SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    989001 9hjn:B (1.651) BS02 JGA N/A GO:0003974 ... Q14376 N/A
    989002 9hjo:A (2.401) BS01 dna N/A GO:0003677 ... Q8IYD8 40447800
    989003 9hjo:B (2.401) BS01 dna N/A GO:0000785 ... Q9BTP7 40447800
    989004 9hjo:B (2.401) BS02 MG N/A GO:0000785 ... Q9BTP7 40447800
    989005 9hjo:B (2.401) BS03 MG N/A GO:0000785 ... Q9BTP7 40447800
    989006 9hjo:C (2.401) BS01 dna N/A GO:0003677 ... Q8IYD8 40447800
    989007 9hjo:D (2.401) BS01 dna N/A GO:0000785 ... Q9BTP7 40447800
    989008 9hjo:D (2.401) BS02 MG N/A GO:0000785 ... Q9BTP7 40447800
    989009 9hjo:D (2.401) BS03 MG N/A GO:0000785 ... Q9BTP7 40447800
    989010 9hjs:A (2.51) BS01 GRG N/A GO:0004161 ... O95749 40621901
    989011 9hjs:A (2.51) BS02 MG N/A GO:0004161 ... O95749 40621901
    989012 9hjs:A (2.51) BS03 MG N/A GO:0004161 ... O95749 40621901
    989013 9hjs:B (2.51) BS01 GRG N/A GO:0004161 ... O95749 40621901
    989014 9hjs:B (2.51) BS02 MG N/A GO:0004161 ... O95749 40621901
    989015 9hjs:B (2.51) BS03 MG N/A GO:0004161 ... O95749 40621901
    989016 9hjs:C (2.51) BS01 GRG N/A GO:0004161 ... O95749 40621901
    989017 9hjs:C (2.51) BS02 MG N/A GO:0004161 ... O95749 40621901
    989018 9hjs:C (2.51) BS03 MG N/A GO:0004161 ... O95749 40621901
    989019 9hjs:D (2.51) BS01 GRG N/A GO:0004161 ... O95749 40621901
    989020 9hjs:D (2.51) BS02 MG N/A GO:0004161 ... O95749 40621901
    989021 9hjs:D (2.51) BS03 MG N/A GO:0004161 ... O95749 40621901
    989022 9hjs:E (2.51) BS01 GRG N/A GO:0004161 ... O95749 40621901
    989023 9hjs:E (2.51) BS02 MG N/A GO:0004161 ... O95749 40621901
    989024 9hjs:E (2.51) BS03 MG N/A GO:0004161 ... O95749 40621901
    989025 9hjs:F (2.51) BS01 GRG N/A GO:0004161 ... O95749 40621901
    989026 9hjs:F (2.51) BS02 MG N/A GO:0004161 ... O95749 40621901
    989027 9hjt:A (3.26) BS01 dna N/A GO:0000981 ... Q96JP5 40608935
    989028 9hjt:A (3.26) BS02 dna N/A GO:0000981 ... Q96JP5 40608935
    989029 9hjt:A (3.26) BS03 ZN N/A GO:0000981 ... Q96JP5 40608935
    989030 9hjt:A (3.26) BS04 ZN N/A GO:0000981 ... Q96JP5 40608935
    989031 9hjt:A (3.26) BS05 ZN N/A GO:0000981 ... Q96JP5 40608935
    989032 9hjt:A (3.26) BS06 ZN N/A GO:0000981 ... Q96JP5 40608935
    989033 9hjt:A (3.26) BS07 ZN N/A GO:0000981 ... Q96JP5 40608935
    989034 9hju:A (3.16) BS01 dna N/A GO:0000981 ... Q96JP5 40608935
    989035 9hju:A (3.16) BS02 dna N/A GO:0000981 ... Q96JP5 40608935
    989036 9hju:A (3.16) BS03 ZN N/A GO:0000981 ... Q96JP5 40608935
    989037 9hju:A (3.16) BS04 ZN N/A GO:0000981 ... Q96JP5 40608935
    989038 9hju:A (3.16) BS05 ZN N/A GO:0000981 ... Q96JP5 40608935
    989039 9hju:A (3.16) BS06 ZN N/A GO:0000981 ... Q96JP5 40608935
