SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    988201 9hej:B (2.82) BS01 CA N/A GO:0016020 ... Q86VB7 40681524
    988202 9hej:B (2.82) BS02 CA N/A GO:0016020 ... Q86VB7 40681524
    988203 9hej:B (2.82) BS03 CA N/A GO:0016020 ... Q86VB7 40681524
    988204 9hej:D (2.82) BS01 HEM N/A GO:0004601 ... P69905 40681524
    988205 9hej:D (2.82) BS02 OXY N/A GO:0004601 ... P69905 40681524
    988206 9hej:E (2.82) BS01 HEM N/A GO:0004601 ... P68871 40681524
    988207 9hej:E (2.82) BS02 OXY N/A GO:0004601 ... P68871 40681524
    988208 9hej:F (2.82) BS01 peptide N/A GO:0004252 ... P00738 40681524
    988209 9hek:A (3.15) BS01 CA N/A GO:0016020 ... Q86VB7 40681524
    988210 9hek:A (3.15) BS02 CA N/A GO:0016020 ... Q86VB7 40681524
    988211 9hek:A (3.15) BS03 CA N/A GO:0016020 ... Q86VB7 40681524
    988212 9hek:A (3.15) BS04 CA N/A GO:0016020 ... Q86VB7 40681524
    988213 9hek:A (3.15) BS05 CA N/A GO:0016020 ... Q86VB7 40681524
    988214 9hek:A (3.15) BS06 CA N/A GO:0016020 ... Q86VB7 40681524
    988215 9hek:A (3.15) BS07 CA N/A GO:0016020 ... Q86VB7 40681524
    988216 9hek:A (3.15) BS08 CA N/A GO:0016020 ... Q86VB7 40681524
    988217 9hek:A (3.15) BS09 CA N/A GO:0016020 ... Q86VB7 40681524
    988218 9hek:B (3.15) BS01 CA N/A GO:0016020 ... Q86VB7 40681524
    988219 9hek:B (3.15) BS02 CA N/A GO:0016020 ... Q86VB7 40681524
    988220 9hek:B (3.15) BS03 CA N/A GO:0016020 ... Q86VB7 40681524
    988221 9hek:B (3.15) BS04 CA N/A GO:0016020 ... Q86VB7 40681524
    988222 9hek:B (3.15) BS05 HEM N/A GO:0016020 ... Q86VB7 40681524
    988223 9hek:C (3.15) BS01 CA N/A GO:0016020 ... Q86VB7 40681524
    988224 9hek:C (3.15) BS02 CA N/A GO:0016020 ... Q86VB7 40681524
    988225 9hek:C (3.15) BS03 CA N/A GO:0016020 ... Q86VB7 40681524
    988226 9hek:C (3.15) BS04 CA N/A GO:0016020 ... Q86VB7 40681524
    988227 9hek:C (3.15) BS05 CA N/A GO:0016020 ... Q86VB7 40681524
    988228 9hek:D (3.15) BS01 HEM N/A GO:0004601 ... P69905 40681524
    988229 9hek:D (3.15) BS02 OXY N/A GO:0004601 ... P69905 40681524
    988230 9hek:E (3.15) BS01 HEM N/A GO:0004601 ... P68871 40681524
    988231 9hek:E (3.15) BS02 OXY N/A GO:0004601 ... P68871 40681524
    988232 9hel:A (3.1) BS01 CA N/A GO:0016020 ... Q86VB7 40681524
    988233 9hel:A (3.1) BS02 CA N/A GO:0016020 ... Q86VB7 40681524
    988234 9hel:A (3.1) BS03 CA N/A GO:0016020 ... Q86VB7 40681524
    988235 9hel:B (3.1) BS01 CA N/A GO:0016020 ... Q86VB7 40681524
    988236 9hel:B (3.1) BS02 CA N/A GO:0016020 ... Q86VB7 40681524
    988237 9hel:B (3.1) BS03 CA N/A GO:0016020 ... Q86VB7 40681524
    988238 9hel:B (3.1) BS04 CA N/A GO:0016020 ... Q86VB7 40681524
    988239 9hem:A (2.6) BS01 FES N/A GO:0003954 ... O66842 41265450
