SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 4937 4938 4939 4940 4941 4942 4943 4944 4945 4946 4947 4948 4949 4950 4951 4952 4953 4954 4955 4956 4957 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    989201 9hl9:LG (2.5) BS03 rna N/A GO:0000470 ... Q4QIP1 40980996
    989202 9hl9:LG (2.5) BS04 MG N/A GO:0000470 ... Q4QIP1 40980996
    989203 9hl9:LH (2.5) BS01 rna N/A GO:0003729 ... Q4QFG2 40980996
    989204 9hl9:LH (2.5) BS02 rna N/A GO:0003729 ... Q4QFG2 40980996
    989205 9hl9:LH (2.5) BS03 rna N/A GO:0003729 ... Q4QFG2 40980996
    989206 9hl9:LH (2.5) BS04 rna N/A GO:0003729 ... Q4QFG2 40980996
    989207 9hl9:LI (2.5) BS01 rna N/A GO:0003723 ... E9AEA8 40980996
    989208 9hl9:LI (2.5) BS02 rna N/A GO:0003723 ... E9AEA8 40980996
    989209 9hl9:LI (2.5) BS03 rna N/A GO:0003723 ... E9AEA8 40980996
    989210 9hl9:LJ (2.5) BS01 rna N/A GO:0003735 ... E9AFK3 40980996
    989211 9hl9:LJ (2.5) BS02 rna N/A GO:0003735 ... E9AFK3 40980996
    989212 9hl9:LK (2.5) BS01 rna N/A GO:0003723 ... Q4QBJ1 40980996
    989213 9hl9:LK (2.5) BS02 rna N/A GO:0003723 ... Q4QBJ1 40980996
    989214 9hl9:LK (2.5) BS03 rna N/A GO:0003723 ... Q4QBJ1 40980996
    989215 9hl9:LL (2.5) BS01 rna N/A GO:0003735 ... E9AFK0 40980996
    989216 9hl9:LL (2.5) BS02 rna N/A GO:0003735 ... E9AFK0 40980996
    989217 9hl9:LM (2.5) BS01 rna N/A GO:0002181 ... Q4Q6S3 40980996
    989218 9hl9:LM (2.5) BS02 rna N/A GO:0002181 ... Q4Q6S3 40980996
    989219 9hl9:LM (2.5) BS03 rna N/A GO:0002181 ... Q4Q6S3 40980996
    989220 9hl9:LM (2.5) BS04 MG N/A GO:0002181 ... Q4Q6S3 40980996
    989221 9hl9:LN (2.5) BS01 rna N/A GO:0003735 ... O97213 40980996
    989222 9hl9:LN (2.5) BS02 rna N/A GO:0003735 ... O97213 40980996
    989223 9hl9:LN (2.5) BS03 rna N/A GO:0003735 ... O97213 40980996
    989224 9hl9:LO (2.5) BS01 rna N/A GO:0000027 ... E9AF09 40980996
    989225 9hl9:LO (2.5) BS02 rna N/A GO:0000027 ... E9AF09 40980996
    989226 9hl9:LO (2.5) BS03 rna N/A GO:0000027 ... E9AF09 40980996
    989227 9hl9:LP (2.5) BS01 rna N/A GO:0002181 ... Q4QG98 40980996
    989228 9hl9:LP (2.5) BS02 rna N/A GO:0002181 ... Q4QG98 40980996
    989229 9hl9:LQ (2.5) BS01 rna N/A GO:0003723 ... Q4QJ37 40980996
    989230 9hl9:LQ (2.5) BS02 rna N/A GO:0003723 ... Q4QJ37 40980996
    989231 9hl9:LQ (2.5) BS03 rna N/A GO:0003723 ... Q4QJ37 40980996
