SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    986801 9hal:L (4.49) BS01 rna N/A GO:0002181 ... P02413 39794318
    986802 9hal:N (4.49) BS01 rna N/A GO:0000027 ... P0AG44 39794318
    986803 9hal:Q (4.49) BS01 rna N/A GO:0000027 ... P0A7L3 39794318
    986804 9hal:R (4.49) BS01 rna N/A GO:0002181 ... P0AG48 39794318
    986805 9hal:U (4.49) BS01 rna N/A GO:0000027 ... P60624 39794318
    986806 9ham:D (5.06) BS01 rna N/A GO:0000027 ... P60438 39794318
    986807 9ham:E (5.06) BS01 rna N/A GO:0001070 ... P60723 39794318
    986808 9ham:G (5.06) BS01 rna N/A GO:0000027 ... P0AG55 39794318
    986809 9ham:J (5.06) BS01 rna N/A GO:0002181 ... P0AA10 39794318
    986810 9ham:K (5.06) BS01 rna N/A GO:0002181 ... P0ADY3 39794318
    986811 9ham:L (5.06) BS01 rna N/A GO:0002181 ... P02413 39794318
    986812 9ham:N (5.06) BS01 rna N/A GO:0000027 ... P0AG44 39794318
    986813 9ham:P (5.06) BS01 rna N/A GO:0000027 ... P0A7K6 39794318
    986814 9ham:Q (5.06) BS01 rna N/A GO:0000027 ... P0A7L3 39794318
    986815 9ham:R (5.06) BS01 rna N/A GO:0002181 ... P0AG48 39794318
    986816 9ham:U (5.06) BS01 rna N/A GO:0000027 ... P60624 39794318
    986817 9ham:Z (5.06) BS01 rna N/A GO:0000027 ... P0AG51 39794318
    986818 9hao:A (1.94) BS01 XE9 N/A GO:0005515 ... P31224 N/A
    986819 9hao:C (1.94) BS01 LPX N/A GO:0005515 ... P31224 N/A
    986820 9hao:C (1.94) BS02 LPX N/A GO:0005515 ... P31224 N/A
    986821 9hap:R (2.5) BS01 A1IT8 N/A GO:0001992 ... P30518 40274867
    986822 9haq:A (2.693) BS01 NLE N/A GO:0003824 ... A0A1H1YBL2 N/A
    986823 9haq:A (2.693) BS02 NLE N/A GO:0003824 ... A0A1H1YBL2 N/A
    986824 9haq:B (2.693) BS01 NLE N/A GO:0003824 ... A0A1H1YBL2 N/A
    986825 9haq:B (2.693) BS02 NLE N/A GO:0003824 ... A0A1H1YBL2 N/A
    986826 9haq:C (2.693) BS01 PY6 N/A GO:0003824 ... A0A1H1YBL2 N/A
    986827 9haq:C (2.693) BS02 NLE N/A GO:0003824 ... A0A1H1YBL2 N/A
    986828 9haq:D (2.693) BS01 PY6 N/A GO:0003824 ... A0A1H1YBL2 N/A
    986829 9haq:D (2.693) BS02 NLE N/A GO:0003824 ... A0A1H1YBL2 N/A
    986830 9haq:E (2.693) BS01 PY6 N/A GO:0003824 ... A0A1H1YBL2 N/A
    986831 9haq:E (2.693) BS02 NLE N/A GO:0003824 ... A0A1H1YBL2 N/A
    986832 9haq:F (2.693) BS01 PY6 N/A GO:0003824 ... A0A1H1YBL2 N/A
    986833 9haq:F (2.693) BS02 NLE N/A GO:0003824 ... A0A1H1YBL2 N/A
    986834 9haq:G (2.693) BS01 PY6 N/A GO:0003824 ... A0A1H1YBL2 N/A
    986835 9haq:G (2.693) BS02 PY6 N/A GO:0003824 ... A0A1H1YBL2 N/A
    986836 9haq:H (2.693) BS01 PY6 N/A GO:0003824 ... A0A1H1YBL2 N/A
    986837 9haq:H (2.693) BS02 PY6 N/A GO:0003824 ... A0A1H1YBL2 N/A
    986838 9haq:I (2.693) BS01 PY6 N/A GO:0003824 ... A0A1H1YBL2 N/A
