17) BS01 rna N/A GO:0000027 ... P0AG44 39794318
    986644 9ha1:P (4.17) BS01 rna N/A GO:0000027 ... P0A7K6 39794318
    986645 9ha1:Q (4.17) BS01 rna N/A GO:0000027 ... P0A7L3 39794318
    986646 9ha1:R (4.17) BS01 rna N/A GO:0002181 ... P0AG48 39794318
    986647 9ha1:T (4.17) BS01 rna N/A GO:0000027 ... P0ADZ0 39794318
    986648 9ha1:U (4.17) BS01 rna N/A GO:0000027 ... P60624 39794318
    986649 9ha1:Y (4.17) BS01 rna N/A GO:0000027 ... P0A7M6 39794318
    986650 9ha2:2 (4.17) BS01 rna N/A GO:0002181 ... P0A7P5 39794318
    986651 9ha2:D (4.17) BS01 rna N/A GO:0000027 ... P60438 39794318
    986652 9ha2:E (4.17) BS01 rna N/A GO:0001070 ... P60723 39794318
    986653 9ha2:J (4.17) BS01 rna N/A GO:0002181 ... P0AA10 39794318
    986654 9ha2:K (4.17) BS01 rna N/A GO:0002181 ... P0ADY3 39794318
    986655 9ha2:L (4.17) BS01 rna N/A GO:0002181 ... P02413 39794318
    986656 9ha2:N (4.17) BS01 rna N/A GO:0000027 ... P0AG44 39794318
    986657 9ha2:P (4.17) BS01 rna N/A GO:0000027 ... P0A7K6 39794318
    986658 9ha2:Q (4.17) BS01 rna N/A GO:0000027 ... P0A7L3 39794318
    986659 9ha2:R (4.17) BS01 rna N/A GO:0002181 ... P0AG48 39794318
    986660 9ha2:T (4.17) BS01 rna N/A GO:0000027 ... P0ADZ0 39794318
    986661 9ha2:U (4.17) BS01 rna N/A GO:0000027 ... P60624 39794318
    986662 9ha2:Y (4.17) BS01 rna N/A GO:0000027 ... P0A7M6 39794318
    986663 9ha3:2 (3.62) BS01 rna N/A GO:0002181 ... P0A7P5 39794318
    986664 9ha3:D (3.62) BS01 rna N/A GO:0000027 ... P60438 39794318
    986665 9ha3:E (3.62) BS01 rna N/A GO:0001070 ... P60723 39794318
    986666 9ha3:J (3.62) BS01 rna N/A GO:0002181 ... P0AA10 39794318
    986667 9ha3:L (3.62) BS01 rna N/A GO:0002181 ... P02413 39794318
    986668 9ha3:N (3.62) BS01 rna N/A GO:0000027 ... P0AG44 39794318
    986669 9ha3:Q (3.62) BS01 rna N/A GO:0000027 ... P0A7L3 39794318
    986670 9ha3:R (3.62) BS01 rna N/A GO:0002181 ... P0AG48 39794318
    986671 9ha3:T (3.62) BS01 rna N/A GO:0000027 ... P0ADZ0 39794318
    986672 9ha3:U (3.62) BS01 rna N/A GO:0000027 ... P60624 39794318
    986673 9ha3:Y (3.62) BS01 rna N/A GO:0000027 ... P0A7M6 39794318
    986674 9ha3:Z (3.62) BS01 rna N/A GO:0000027 ... P0AG51 39794318
    986675 9ha4:2 (4.26) BS01 rna N/A GO:0002181 ... P0A7P5 39794318
    986676 9ha4:D (4.26) BS01 rna N/A GO:0000027 ... P60438 39794318
    986677 9ha4:E (4.26) BS01 rna N/A GO:0001070 ... P60723 39794318
    986678 9ha4:F (4.26) BS01 rna N/A GO:0000027 ... P62399 39794318
    986679 9ha4:F (4.26) BS02 rna N/A GO:0000027 ... P62399 39794318
    986680 9ha4:J (4.26) BS01 rna N/A GO:0002181 ... P0AA10 39794318
    986681 9ha4:K (4.26) BS01 rna N/A GO:0002181 ... P0ADY3 39794318
    986682 9ha4:L (4.26) BS01 rna N/A GO:0002181 ... P02413 39794318