    989040 9hju:A (3.16) BS07 ZN N/A GO:0000981 ... Q96JP5 40608935
    989041 9hjv:A (2.2) BS01 FDA N/A GO:0000166 ... A0A3T0V9Y5 40342919
    989042 9hjv:A (2.2) BS02 P77 N/A GO:0000166 ... A0A3T0V9Y5 40342919
    989043 9hjw:A (1.9) BS01 FDA N/A GO:0000166 ... A0A3T0V9Y5 40342919
    989044 9hjw:A (1.9) BS02 A1IVL N/A GO:0000166 ... A0A3T0V9Y5 40342919
    989045 9hjy:A (1.6) BS01 E64 N/A N/A A0A481Y5N4 N/A
    989046 9hk5:A (1.491) BS01 3NG N/A GO:0000785 ... P19784 40223482
    989047 9hke:A (1.9) BS01 FDA N/A GO:0000166 ... A0A3T0V9Y5 40342919
    989048 9hke:A (1.9) BS02 TFP N/A GO:0000166 ... A0A3T0V9Y5 40342919
    989049 9hkf:A (2.4) BS01 PUJ N/A GO:0003824 ... A0A453KFI0
    P0A3G2
    41131894
    989050 9hkf:A (2.4) BS02 FMN N/A GO:0003824 ... A0A453KFI0
    P0A3G2
    41131894
    989051 9hkf:A (2.4) BS03 PUJ N/A GO:0003824 ... A0A453KFI0
    P0A3G2
    41131894
    989052 9hkf:B (2.4) BS01 FMN N/A GO:0003824 ... A0A453KFI0
    P0A3G2
    41131894
    989053 9hkf:B (2.4) BS02 PUJ N/A GO:0003824 ... A0A453KFI0
    P0A3G2
    41131894
    989054 9hkf:B (2.4) BS03 PUJ N/A GO:0003824 ... A0A453KFI0
    P0A3G2
    41131894
    989055 9hki:A (1.9) BS01 MG N/A GO:0000287 ... P00722 N/A
    989056 9hki:B (1.9) BS01 MG N/A GO:0000287 ... P00722 N/A
    989057 9hki:C (1.9) BS01 MG N/A GO:0000287 ... P00722 N/A
    989058 9hki:D (1.9) BS01 MG N/A GO:0000287 ... P00722 N/A
    989059 9hkk:A (3.55) BS01 A1IVP N/A GO:0005886 ... O97467 N/A
    989060 9hkk:B (3.55) BS01 A1IVP N/A GO:0005886 ... O97467 N/A
    989061 9hkk:C (3.55) BS01 A1IVP N/A GO:0005886 ... O97467 N/A
    989062 9hkk:D (3.55) BS01 A1IVP N/A GO:0005886 ... O97467 N/A
    989063 9hkl:A (2.85) BS01 ABU N/A GO:0005886 ... P54582 N/A
    989064 9hkl:B (2.85) BS01 ABU N/A GO:0005886 ... P54582 N/A
    989065 9hkp:A (2.82) BS01 A1IVQ N/A GO:0004672 ... P68400 39835439
    989066 9hkp:B (2.82) BS01 A1IVQ N/A GO:0004672 ... P68400 39835439
    989067 9hkq:B (3.3) BS01 peptide N/A GO:0000139 ... Q8WLS4 N/A
    989068 9hkq:F (3.3) BS01 peptide N/A N/A N/A N/A
    989069 9hks:A (2.4) BS01 A1IVR N/A GO:0004672 ... P68400 39835439
    989070 9hks:B (2.4) BS01 A1IVR N/A GO:0004672 ... P68400 39835439
    989071 9hks:B (2.4) BS02 A1IVR N/A GO:0004672 ... P68400 39835439
    989072 9hku:A (2.356) BS01 ZN N/A N/A F8VPR5 N/A
    989073 9hku:A (2.356) BS02 ZN N/A N/A F8VPR5 N/A
    989074 9hku:A (2.356) BS03 ZN N/A N/A F8VPR5 N/A
    989075 9hku:A (2.356) BS04 ZN N/A N/A F8VPR5 N/A
    989076 9hku:A (2.356) BS05 ACO N/A N/A F8VPR5 N/A
    989077 9hku:B (2.356) BS01 ZN N/A N/A F8VPR5 N/A
    989078 9hku:B (2.356) BS02 ZN N/A N/A F8VPR5 N/A
    989079 9hku:B (2.356) BS03 ZN N/A N/A F8VPR5 N/A
    989080 9hku:B (2.356) BS04 ZN N/A N/A F8VPR5 N/A