    986839 9haq:I (2.693) BS02 NLE N/A GO:0003824 ... A0A1H1YBL2 N/A
    986840 9haq:J (2.693) BS01 PY6 N/A GO:0003824 ... A0A1H1YBL2 N/A
    986841 9haq:J (2.693) BS02 NLE N/A GO:0003824 ... A0A1H1YBL2 N/A
    986842 9haq:K (2.693) BS01 PY6 N/A GO:0003824 ... A0A1H1YBL2 N/A
    986843 9haq:L (2.693) BS01 PY6 N/A GO:0003824 ... A0A1H1YBL2 N/A
    986844 9haq:M (2.693) BS01 PY6 N/A GO:0003824 ... A0A1H1YBL2 N/A
    986845 9haq:M (2.693) BS02 PY6 N/A GO:0003824 ... A0A1H1YBL2 N/A
    986846 9haq:N (2.693) BS01 PY6 N/A GO:0003824 ... A0A1H1YBL2 N/A
    986847 9haq:N (2.693) BS02 PY6 N/A GO:0003824 ... A0A1H1YBL2 N/A
    986848 9haq:O (2.693) BS01 PY6 N/A GO:0003824 ... A0A1H1YBL2 N/A
    986849 9haq:O (2.693) BS02 PLP N/A GO:0003824 ... A0A1H1YBL2 N/A
    986850 9haq:O (2.693) BS03 PY6 N/A GO:0003824 ... A0A1H1YBL2 N/A
    986851 9haq:P (2.693) BS01 PY6 N/A GO:0003824 ... A0A1H1YBL2 N/A
    986852 9haq:P (2.693) BS02 PLP N/A GO:0003824 ... A0A1H1YBL2 N/A
    986853 9haq:P (2.693) BS03 PY6 N/A GO:0003824 ... A0A1H1YBL2 N/A
    986854 9hav:A (2.22) BS01 BGC N/A N/A B9L4G2 N/A
    986855 9hav:B (2.22) BS01 BGC N/A N/A B9L4G2 N/A
    986856 9hav:C (2.22) BS01 BGC N/A N/A B9L4G2 N/A
    986857 9hav:D (2.22) BS01 BGC N/A N/A B9L4G2 N/A
    986858 9hav:E (2.22) BS01 BGC N/A N/A B9L4G2 N/A
    986859 9hav:F (2.22) BS01 BGC N/A N/A B9L4G2 N/A
    986860 9hay:A (2.393) BS01 BG6 N/A N/A B9L4G2 N/A
    986861 9hay:B (2.393) BS01 BG6 N/A N/A B9L4G2 N/A
    986862 9hay:C (2.393) BS01 BG6 N/A N/A B9L4G2 N/A
    986863 9hay:D (2.393) BS01 BG6 N/A N/A B9L4G2 N/A
    986864 9hay:E (2.393) BS01 BG6 N/A N/A B9L4G2 N/A
    986865 9hay:F (2.393) BS01 BG6 N/A N/A B9L4G2 N/A
    986866 9hay:G (2.393) BS01 BG6 N/A N/A B9L4G2 N/A
    986867 9hay:H (2.393) BS01 BG6 N/A N/A B9L4G2 N/A
    986868 9hay:I (2.393) BS01 BG6 N/A N/A B9L4G2 N/A
    986869 9hay:J (2.393) BS01 BG6 N/A N/A B9L4G2 N/A
    986870 9hay:K (2.393) BS01 BG6 N/A N/A B9L4G2 N/A
    986871 9hay:L (2.393) BS01 BG6 N/A N/A B9L4G2 N/A
    986872 9hay:M (2.393) BS01 BG6 N/A N/A B9L4G2 N/A
    986873 9hay:N (2.393) BS01 BG6 N/A N/A B9L4G2 N/A
    986874 9hay:O (2.393) BS01 BG6 N/A N/A B9L4G2 N/A
    986875 9hay:P (2.393) BS01 BG6 N/A N/A B9L4G2 N/A
    986876 9hay:Q (2.393) BS01 BG6 N/A N/A B9L4G2 N/A
    986877 9hay:R (2.393) BS01 BG6 N/A N/A B9L4G2 N/A
    986878 9haz:A (2.434) BS01 SF4 N/A GO:0005524 ... P00459 40934104
    986879 9haz:B (2.434) BS01 SF4 N/A GO:0005524 ... P00459 40934104
    986880 9haz:C (2.434) BS01 SF4 N/A GO:0005524 ... P00459 40934104
    986881 9haz:C (2.434) BS02 MG N/A GO:0005524 ... P00459 40934104
