SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    987201 9hce:s (7.31) BS01 rna N/A GO:0003735 ... Q9D0G0 40562754
    987202 9hce:u (7.31) BS01 rna N/A GO:0005739 ... Q9CWV0 40562754
    987203 9hce:x (7.31) BS01 rna N/A GO:0000451 ... Q5ND52 40562754
    987204 9hce:y (7.31) BS01 rna N/A GO:0000451 ... Q5ND52 40562754
    987205 9hcf:0 (2.85) BS01 rna N/A GO:0003735 ... Q9DCI9 40562754
    987206 9hcf:0 (2.85) BS02 ZN N/A GO:0003735 ... Q9DCI9 40562754
    987207 9hcf:1 (2.85) BS01 rna N/A GO:0003735 ... Q9CQP0 40562754
    987208 9hcf:2 (2.85) BS01 rna N/A GO:0003735 ... Q99N91 40562754
    987209 9hcf:3 (2.85) BS01 rna N/A GO:0003674 ... Q9CQL6 40562754
    987210 9hcf:4 (2.85) BS01 rna N/A GO:0003735 ... Q99N90 40562754
    987211 9hcf:4 (2.85) BS02 ZN N/A GO:0003735 ... Q99N90 40562754
    987212 9hcf:5 (2.85) BS01 rna N/A GO:0003735 ... Q921S7 40562754
    987213 9hcf:6 (2.85) BS01 rna N/A GO:0003674 ... Q8K2M0 40562754
    987214 9hcf:6 (2.85) BS02 rna N/A GO:0003674 ... Q8K2M0 40562754
    987215 9hcf:8 (2.85) BS01 rna N/A GO:0005730 ... Q9Z2Q5 40562754
    987216 9hcf:9 (2.85) BS01 rna N/A GO:0003735 ... Q9CQN7 40562754
    987217 9hcf:D (2.85) BS01 rna N/A GO:0003735 ... Q9D773 40562754
    987218 9hcf:E (2.85) BS01 rna N/A GO:0003735 ... Q99N95 40562754
    987219 9hcf:F (2.85) BS01 rna N/A GO:0003735 ... Q9DCU6 40562754
    987220 9hcf:H (2.85) BS01 rna N/A GO:0003735 ... Q99N94 40562754
    987221 9hcf:I (2.85) BS01 rna N/A GO:0003735 ... Q3TBW2 40562754
    987222 9hcf:J (2.85) BS01 rna N/A GO:0003735 ... Q9CQF0 40562754
    987223 9hcf:K (2.85) BS01 rna N/A GO:0003729 ... Q9D1P0 40562754
    987224 9hcf:L (2.85) BS01 rna N/A GO:0003735 ... Q9D1I6 40562754
    987225 9hcf:M (2.85) BS01 rna N/A GO:0003735 ... Q9CPR5 40562754
    987226 9hcf:N (2.85) BS01 rna N/A GO:0003735 ... Q99N93 40562754
    987227 9hcf:O (2.85) BS01 rna N/A GO:0003735 ... Q9D8P4 40562754
    987228 9hcf:O (2.85) BS02 MG N/A GO:0003735 ... Q9D8P4 40562754
    987229 9hcf:P (2.85) BS01 rna N/A GO:0003735 ... Q9CQL5 40562754
    987230 9hcf:P (2.85) BS02 rna N/A GO:0003735 ... Q9CQL5 40562754
    987231 9hcf:Q (2.85) BS01 rna N/A GO:0003735 ... Q9D338 40562754
    987232 9hcf:R (2.85) BS01 rna N/A GO:0003735 ... Q9CQL4 40562754
    987233 9hcf:S (2.85) BS01 rna N/A GO:0003723 ... Q9D1N9 40562754
    987234 9hcf:T (2.85) BS01 rna N/A GO:0003735 ... Q8BU88 40562754
    987235 9hcf:U (2.85) BS01 rna N/A GO:0001650 ... O35972 40562754
    987236 9hcf:V (2.85) BS01 rna N/A GO:0003723 ... Q9CQ06 40562754
    987237 9hcf:W (2.85) BS01 rna N/A GO:0003735 ... Q99N92 40562754
    987238 9hcf:X (2.85) BS01 rna N/A GO:0003735 ... Q9D1B9
    Q9DCI9
    40562754
    987239 9hcf:Y (2.85) BS01 rna N/A GO:0003735 ... Q8K2Y7 40562754
