SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    988801 9hgh:A (1.9) BS01 peptide N/A N/A D6RDG8 40178506
    988802 9hgi:A (2.77) BS01 dna N/A GO:0000166 ... D3YPE9 41125242
    988803 9hgi:A (2.77) BS02 dna N/A GO:0000166 ... D3YPE9 41125242
    988804 9hgj:A (3.53) BS01 dna N/A GO:0000166 ... D3YPE9 41125242
    988805 9hgj:A (3.53) BS02 dna N/A GO:0000166 ... D3YPE9 41125242
    988806 9hgj:A (3.53) BS03 AGS N/A GO:0000166 ... D3YPE9 41125242
    988807 9hgj:A (3.53) BS04 MG N/A GO:0000166 ... D3YPE9 41125242
    988808 9hgj:B (3.53) BS01 AGS N/A GO:0000166 ... D3YPE9 41125242
    988809 9hgm:A (2.6) BS01 A1IUL N/A GO:0008168 ... O14717 40894903
    988810 9hgm:A (2.6) BS02 A1IUL N/A GO:0008168 ... O14717 40894903
    988811 9hgm:B (2.6) BS01 A1IUL N/A GO:0008168 ... O14717 40894903
    988812 9hgm:B (2.6) BS02 A1IUL N/A GO:0008168 ... O14717 40894903
    988813 9hgp:A (2.05) BS01 peptide N/A GO:0004064 ... P00918 40510324
    988814 9hgp:A (2.05) BS02 ZN N/A GO:0004064 ... P00918 40510324
    988815 9hgq:A (1.9) BS01 MIC N/A GO:0000287 ... Q83DG5 40250561
    988816 9hgq:B (1.9) BS01 MIC N/A GO:0000287 ... Q83DG5 40250561
    988817 9hgu:A (2.3) BS01 CA N/A N/A P16581 N/A
    988818 9hgu:A (2.3) BS02 A1IUQ N/A N/A P16581 N/A
    988819 9hgv:A (2.46) BS01 A1IUR N/A N/A P16581 N/A
    988820 9hgv:A (2.46) BS02 CA N/A N/A P16581 N/A
    988821 9hgv:A (2.46) BS03 CA N/A N/A P16581 N/A
    988822 9hgw:A (2.2) BS01 A1IUS N/A N/A P16581 N/A
    988823 9hgw:A (2.2) BS02 CA N/A N/A P16581 N/A
    988824 9hgx:A (2.75) BS01 A1IUT N/A N/A P16581 N/A
    988825 9hgx:A (2.75) BS02 CA N/A N/A P16581 N/A
    988826 9hgy:A (2.5) BS01 A1IUU N/A N/A P16581 N/A
    988827 9hgy:A (2.5) BS02 CA N/A N/A P16581 N/A
    988828 9hh0:A (2.66) BS01 GB N/A GO:0004104 ... A0A4X1VEU5 41556466
    988829 9hh0:B (2.66) BS01 GB N/A GO:0004104 ... A0A4X1VEU5 41556466
    988830 9hh0:C (2.66) BS01 GB N/A GO:0004104 ... A0A4X1VEU5 41556466
    988831 9hh0:D (2.66) BS01 GB N/A GO:0004104 ... A0A4X1VEU5 41556466
    988832 9hh2:A (1.58) BS01 DGS N/A GO:0004065 ... G0L000 40383559
    988833 9hh2:A (1.58) BS02 GAL N/A GO:0004065 ... G0L000 40383559
    988834 9hh2:A (1.58) BS03 DGS N/A GO:0004065 ... G0L000 40383559
    988835 9hh2:A (1.58) BS04 CA N/A GO:0004065 ... G0L000 40383559
    988836 9hh2:B (1.58) BS01 DGS N/A GO:0004065 ... G0L000 40383559
    988837 9hh2:B (1.58) BS02 GAL N/A GO:0004065 ... G0L000 40383559
    988838 9hh2:B (1.58) BS03 DGS N/A GO:0004065 ... G0L000 40383559
    988839 9hh2:B (1.58) BS04 CA N/A GO:0004065 ... G0L000 40383559
    988840 9hh3:A (2.26) BS01 CA N/A GO:0004065 ... G0L000 40383559