    989081 9hku:B (2.356) BS05 ACO N/A N/A F8VPR5 N/A
    989082 9hkv:A (2.88) BS01 NAD N/A GO:0004013 ... Q9I685 N/A
    989083 9hkv:B (2.88) BS01 NAD N/A GO:0004013 ... Q9I685 N/A
    989084 9hkv:B (2.88) BS02 NAD N/A GO:0004013 ... Q9I685 N/A
    989085 9hkv:C (2.88) BS01 NAD N/A GO:0004013 ... Q9I685 N/A
    989086 9hkv:C (2.88) BS02 NAD N/A GO:0004013 ... Q9I685 N/A
    989087 9hkv:D (2.88) BS01 NAD N/A GO:0004013 ... Q9I685 N/A
    989088 9hkw:A (2.85) BS01 NAD N/A GO:0004013 ... Q9I685 N/A
    989089 9hkw:B (2.85) BS01 NAD N/A GO:0004013 ... Q9I685 N/A
    989090 9hkw:B (2.85) BS02 NAD N/A GO:0004013 ... Q9I685 N/A
    989091 9hkw:C (2.85) BS01 NAD N/A GO:0004013 ... Q9I685 N/A
    989092 9hkw:C (2.85) BS02 NAD N/A GO:0004013 ... Q9I685 N/A
    989093 9hkw:D (2.85) BS01 NAD N/A GO:0004013 ... Q9I685 N/A
    989094 9hkw:D (2.85) BS02 ADN N/A GO:0004013 ... Q9I685 N/A
    989095 9hkx:A (2.83) BS01 NAD N/A GO:0004013 ... Q9I685 N/A
    989096 9hkx:B (2.83) BS01 NAD N/A GO:0004013 ... Q9I685 N/A
    989097 9hkx:C (2.83) BS01 NAD N/A GO:0004013 ... Q9I685 N/A
    989098 9hkx:C (2.83) BS02 NAD N/A GO:0004013 ... Q9I685 N/A
    989099 9hkx:C (2.83) BS03 ADN N/A GO:0004013 ... Q9I685 N/A
    989100 9hkx:D (2.83) BS01 NAD N/A GO:0004013 ... Q9I685 N/A
    989101 9hkx:D (2.83) BS02 ADN N/A GO:0004013 ... Q9I685 N/A
    989102 9hky:A (2.89) BS01 NAD N/A GO:0004013 ... Q9I685 N/A
    989103 9hky:A (2.89) BS02 NAD N/A GO:0004013 ... Q9I685 N/A
    989104 9hky:B (2.89) BS01 NAD N/A GO:0004013 ... Q9I685 N/A
    989105 9hky:B (2.89) BS02 ADN N/A GO:0004013 ... Q9I685 N/A
    989106 9hky:C (2.89) BS01 NAD N/A GO:0004013 ... Q9I685 N/A
    989107 9hky:C (2.89) BS02 NAD N/A GO:0004013 ... Q9I685 N/A
    989108 9hky:D (2.89) BS01 NAD N/A GO:0004013 ... Q9I685 N/A
    989109 9hky:D (2.89) BS02 NAD N/A GO:0004013 ... Q9I685 N/A
    989110 9hky:D (2.89) BS03 ADN N/A GO:0004013 ... Q9I685 N/A
    989111 9hkz:A (3.1) BS01 NAD N/A GO:0004013 ... Q9I685 N/A
    989112 9hkz:A (3.1) BS02 NAD N/A GO:0004013 ... Q9I685 N/A
    989113 9hkz:B (3.1) BS01 NAD N/A GO:0004013 ... Q9I685 N/A
    989114 9hkz:B (3.1) BS02 NAD N/A GO:0004013 ... Q9I685 N/A
    989115 9hkz:C (3.1) BS01 NAD N/A GO:0004013 ... Q9I685 N/A
    989116 9hkz:C (3.1) BS02 NAD N/A GO:0004013 ... Q9I685 N/A
    989117 9hkz:D (3.1) BS01 NAD N/A GO:0004013 ... Q9I685 N/A
    989118 9hkz:D (3.1) BS02 ADN N/A GO:0004013 ... Q9I685 N/A
    989119 9hl0:A (2.63) BS01 A1IVS N/A GO:0004672 ... P68400 39835439
    989120 9hl0:B (2.63) BS01 A1IVS N/A GO:0004672 ... P68400 39835439
    989121 9hl0:B (2.63) BS02 A1IVS N/A GO:0004672 ... P68400 39835439
    989122 9hl1:A (1.56) BS01 HEM N/A GO:0004601 ... A0ABF7PHP1 40843530
