SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    989401 9hlg:C (2.0) BS02 CA N/A N/A C7FH46 N/A
    989402 9hlg:D (2.0) BS01 A1IVV N/A N/A C7FH46 N/A
    989403 9hlg:D (2.0) BS02 CA N/A N/A C7FH46 N/A
    989404 9hlh:A (2.25) BS01 A1IVW N/A N/A E0V7D1 N/A
    989405 9hlh:A (2.25) BS02 CA N/A N/A E0V7D1 N/A
    989406 9hlh:B (2.25) BS01 A1IVW N/A N/A E0V7D1 N/A
    989407 9hlh:B (2.25) BS02 CA N/A N/A E0V7D1 N/A
    989408 9hlh:C (2.25) BS01 A1IVW N/A N/A E0V7D1 N/A
    989409 9hlh:C (2.25) BS02 CA N/A N/A E0V7D1 N/A
    989410 9hlh:D (2.25) BS01 A1IVW N/A N/A E0V7D1 N/A
    989411 9hlh:D (2.25) BS02 CA N/A N/A E0V7D1 N/A
    989412 9hli:A (2.0) BS01 A1IVX N/A N/A C7FH46 N/A
    989413 9hli:A (2.0) BS02 CA N/A N/A C7FH46 N/A
    989414 9hli:B (2.0) BS01 A1IVX N/A N/A C7FH46 N/A
    989415 9hli:B (2.0) BS02 CA N/A N/A C7FH46 N/A
    989416 9hli:C (2.0) BS01 A1IVX N/A N/A C7FH46 N/A
    989417 9hli:C (2.0) BS02 CA N/A N/A C7FH46 N/A
    989418 9hli:D (2.0) BS01 A1IVX N/A N/A C7FH46 N/A
    989419 9hli:D (2.0) BS02 CA N/A N/A C7FH46 N/A
    989420 9hlj:A (2.54) BS01 peptide N/A GO:0000139 ... A0A3S6RG30 40877317
    989421 9hlj:D (2.54) BS01 peptide N/A N/A N/A 40877317
    989422 9hlp:A (2.24) BS01 A1IV7 N/A N/A P54274 41266376
    989423 9hlq:A (2.5) BS01 HHQ N/A N/A P54274 41266376
    989424 9hlr:A (2.48) BS01 LL0 N/A N/A P54274 41266376
    989425 9hlt:A (2.16) BS01 UJK N/A N/A P54274 41266376
    989426 9hlt:A (2.16) BS02 UJK N/A N/A P54274 41266376
    989427 9hlu:A (2.23) BS01 UUG N/A N/A P54274 41266376
    989428 9hlu:A (2.23) BS02 UUG N/A N/A P54274 41266376
    989429 9hlw:A (2.66) BS01 BMA N/A GO:0004180 ... Q04609 40609945
    989430 9hlw:A (2.66) BS02 MAN N/A GO:0004180 ... Q04609 40609945
    989431 9hlw:A (2.66) BS03 ZN N/A GO:0004180 ... Q04609 40609945
    989432 9hlw:A (2.66) BS04 ZN N/A GO:0004180 ... Q04609 40609945
    989433 9hlw:A (2.66) BS05 CA N/A GO:0004180 ... Q04609 40609945
    989434 9hlw:E (2.66) BS01 BMA N/A GO:0004180 ... Q04609 40609945
    989435 9hlw:E (2.66) BS02 MAN N/A GO:0004180 ... Q04609 40609945
    989436 9hlw:E (2.66) BS03 ZN N/A GO:0004180 ... Q04609 40609945
    989437 9hlw:E (2.66) BS04 ZN N/A GO:0004180 ... Q04609 40609945
    989438 9hlw:E (2.66) BS05 CA N/A GO:0004180 ... Q04609 40609945
    989439 9hlx:A (3.8) BS01 rna N/A N/A N/A N/A
    989440 9hly:AaA (1.96) BS01 A1IV8 N/A GO:0006633 ... Q42561 N/A
    989441 9hly:BaB (1.96) BS01 A1IV8 N/A GO:0006633 ... Q42561 N/A
    989442 9hlz:00 (3.2) BS01 rna N/A GO:0003735 ... O14464 41339860
    989443 9hlz:1 (3.2) BS01 rna N/A GO:0003735 ... P32344 41339860