    988841 9hh3:B (2.26) BS01 CA N/A GO:0004065 ... G0L000 40383559
    988842 9hh3:C (2.26) BS01 CA N/A GO:0004065 ... G0L000 40383559
    988843 9hh3:D (2.26) BS01 CA N/A GO:0004065 ... G0L000 40383559
    988844 9hh4:A (1.92) BS01 9RN N/A GO:0004065 ... G0L000 40383559
    988845 9hh4:A (1.92) BS02 GAL N/A GO:0004065 ... G0L000 40383559
    988846 9hh4:A (1.92) BS03 9RN N/A GO:0004065 ... G0L000 40383559
    988847 9hh4:A (1.92) BS04 CA N/A GO:0004065 ... G0L000 40383559
    988848 9hh4:B (1.92) BS01 9RN N/A GO:0004065 ... G0L000 40383559
    988849 9hh4:B (1.92) BS02 GAL N/A GO:0004065 ... G0L000 40383559
    988850 9hh4:B (1.92) BS03 9RN N/A GO:0004065 ... G0L000 40383559
    988851 9hh4:B (1.92) BS04 CA N/A GO:0004065 ... G0L000 40383559
    988852 9hh4:C (1.92) BS01 9RN N/A GO:0004065 ... G0L000 40383559
    988853 9hh4:C (1.92) BS02 GAL N/A GO:0004065 ... G0L000 40383559
    988854 9hh4:C (1.92) BS03 9RN N/A GO:0004065 ... G0L000 40383559
    988855 9hh4:C (1.92) BS04 CA N/A GO:0004065 ... G0L000 40383559
    988856 9hh4:D (1.92) BS01 9RN N/A GO:0004065 ... G0L000 40383559
    988857 9hh4:D (1.92) BS02 GAL N/A GO:0004065 ... G0L000 40383559
    988858 9hh4:D (1.92) BS03 9RN N/A GO:0004065 ... G0L000 40383559
    988859 9hh4:D (1.92) BS04 CA N/A GO:0004065 ... G0L000 40383559
    988860 9hh5:A (2.08) BS01 GXU N/A N/A A0A8B6RWT5 40371758
    988861 9hh6:A (2.0) BS01 A1IUV N/A N/A A0A8B6RWT5 40371758
    988862 9hh6:B (2.0) BS01 A1IUV N/A N/A A0A8B6RWT5 40371758
    988863 9hh7:A (1.79) BS01 A1IUW N/A N/A Q8IJ72 40099623
    988864 9hh8:A (1.61) BS01 A1IUW N/A N/A A5KDW3 40099623
    988865 9hha:A (1.9) BS01 A1IUX N/A N/A A5KDW3 40099623
    988866 9hhb:A (2.26) BS01 A1IUY N/A N/A A5KDW3 40099623
    988867 9hhc:A (1.56) BS01 BU3 N/A N/A Q8IJ72 40099623
    988868 9hhc:A (1.56) BS02 I5K N/A N/A Q8IJ72 40099623
    988869 9hhd:A (2.26) BS01 A1IUZ N/A N/A Q8IJ72 40099623
    988870 9hhg:A (1.95) BS01 ZN N/A N/A P0DTC1 N/A
    988871 9hhg:A (1.95) BS02 ZN N/A N/A P0DTC1 N/A
    988872 9hhg:B (1.95) BS01 ZN N/A N/A P0DTC1 N/A
    988873 9hhh:A (1.98) BS01 ZN N/A N/A P0DTC1 N/A
    988874 9hhh:B (1.98) BS01 ZN N/A N/A P0DTC1 N/A
    988875 9hhi:A (2.7) BS01 ZN N/A N/A P0DTC1 N/A
    988876 9hhj:A (1.83) BS01 BMA N/A GO:0016985 ... A0A7C3MIF0 N/A
    988877 9hhj:A (1.83) BS02 BMA N/A GO:0016985 ... A0A7C3MIF0 N/A
    988878 9hhj:A (1.83) BS03 BMA N/A GO:0016985 ... A0A7C3MIF0 N/A
    988879 9hhj:A (1.83) BS04 BMA N/A GO:0016985 ... A0A7C3MIF0 N/A
    988880 9hhk:A (2.23) BS01 A1IU1 N/A N/A P54274 41266376
    988881 9hhl:A (6.53) BS01 ADP N/A N/A F2Z5G5 41840068
    988882 9hhl:B (6.53) BS01 ADP N/A N/A F2Z5G5 41840068