    986683 9ha4:N (4.26) BS01 rna N/A GO:0000027 ... P0AG44 39794318
    986684 9ha4:O (4.26) BS01 rna N/A GO:0002181 ... P0C018 39794318
    986685 9ha4:O (4.26) BS02 rna N/A GO:0002181 ... P0C018 39794318
    986686 9ha4:P (4.26) BS01 rna N/A GO:0000027 ... P0A7K6 39794318
    986687 9ha4:Q (4.26) BS01 rna N/A GO:0000027 ... P0A7L3 39794318
    986688 9ha4:R (4.26) BS01 rna N/A GO:0002181 ... P0AG48 39794318
    986689 9ha4:T (4.26) BS01 rna N/A GO:0000027 ... P0ADZ0 39794318
    986690 9ha4:U (4.26) BS01 rna N/A GO:0000027 ... P60624 39794318
    986691 9ha4:V (4.26) BS01 rna N/A GO:0000027 ... P68919 39794318
    986692 9ha4:W (4.26) BS01 rna N/A GO:0003735 ... P0A7L8 39794318
    986693 9ha4:W (4.26) BS02 rna N/A GO:0003735 ... P0A7L8 39794318
    986694 9ha4:Y (4.26) BS01 rna N/A GO:0000027 ... P0A7M6 39794318
    986695 9ha4:Z (4.26) BS01 rna N/A GO:0000027 ... P0AG51 39794318
    986696 9ha4:Z (4.26) BS02 rna N/A GO:0000027 ... P0AG51 39794318
    986697 9ha5:0 (3.3) BS01 rna N/A GO:0000027 ... P0A7N4 39794318
    986698 9ha5:2 (3.3) BS01 rna N/A GO:0002181 ... P0A7P5 39794318
    986699 9ha5:C (3.3) BS01 rna N/A GO:0000027 ... P60422 39794318
    986700 9ha5:D (3.3) BS01 rna N/A GO:0000027 ... P60438 39794318
    986701 9ha5:E (3.3) BS01 rna N/A GO:0001070 ... P60723 39794318
    986702 9ha5:J (3.3) BS01 rna N/A GO:0002181 ... P0AA10 39794318
    986703 9ha5:K (3.3) BS01 rna N/A GO:0002181 ... P0ADY3 39794318
    986704 9ha5:L (3.3) BS01 rna N/A GO:0002181 ... P02413 39794318
    986705 9ha5:N (3.3) BS01 rna N/A GO:0000027 ... P0AG44 39794318
    986706 9ha5:P (3.3) BS01 rna N/A GO:0000027 ... P0A7K6 39794318
    986707 9ha5:Q (3.3) BS01 rna N/A GO:0000027 ... P0A7L3 39794318
    986708 9ha5:R (3.3) BS01 rna N/A GO:0002181 ... P0AG48 39794318
    986709 9ha5:S (3.3) BS01 rna N/A GO:0002181 ... P61175 39794318
    986710 9ha5:T (3.3) BS01 rna N/A GO:0000027 ... P0ADZ0 39794318
    986711 9ha5:U (3.3) BS01 rna N/A GO:0000027 ... P60624 39794318
    986712 9ha5:Y (3.3) BS01 rna N/A GO:0000027 ... P0A7M6 39794318
    986713 9ha5:Z (3.3) BS01 rna N/A GO:0000027 ... P0AG51 39794318
    986714 9ha6:0 (3.08) BS01 rna N/A GO:0000027 ... P0A7N4 39794318
    986715 9ha6:1 (3.08) BS01 rna N/A GO:0000027 ... P0A7N9 39794318
    986716 9ha6:2 (3.08) BS01 rna N/A GO:0002181 ... P0A7P5 39794318
    986717 9ha6:3 (3.08) BS01 rna N/A GO:0002181 ... P0A7Q1 39794318
    986718 9ha6:4 (3.08) BS01 rna N/A GO:0002181 ... P0A7Q6 39794318
    986719 9ha6:C (3.08) BS01 rna N/A GO:0000027 ... P60422 39794318
    986720 9ha6:D (3.08) BS01 rna N/A GO:0000027 ... P60438 39794318
    986721 9ha6:E (3.08) BS01 rna N/A GO:0001070 ... P60723 39794318
    986722 9ha6:E (3.08) BS02 peptide N/A GO:0001070 ... P60723 39794318