    986882 9haz:D (2.434) BS01 SF4 N/A GO:0005524 ... P00459 40934104
    986883 9haz:D (2.434) BS02 MG N/A GO:0005524 ... P00459 40934104
    986884 9haz:D (2.434) BS03 MG N/A GO:0005524 ... P00459 40934104
    986885 9hb0:A (1.7) BS01 A1ITU N/A GO:0004190 ... Q8IAS0 40043835
    986886 9hb4:A (3.56) BS01 ADP N/A GO:0000492 ... Q9Y265 41667496
    986887 9hb4:B (3.56) BS01 ADP N/A GO:0000492 ... Q9Y265 41667496
    986888 9hb4:C (3.56) BS01 ADP N/A GO:0000492 ... Q9Y265 41667496
    986889 9hb4:D (3.56) BS01 ADP N/A GO:0000492 ... Q9Y230 41667496
    986890 9hb4:E (3.56) BS01 ADP N/A GO:0000492 ... Q9Y230 41667496
    986891 9hb4:F (3.56) BS01 peptide N/A GO:0000492 ... Q9Y230 41667496
    986892 9hb4:F (3.56) BS02 ADP N/A GO:0000492 ... Q9Y230 41667496
    986893 9hb7:A (2.95519) BS01 FE N/A GO:0004497 ... Q8IWU9 40534674
    986894 9hb7:A (2.95519) BS02 JCR N/A GO:0004497 ... Q8IWU9 40534674
    986895 9hb7:B (2.95519) BS01 FE N/A GO:0004497 ... Q8IWU9 40534674
    986896 9hb7:B (2.95519) BS02 JCR N/A GO:0004497 ... Q8IWU9 40534674
    986897 9hb8:A (2.89634) BS01 FE N/A GO:0004497 ... Q8IWU9 40534674
    986898 9hb8:A (2.89634) BS02 UVU N/A GO:0004497 ... Q8IWU9 40534674
    986899 9hb8:B (2.89634) BS01 FE N/A GO:0004497 ... Q8IWU9 40534674
    986900 9hb8:B (2.89634) BS02 UVU N/A GO:0004497 ... Q8IWU9 40534674
    986901 9hb9:A (2.658) BS01 ICS N/A GO:0009399 ... P07328 40934104
    986902 9hb9:A (2.658) BS02 CLF N/A GO:0009399 ... P07328 40934104
    986903 9hb9:B (2.658) BS01 CLF N/A GO:0009399 ... P07329 40934104
    986904 9hb9:B (2.658) BS02 MG N/A GO:0009399 ... P07329 40934104
    986905 9hb9:B (2.658) BS03 MG N/A GO:0009399 ... P07329 40934104
    986906 9hb9:C (2.658) BS01 ICS N/A GO:0009399 ... P07328 40934104
    986907 9hb9:C (2.658) BS02 CLF N/A GO:0009399 ... P07328 40934104
    986908 9hb9:D (2.658) BS01 MG N/A GO:0009399 ... P07329 40934104
    986909 9hb9:D (2.658) BS02 CLF N/A GO:0009399 ... P07329 40934104
    986910 9hb9:D (2.658) BS03 MG N/A GO:0009399 ... P07329 40934104
    986911 9hba:A (1.51) BS01 HEM N/A GO:0004601 ... P69905 N/A
    986912 9hba:A (1.51) BS02 A1ITR N/A GO:0004601 ... P69905 N/A
    986913 9hba:A (1.51) BS03 A1ITR N/A GO:0004601 ... P69905 N/A
    986914 9hba:B (1.51) BS01 HEM N/A GO:0004601 ... P68871 N/A
    986915 9hba:C (1.51) BS01 A1ITR N/A GO:0004601 ... P69905 N/A
    986916 9hba:C (1.51) BS02 A1ITR N/A GO:0004601 ... P69905 N/A
    986917 9hba:C (1.51) BS03 HEM N/A GO:0004601 ... P69905 N/A
    986918 9hba:D (1.51) BS01 HEM N/A GO:0004601 ... P68871 N/A
    986919 9hbc:A (1.816) BS01 ICS N/A GO:0009399 ... P07329 40934104