    988883 9hhl:C (6.53) BS01 ADP N/A N/A F2Z5G5 41840068
    988884 9hhl:D (6.53) BS01 ADP N/A N/A F2Z5G5 41840068
    988885 9hhl:E (6.53) BS01 ADP N/A N/A F2Z5G5 41840068
    988886 9hhl:F (6.53) BS01 ADP N/A N/A F2Z5G5 41840068
    988887 9hhl:G (6.53) BS01 ADP N/A N/A F2Z5G5 41840068
    988888 9hhl:H (6.53) BS01 ATP N/A GO:0001738 ... Q6QAQ1 41840068
    988889 9hhl:I (6.53) BS01 ADP N/A N/A F2Z5G5 41840068
    988890 9hhl:J (6.53) BS01 ATP N/A GO:0005200 ... I3LHK5 41840068
    988891 9hhm:A (2.25) BS01 A1IVA N/A GO:0003796 ... P00720
    Q8TCG2
    N/A
    988892 9hhm:B (2.25) BS01 A1IVA N/A GO:0003796 ... P00720
    Q8TCG2
    N/A
    988893 9hhm:B (2.25) BS02 A1IVA N/A GO:0003796 ... P00720
    Q8TCG2
    N/A
    988894 9hhw:A (3.0) BS01 A1IU7 N/A GO:0004672 ... Q5TCY1 39716901
    988895 9hi0:A (1.37) BS01 NAD N/A GO:0003974 ... Q14376 N/A
    988896 9hi0:A (1.37) BS02 A1IU2 N/A GO:0003974 ... Q14376 N/A
    988897 9hi0:B (1.37) BS01 NAD N/A GO:0003974 ... Q14376 N/A
    988898 9hi0:B (1.37) BS02 A1IU2 N/A GO:0003974 ... Q14376 N/A
    988899 9hi1:A (0.95) BS01 NAD N/A GO:0003974 ... Q14376 N/A
    988900 9hi1:A (0.95) BS02 A1IU5 N/A GO:0003974 ... Q14376 N/A
    988901 9hi1:B (0.95) BS01 NAD N/A GO:0003974 ... Q14376 N/A
    988902 9hi1:B (0.95) BS02 A1IU5 N/A GO:0003974 ... Q14376 N/A
    988903 9hi2:A (1.37) BS01 NAI N/A GO:0003974 ... Q14376 N/A
    988904 9hi2:A (1.37) BS02 A1IU6 N/A GO:0003974 ... Q14376 N/A
    988905 9hi3:A (1.7) BS01 FES N/A GO:0009055 ... P00221
    Q6D8U5
    N/A
    988906 9hia:A (2.02) BS01 FBP N/A GO:0000287 ... P14618 41289402
    988907 9hia:B (2.02) BS01 FBP N/A GO:0000287 ... P14618 41289402
    988908 9hia:C (2.02) BS01 FBP N/A GO:0000287 ... P14618 41289402
    988909 9hia:D (2.02) BS01 FBP N/A GO:0000287 ... P14618 41289402
    988910 9hib:B (2.17) BS01 MG N/A GO:0000287 ... P14618 41289402
    988911 9hic:A (2.9) BS01 FBP N/A GO:0000287 ... P14618 41289402
    988912 9hic:A (2.9) BS02 MG N/A GO:0000287 ... P14618 41289402
    988913 9hic:B (2.9) BS01 FBP N/A GO:0000287 ... P14618 41289402
    988914 9hic:C (2.9) BS01 FBP N/A GO:0000287 ... P14618 41289402
    988915 9hic:C (2.9) BS02 MG N/A GO:0000287 ... P14618 41289402
    988916 9hic:D (2.9) BS01 FBP N/A GO:0000287 ... P14618 41289402
    988917 9hic:D (2.9) BS02 MG N/A GO:0000287 ... P14618 41289402
    988918 9hif:A (3.65) BS01 HEM N/A GO:0004122 ... P35520 40327797
    988919 9hif:B (3.65) BS01 HEM N/A GO:0004122 ... P35520 40327797
    988920 9hij:A (1.6) BS01 MG N/A N/A P02881
    P02882
    40118405
    988921 9hil:A (1.6) BS01 C N/A GO:0004590 ... P11172 41058608
    988922 9hil:B (1.6) BS01 C N/A GO:0004590 ... P11172 41058608