    989232 9hl9:LQ (2.5) BS04 rna N/A GO:0003723 ... Q4QJ37 40980996
    989233 9hl9:LQ (2.5) BS05 rna N/A GO:0003723 ... Q4QJ37 40980996
    989234 9hl9:LR (2.5) BS01 rna N/A GO:0002181 ... Q4Q5J4 40980996
    989235 9hl9:LR (2.5) BS02 rna N/A GO:0002181 ... Q4Q5J4 40980996
    989236 9hl9:LR (2.5) BS03 rna N/A GO:0002181 ... Q4Q5J4 40980996
    989237 9hl9:LS (2.5) BS01 rna N/A GO:0003735 ... Q4QEX4 40980996
    989238 9hl9:LS (2.5) BS02 rna N/A GO:0003735 ... Q4QEX4 40980996
    989239 9hl9:LS (2.5) BS03 rna N/A GO:0003735 ... Q4QEX4 40980996
    989240 9hl9:LT (2.5) BS01 rna N/A GO:0002181 ... Q4QAX6 40980996
    989241 9hl9:LT (2.5) BS02 rna N/A GO:0002181 ... Q4QAX6 40980996
    989242 9hl9:LT (2.5) BS03 rna N/A GO:0002181 ... Q4QAX6 40980996
    989243 9hl9:LT (2.5) BS04 rna N/A GO:0002181 ... Q4QAX6 40980996
    989244 9hl9:LT (2.5) BS05 rna N/A GO:0002181 ... Q4QAX6 40980996
    989245 9hl9:LT (2.5) BS06 MG N/A GO:0002181 ... Q4QAX6 40980996
    989246 9hl9:LU (2.5) BS01 rna N/A GO:0002181 ... Q4Q0X2 40980996
    989247 9hl9:LU (2.5) BS02 rna N/A GO:0002181 ... Q4Q0X2 40980996
    989248 9hl9:LU (2.5) BS03 rna N/A GO:0002181 ... Q4Q0X2 40980996
    989249 9hl9:LV (2.5) BS01 rna N/A GO:0003735 ... Q4QJ20 40980996
    989250 9hl9:LV (2.5) BS02 rna N/A GO:0003735 ... Q4QJ20 40980996
    989251 9hl9:LV (2.5) BS03 rna N/A GO:0003735 ... Q4QJ20 40980996
    989252 9hl9:LV (2.5) BS04 MG N/A GO:0003735 ... Q4QJ20 40980996
    989253 9hl9:LW (2.5) BS01 rna N/A GO:0002181 ... Q4QAC5 40980996
    989254 9hl9:LW (2.5) BS02 rna N/A GO:0002181 ... Q4QAC5 40980996
    989255 9hl9:LX (2.5) BS01 rna N/A GO:0002181 ... Q4Q1W6 40980996
    989256 9hl9:LX (2.5) BS02 rna N/A GO:0002181 ... Q4Q1W6 40980996
    989257 9hl9:LY (2.5) BS01 rna N/A GO:0003735 ... Q4Q504 40980996
    989258 9hl9:LY (2.5) BS02 rna N/A GO:0003735 ... Q4Q504 40980996
    989259 9hl9:LZ (2.5) BS01 rna N/A GO:0003735 ... Q4QGW7 40980996
    989260 9hl9:La (2.5) BS01 rna N/A GO:0000463 ... Q4Q8V7 40980996
    989261 9hl9:La (2.5) BS02 rna N/A GO:0000463 ... Q4Q8V7 40980996
    989262 9hl9:Lb (2.5) BS01 rna N/A GO:0002181 ... Q4Q178 40980996
    989263 9hl9:Lb (2.5) BS02 rna N/A GO:0002181 ... Q4Q178 40980996
    989264 9hl9:Lc (2.5) BS01 rna N/A GO:0000463 ... Q4Q9H4 40980996
    989265 9hl9:Lc (2.5) BS02 rna N/A GO:0000463 ... Q4Q9H4 40980996