    988240 9hem:B (2.6) BS01 SF4 N/A GO:0008137 ... O66841 41265450
    988241 9hem:B (2.6) BS02 FMN N/A GO:0008137 ... O66841 41265450
    988242 9hem:B (2.6) BS03 NAD N/A GO:0008137 ... O66841 41265450
    988243 9hem:C (2.6) BS01 FES N/A GO:0003954 ... O66842 41265450
    988244 9hem:D (2.6) BS01 FMN N/A GO:0008137 ... O66841 41265450
    988245 9hem:D (2.6) BS02 NAD N/A GO:0008137 ... O66841 41265450
    988246 9hem:D (2.6) BS03 SF4 N/A GO:0008137 ... O66841 41265450
    988247 9hen:A (2.27) BS01 FES N/A GO:0003954 ... O66842 41265450
    988248 9hen:B (2.27) BS01 SF4 N/A GO:0008137 ... O66841 41265450
    988249 9hen:B (2.27) BS02 FMN N/A GO:0008137 ... O66841 41265450
    988250 9hen:B (2.27) BS03 NAD N/A GO:0008137 ... O66841 41265450
    988251 9hen:C (2.27) BS01 FES N/A GO:0003954 ... O66842 41265450
    988252 9hen:D (2.27) BS01 SF4 N/A GO:0008137 ... O66841 41265450
    988253 9hen:D (2.27) BS02 FMN N/A GO:0008137 ... O66841 41265450
    988254 9hen:D (2.27) BS03 NAD N/A GO:0008137 ... O66841 41265450
    988255 9hen:D (2.27) BS04 BU3 N/A GO:0008137 ... O66841 41265450
    988256 9hen:D (2.27) BS05 BU3 N/A GO:0008137 ... O66841 41265450
    988257 9heo:A (3.4) BS01 ZN N/A GO:0003151 ... P11716 N/A
    988258 9heo:A (3.4) BS02 ATP N/A GO:0003151 ... P11716 N/A
    988259 9heo:A (3.4) BS03 CFF N/A GO:0003151 ... P11716 N/A
    988260 9heo:A (3.4) BS04 CA N/A GO:0003151 ... P11716 N/A
    988261 9heo:C (3.4) BS01 ZN N/A GO:0003151 ... P11716 N/A
    988262 9heo:C (3.4) BS02 ATP N/A GO:0003151 ... P11716 N/A
    988263 9heo:C (3.4) BS03 CFF N/A GO:0003151 ... P11716 N/A
    988264 9heo:C (3.4) BS04 CA N/A GO:0003151 ... P11716 N/A
    988265 9heo:G (3.4) BS01 ZN N/A GO:0003151 ... P11716 N/A
    988266 9heo:G (3.4) BS02 ATP N/A GO:0003151 ... P11716 N/A
    988267 9heo:G (3.4) BS03 CFF N/A GO:0003151 ... P11716 N/A
    988268 9heo:G (3.4) BS04 CA N/A GO:0003151 ... P11716 N/A
    988269 9heo:J (3.4) BS01 ZN N/A GO:0003151 ... P11716 N/A
    988270 9heo:J (3.4) BS02 ATP N/A GO:0003151 ... P11716 N/A
    988271 9heo:J (3.4) BS03 CFF N/A GO:0003151 ... P11716 N/A
    988272 9heo:J (3.4) BS04 CA N/A GO:0003151 ... P11716 N/A
    988273 9heq:A (3.6) BS01 ATP N/A GO:0003151 ... P11716 N/A
    988274 9heq:A (3.6) BS02 CFF N/A GO:0003151 ... P11716 N/A
    988275 9heq:A (3.6) BS03 CA N/A GO:0003151 ... P11716 N/A
    988276 9heq:A (3.6) BS04 ZN N/A GO:0003151 ... P11716 N/A
    988277 9heq:C (3.6) BS01 ATP N/A GO:0003151 ... P11716 N/A
    988278 9heq:C (3.6) BS02 CFF N/A GO:0003151 ... P11716 N/A
    988279 9heq:C (3.6) BS03 CA N/A GO:0003151 ... P11716 N/A
    988280 9heq:C (3.6) BS04 ZN N/A GO:0003151 ... P11716 N/A
    988281 9heq:G (3.6) BS01 ATP N/A GO:0003151 ... P11716 N/A
    988282 9heq:G (3.6) BS02 CFF N/A GO:0003151 ... P11716 N/A