    986920 9hbc:A (1.816) BS02 CLF N/A GO:0009399 ... P07329 40934104
    986921 9hbc:B (1.816) BS01 CLF N/A GO:0009399 ... P07329 40934104
    986922 9hbc:B (1.816) BS02 MG N/A GO:0009399 ... P07329 40934104
    986923 9hbc:B (1.816) BS03 MG N/A GO:0009399 ... P07329 40934104
    986924 9hbc:C (1.816) BS01 ICS N/A GO:0009399 ... P07329 40934104
    986925 9hbc:C (1.816) BS02 CLF N/A GO:0009399 ... P07329 40934104
    986926 9hbc:D (1.816) BS01 MG N/A GO:0009399 ... P07329 40934104
    986927 9hbc:D (1.816) BS02 CLF N/A GO:0009399 ... P07329 40934104
    986928 9hbc:D (1.816) BS03 MG N/A GO:0009399 ... P07329 40934104
    986929 9hbd:A (1.09) BS01 7AZ N/A N/A A0AAP7ZHZ3 40178192
    986930 9hbd:A (1.09) BS02 7AZ N/A N/A A0AAP7ZHZ3 40178192
    986931 9hbd:A (1.09) BS03 BDF N/A N/A A0AAP7ZHZ3 40178192
    986932 9hbd:A (1.09) BS04 BDF N/A N/A A0AAP7ZHZ3 40178192
    986933 9hbd:B (1.09) BS01 7AZ N/A N/A A0AAP7ZHZ3 40178192
    986934 9hbd:B (1.09) BS02 7AZ N/A N/A A0AAP7ZHZ3 40178192
    986935 9hbd:B (1.09) BS03 BDF N/A N/A A0AAP7ZHZ3 40178192
    986936 9hbd:B (1.09) BS04 BDF N/A N/A A0AAP7ZHZ3 40178192
    986937 9hbe:A (1.19) BS01 BDF N/A N/A A0AAP7ZHZ3 40178192
    986938 9hbe:A (1.19) BS02 BDF N/A N/A A0AAP7ZHZ3 40178192
    986939 9hbe:A (1.19) BS03 7AZ N/A N/A A0AAP7ZHZ3 40178192
    986940 9hbe:A (1.19) BS04 7AZ N/A N/A A0AAP7ZHZ3 40178192
    986941 9hbe:B (1.19) BS01 BDF N/A N/A A0AAP7ZHZ3 40178192
    986942 9hbe:B (1.19) BS02 7AZ N/A N/A A0AAP7ZHZ3 40178192
    986943 9hbe:B (1.19) BS03 7AZ N/A N/A A0AAP7ZHZ3 40178192
    986944 9hbe:B (1.19) BS04 BDF N/A N/A A0AAP7ZHZ3 40178192
    986945 9hbf:A (1.19) BS01 7AZ N/A N/A A0AAP7ZHZ3 40178192
    986946 9hbg:A (1.28) BS01 BDF N/A N/A A0AAP7ZHZ3 40178192
    986947 9hbg:A (1.28) BS02 BDF N/A N/A A0AAP7ZHZ3 40178192
    986948 9hbg:A (1.28) BS03 7AZ N/A N/A A0AAP7ZHZ3 40178192
    986949 9hbm:A (1.83) BS01 A1ITN N/A GO:0005515 ... O95848 N/A
    986950 9hbm:A (1.83) BS02 MG N/A GO:0005515 ... O95848 N/A
    986951 9hbm:A (1.83) BS03 A1ITN N/A GO:0005515 ... O95848 N/A
    986952 9hbm:B (1.83) BS01 A1ITN N/A GO:0005515 ... O95848 N/A
    986953 9hbm:B (1.83) BS02 A1ITN N/A GO:0005515 ... O95848 N/A
    986954 9hbm:B (1.83) BS03 MG N/A GO:0005515 ... O95848 N/A
    986955 9hbn:A (1.824) BS01 ICS N/A GO:0009399 ... P07329 40934104
    986956 9hbn:A (1.824) BS02 CLF N/A GO:0009399 ... P07329 40934104
    986957 9hbn:B (1.824) BS01 CLF N/A GO:0009399 ... P07329 40934104
    986958 9hbn:B (1.824) BS02 MG N/A GO:0009399 ... P07329 40934104
    986959 9hbn:B (1.824) BS03 MG N/A GO:0009399 ... P07329 40934104
    986960 9hbn:B (1.824) BS04 MG N/A GO:0009399 ... P07329 40934104