    989266 9hl9:Ld (2.5) BS01 rna N/A GO:0003723 ... E9AEK1 40980996
    989267 9hl9:Ld (2.5) BS02 rna N/A GO:0003723 ... E9AEK1 40980996
    989268 9hl9:Le (2.5) BS01 rna N/A GO:0002181 ... E9AFF2 40980996
    989269 9hl9:Le (2.5) BS02 rna N/A GO:0002181 ... E9AFF2 40980996
    989270 9hl9:Le (2.5) BS03 rna N/A GO:0002181 ... E9AFF2 40980996
    989271 9hl9:Le (2.5) BS04 rna N/A GO:0002181 ... E9AFF2 40980996
    989272 9hl9:Lf (2.5) BS01 rna N/A GO:0003735 ... Q4QC11 40980996
    989273 9hl9:Lg (2.5) BS01 rna N/A GO:0002181 ... Q4QHL3 40980996
    989274 9hl9:Lg (2.5) BS02 rna N/A GO:0002181 ... Q4QHL3 40980996
    989275 9hl9:Lg (2.5) BS03 rna N/A GO:0002181 ... Q4QHL3 40980996
    989276 9hl9:Lh (2.5) BS01 rna N/A GO:0003735 ... Q4QDP9 40980996
    989277 9hl9:Lh (2.5) BS02 rna N/A GO:0003735 ... Q4QDP9 40980996
    989278 9hl9:Lh (2.5) BS03 rna N/A GO:0003735 ... Q4QDP9 40980996
    989279 9hl9:Lh (2.5) BS04 MG N/A GO:0003735 ... Q4QDP9 40980996
    989280 9hl9:Li (2.5) BS01 rna N/A GO:0002181 ... Q4QCE1 40980996
    989281 9hl9:Li (2.5) BS02 rna N/A GO:0002181 ... Q4QCE1 40980996
    989282 9hl9:Lj (2.5) BS01 rna N/A GO:0000448 ... E9AEH2 40980996
    989283 9hl9:Lj (2.5) BS02 rna N/A GO:0000448 ... E9AEH2 40980996
    989284 9hl9:Lj (2.5) BS03 rna N/A GO:0000448 ... E9AEH2 40980996
    989285 9hl9:Lj (2.5) BS04 ZN N/A GO:0000448 ... E9AEH2 40980996
    989286 9hl9:Lk (2.5) BS01 rna N/A GO:0002181 ... Q4Q8X0 40980996
    989287 9hl9:Lk (2.5) BS02 rna N/A GO:0002181 ... Q4Q8X0 40980996
    989288 9hl9:Lk (2.5) BS03 rna N/A GO:0002181 ... Q4Q8X0 40980996
    989289 9hl9:Ll (2.5) BS01 rna N/A GO:0002181 ... Q4QEQ0 40980996
    989290 9hl9:Ll (2.5) BS02 rna N/A GO:0002181 ... Q4QEQ0 40980996
    989291 9hl9:Ll (2.5) BS03 rna N/A GO:0002181 ... Q4QEQ0 40980996
    989292 9hl9:Lm (2.5) BS01 rna N/A GO:0003729 ... P69201 40980996
    989293 9hl9:Lm (2.5) BS02 rna N/A GO:0003729 ... P69201 40980996
    989294 9hl9:Lm (2.5) BS03 rna N/A GO:0003729 ... P69201 40980996
    989295 9hl9:Lm (2.5) BS04 ZN N/A GO:0003729 ... P69201 40980996
    989296 9hl9:Ln (2.5) BS01 rna N/A GO:0003735 ... N/A 40980996
    989297 9hl9:Ln (2.5) BS02 rna N/A GO:0003735 ... N/A 40980996
    989298 9hl9:Ln (2.5) BS03 MG N/A GO:0003735 ... N/A 40980996