    988923 9him:A (1.36) BS01 BMA N/A GO:0016985 ... A0A7C3MIF0 N/A
    988924 9him:A (1.36) BS02 BMA N/A GO:0016985 ... A0A7C3MIF0 N/A
    988925 9him:A (1.36) BS03 BMA N/A GO:0016985 ... A0A7C3MIF0 N/A
    988926 9hin:A (1.55) BS01 A1IU9 N/A N/A Q9C029 N/A
    988927 9hip:A (3.31) BS01 GNP N/A GO:0002098 ... P25522 40884400
    988928 9hip:B (3.31) BS01 GNP N/A GO:0002098 ... P25522 40884400
    988929 9hip:C (3.31) BS01 FAD N/A GO:0002098 ... P0A6U3 40884400
    988930 9hiq:A (4.02) BS01 GNP N/A GO:0002098 ... P25522 40884400
    988931 9hiq:B (4.02) BS01 GNP N/A GO:0002098 ... P25522 40884400
    988932 9hiq:C (4.02) BS01 FAD N/A GO:0002098 ... P0A6U3 40884400
    988933 9hiq:D (4.02) BS01 FAD N/A GO:0002098 ... P0A6U3 40884400
    988934 9hiq:E (4.02) BS01 GNP N/A GO:0002098 ... P25522 40884400
    988935 9hiq:F (4.02) BS01 GNP N/A GO:0002098 ... P25522 40884400
    988936 9hir:C (4.12) BS01 FAD N/A GO:0002098 ... P0A6U3 40795964
    988937 9hir:D (4.12) BS01 FAD N/A GO:0002098 ... P0A6U3 40795964
    988938 9hiu:A (3.2) BS01 peptide N/A GO:0000082 ... P20248 40817109
    988939 9hiw:A (3.1) BS01 peptide N/A GO:0000082 ... P20248 40817109
    988940 9hix:J (2.6) BS01 V0G N/A GO:0000439 ... P50613 N/A
    988941 9hiy:J (2.3) BS01 AGS N/A GO:0000439 ... P50613 N/A
    988942 9hiy:J (2.3) BS02 MG N/A GO:0000439 ... P50613 N/A
    988943 9hj0:J (2.6) BS01 I74 N/A GO:0000439 ... P50613 N/A
    988944 9hj1:A (2.9) BS01 peptide N/A GO:0000082 ... P20248 40817109
    988945 9hj3:A (3.46) BS01 Z41 N/A GO:0019867 ... Q8A1E1 41034344
    988946 9hj3:F (3.46) BS01 Z41 N/A N/A Q89ZL0 41034344
    988947 9hj4:A (1.06) BS01 ZN N/A GO:0000166 ... P21589 40370983
    988948 9hj4:A (1.06) BS02 ZN N/A GO:0000166 ... P21589 40370983
    988949 9hj4:A (1.06) BS03 CA N/A GO:0000166 ... P21589 40370983
    988950 9hj4:A (1.06) BS04 A1IVB N/A GO:0000166 ... P21589 40370983
    988951 9hj5:A (2.093) BS01 FAD N/A GO:0008115 ... Q0UIL6 N/A
    988952 9hj5:B (2.093) BS01 FAD N/A GO:0008115 ... Q0UIL6 N/A
    988953 9hj6:A (2.3) BS01 EUJ N/A GO:0001891 ... Q9GZU1 40532704
    988954 9hj6:A (2.3) BS02 A1IVC N/A GO:0001891 ... Q9GZU1 40532704
    988955 9hj6:B (2.3) BS01 A1IVC N/A GO:0001891 ... Q9GZU1 40532704
    988956 9hj6:B (2.3) BS02 EUJ N/A GO:0001891 ... Q9GZU1 40532704
    988957 9hj6:C (2.3) BS01 A1IVC N/A GO:0001891 ... Q9GZU1 40532704
    988958 9hj6:C (2.3) BS02 EUJ N/A GO:0001891 ... Q9GZU1 40532704
    988959 9hj6:D (2.3) BS01 A1IVC N/A GO:0001891 ... Q9GZU1 40532704
    988960 9hj6:D (2.3) BS02 EUJ N/A GO:0001891 ... Q9GZU1 40532704
    988961 9hj8:A (2.1) BS01 EUJ N/A GO:0001891 ... Q9GZU1 40532704