    988283 9heq:G (3.6) BS03 CA N/A GO:0003151 ... P11716 N/A
    988284 9heq:G (3.6) BS04 ZN N/A GO:0003151 ... P11716 N/A
    988285 9heq:J (3.6) BS01 ATP N/A GO:0003151 ... P11716 N/A
    988286 9heq:J (3.6) BS02 CFF N/A GO:0003151 ... P11716 N/A
    988287 9heq:J (3.6) BS03 CA N/A GO:0003151 ... P11716 N/A
    988288 9heq:J (3.6) BS04 ZN N/A GO:0003151 ... P11716 N/A
    988289 9hes:AA (2.25) BS01 rna N/A GO:0000325 ... Q9SIP7 41678627
    988290 9hes:AB (2.25) BS01 rna N/A GO:0003729 ... Q9FLF0 41678627
    988291 9hes:AC (2.25) BS01 rna N/A GO:0003729 ... Q93VB8 41678627
    988292 9hes:AD (2.25) BS01 rna N/A GO:0000325 ... P51427 41678627
    988293 9hes:AE (2.25) BS01 rna N/A GO:0000325 ... P42798 41678627
    988294 9hes:AF (2.25) BS01 rna N/A GO:0000462 ... Q9SK22 41678627
    988295 9hes:AG (2.25) BS01 rna N/A GO:0000325 ... P41127 41678627
    988296 9hes:AG (2.25) BS02 rna N/A GO:0000325 ... P41127 41678627
    988297 9hes:AH (2.25) BS01 rna N/A GO:0000325 ... Q9T043 41678627
    988298 9hes:AI (2.25) BS01 rna N/A GO:0003723 ... Q9SW09 41678627
    988299 9hes:AJ (2.25) BS01 rna N/A GO:0002181 ... Q940B0 41678627
    988300 9hes:AK (2.25) BS01 rna N/A GO:0003723 ... Q9SRX2 41678627
    988301 9hes:AK (2.25) BS02 rna N/A GO:0003723 ... Q9SRX2 41678627
    988302 9hes:AL (2.25) BS01 rna N/A GO:0003735 ... A0A1P8AY36 41678627
    988303 9hes:AL (2.25) BS02 rna N/A GO:0003735 ... A0A1P8AY36 41678627
    988304 9hes:AM (2.25) BS01 rna N/A GO:0003674 ... Q43291 41678627
    988305 9hes:AM (2.25) BS02 rna N/A GO:0003674 ... Q43291 41678627
    988306 9hes:AN (2.25) BS01 rna N/A GO:0002181 ... Q9M9W1 41678627
    988307 9hes:AO (2.25) BS01 rna N/A GO:0002181 ... Q42347 41678627
    988308 9hes:AP (2.25) BS01 rna N/A GO:0003729 ... P51419 41678627
    988309 9hes:AQ (2.25) BS01 rna N/A GO:0003729 ... O82204 41678627
    988310 9hes:AR (2.25) BS01 rna N/A N/A F4JC32 41678627
    988311 9hes:AT (2.25) BS01 rna N/A GO:0003723 ... Q8VZ19 41678627
    988312 9hes:AU (2.25) BS01 rna N/A GO:0002181 ... Q9STR1 41678627
    988313 9hes:AV (2.25) BS01 rna N/A GO:0003729 ... P49211 41678627
    988314 9hes:AW (2.25) BS01 rna N/A GO:0002181 ... Q9C912 41678627
    988315 9hes:AX (2.25) BS01 rna N/A GO:0000325 ... Q9M352 41678627
    988316 9hes:AY (2.25) BS01 rna N/A GO:0000448 ... Q8LFH7 41678627
    988317 9hes:AY (2.25) BS02 rna N/A GO:0000448 ... Q8LFH7 41678627
    988318 9hes:AY (2.25) BS03 ZN N/A GO:0000448 ... Q8LFH7 41678627
    988319 9hes:AZ (2.25) BS01 rna N/A GO:0002181 ... O22860 41678627
    988320 9hes:Aa (2.25) BS01 rna N/A GO:0002181 ... Q93VG5 41678627
    988321 9hes:BA (2.25) BS01 rna N/A GO:0002181 ... P51424 41678627
    988322 9hes:BA (2.25) BS02 rna N/A GO:0002181 ... P51424 41678627