    989299 9hl9:Lo (2.5) BS01 rna N/A GO:0003735 ... Q4QC01 40980996
    989300 9hl9:Lo (2.5) BS02 rna N/A GO:0003735 ... Q4QC01 40980996
    989301 9hl9:Lo (2.5) BS03 rna N/A GO:0003735 ... Q4QC01 40980996
    989302 9hl9:Lo (2.5) BS04 ZN N/A GO:0003735 ... Q4QC01 40980996
    989303 9hl9:Lp (2.5) BS01 rna N/A GO:0002181 ... Q4Q3L3 40980996
    989304 9hl9:Lp (2.5) BS02 rna N/A GO:0002181 ... Q4Q3L3 40980996
    989305 9hl9:Lp (2.5) BS03 rna N/A GO:0002181 ... Q4Q3L3 40980996
    989306 9hl9:Lp (2.5) BS04 ZN N/A GO:0002181 ... Q4Q3L3 40980996
    989307 9hl9:SA (2.5) BS01 rna N/A GO:0003735 ... Q4FX73 40980996
    989308 9hl9:SA (2.5) BS02 rna N/A GO:0003735 ... Q4FX73 40980996
    989309 9hl9:SB (2.5) BS01 rna N/A GO:0000028 ... Q4Q0Q0 40980996
    989310 9hl9:SC (2.5) BS01 rna N/A GO:0003723 ... Q4Q4A0 40980996
    989311 9hl9:SD (2.5) BS01 rna N/A GO:0003723 ... Q4QIM3 40980996
    989312 9hl9:SE (2.5) BS01 rna N/A GO:0003723 ... Q4QG31 40980996
    989313 9hl9:SF (2.5) BS01 rna N/A GO:0003723 ... Q4QDL5 40980996
    989314 9hl9:SG (2.5) BS01 rna N/A GO:0003735 ... Q9NE83 40980996
    989315 9hl9:SH (2.5) BS01 rna N/A GO:0003729 ... Q868B1 40980996
    989316 9hl9:SH (2.5) BS02 rna N/A GO:0003729 ... Q868B1 40980996
    989317 9hl9:SI (2.5) BS01 rna N/A GO:0003735 ... E9AC32 40980996
    989318 9hl9:SJ (2.5) BS01 rna N/A GO:0003735 ... Q4QGW3 40980996
    989319 9hl9:SK (2.5) BS01 rna N/A GO:0002181 ... P25204 40980996
    989320 9hl9:SK (2.5) BS02 rna N/A GO:0002181 ... P25204 40980996
    989321 9hl9:SK (2.5) BS03 rna N/A GO:0002181 ... P25204 40980996
    989322 9hl9:SL (2.5) BS01 rna N/A GO:0000462 ... Q4Q9A5 40980996
    989323 9hl9:SM (2.5) BS01 rna N/A GO:0003735 ... Q4Q8G4 40980996
    989324 9hl9:SN (2.5) BS01 rna N/A GO:0003723 ... Q4Q1X7 40980996
    989325 9hl9:SO (2.5) BS01 rna N/A GO:0000028 ... Q4Q8H1 40980996
    989326 9hl9:SP (2.5) BS01 rna N/A GO:0003735 ... Q4QC89 40980996
    989327 9hl9:SQ (2.5) BS01 rna N/A GO:0003735 ... Q4QG97 40980996
    989328 9hl9:SR (2.5) BS01 rna N/A GO:0003676 ... Q4Q1Y3 40980996
    989329 9hl9:SS (2.5) BS01 rna N/A GO:0002181 ... Q4Q817 40980996
    989330 9hl9:SS (2.5) BS02 ZN N/A GO:0002181 ... Q4Q817 40980996
    989331 9hl9:ST (2.5) BS01 rna N/A GO:0000462 ... Q4Q3M1 40980996
    989332 9hl9:ST (2.5) BS02 rna N/A GO:0000462 ... Q4Q3M1 40980996
