SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    987001 9hbz:C (3.49) BS01 rna N/A N/A A0A142I7Z4 39995042
    987002 9hbz:D (3.49) BS01 rna N/A N/A A0A142I7Z4 39995042
    987003 9hbz:E (3.49) BS01 rna N/A N/A A0A142I7Z4 39995042
    987004 9hbz:G (3.49) BS01 rna N/A N/A A0A142I7Z4 39995042
    987005 9hc0:A (2.33) BS01 4YI N/A GO:0003796 ... P00720
    P41594
    40521617
    987006 9hc1:A (1.493) BS01 A1ITP N/A GO:0008233 ... P0DTD1 N/A
    987007 9hc1:B (1.493) BS01 A1ITP N/A GO:0008233 ... P0DTD1 N/A
    987008 9hc2:A (1.27) BS01 GTQ N/A GO:0003796 ... P00698 N/A
    987009 9hc4:A (3.2) BS01 rna N/A GO:0003723 ... Q4FRM3 40113756
    987010 9hc4:A4 (3.2) BS01 rna N/A GO:0003735 ... Q4FUT9 40113756
    987011 9hc4:Af (3.2) BS01 rna N/A GO:0003735 ... Q4FUF6 40113756
    987012 9hc4:BQ (3.2) BS01 rna N/A GO:0003735 ... Q4FUE2 40113756
    987013 9hc4:Ba (3.2) BS01 rna N/A GO:0003735 ... Q4FPR4 40113756
    987014 9hc4:C1 (3.2) BS01 rna N/A GO:0003735 ... Q4FS19 40113756
    987015 9hc4:CT (3.2) BS01 rna N/A GO:0003676 ... Q4FUF0 40113756
    987016 9hc4:Cl (3.2) BS01 rna N/A GO:0002181 ... Q4FUF3 40113756
    987017 9hc4:Dm (3.2) BS01 rna N/A GO:0003723 ... Q4FUD2 40113756
    987018 9hc4:E5 (3.2) BS01 rna N/A GO:0003723 ... Q4FUD9 40113756
    987019 9hc4:E9 (3.2) BS01 rna N/A GO:0003735 ... A0A0M4U627 40113756
    987020 9hc4:F (3.2) BS01 rna N/A GO:0003723 ... Q4FRE4 40113756
    987021 9hc4:F7 (3.2) BS01 rna N/A GO:0000049 ... Q4FUE4 40113756
    987022 9hc4:F7 (3.2) BS02 rna N/A GO:0000049 ... Q4FUE4 40113756
    987023 9hc4:FG (3.2) BS01 rna N/A GO:0003735 ... Q4FS21 40113756
    987024 9hc4:GR (3.2) BS01 rna N/A GO:0002181 ... Q4FUE1 40113756
    987025 9hc4:GS (3.2) BS01 rna N/A GO:0000049 ... Q4FQG4 40113756
    987026 9hc4:HK (3.2) BS01 rna N/A GO:0003735 ... Q4FUE3 40113756
    987027 9hc4:IX (3.2) BS01 rna N/A GO:0003729 ... Q4FRE5 40113756
    987028 9hc4:JY (3.2) BS01 rna N/A GO:0000049 ... Q4FUF7 40113756
    987029 9hc4:Je (3.2) BS01 rna N/A GO:0003735 ... Q4FUE6 40113756
    987030 9hc4:Je (3.2) BS02 rna N/A GO:0003735 ... Q4FUE6 40113756
    987031 9hc4:KU (3.2) BS01 rna N/A GO:0003735 ... Q4FUD3 40113756
    987032 9hc4:Kd (3.2) BS01 rna N/A GO:0003735 ... Q4FUD7 40113756
    987033 9hc4:L6 (3.2) BS01 rna N/A GO:0000049 ... A0A0M4U4C3 40113756
    987034 9hc4:Lg (3.2) BS01 rna N/A GO:0003735 ... Q4FUE9 40113756
    987035 9hc4:Lg (3.2) BS02 rna N/A GO:0003735 ... Q4FUE9 40113756
    987036 9hc4:MB (3.2) BS01 rna N/A GO:0003735 ... Q4FUD0 40113756
    987037 9hc4:MM (3.2) BS01 rna N/A GO:0000049 ... Q4FUD4 40113756
    987038 9hc4:NV (3.2) BS01 rna N/A GO:0003735 ... Q4FV74 40113756
    987039 9hc4:Nc (3.2) BS01 rna N/A GO:0003735 ... Q4FUE0 40113756
    987040 9hc4:Nc (3.2) BS02 rna N/A GO:0003735 ... Q4FUE0 40113756