    989123 9hl1:A (1.56) BS02 NO N/A GO:0004601 ... A0ABF7PHP1 40843530
    989124 9hl1:B (1.56) BS01 HEM N/A GO:0004601 ... A0ABF7PHP1 40843530
    989125 9hl1:B (1.56) BS02 NO N/A GO:0004601 ... A0ABF7PHP1 40843530
    989126 9hl1:C (1.56) BS01 HEM N/A GO:0004601 ... A0ABF7PHP1 40843530
    989127 9hl1:C (1.56) BS02 NO N/A GO:0004601 ... A0ABF7PHP1 40843530
    989128 9hl1:D (1.56) BS01 HEM N/A GO:0004601 ... A0ABF7PHP1 40843530
    989129 9hl1:D (1.56) BS02 NO N/A GO:0004601 ... A0ABF7PHP1 40843530
    989130 9hl1:E (1.56) BS01 HEM N/A GO:0004601 ... A0ABF7PHP1 40843530
    989131 9hl1:E (1.56) BS02 NO N/A GO:0004601 ... A0ABF7PHP1 40843530
    989132 9hl1:F (1.56) BS01 HEM N/A GO:0004601 ... A0ABF7PHP1 40843530
    989133 9hl1:F (1.56) BS02 NO N/A GO:0004601 ... A0ABF7PHP1 40843530
    989134 9hl3:A (2.1) BS01 EUJ N/A GO:0001891 ... Q9GZU1 40532704
    989135 9hl3:A (2.1) BS02 A1IVZ N/A GO:0001891 ... Q9GZU1 40532704
    989136 9hl3:B (2.1) BS01 EUJ N/A GO:0001891 ... Q9GZU1 40532704
    989137 9hl3:B (2.1) BS02 A1IVZ N/A GO:0001891 ... Q9GZU1 40532704
    989138 9hl3:C (2.1) BS01 EUJ N/A GO:0001891 ... Q9GZU1 40532704
    989139 9hl3:C (2.1) BS02 A1IVZ N/A GO:0001891 ... Q9GZU1 40532704
    989140 9hl3:D (2.1) BS01 EUJ N/A GO:0001891 ... Q9GZU1 40532704
    989141 9hl3:D (2.1) BS02 A1IVZ N/A GO:0001891 ... Q9GZU1 40532704
    989142 9hl4:A (2.1) BS01 EUJ N/A GO:0001891 ... Q9GZU1 40532704
    989143 9hl4:A (2.1) BS02 A1IV0 N/A GO:0001891 ... Q9GZU1 40532704
    989144 9hl4:B (2.1) BS01 A1IV0 N/A GO:0001891 ... Q9GZU1 40532704
    989145 9hl4:B (2.1) BS02 EUJ N/A GO:0001891 ... Q9GZU1 40532704
    989146 9hl4:C (2.1) BS01 A1IV0 N/A GO:0001891 ... Q9GZU1 40532704
    989147 9hl4:C (2.1) BS02 EUJ N/A GO:0001891 ... Q9GZU1 40532704
    989148 9hl4:D (2.1) BS01 A1IV0 N/A GO:0001891 ... Q9GZU1 40532704
    989149 9hl4:D (2.1) BS02 EUJ N/A GO:0001891 ... Q9GZU1 40532704
    989150 9hl6:A (2.2) BS01 EUJ N/A GO:0001891 ... Q9GZU1 40532704
    989151 9hl6:A (2.2) BS02 A1IV1 N/A GO:0001891 ... Q9GZU1 40532704
    989152 9hl6:A (2.2) BS03 A1IV1 N/A GO:0001891 ... Q9GZU1 40532704
    989153 9hl6:B (2.2) BS01 A1IV1 N/A GO:0001891 ... Q9GZU1 40532704
    989154 9hl6:B (2.2) BS02 EUJ N/A GO:0001891 ... Q9GZU1 40532704
    989155 9hl6:B (2.2) BS03 A1IV1 N/A GO:0001891 ... Q9GZU1 40532704
    989156 9hl6:C (2.2) BS01 EUJ N/A GO:0001891 ... Q9GZU1 40532704
    989157 9hl6:C (2.2) BS02 A1IV1 N/A GO:0001891 ... Q9GZU1 40532704
    989158 9hl6:C (2.2) BS03 A1IV1 N/A GO:0001891 ... Q9GZU1 40532704
    989159 9hl6:D (2.2) BS01 A1IV1 N/A GO:0001891 ... Q9GZU1 40532704
    989160 9hl6:D (2.2) BS02 EUJ N/A GO:0001891 ... Q9GZU1 40532704
    989161 9hl6:D (2.2) BS03 A1IV1 N/A GO:0001891 ... Q9GZU1 40532704