    989333 9hl9:ST (2.5) BS03 rna N/A GO:0000462 ... Q4Q3M1 40980996
    989334 9hl9:SU (2.5) BS01 rna N/A GO:0003735 ... A0A504XM54 40980996
    989335 9hl9:SV (2.5) BS01 rna N/A GO:0003735 ... Q4Q806 40980996
    989336 9hl9:SW (2.5) BS01 rna N/A GO:0003723 ... Q4QBV0 40980996
    989337 9hl9:SW (2.5) BS02 MG N/A GO:0003723 ... Q4QBV0 40980996
    989338 9hl9:SX (2.5) BS01 rna N/A GO:0003735 ... E9AEE8 40980996
    989339 9hl9:SY (2.5) BS01 rna N/A GO:0000447 ... Q4QH01 40980996
    989340 9hl9:SZ (2.5) BS01 rna N/A GO:0002181 ... Q4Q1D2 40980996
    989341 9hl9:Sa (2.5) BS01 rna N/A GO:0003735 ... Q4Q9X4 40980996
    989342 9hl9:Sb (2.5) BS01 rna N/A GO:0003729 ... Q4Q8L6 40980996
    989343 9hl9:Sb (2.5) BS02 MG N/A GO:0003729 ... Q4Q8L6 40980996
    989344 9hl9:Sc (2.5) BS01 rna N/A GO:0003735 ... Q4Q140 40980996
    989345 9hl9:Sd (2.5) BS01 rna N/A GO:0000028 ... Q4Q931 40980996
    989346 9hl9:Se (2.5) BS01 rna N/A GO:0003735 ... Q4Q7P0 40980996
    989347 9hl9:Sf (2.5) BS01 rna N/A GO:0003729 ... Q4QFK7 40980996
    989348 9hl9:Sg (2.5) BS01 rna N/A GO:0005080 ... Q4Q7Y7 40980996
    989349 9hl9:Sh (2.5) BS01 rna N/A GO:0003676 ... Q4Q5K7 40980996
    989350 9hla:A (2.4) BS01 EUJ N/A GO:0001891 ... Q9GZU1 40532704
    989351 9hla:A (2.4) BS02 A1IV3 N/A GO:0001891 ... Q9GZU1 40532704
    989352 9hla:A (2.4) BS03 A1IV3 N/A GO:0001891 ... Q9GZU1 40532704
    989353 9hla:B (2.4) BS01 A1IV3 N/A GO:0001891 ... Q9GZU1 40532704
    989354 9hla:B (2.4) BS02 EUJ N/A GO:0001891 ... Q9GZU1 40532704
    989355 9hla:B (2.4) BS03 A1IV3 N/A GO:0001891 ... Q9GZU1 40532704
    989356 9hla:C (2.4) BS01 A1IV3 N/A GO:0001891 ... Q9GZU1 40532704
    989357 9hla:C (2.4) BS02 EUJ N/A GO:0001891 ... Q9GZU1 40532704
    989358 9hla:C (2.4) BS03 A1IV3 N/A GO:0001891 ... Q9GZU1 40532704
    989359 9hla:D (2.4) BS01 A1IV3 N/A GO:0001891 ... Q9GZU1 40532704
    989360 9hla:D (2.4) BS02 A1IV3 N/A GO:0001891 ... Q9GZU1 40532704
    989361 9hla:D (2.4) BS03 EUJ N/A GO:0001891 ... Q9GZU1 40532704
    989362 9hlb:A (2.1) BS01 EUJ N/A GO:0001891 ... Q9GZU1 40532704
    989363 9hlb:A (2.1) BS02 A1IV4 N/A GO:0001891 ... Q9GZU1 40532704
    989364 9hlb:A (2.1) BS03 A1IV4 N/A GO:0001891 ... Q9GZU1 40532704
    989365 9hlb:B (2.1) BS01 A1IV4 N/A GO:0001891 ... Q9GZU1 40532704
    989366 9hlb:B (2.1) BS02 A1IV4 N/A GO:0001891 ... Q9GZU1 40532704