    987041 9hc4:OL (3.2) BS01 rna N/A GO:0003735 ... Q4FVL1 40113756
    987042 9hc4:OL (3.2) BS02 rna N/A GO:0003735 ... Q4FVL1 40113756
    987043 9hc4:Oi (3.2) BS01 rna N/A GO:0003735 ... Q4FQ45 40113756
    987044 9hc4:Oi (3.2) BS02 rna N/A GO:0003735 ... Q4FQ45 40113756
    987045 9hc4:PO (3.2) BS01 rna N/A GO:0000027 ... Q4FQ64 40113756
    987046 9hc4:Pj (3.2) BS01 rna N/A GO:0003735 ... Q4FQ42 40113756
    987047 9hc4:QZ (3.2) BS01 rna N/A GO:0003735 ... Q4FUE7 40113756
    987048 9hc4:Qb (3.2) BS01 rna N/A GO:0003723 ... Q4FRD7 40113756
    987049 9hc4:R3 (3.2) BS01 rna N/A GO:0003735 ... Q4FS20 40113756
    987050 9hc4:RF (3.2) BS01 rna N/A GO:0003735 ... Q4FUF1 40113756
    987051 9hc4:SP (3.2) BS01 rna N/A GO:0000028 ... Q4FUF2 40113756
    987052 9hc4:Sn (3.2) BS01 rna N/A GO:0003735 ... Q4FUF4 40113756
    987053 9hc4:TI (3.2) BS01 rna N/A GO:0003723 ... Q4FUE5 40113756
    987054 9hc4:To (3.2) BS01 rna N/A GO:0003723 ... Q4FRM3 40113756
    987055 9hc4:UC (3.2) BS01 rna N/A GO:0003723 ... Q4FVB4 40113756
    987056 9hc4:UC (3.2) BS02 rna N/A GO:0003723 ... Q4FVB4 40113756
    987057 9hc4:VH (3.2) BS01 rna N/A GO:0003735 ... Q4FRD8 40113756
    987058 9hc4:VH (3.2) BS02 rna N/A GO:0003735 ... Q4FRD8 40113756
    987059 9hc4:WD (3.2) BS01 rna N/A GO:0003735 ... Q4FR00 40113756
    987060 9hc4:XE (3.2) BS01 rna N/A GO:0003735 ... Q4FUE8 40113756
    987061 9hc4:YW (3.2) BS01 rna N/A GO:0003735 ... Q4FUD8 40113756
    987062 9hc4:YW (3.2) BS02 rna N/A GO:0003735 ... Q4FUD8 40113756
    987063 9hc4:aA (3.2) BS01 rna N/A GO:0003735 ... Q4FUC6 40113756
    987064 9hc4:bk (3.2) BS01 rna N/A GO:0003735 ... A0A0M4SWV1 40113756
    987065 9hc4:dh (3.2) BS01 rna N/A GO:0003735 ... Q4FQ63 40113756
    987066 9hc4:ep (3.2) BS01 rna N/A GO:0003735 ... Q4FUD5 40113756
    987067 9hc4:fJ (3.2) BS01 rna N/A GO:0003735 ... Q4FQE4 40113756
    987068 9hcc:0 (5.67) BS01 rna N/A GO:0003735 ... Q9DCI9 40562754
    987069 9hcc:0 (5.67) BS02 ZN N/A GO:0003735 ... Q9DCI9 40562754
    987070 9hcc:5 (5.67) BS01 rna N/A GO:0003735 ... Q921S7 40562754
    987071 9hcc:6 (5.67) BS01 rna N/A GO:0003674 ... Q8K2M0 40562754
    987072 9hcc:9 (5.67) BS01 rna N/A GO:0003735 ... Q9CQN7 40562754
    987073 9hcc:D (5.67) BS01 rna N/A GO:0003735 ... Q9D773 40562754
    987074 9hcc:E (5.67) BS01 rna N/A GO:0003735 ... Q99N95 40562754
    987075 9hcc:F (5.67) BS01 rna N/A GO:0003735 ... Q9DCU6 40562754
    987076 9hcc:H (5.67) BS01 rna N/A GO:0003735 ... Q3UK02 40562754
    987077 9hcc:I (5.67) BS01 rna N/A GO:0003735 ... Q3TBW2 40562754
    987078 9hcc:I (5.67) BS02 FES N/A GO:0003735 ... Q3TBW2 40562754
    987079 9hcc:J (5.67) BS01 rna N/A GO:0003735 ... Q9CQF0 40562754
    987080 9hcc:K (5.67) BS01 rna N/A GO:0003729 ... Q9D1P0 40562754