    986961 9hbn:C (1.824) BS01 ICS N/A GO:0009399 ... P07329 40934104
    986962 9hbn:C (1.824) BS02 MG N/A GO:0009399 ... P07329 40934104
    986963 9hbn:C (1.824) BS03 CLF N/A GO:0009399 ... P07329 40934104
    986964 9hbn:D (1.824) BS01 MG N/A GO:0009399 ... P07329 40934104
    986965 9hbn:D (1.824) BS02 CLF N/A GO:0009399 ... P07329 40934104
    986966 9hbn:D (1.824) BS03 MG N/A GO:0009399 ... P07329 40934104
    986967 9hbo:A (2.45) BS01 A1IUK N/A GO:0004672 ... P00533 39869768
    986968 9hbo:B (2.45) BS01 A1IUK N/A GO:0004672 ... P00533 39869768
    986969 9hbq:A (1.795) BS01 A1ITO N/A GO:0008233 ... P0DTD1 N/A
    986970 9hbr:C (2.9) BS01 rna N/A N/A A0A142I7Z4 39995042
    986971 9hbr:D (2.9) BS01 peptide N/A N/A A0A142I7Z4 39995042
    986972 9hbr:D (2.9) BS02 rna N/A N/A A0A142I7Z4 39995042
    986973 9hbs:A (3.68) BS01 rna N/A N/A A0A142I7Z4 39995042
    986974 9hbs:B (3.68) BS01 rna N/A N/A A0A142I7Z4 39995042
    986975 9hbs:C (3.68) BS01 rna N/A N/A A0A142I7Z4 39995042
    986976 9hbs:D (3.68) BS01 rna N/A N/A A0A142I7Z4 39995042
    986977 9hbt:A (3.46) BS01 rna N/A N/A A0A142I7Z4 39995042
    986978 9hbt:B (3.46) BS01 rna N/A N/A A0A142I7Z4 39995042
    986979 9hbt:C (3.46) BS01 rna N/A N/A A0A142I7Z4 39995042
    986980 9hbt:D (3.46) BS01 rna N/A N/A A0A142I7Z4 39995042
    986981 9hbt:E (3.46) BS01 rna N/A N/A A0A142I7Z4 39995042
    986982 9hbu:C (3.51) BS01 rna N/A N/A A0A142I7Z4 39995042
    986983 9hbu:D (3.51) BS01 peptide N/A N/A A0A142I7Z4 39995042
    986984 9hbu:D (3.51) BS02 rna N/A N/A A0A142I7Z4 39995042
    986985 9hbv:C (3.38) BS01 rna N/A N/A A0A142I7Z4 39995042
    986986 9hbv:D (3.38) BS01 peptide N/A N/A A0A142I7Z4 39995042
    986987 9hbv:D (3.38) BS02 rna N/A N/A A0A142I7Z4 39995042
    986988 9hbw:A (3.59) BS01 rna N/A N/A A0A142I7Z4 39995042
    986989 9hbw:B (3.59) BS01 rna N/A N/A A0A142I7Z4 39995042
    986990 9hbw:C (3.59) BS01 rna N/A N/A A0A142I7Z4 39995042
    986991 9hbw:D (3.59) BS01 rna N/A N/A A0A142I7Z4 39995042
    986992 9hbx:C (3.04) BS01 rna N/A N/A A0A142I7Z4 39995042
    986993 9hbx:D (3.04) BS01 peptide N/A N/A A0A142I7Z4 39995042
    986994 9hbx:D (3.04) BS02 rna N/A N/A A0A142I7Z4 39995042
    986995 9hby:A (3.1) BS01 rna N/A N/A A0A142I7Z4 39995042
    986996 9hby:C (3.1) BS01 rna N/A N/A A0A142I7Z4 39995042
    986997 9hby:D (3.1) BS01 peptide N/A N/A A0A142I7Z4 39995042
    986998 9hby:D (3.1) BS02 rna N/A N/A A0A142I7Z4 39995042
    986999 9hbz:A (3.49) BS01 rna N/A N/A A0A142I7Z4 39995042
    987000 9hbz:B (3.49) BS01 rna N/A N/A A0A142I7Z4 39995042

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).