    987240 9hcf:Z (2.85) BS01 rna N/A GO:0003674 ... Q9D7N6 40562754
    987241 9hcf:a (2.85) BS01 rna N/A GO:0005739 ... Q9CPV3 40562754
    987242 9hcf:b (2.85) BS01 rna N/A GO:0003735 ... Q5RL20 40562754
    987243 9hcf:c (2.85) BS01 rna N/A GO:0003725 ... Q9CY73 40562754
    987244 9hcf:d (2.85) BS01 rna N/A GO:0003735 ... Q9D0Q7 40562754
    987245 9hcf:f (2.85) BS01 rna N/A GO:0003674 ... Q8JZS9 40562754
    987246 9hcf:g (2.85) BS01 rna N/A GO:0003735 ... Q9CQ40 40562754
    987247 9hcf:i (2.85) BS01 rna N/A GO:0003735 ... Q9CPY1 40562754
    987248 9hcf:j (2.85) BS01 rna N/A GO:0003735 ... Q9D0Y8 40562754
    987249 9hcf:l (2.85) BS01 rna N/A GO:0003735 ... Q9CPW3 40562754
    987250 9hcf:m (2.85) BS01 rna N/A GO:0003735 ... Q9CZ83 40562754
    987251 9hcf:o (2.85) BS01 rna N/A GO:0003735 ... Q9CQF8 40562754
    987252 9hcf:q (2.85) BS01 rna N/A GO:0003735 ... Q9CR59 40562754
    987253 9hcf:r (2.85) BS01 rna N/A GO:0003735 ... Q99N85 40562754
    987254 9hcf:r (2.85) BS02 FES N/A GO:0003735 ... Q99N85 40562754
    987255 9hcf:s (2.85) BS01 rna N/A GO:0003735 ... Q9D0G0 40562754
    987256 9hcf:t (2.85) BS01 rna N/A GO:0000287 ... Q8K013 40562754
    987257 9hcf:t (2.85) BS02 GNP N/A GO:0000287 ... Q8K013 40562754
    987258 9hcf:u (2.85) BS01 rna N/A GO:0005739 ... Q9CWV0 40562754
    987259 9hcf:x (2.85) BS01 rna N/A GO:0000957 ... Q9CZ57 40562754
    987260 9hcf:y (2.85) BS01 rna N/A GO:0003676 ... Q8BVN4 40562754
    987261 9hcf:z (2.85) BS01 rna N/A GO:0003924 ... Q8R2R6 40562754
    987262 9hcf:z (2.85) BS02 GNP N/A GO:0003924 ... Q8R2R6 40562754
    987263 9hcg:0 (2.91) BS01 rna N/A GO:0003735 ... Q9DCI9 40562754
    987264 9hcg:0 (2.91) BS02 ZN N/A GO:0003735 ... Q9DCI9 40562754
    987265 9hcg:1 (2.91) BS01 rna N/A GO:0003735 ... Q9CQP0 40562754
    987266 9hcg:2 (2.91) BS01 rna N/A GO:0003735 ... Q99N91 40562754
    987267 9hcg:3 (2.91) BS01 rna N/A GO:0003735 ... Q9CQL6 40562754
    987268 9hcg:4 (2.91) BS01 rna N/A GO:0003735 ... Q99N90 40562754
    987269 9hcg:4 (2.91) BS02 ZN N/A GO:0003735 ... Q99N90 40562754
    987270 9hcg:5 (2.91) BS01 rna N/A GO:0003735 ... Q921S7 40562754
    987271 9hcg:6 (2.91) BS01 rna N/A N/A Q8K2M0 40562754
    987272 9hcg:6 (2.91) BS02 rna N/A N/A Q8K2M0 40562754
    987273 9hcg:8 (2.91) BS01 rna N/A GO:0005762 ... Q9Z2Q5 40562754
    987274 9hcg:9 (2.91) BS01 rna N/A GO:0003735 ... Q9CQN7 40562754
    987275 9hcg:D (2.91) BS01 rna N/A GO:0003735 ... Q9D773 40562754
    987276 9hcg:E (2.91) BS01 rna N/A GO:0003735 ... Q99N95 40562754
    987277 9hcg:F (2.91) BS01 rna N/A GO:0003735 ... Q9DCU6 40562754
    987278 9hcg:H (2.91) BS01 rna N/A GO:0003735 ... Q99N94 40562754
    987279 9hcg:I (2.91) BS01 rna N/A GO:0003735 ... Q3TBW2 40562754