    987081 9hcc:L (5.67) BS01 rna N/A GO:0003735 ... Q9D1I6 40562754
    987082 9hcc:M (5.67) BS01 rna N/A GO:0003735 ... Q9CPR5 40562754
    987083 9hcc:O (5.67) BS01 rna N/A GO:0003735 ... Q9D8P4 40562754
    987084 9hcc:P (5.67) BS01 rna N/A GO:0003735 ... Q9CQL5 40562754
    987085 9hcc:Q (5.67) BS01 rna N/A GO:0003735 ... Q9D338 40562754
    987086 9hcc:R (5.67) BS01 rna N/A GO:0003735 ... Q9CQL4 40562754
    987087 9hcc:S (5.67) BS01 rna N/A GO:0003723 ... Q9D1N9 40562754
    987088 9hcc:T (5.67) BS01 rna N/A GO:0003735 ... Q8BU88 40562754
    987089 9hcc:U (5.67) BS01 rna N/A GO:0001650 ... O35972 40562754
    987090 9hcc:V (5.67) BS01 rna N/A GO:0003723 ... Q9CQ06 40562754
    987091 9hcc:X (5.67) BS01 rna N/A GO:0003735 ... Q9D1B9
    Q9DCI9
    40562754
    987092 9hcc:Y (5.67) BS01 rna N/A GO:0003735 ... Q8K2Y7 40562754
    987093 9hcc:Z (5.67) BS01 rna N/A GO:0003674 ... Q9D7N6 40562754
    987094 9hcc:a (5.67) BS01 rna N/A GO:0005739 ... Q9CPV3 40562754
    987095 9hcc:b (5.67) BS01 rna N/A GO:0003735 ... Q5RL20 40562754
    987096 9hcc:c (5.67) BS01 rna N/A GO:0003725 ... Q9CY73 40562754
    987097 9hcc:f (5.67) BS01 rna N/A GO:0003674 ... Q8JZS9 40562754
    987098 9hcc:g (5.67) BS01 rna N/A GO:0003735 ... Q9CQ40 40562754
    987099 9hcc:i (5.67) BS01 rna N/A GO:0003735 ... Q9CPY1 40562754
    987100 9hcc:j (5.67) BS01 rna N/A GO:0003735 ... Q9D0Y8 40562754
    987101 9hcc:k (5.67) BS01 rna N/A GO:0003674 ... Q9D1H8 40562754
    987102 9hcc:l (5.67) BS01 rna N/A GO:0003735 ... Q9CPW3 40562754
    987103 9hcc:o (5.67) BS01 rna N/A GO:0003735 ... Q9CQF8 40562754
    987104 9hcc:q (5.67) BS01 rna N/A GO:0003735 ... Q9CR59 40562754
    987105 9hcc:r (5.67) BS01 rna N/A GO:0003735 ... Q99N85 40562754
    987106 9hcc:r (5.67) BS02 FES N/A GO:0003735 ... Q99N85 40562754
    987107 9hcc:s (5.67) BS01 rna N/A GO:0003735 ... Q9D0G0 40562754
    987108 9hcc:u (5.67) BS01 rna N/A GO:0005739 ... Q9CWV0 40562754
    987109 9hcc:x (5.67) BS01 rna N/A GO:0000451 ... Q5ND52 40562754
    987110 9hcc:y (5.67) BS01 rna N/A GO:0000451 ... Q5ND52 40562754
    987111 9hcc:z (5.67) BS01 rna N/A GO:0003676 ... Q9CWT6 40562754
    987112 9hcd:0 (4.63) BS01 rna N/A GO:0003735 ... Q9DCI9 40562754
    987113 9hcd:0 (4.63) BS02 ZN N/A GO:0003735 ... Q9DCI9 40562754
    987114 9hcd:5 (4.63) BS01 rna N/A GO:0003735 ... Q921S7 40562754
    987115 9hcd:6 (4.63) BS01 rna N/A GO:0003674 ... Q8K2M0 40562754
    987116 9hcd:8 (4.63) BS01 rna N/A GO:0005730 ... Q9Z2Q5 40562754
    987117 9hcd:9 (4.63) BS01 rna N/A GO:0003735 ... Q9CQN7 40562754
    987118 9hcd:D (4.63) BS01 rna N/A GO:0003735 ... Q9D773 40562754
    987119 9hcd:E (4.63) BS01 rna N/A GO:0003735 ... Q99N95 40562754
    987120 9hcd:F (4.63) BS01 rna N/A GO:0003735 ... Q9DCU6 40562754