    989162 9hl7:B (2.28) BS01 A1IVT N/A GO:0004672 ... P68400 39835439
    989163 9hl7:B (2.28) BS02 A1IVT N/A GO:0004672 ... P68400 39835439
    989164 9hl7:C (2.28) BS01 A1IVT N/A GO:0004672 ... P68400 39835439
    989165 9hl7:C (2.28) BS02 A1IVT N/A GO:0004672 ... P68400 39835439
    989166 9hl8:A (2.2) BS01 EUJ N/A GO:0001891 ... Q9GZU1 40532704
    989167 9hl8:A (2.2) BS02 A1IV2 N/A GO:0001891 ... Q9GZU1 40532704
    989168 9hl8:A (2.2) BS03 A1IV2 N/A GO:0001891 ... Q9GZU1 40532704
    989169 9hl8:B (2.2) BS01 A1IV2 N/A GO:0001891 ... Q9GZU1 40532704
    989170 9hl8:B (2.2) BS02 EUJ N/A GO:0001891 ... Q9GZU1 40532704
    989171 9hl8:B (2.2) BS03 A1IV2 N/A GO:0001891 ... Q9GZU1 40532704
    989172 9hl8:C (2.2) BS01 A1IV2 N/A GO:0001891 ... Q9GZU1 40532704
    989173 9hl8:C (2.2) BS02 EUJ N/A GO:0001891 ... Q9GZU1 40532704
    989174 9hl8:C (2.2) BS03 A1IV2 N/A GO:0001891 ... Q9GZU1 40532704
    989175 9hl8:D (2.2) BS01 A1IV2 N/A GO:0001891 ... Q9GZU1 40532704
    989176 9hl8:D (2.2) BS02 A1IV2 N/A GO:0001891 ... Q9GZU1 40532704
    989177 9hl8:D (2.2) BS03 EUJ N/A GO:0001891 ... Q9GZU1 40532704
    989178 9hl9:LA (2.5) BS01 rna N/A GO:0002181 ... Q4FWX5 40980996
    989179 9hl9:LA (2.5) BS02 rna N/A GO:0002181 ... Q4FWX5 40980996
    989180 9hl9:LA (2.5) BS03 rna N/A GO:0002181 ... Q4FWX5 40980996
    989181 9hl9:LA (2.5) BS04 rna N/A GO:0002181 ... Q4FWX5 40980996
    989182 9hl9:LA (2.5) BS05 MG N/A GO:0002181 ... Q4FWX5 40980996
    989183 9hl9:LB (2.5) BS01 rna N/A GO:0003723 ... Q4Q2Q6 40980996
    989184 9hl9:LB (2.5) BS02 rna N/A GO:0003723 ... Q4Q2Q6 40980996
    989185 9hl9:LB (2.5) BS03 rna N/A GO:0003723 ... Q4Q2Q6 40980996
    989186 9hl9:LB (2.5) BS04 rna N/A GO:0003723 ... Q4Q2Q6 40980996
    989187 9hl9:LB (2.5) BS05 MG N/A GO:0003723 ... Q4Q2Q6 40980996
    989188 9hl9:LC (2.5) BS01 rna N/A GO:0003723 ... E9ADW5 40980996
    989189 9hl9:LC (2.5) BS02 rna N/A GO:0003723 ... E9ADW5 40980996
    989190 9hl9:LC (2.5) BS03 rna N/A GO:0003723 ... E9ADW5 40980996
    989191 9hl9:LD (2.5) BS01 rna N/A GO:0003723 ... P48157 40980996
    989192 9hl9:LD (2.5) BS02 rna N/A GO:0003723 ... P48157 40980996
    989193 9hl9:LE (2.5) BS01 rna N/A GO:0002181 ... Q4QC91 40980996
    989194 9hl9:LE (2.5) BS02 rna N/A GO:0002181 ... Q4QC91 40980996
    989195 9hl9:LE (2.5) BS03 rna N/A GO:0002181 ... Q4QC91 40980996
    989196 9hl9:LE (2.5) BS04 rna N/A GO:0002181 ... Q4QC91 40980996
    989197 9hl9:LF (2.5) BS01 rna N/A GO:0002181 ... Q4Q4D3 40980996
    989198 9hl9:LF (2.5) BS02 rna N/A GO:0002181 ... Q4Q4D3 40980996
    989199 9hl9:LG (2.5) BS01 rna N/A GO:0000470 ... Q4QIP1 40980996
    989200 9hl9:LG (2.5) BS02 rna N/A GO:0000470 ... Q4QIP1 40980996

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).