    987280 9hcg:J (2.91) BS01 rna N/A GO:0003735 ... Q9CQF0 40562754
    987281 9hcg:K (2.91) BS01 rna N/A GO:0003729 ... Q9D1P0 40562754
    987282 9hcg:L (2.91) BS01 rna N/A GO:0003735 ... Q9D1I6 40562754
    987283 9hcg:M (2.91) BS01 rna N/A GO:0003735 ... Q9CPR5 40562754
    987284 9hcg:N (2.91) BS01 rna N/A GO:0003735 ... Q99N93 40562754
    987285 9hcg:O (2.91) BS01 rna N/A GO:0003735 ... Q9D8P4 40562754
    987286 9hcg:P (2.91) BS01 rna N/A GO:0003735 ... Q9CQL5 40562754
    987287 9hcg:P (2.91) BS02 rna N/A GO:0003735 ... Q9CQL5 40562754
    987288 9hcg:Q (2.91) BS01 rna N/A GO:0003735 ... Q9D338 40562754
    987289 9hcg:R (2.91) BS01 rna N/A GO:0003735 ... Q9CQL4 40562754
    987290 9hcg:S (2.91) BS01 rna N/A GO:0003723 ... Q9D1N9 40562754
    987291 9hcg:T (2.91) BS01 rna N/A GO:0003735 ... Q8BU88 40562754
    987292 9hcg:U (2.91) BS01 rna N/A GO:0001650 ... O35972 40562754
    987293 9hcg:V (2.91) BS01 rna N/A GO:0003723 ... Q9CQ06 40562754
    987294 9hcg:W (2.91) BS01 rna N/A GO:0003735 ... Q99N92 40562754
    987295 9hcg:X (2.91) BS01 rna N/A GO:0003735 ... Q9D1B9 40562754
    987296 9hcg:Y (2.91) BS01 rna N/A GO:0003735 ... Q8K2Y7 40562754
    987297 9hcg:Z (2.91) BS01 rna N/A GO:0003735 ... Q9D7N6 40562754
    987298 9hcg:a (2.91) BS01 rna N/A GO:0005739 ... Q9CPV3 40562754
    987299 9hcg:b (2.91) BS01 rna N/A GO:0003735 ... Q5RL20 40562754
    987300 9hcg:c (2.91) BS01 rna N/A GO:0003725 ... Q9CY73 40562754
    987301 9hcg:d (2.91) BS01 rna N/A GO:0003735 ... Q9D0Q7 40562754
    987302 9hcg:e (2.91) BS01 rna N/A GO:0003735 ... Q9EQI8 40562754
    987303 9hcg:f (2.91) BS01 rna N/A GO:0005761 ... Q8JZS9 40562754
    987304 9hcg:g (2.91) BS01 rna N/A GO:0003735 ... Q9CQ40 40562754
    987305 9hcg:i (2.91) BS01 rna N/A GO:0003735 ... Q9CPY1 40562754
    987306 9hcg:j (2.91) BS01 rna N/A GO:0003735 ... Q9D0Y8 40562754
    987307 9hcg:k (2.91) BS01 rna N/A GO:0003674 ... Q9D1H8 40562754
    987308 9hcg:l (2.91) BS01 rna N/A GO:0003735 ... Q9CPW3 40562754
    987309 9hcg:m (2.91) BS01 rna N/A GO:0003735 ... Q9CZ83 40562754
    987310 9hcg:o (2.91) BS01 rna N/A GO:0005761 ... Q9CQF8 40562754
    987311 9hcg:q (2.91) BS01 rna N/A GO:0005634 ... Q9CR59 40562754
    987312 9hcg:r (2.91) BS01 rna N/A GO:0003735 ... Q99N85 40562754
    987313 9hcg:r (2.91) BS02 FES N/A GO:0003735 ... Q99N85 40562754
    987314 9hcg:s (2.91) BS01 rna N/A GO:0003735 ... Q9D0G0 40562754
    987315 9hcg:t (2.91) BS01 rna N/A GO:0000027 ... Q9CPY0 40562754
    987316 9hcg:t (2.91) BS02 SAH N/A GO:0000027 ... Q9CPY0 40562754
    987317 9hcg:u (2.91) BS01 rna N/A N/A Q9CWV0 40562754
    987318 9hcg:x (2.91) BS01 rna N/A GO:0000957 ... Q9CZ57 40562754
    987319 9hcg:y (2.91) BS01 rna N/A GO:0003676 ... Q8BVN4 40562754