    986723 9ha6:F (3.08) BS01 rna N/A GO:0000027 ... P62399 39794318
    986724 9ha6:F (3.08) BS02 rna N/A GO:0000027 ... P62399 39794318
    986725 9ha6:G (3.08) BS01 rna N/A GO:0000027 ... P0AG55 39794318
    986726 9ha6:H (3.08) BS01 rna N/A GO:0002181 ... P0A7R1 39794318
    986727 9ha6:J (3.08) BS01 rna N/A GO:0002181 ... P0AA10 39794318
    986728 9ha6:K (3.08) BS01 rna N/A GO:0002181 ... P0ADY3 39794318
    986729 9ha6:L (3.08) BS01 rna N/A GO:0002181 ... P02413 39794318
    986730 9ha6:M (3.08) BS01 rna N/A GO:0000027 ... P0ADY7 39794318
    986731 9ha6:M (3.08) BS02 rna N/A GO:0000027 ... P0ADY7 39794318
    986732 9ha6:N (3.08) BS01 rna N/A GO:0000027 ... P0AG44 39794318
    986733 9ha6:O (3.08) BS01 rna N/A GO:0002181 ... P0C018 39794318
    986734 9ha6:O (3.08) BS02 rna N/A GO:0002181 ... P0C018 39794318
    986735 9ha6:P (3.08) BS01 rna N/A GO:0000027 ... P0A7K6 39794318
    986736 9ha6:Q (3.08) BS01 rna N/A GO:0000027 ... P0A7L3 39794318
    986737 9ha6:R (3.08) BS01 rna N/A GO:0002181 ... P0AG48 39794318
    986738 9ha6:S (3.08) BS01 rna N/A GO:0002181 ... P61175 39794318
    986739 9ha6:T (3.08) BS01 rna N/A GO:0000027 ... P0ADZ0 39794318
    986740 9ha6:U (3.08) BS01 rna N/A GO:0000027 ... P60624 39794318
    986741 9ha6:V (3.08) BS01 rna N/A GO:0000027 ... P68919 39794318
    986742 9ha6:V (3.08) BS02 rna N/A GO:0000027 ... P68919 39794318
    986743 9ha6:W (3.08) BS01 rna N/A GO:0003735 ... P0A7L8 39794318
    986744 9ha6:W (3.08) BS02 rna N/A GO:0003735 ... P0A7L8 39794318
    986745 9ha6:X (3.08) BS01 rna N/A GO:0000027 ... P0A7M2 39794318
    986746 9ha6:Y (3.08) BS01 rna N/A GO:0000027 ... P0A7M6 39794318
    986747 9ha6:Z (3.08) BS01 rna N/A GO:0000027 ... P0AG51 39794318
    986748 9ha6:Z (3.08) BS02 rna N/A GO:0000027 ... P0AG51 39794318
    986749 9ha7:2 (4.37) BS01 rna N/A GO:0002181 ... P0A7P5 39794318
    986750 9ha7:D (4.37) BS01 rna N/A GO:0000027 ... P60438 39794318
    986751 9ha7:E (4.37) BS01 rna N/A GO:0001070 ... P60723 39794318
    986752 9ha7:F (4.37) BS01 rna N/A GO:0000027 ... P62399 39794318
    986753 9ha7:F (4.37) BS02 rna N/A GO:0000027 ... P62399 39794318
    986754 9ha7:J (4.37) BS01 rna N/A GO:0002181 ... P0AA10 39794318
    986755 9ha7:L (4.37) BS01 rna N/A GO:0002181 ... P02413 39794318
    986756 9ha7:N (4.37) BS01 rna N/A GO:0000027 ... P0AG44 39794318
    986757 9ha7:O (4.37) BS01 rna N/A GO:0002181 ... P0C018 39794318
    986758 9ha7:O (4.37) BS02 rna N/A GO:0002181 ... P0C018 39794318
    986759 9ha7:Q (4.37) BS01 rna N/A GO:0000027 ... P0A7L3 39794318
    986760 9ha7:R (4.37) BS01 rna N/A GO:0002181 ... P0AG48 39794318
    986761 9ha7:T (4.37) BS01 rna N/A GO:0000027 ... P0ADZ0 39794318
    986762 9ha7:T (4.37) BS02 peptide N/A GO:0000027 ... P0ADZ0 39794318