    988323 9hes:BB (2.25) BS01 rna N/A GO:0003729 ... Q9LZ17 41678627
    988324 9hes:BD (2.25) BS01 rna N/A GO:0002181 ... O23290 41678627
    988325 9hes:BD (2.25) BS02 rna N/A GO:0002181 ... O23290 41678627
    988326 9hes:BD (2.25) BS03 ZN N/A GO:0002181 ... O23290 41678627
    988327 9hes:BE (2.25) BS01 rna N/A GO:0003674 ... Q8RXU5 41678627
    988328 9hes:BE (2.25) BS02 ZN N/A GO:0003674 ... Q8RXU5 41678627
    988329 9hes:BF (2.25) BS01 rna N/A GO:0002181 ... Q9C9C6 41678627
    988330 9hes:BG (2.25) BS01 rna N/A GO:0000325 ... Q9LZH9 41678627
    988331 9hes:BG (2.25) BS02 rna N/A GO:0000325 ... Q9LZH9 41678627
    988332 9hes:BH (2.25) BS01 rna N/A GO:0003729 ... Q9LRX8 41678627
    988333 9hes:BI (2.25) BS01 rna N/A GO:0003729 ... P49690 41678627
    988334 9hes:BJ (2.25) BS01 rna N/A GO:0003735 ... Q08770 41678627
    988335 9hes:BJ (2.25) BS02 rna N/A GO:0003735 ... Q08770 41678627
    988336 9hes:BJ (2.25) BS03 rna N/A GO:0003735 ... Q08770 41678627
    988337 9hes:BK (2.25) BS01 rna N/A GO:0000027 ... Q8LBI1 41678627
    988338 9hes:BK (2.25) BS02 rna N/A GO:0000027 ... Q8LBI1 41678627
    988339 9hes:BL (2.25) BS01 rna N/A GO:0000325 ... Q9FNP8 41678627
    988340 9hes:BM (2.25) BS01 rna N/A GO:0000325 ... Q93VI3 41678627
    988341 9hes:BM (2.25) BS02 rna N/A GO:0000325 ... Q93VI3 41678627
    988342 9hes:BM (2.25) BS03 TER N/A GO:0000325 ... Q93VI3 41678627
    988343 9hes:BN (2.25) BS01 rna N/A GO:0003729 ... Q9M3C3 41678627
    988344 9hes:BN (2.25) BS02 rna N/A GO:0003729 ... Q9M3C3 41678627
    988345 9hes:BO (2.25) BS01 rna N/A GO:0000325 ... P51414 41678627
    988346 9hes:BO (2.25) BS02 rna N/A GO:0000325 ... P51414 41678627
    988347 9hes:BP (2.25) BS01 rna N/A GO:0000463 ... Q9M3D2 41678627
    988348 9hes:BP (2.25) BS02 rna N/A GO:0000463 ... Q9M3D2 41678627
    988349 9hes:BQ (2.25) BS01 rna N/A GO:0000325 ... P46286 41678627
    988350 9hes:BR (2.25) BS01 rna N/A GO:0003735 ... F4IT48 41678627
    988351 9hes:BR (2.25) BS02 rna N/A GO:0003735 ... F4IT48 41678627
    988352 9hes:BR (2.25) BS03 MG N/A GO:0003735 ... F4IT48 41678627
    988353 9hes:BS (2.25) BS01 rna N/A GO:0000325 ... P17094 41678627
    988354 9hes:BT (2.25) BS01 rna N/A GO:0003723 ... Q9SF40 41678627
    988355 9hes:BT (2.25) BS02 rna N/A GO:0003723 ... Q9SF40 41678627
    988356 9hes:BT (2.25) BS03 TER N/A GO:0003723 ... Q9SF40 41678627
    988357 9hes:BU (2.25) BS01 rna N/A GO:0003723 ... P42795 41678627
    988358 9hes:BU (2.25) BS02 rna N/A GO:0003723 ... P42795 41678627
    988359 9hes:BV (2.25) BS01 rna N/A GO:0003729 ... Q42262 41678627
    988360 9hes:BW (2.25) BS01 rna N/A GO:0000447 ... Q3E902 41678627
    988361 9hes:Ba (2.25) BS01 rna N/A GO:0003729 ... Q9STY6 41678627