    987320 9hcg:z (2.91) BS01 rna N/A GO:0003924 ... Q8R2R6 40562754
    987321 9hch:0 (2.85) BS01 rna N/A GO:0003735 ... Q9DCI9 40562754
    987322 9hch:0 (2.85) BS02 ZN N/A GO:0003735 ... Q9DCI9 40562754
    987323 9hch:1 (2.85) BS01 rna N/A GO:0003735 ... Q9CQP0 40562754
    987324 9hch:2 (2.85) BS01 rna N/A GO:0003735 ... Q99N91 40562754
    987325 9hch:3 (2.85) BS01 rna N/A GO:0003674 ... Q9CQL6 40562754
    987326 9hch:4 (2.85) BS01 rna N/A GO:0003735 ... Q99N90 40562754
    987327 9hch:4 (2.85) BS02 ZN N/A GO:0003735 ... Q99N90 40562754
    987328 9hch:5 (2.85) BS01 rna N/A GO:0003735 ... Q921S7 40562754
    987329 9hch:6 (2.85) BS01 rna N/A GO:0003674 ... Q8K2M0 40562754
    987330 9hch:6 (2.85) BS02 rna N/A GO:0003674 ... Q8K2M0 40562754
    987331 9hch:8 (2.85) BS01 rna N/A GO:0005730 ... Q9Z2Q5 40562754
    987332 9hch:9 (2.85) BS01 rna N/A GO:0003735 ... Q9CQN7 40562754
    987333 9hch:D (2.85) BS01 rna N/A GO:0003735 ... Q9D773 40562754
    987334 9hch:E (2.85) BS01 rna N/A GO:0003735 ... Q99N95 40562754
    987335 9hch:E (2.85) BS02 MG N/A GO:0003735 ... Q99N95 40562754
    987336 9hch:F (2.85) BS01 rna N/A GO:0003735 ... Q9DCU6 40562754
    987337 9hch:H (2.85) BS01 rna N/A GO:0003735 ... Q99N94 40562754
    987338 9hch:I (2.85) BS01 rna N/A GO:0003735 ... Q3TBW2 40562754
    987339 9hch:I (2.85) BS02 FES N/A GO:0003735 ... Q3TBW2 40562754
    987340 9hch:J (2.85) BS01 rna N/A GO:0003735 ... Q9CQF0 40562754
    987341 9hch:K (2.85) BS01 rna N/A GO:0003729 ... Q9D1P0 40562754
    987342 9hch:L (2.85) BS01 rna N/A GO:0003735 ... Q9D1I6 40562754
    987343 9hch:M (2.85) BS01 rna N/A GO:0003735 ... Q9CPR5 40562754
    987344 9hch:N (2.85) BS01 rna N/A GO:0003735 ... Q99N93 40562754
    987345 9hch:O (2.85) BS01 rna N/A GO:0003735 ... Q9D8P4 40562754
    987346 9hch:P (2.85) BS01 rna N/A GO:0003735 ... Q9CQL5 40562754
    987347 9hch:P (2.85) BS02 rna N/A GO:0003735 ... Q9CQL5 40562754
    987348 9hch:Q (2.85) BS01 rna N/A GO:0003735 ... Q9D338 40562754
    987349 9hch:R (2.85) BS01 rna N/A GO:0003735 ... Q9CQL4 40562754
    987350 9hch:S (2.85) BS01 rna N/A GO:0003723 ... Q9D1N9 40562754
    987351 9hch:T (2.85) BS01 rna N/A GO:0003735 ... Q8BU88 40562754
    987352 9hch:U (2.85) BS01 rna N/A GO:0001650 ... O35972 40562754
    987353 9hch:V (2.85) BS01 rna N/A GO:0003723 ... Q9CQ06 40562754
    987354 9hch:W (2.85) BS01 rna N/A GO:0003735 ... Q99N92 40562754
    987355 9hch:X (2.85) BS01 rna N/A GO:0003735 ... Q9D1B9
    Q9DCI9
    40562754
    987356 9hch:Y (2.85) BS01 rna N/A GO:0003735 ... Q8K2Y7 40562754
    987357 9hch:Z (2.85) BS01 rna N/A GO:0003674 ... Q9D7N6 40562754
    987358 9hch:a (2.85) BS01 rna N/A GO:0005739 ... Q9CPV3 40562754
    987359 9hch:b (2.85) BS01 rna N/A GO:0003735 ... Q5RL20 40562754