    986763 9ha7:U (4.37) BS01 rna N/A GO:0000027 ... P60624 39794318
    986764 9ha7:V (4.37) BS01 rna N/A GO:0000027 ... P68919 39794318
    986765 9ha7:W (4.37) BS01 rna N/A GO:0003735 ... P0A7L8 39794318
    986766 9ha7:W (4.37) BS02 rna N/A GO:0003735 ... P0A7L8 39794318
    986767 9ha7:Y (4.37) BS01 rna N/A GO:0000027 ... P0A7M6 39794318
    986768 9ha7:Z (4.37) BS01 rna N/A GO:0000027 ... P0AG51 39794318
    986769 9ha7:Z (4.37) BS02 rna N/A GO:0000027 ... P0AG51 39794318
    986770 9haa:A (3.14) BS01 BUA N/A GO:0004888 ... P31644
    P42212
    N/A
    986771 9haa:B (3.14) BS01 BUA N/A GO:0004888 ... P28472
    P42212
    N/A
    986772 9haa:D (3.14) BS01 BUA N/A GO:0004888 ... P31644
    P42212
    N/A
    986773 9haa:E (3.14) BS01 BUA N/A GO:0004888 ... P28472
    P42212
    N/A
    986774 9hab:A (2.86) BS01 MN N/A GO:0004722 ... N/A N/A
    986775 9hab:A (2.86) BS02 MN N/A GO:0004722 ... N/A N/A
    986776 9hab:A (2.86) BS03 MN N/A GO:0004722 ... N/A N/A
    986777 9hah:A (2.6) BS01 A1ICJ N/A GO:0003824 ... P04021 39939832
    986778 9hai:0 (3.01) BS01 rna N/A GO:0000027 ... P0A7N4 39794318
    986779 9hai:2 (3.01) BS01 rna N/A GO:0002181 ... P0A7P5 39794318
    986780 9hai:D (3.01) BS01 rna N/A GO:0000027 ... P60438 39794318
    986781 9hai:E (3.01) BS01 rna N/A GO:0001070 ... P60723 39794318
    986782 9hai:J (3.01) BS01 rna N/A GO:0002181 ... P0AA10 39794318
    986783 9hai:K (3.01) BS01 rna N/A GO:0002181 ... P0ADY3 39794318
    986784 9hai:L (3.01) BS01 rna N/A GO:0002181 ... P02413 39794318
    986785 9hai:N (3.01) BS01 rna N/A GO:0000027 ... P0AG44 39794318
    986786 9hai:P (3.01) BS01 rna N/A GO:0000027 ... P0A7K6 39794318
    986787 9hai:Q (3.01) BS01 rna N/A GO:0000027 ... P0A7L3 39794318
    986788 9hai:R (3.01) BS01 rna N/A GO:0002181 ... P0AG48 39794318
    986789 9hai:S (3.01) BS01 rna N/A GO:0002181 ... P61175 39794318
    986790 9hai:T (3.01) BS01 rna N/A GO:0000027 ... P0ADZ0 39794318
    986791 9hai:U (3.01) BS01 rna N/A GO:0000027 ... P60624 39794318
    986792 9hai:Y (3.01) BS01 rna N/A GO:0000027 ... P0A7M6 39794318
    986793 9hai:Z (3.01) BS01 rna N/A GO:0000027 ... P0AG51 39794318
    986794 9haj:A (1.276) BS01 A1ITJ N/A GO:0008233 ... P0DTC1 40186586
    986795 9haj:B (1.276) BS01 A1ITJ N/A GO:0008233 ... P0DTC1 40186586
    986796 9hak:A (1.25) BS01 A1ITI N/A GO:0008233 ... P0DTC1 40186586
    986797 9hak:B (1.25) BS01 A1ITI N/A GO:0008233 ... P0DTC1 40186586
    986798 9hal:D (4.49) BS01 rna N/A GO:0000027 ... P60438 39794318
    986799 9hal:E (4.49) BS01 rna N/A GO:0001070 ... P60723 39794318
    986800 9hal:J (4.49) BS01 rna N/A GO:0002181 ... P0AA10 39794318

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).