    988362 9hes:Ca (2.25) BS01 rna N/A GO:0002181 ... Q680P8 41678627
    988363 9hes:Ca (2.25) BS02 ZN N/A GO:0002181 ... Q680P8 41678627
    988364 9hes:Da (2.25) BS01 rna N/A GO:0000462 ... P59224 41678627
    988365 9hes:Da (2.25) BS02 rna N/A GO:0000462 ... P59224 41678627
    988366 9hes:Ea (2.25) BS01 rna N/A GO:0000325 ... O23515 41678627
    988367 9hes:Ea (2.25) BS02 rna N/A GO:0000325 ... O23515 41678627
    988368 9hes:Fa (2.25) BS01 rna N/A GO:0003729 ... Q42351 41678627
    988369 9hes:Ga (2.25) BS01 rna N/A GO:0003729 ... B9DHA6 41678627
    988370 9hes:Ga (2.25) BS02 ZN N/A GO:0003729 ... B9DHA6 41678627
    988371 9hes:Ha (2.25) BS01 rna N/A GO:0003729 ... P49637 41678627
    988372 9hes:Ia (2.25) BS01 rna N/A GO:0000325 ... P49209 41678627
    988373 9hes:Ja (2.25) BS01 rna N/A GO:0003735 ... Q8VYK6 41678627
    988374 9hes:Ka (2.25) BS01 rna N/A GO:0002181 ... Q8LC83 41678627
    988375 9hes:La (2.25) BS01 rna N/A GO:0003729 ... Q9T029 41678627
    988376 9hes:Ma (2.25) BS01 rna N/A GO:0003729 ... P49206 41678627
    988377 9hes:Ma (2.25) BS02 ZN N/A GO:0003729 ... P49206 41678627
    988378 9hes:Na (2.25) BS01 rna N/A GO:0003729 ... Q9M2F1 41678627
    988379 9hes:Oa (2.25) BS01 rna N/A GO:0000028 ... P34789 41678627
    988380 9hes:Pa (2.25) BS01 rna N/A GO:0003729 ... P49689 41678627
    988381 9hes:Ra (2.25) BS01 rna N/A GO:0003729 ... Q8LD03 41678627
    988382 9hes:Ta (2.25) BS01 rna N/A GO:0003729 ... P51430 41678627
    988383 9hes:Ua (2.25) BS01 rna N/A GO:0000028 ... Q9CAX6 41678627
    988384 9hes:Va (2.25) BS01 rna N/A GO:0003729 ... P49201 41678627
    988385 9hes:Wa (2.25) BS01 rna N/A GO:0000325 ... P34788 41678627
    988386 9hes:Wa (2.25) BS02 MG N/A GO:0000325 ... P34788 41678627
    988387 9hes:Xa (2.25) BS01 rna N/A GO:0003729 ... P16181 41678627
    988388 9hes:Xa (2.25) BS02 TER N/A GO:0003729 ... P16181 41678627
    988389 9hes:Ya (2.25) BS01 rna N/A GO:0003735 ... Q9FY65 41678627
    988390 9hes:Ya (2.25) BS02 rna N/A GO:0003735 ... Q9FY65 41678627
    988391 9hes:Za (2.25) BS01 rna N/A GO:0000028 ... Q08682 41678627
    988392 9heu:A (3.6) BS01 ATP N/A GO:0000502 ... P35998 41719407
    988393 9heu:B (3.6) BS01 ADP N/A GO:0000502 ... P62191 41719407
    988394 9heu:C (3.6) BS01 ADP N/A GO:0000502 ... P62195 41719407
    988395 9heu:D (3.6) BS01 ADP N/A GO:0000502 ... P43686 41719407
    988396 9heu:E (3.6) BS01 ADP N/A GO:0005634 ... A0A087X2I1 41719407
    988397 9heu:F (3.6) BS01 ADP N/A GO:0000502 ... P17980 41719407
    988398 9hf3:A (2.45) BS01 Y01 N/A GO:0001819 ... Q9JIP4 N/A
    988399 9hf3:B (2.45) BS01 Y01 N/A GO:0001819 ... Q9JIP4 N/A
    988400 9hf3:C (2.45) BS01 Y01 N/A GO:0001819 ... Q9JIP4 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).