    987360 9hch:c (2.85) BS01 rna N/A GO:0003725 ... Q9CY73 40562754
    987361 9hch:d (2.85) BS01 rna N/A GO:0003735 ... Q9D0Q7 40562754
    987362 9hch:f (2.85) BS01 rna N/A GO:0003674 ... Q8JZS9 40562754
    987363 9hch:g (2.85) BS01 rna N/A GO:0003735 ... Q9CQ40 40562754
    987364 9hch:i (2.85) BS01 rna N/A GO:0003735 ... Q9CPY1 40562754
    987365 9hch:j (2.85) BS01 rna N/A GO:0003735 ... Q9D0Y8 40562754
    987366 9hch:k (2.85) BS01 rna N/A GO:0003674 ... Q9D1H8 40562754
    987367 9hch:l (2.85) BS01 rna N/A GO:0003735 ... Q9CPW3 40562754
    987368 9hch:m (2.85) BS01 rna N/A GO:0003735 ... Q9CZ83 40562754
    987369 9hch:o (2.85) BS01 rna N/A GO:0003735 ... Q9CQF8 40562754
    987370 9hch:q (2.85) BS01 rna N/A GO:0003735 ... Q9CR59 40562754
    987371 9hch:r (2.85) BS01 rna N/A GO:0003735 ... Q99N85 40562754
    987372 9hch:r (2.85) BS02 FES N/A GO:0003735 ... Q99N85 40562754
    987373 9hch:s (2.85) BS01 rna N/A GO:0003735 ... Q9D0G0 40562754
    987374 9hch:u (2.85) BS01 rna N/A GO:0005739 ... Q9CWV0 40562754
    987375 9hch:x (2.85) BS01 rna N/A GO:0000957 ... Q9CZ57 40562754
    987376 9hch:y (2.85) BS01 rna N/A GO:0003676 ... Q8BVN4 40562754
    987377 9hch:z (2.85) BS01 rna N/A GO:0003924 ... Q8R2R6 40562754
    987378 9hch:z (2.85) BS02 GNP N/A GO:0003924 ... Q8R2R6 40562754
    987379 9hcj:A1 (30.0) BS01 peptide N/A GO:0000922 ... Q55GW5 39729993
    987380 9hcj:D0 (30.0) BS01 peptide N/A GO:0000972 ... Q54F20 39729993
    987381 9hcj:D1 (30.0) BS01 peptide N/A GO:0000972 ... Q54F20 39729993
    987382 9hcj:D2 (30.0) BS01 peptide N/A GO:0000972 ... Q54F20 39729993
    987383 9hcj:D3 (30.0) BS01 peptide N/A GO:0000972 ... Q54F20 39729993
    987384 9hcl:A (1.87) BS01 TWC N/A N/A P54274 41266376
    987385 9hcl:A (1.87) BS02 TWC N/A N/A P54274 41266376
    987386 9hcl:A (1.87) BS03 TWC N/A N/A P54274 41266376
    987387 9hcm:A (2.32) BS01 LX7 N/A N/A P54274 41266376
    987388 9hcn:A (1.93) BS01 UVA N/A N/A P54274 41266376
    987389 9hco:A (2.78) BS01 YG7 N/A GO:0001666 ... P31645 N/A
    987390 9hcp:A (1.7) BS01 LL0 N/A N/A P54274 41266376
    987391 9hcq:A (1.96) BS01 JHJ N/A N/A P54274 41266376
    987392 9hcr:A (1.931) BS01 W1P N/A N/A P54274 41266376
    987393 9hcs:A (2.2) BS01 JGA N/A N/A P54274 41266376
    987394 9hct:A (1.7) BS01 B0V N/A N/A P54274 41266376
    987395 9hcu:A (2.07) BS01 ZU7 N/A N/A P54274 41266376
    987396 9hcv:A (2.08) BS01 A1ITZ N/A N/A P54274 41266376
    987397 9hcw:A (2.08) BS01 A1IT0 N/A N/A P54274 41266376
    987398 9hcx:A (1.69) BS01 W0S N/A N/A P54274 41266376
    987399 9hcy:A (1.93) BS01 A9E N/A N/A P54274 41266376
    987400 9hcz:A (1.55) BS01 TT3 N/A N/A P54274 41266376

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).