    988962 9hj8:A (2.1) BS02 A1IVD N/A GO:0001891 ... Q9GZU1 40532704
    988963 9hj8:A (2.1) BS03 A1IVD N/A GO:0001891 ... Q9GZU1 40532704
    988964 9hj8:B (2.1) BS01 EUJ N/A GO:0001891 ... Q9GZU1 40532704
    988965 9hj8:B (2.1) BS02 A1IVD N/A GO:0001891 ... Q9GZU1 40532704
    988966 9hj8:B (2.1) BS03 A1IVD N/A GO:0001891 ... Q9GZU1 40532704
    988967 9hj8:C (2.1) BS01 EUJ N/A GO:0001891 ... Q9GZU1 40532704
    988968 9hj8:C (2.1) BS02 A1IVD N/A GO:0001891 ... Q9GZU1 40532704
    988969 9hj8:C (2.1) BS03 A1IVD N/A GO:0001891 ... Q9GZU1 40532704
    988970 9hj8:D (2.1) BS01 A1IVD N/A GO:0001891 ... Q9GZU1 40532704
    988971 9hj8:D (2.1) BS02 EUJ N/A GO:0001891 ... Q9GZU1 40532704
    988972 9hj8:D (2.1) BS03 A1IVD N/A GO:0001891 ... Q9GZU1 40532704
    988973 9hjc:A (2.1) BS01 VIB N/A GO:0004788 ... Q9H3S4 N/A
    988974 9hjc:A (2.1) BS02 MG N/A GO:0004788 ... Q9H3S4 N/A
    988975 9hjc:A (2.1) BS03 VIB N/A GO:0004788 ... Q9H3S4 N/A
    988976 9hjc:B (2.1) BS01 VIB N/A GO:0004788 ... Q9H3S4 N/A
    988977 9hjc:B (2.1) BS02 VIB N/A GO:0004788 ... Q9H3S4 N/A
    988978 9hjc:B (2.1) BS03 MG N/A GO:0004788 ... Q9H3S4 N/A
    988979 9hjd:A (3.35) BS01 A1IVJ N/A GO:0005515 ... Q9BZV2 40702645
    988980 9hjg:A (2.31) BS01 ZN N/A GO:0000166 ... P21589 40378575
    988981 9hjg:A (2.31) BS02 ZN N/A GO:0000166 ... P21589 40378575
    988982 9hjg:A (2.31) BS03 A1IVH N/A GO:0000166 ... P21589 40378575
    988983 9hjg:B (2.31) BS01 ZN N/A GO:0000166 ... P21589 40378575
    988984 9hjg:B (2.31) BS02 ZN N/A GO:0000166 ... P21589 40378575
    988985 9hjg:B (2.31) BS03 A1IVH N/A GO:0000166 ... P21589 40378575
    988986 9hjg:C (2.31) BS01 ZN N/A GO:0000166 ... P21589 40378575
    988987 9hjg:C (2.31) BS02 ZN N/A GO:0000166 ... P21589 40378575
    988988 9hjg:C (2.31) BS03 A1IVH N/A GO:0000166 ... P21589 40378575
    988989 9hjg:C (2.31) BS04 CA N/A GO:0000166 ... P21589 40378575
    988990 9hjg:D (2.31) BS01 ZN N/A GO:0000166 ... P21589 40378575
    988991 9hjg:D (2.31) BS02 ZN N/A GO:0000166 ... P21589 40378575
    988992 9hjg:D (2.31) BS03 A1IVH N/A GO:0000166 ... P21589 40378575
    988993 9hjh:A (1.2) BS01 A1IVK N/A GO:0008233 ... P0DTC1 40186586
    988994 9hjh:B (1.2) BS01 A1IVK N/A GO:0008233 ... P0DTC1 40186586
    988995 9hjk:A (3.27) BS01 CLR N/A GO:0000325 ... Q8W4K3 N/A
    988996 9hjk:A (3.27) BS02 AV0 N/A GO:0000325 ... Q8W4K3 N/A
    988997 9hjk:B (3.27) BS01 AV0 N/A N/A N/A N/A
    988998 9hjn:A (1.651) BS01 NAD N/A GO:0003974 ... Q14376 N/A
    988999 9hjn:A (1.651) BS02 JGA N/A GO:0003974 ... Q14376 N/A
    989000 9hjn:B (1.651) BS01 NAD N/A GO:0003974 ... Q14376 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).