    987121 9hcd:H (4.63) BS01 rna N/A GO:0003735 ... Q99N94 40562754
    987122 9hcd:I (4.63) BS01 rna N/A GO:0003735 ... Q3TBW2 40562754
    987123 9hcd:I (4.63) BS02 FES N/A GO:0003735 ... Q3TBW2 40562754
    987124 9hcd:J (4.63) BS01 rna N/A GO:0003735 ... Q9CQF0 40562754
    987125 9hcd:K (4.63) BS01 rna N/A GO:0003729 ... Q9D1P0 40562754
    987126 9hcd:L (4.63) BS01 rna N/A GO:0003735 ... Q9D1I6 40562754
    987127 9hcd:M (4.63) BS01 rna N/A GO:0003735 ... Q9CPR5 40562754
    987128 9hcd:N (4.63) BS01 rna N/A GO:0003735 ... Q99N93 40562754
    987129 9hcd:O (4.63) BS01 rna N/A GO:0003735 ... Q9D8P4 40562754
    987130 9hcd:P (4.63) BS01 rna N/A GO:0003735 ... Q9CQL5 40562754
    987131 9hcd:Q (4.63) BS01 rna N/A GO:0003735 ... Q9D338 40562754
    987132 9hcd:R (4.63) BS01 rna N/A GO:0003735 ... Q9CQL4 40562754
    987133 9hcd:S (4.63) BS01 rna N/A GO:0003723 ... Q9D1N9 40562754
    987134 9hcd:T (4.63) BS01 rna N/A GO:0003735 ... Q8BU88 40562754
    987135 9hcd:U (4.63) BS01 rna N/A GO:0001650 ... O35972 40562754
    987136 9hcd:V (4.63) BS01 rna N/A GO:0003723 ... Q9CQ06 40562754
    987137 9hcd:X (4.63) BS01 rna N/A GO:0003735 ... Q9D1B9
    Q9DCI9
    40562754
    987138 9hcd:Y (4.63) BS01 rna N/A GO:0003735 ... Q8K2Y7 40562754
    987139 9hcd:Z (4.63) BS01 rna N/A GO:0003674 ... Q9D7N6 40562754
    987140 9hcd:a (4.63) BS01 rna N/A GO:0005739 ... Q9CPV3 40562754
    987141 9hcd:b (4.63) BS01 rna N/A GO:0003735 ... Q5RL20 40562754
    987142 9hcd:c (4.63) BS01 rna N/A GO:0003725 ... Q9CY73 40562754
    987143 9hcd:e (4.63) BS01 rna N/A GO:0003735 ... Q9EQI8 40562754
    987144 9hcd:f (4.63) BS01 rna N/A GO:0003674 ... Q8JZS9 40562754
    987145 9hcd:g (4.63) BS01 rna N/A GO:0003735 ... Q9CQ40 40562754
    987146 9hcd:i (4.63) BS01 rna N/A GO:0003735 ... Q9CPY1 40562754
    987147 9hcd:j (4.63) BS01 rna N/A GO:0003735 ... Q9D0Y8 40562754
    987148 9hcd:k (4.63) BS01 rna N/A GO:0003674 ... Q9D1H8 40562754
    987149 9hcd:l (4.63) BS01 rna N/A GO:0003735 ... Q9CPW3 40562754
    987150 9hcd:o (4.63) BS01 rna N/A GO:0003735 ... Q9CQF8 40562754
    987151 9hcd:q (4.63) BS01 rna N/A GO:0003735 ... Q9CR59 40562754
    987152 9hcd:r (4.63) BS01 rna N/A GO:0003735 ... Q99N85 40562754
    987153 9hcd:r (4.63) BS02 FES N/A GO:0003735 ... Q99N85 40562754
    987154 9hcd:s (4.63) BS01 rna N/A GO:0003735 ... Q9D0G0 40562754
    987155 9hcd:u (4.63) BS01 rna N/A GO:0005739 ... Q9CWV0 40562754
    987156 9hcd:x (4.63) BS01 rna N/A GO:0000451 ... Q5ND52 40562754
    987157 9hcd:y (4.63) BS01 rna N/A GO:0000451 ... Q5ND52 40562754
    987158 9hcd:z (4.63) BS01 rna N/A GO:0003676 ... Q9CWT6 40562754
    987159 9hce:0 (7.31) BS01 rna N/A GO:0003735 ... Q9DCI9 40562754
    987160 9hce:0 (7.31) BS02 ZN N/A GO:0003735 ... Q9DCI9 40562754
    987161 9hce:1 (7.31) BS01 rna N/A GO:0003735 ... Q9CQP0 40562754