    989367 9hlb:B (2.1) BS03 EUJ N/A GO:0001891 ... Q9GZU1 40532704
    989368 9hlb:C (2.1) BS01 EUJ N/A GO:0001891 ... Q9GZU1 40532704
    989369 9hlb:C (2.1) BS02 A1IV4 N/A GO:0001891 ... Q9GZU1 40532704
    989370 9hlb:C (2.1) BS03 A1IV4 N/A GO:0001891 ... Q9GZU1 40532704
    989371 9hlb:D (2.1) BS01 A1IV4 N/A GO:0001891 ... Q9GZU1 40532704
    989372 9hlb:D (2.1) BS02 A1IV4 N/A GO:0001891 ... Q9GZU1 40532704
    989373 9hlb:D (2.1) BS03 EUJ N/A GO:0001891 ... Q9GZU1 40532704
    989374 9hlc:A (2.1) BS01 EUJ N/A GO:0001891 ... Q9GZU1 40532704
    989375 9hlc:A (2.1) BS02 A1IV5 N/A GO:0001891 ... Q9GZU1 40532704
    989376 9hlc:A (2.1) BS03 A1IV5 N/A GO:0001891 ... Q9GZU1 40532704
    989377 9hlc:B (2.1) BS01 A1IV5 N/A GO:0001891 ... Q9GZU1 40532704
    989378 9hlc:B (2.1) BS02 EUJ N/A GO:0001891 ... Q9GZU1 40532704
    989379 9hlc:B (2.1) BS03 A1IV5 N/A GO:0001891 ... Q9GZU1 40532704
    989380 9hlc:C (2.1) BS01 A1IV5 N/A GO:0001891 ... Q9GZU1 40532704
    989381 9hlc:C (2.1) BS02 EUJ N/A GO:0001891 ... Q9GZU1 40532704
    989382 9hlc:C (2.1) BS03 A1IV5 N/A GO:0001891 ... Q9GZU1 40532704
    989383 9hlc:D (2.1) BS01 A1IV5 N/A GO:0001891 ... Q9GZU1 40532704
    989384 9hlc:D (2.1) BS02 A1IV5 N/A GO:0001891 ... Q9GZU1 40532704
    989385 9hlc:D (2.1) BS03 EUJ N/A GO:0001891 ... Q9GZU1 40532704
    989386 9hld:A (2.2) BS01 EUJ N/A GO:0001891 ... Q9GZU1 40532704
    989387 9hld:A (2.2) BS02 A1IV6 N/A GO:0001891 ... Q9GZU1 40532704
    989388 9hld:B (2.2) BS01 EUJ N/A GO:0001891 ... Q9GZU1 40532704
    989389 9hld:B (2.2) BS02 A1IV6 N/A GO:0001891 ... Q9GZU1 40532704
    989390 9hld:C (2.2) BS01 A1IV6 N/A GO:0001891 ... Q9GZU1 40532704
    989391 9hld:C (2.2) BS02 EUJ N/A GO:0001891 ... Q9GZU1 40532704
    989392 9hld:C (2.2) BS03 A1IV6 N/A GO:0001891 ... Q9GZU1 40532704
    989393 9hld:D (2.2) BS01 A1IV6 N/A GO:0001891 ... Q9GZU1 40532704
    989394 9hld:D (2.2) BS02 EUJ N/A GO:0001891 ... Q9GZU1 40532704
    989395 9hlf:A (2.64) BS01 A1IVU N/A GO:0000702 ... O08760 40294343
    989396 9hlg:A (2.0) BS01 A1IVV N/A N/A C7FH46 N/A
    989397 9hlg:A (2.0) BS02 CA N/A N/A C7FH46 N/A
    989398 9hlg:B (2.0) BS01 A1IVV N/A N/A C7FH46 N/A
    989399 9hlg:B (2.0) BS02 CA N/A N/A C7FH46 N/A
    989400 9hlg:C (2.0) BS01 A1IVV N/A N/A C7FH46 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).