    987162 9hce:5 (7.31) BS01 rna N/A GO:0003735 ... Q921S7 40562754
    987163 9hce:6 (7.31) BS01 rna N/A GO:0003674 ... Q8K2M0 40562754
    987164 9hce:6 (7.31) BS02 rna N/A GO:0003674 ... Q8K2M0 40562754
    987165 9hce:8 (7.31) BS01 rna N/A GO:0005730 ... Q9Z2Q5 40562754
    987166 9hce:9 (7.31) BS01 rna N/A GO:0003735 ... Q9CQN7 40562754
    987167 9hce:D (7.31) BS01 rna N/A GO:0003735 ... Q9D773 40562754
    987168 9hce:E (7.31) BS01 rna N/A GO:0003735 ... Q99N95 40562754
    987169 9hce:F (7.31) BS01 rna N/A GO:0003735 ... Q9DCU6 40562754
    987170 9hce:H (7.31) BS01 rna N/A GO:0003735 ... Q99N94 40562754
    987171 9hce:I (7.31) BS01 rna N/A GO:0003735 ... Q3TBW2 40562754
    987172 9hce:I (7.31) BS02 FES N/A GO:0003735 ... Q3TBW2 40562754
    987173 9hce:J (7.31) BS01 rna N/A GO:0003735 ... Q9CQF0 40562754
    987174 9hce:K (7.31) BS01 rna N/A GO:0003729 ... Q9D1P0 40562754
    987175 9hce:L (7.31) BS01 rna N/A GO:0003735 ... Q9D1I6 40562754
    987176 9hce:M (7.31) BS01 rna N/A GO:0003735 ... Q9CPR5 40562754
    987177 9hce:O (7.31) BS01 rna N/A GO:0003735 ... Q9D8P4 40562754
    987178 9hce:P (7.31) BS01 rna N/A GO:0003735 ... Q9CQL5 40562754
    987179 9hce:P (7.31) BS02 rna N/A GO:0003735 ... Q9CQL5 40562754
    987180 9hce:Q (7.31) BS01 rna N/A GO:0003735 ... Q9D338 40562754
    987181 9hce:R (7.31) BS01 rna N/A GO:0003735 ... Q9CQL4 40562754
    987182 9hce:S (7.31) BS01 rna N/A GO:0003723 ... Q9D1N9 40562754
    987183 9hce:T (7.31) BS01 rna N/A GO:0003735 ... Q8BU88 40562754
    987184 9hce:U (7.31) BS01 rna N/A GO:0001650 ... O35972 40562754
    987185 9hce:V (7.31) BS01 rna N/A GO:0003723 ... Q9CQ06 40562754
    987186 9hce:X (7.31) BS01 rna N/A GO:0003735 ... Q9D1B9
    Q9DCI9
    40562754
    987187 9hce:Y (7.31) BS01 rna N/A GO:0003735 ... Q8K2Y7 40562754
    987188 9hce:Z (7.31) BS01 rna N/A GO:0003674 ... Q9D7N6 40562754
    987189 9hce:a (7.31) BS01 rna N/A GO:0005739 ... Q9CPV3 40562754
    987190 9hce:b (7.31) BS01 rna N/A GO:0003735 ... Q5RL20 40562754
    987191 9hce:c (7.31) BS01 rna N/A GO:0003725 ... Q9CY73 40562754
    987192 9hce:f (7.31) BS01 rna N/A GO:0003674 ... Q8JZS9 40562754
    987193 9hce:g (7.31) BS01 rna N/A GO:0003735 ... Q9CQ40 40562754
    987194 9hce:i (7.31) BS01 rna N/A GO:0003735 ... Q9CPY1 40562754
    987195 9hce:j (7.31) BS01 rna N/A GO:0003735 ... Q9D0Y8 40562754
    987196 9hce:l (7.31) BS01 rna N/A GO:0003735 ... Q9CPW3 40562754
    987197 9hce:o (7.31) BS01 rna N/A GO:0003735 ... Q9CQF8 40562754
    987198 9hce:q (7.31) BS01 rna N/A GO:0003735 ... Q9CR59 40562754
    987199 9hce:r (7.31) BS01 rna N/A GO:0003735 ... Q99N85 40562754
    987200 9hce:r (7.31) BS02 FES N/A GO:0003735 ... Q99N85 40562754

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).