    989444 9hlz:1 (3.2) BS02 rna N/A GO:0003735 ... P32344 41339860
    989445 9hlz:11 (3.2) BS01 rna N/A GO:0003735 ... Q06678 41339860
    989446 9hlz:2 (3.2) BS01 rna N/A GO:0003735 ... P38783 41339860
    989447 9hlz:22 (3.2) BS01 rna N/A GO:0003735 ... P36527 41339860
    989448 9hlz:3 (3.2) BS01 rna N/A GO:0003735 ... P47141 41339860
    989449 9hlz:33 (3.2) BS01 rna N/A GO:0003735 ... P36526 41339860
    989450 9hlz:44 (3.2) BS01 rna N/A GO:0003735 ... Q06090 41339860
    989451 9hlz:5 (3.2) BS01 rna N/A GO:0003735 ... P12686 41339860
    989452 9hlz:55 (3.2) BS01 rna N/A GO:0003735 ... P36516 41339860
    989453 9hlz:6 (3.2) BS01 rna N/A GO:0003735 ... P53292 41339860
    989454 9hlz:66 (3.2) BS01 rna N/A GO:0003735 ... P36528 41339860
    989455 9hlz:7 (3.2) BS01 rna N/A GO:0003735 ... Q03430 41339860
    989456 9hlz:77 (3.2) BS01 rna N/A GO:0003735 ... P25642 41339860
    989457 9hlz:88 (3.2) BS01 rna N/A GO:0003735 ... Q02204 41339860
    989458 9hlz:99 (3.2) BS01 rna N/A GO:0003735 ... P36523 41339860
    989459 9hlz:A (3.2) BS01 rna N/A GO:0003735 ... Q02950 41339860
    989460 9hlz:B (3.2) BS01 rna N/A GO:0003735 ... P32902 41339860
    989461 9hlz:B (3.2) BS02 MG N/A GO:0003735 ... P32902 41339860
    989462 9hlz:BB (3.2) BS01 rna N/A GO:0003723 ... P32611 41339860
    989463 9hlz:C (3.2) BS01 rna N/A GO:0003735 ... P02381 41339860
    989464 9hlz:CC (3.2) BS01 rna N/A GO:0003735 ... P31334 41339860
    989465 9hlz:D (3.2) BS01 rna N/A GO:0003735 ... P27929 41339860
    989466 9hlz:DD (3.2) BS01 rna N/A GO:0003735 ... P51998 41339860
    989467 9hlz:E (3.2) BS01 rna N/A GO:0003735 ... P33759 41339860
    989468 9hlz:EE (3.2) BS01 rna N/A GO:0003723 ... P36519 41339860
    989469 9hlz:F (3.2) BS01 rna N/A GO:0003735 ... P28778 41339860
    989470 9hlz:FF (3.2) BS01 rna N/A GO:0003735 ... P32904 41339860
    989471 9hlz:G (3.2) BS01 rna N/A GO:0003729 ... P47150 41339860
    989472 9hlz:GG (3.2) BS01 rna N/A GO:0003735 ... P53724 41339860
    989473 9hlz:H (3.2) BS01 rna N/A GO:0003735 ... Q03799 41339860
    989474 9hlz:HH (3.2) BS01 rna N/A GO:0003729 ... Q12487 41339860
    989475 9hlz:I (3.2) BS01 rna N/A GO:0003723 ... P38120 41339860
    989476 9hlz:II (3.2) BS01 rna N/A GO:0003735 ... P35996 41339860
    989477 9hlz:II (3.2) BS02 rna N/A GO:0003735 ... P35996 41339860
    989478 9hlz:J (3.2) BS01 rna N/A GO:0003735 ... Q03201 41339860
    989479 9hlz:JJ (3.2) BS01 rna N/A GO:0003735 ... P36520 41339860
    989480 9hlz:K (3.2) BS01 rna N/A GO:0003735 ... P42847 41339860
    989481 9hlz:KK (3.2) BS01 rna N/A GO:0003735 ... P38064 41339860
    989482 9hlz:L (3.2) BS01 rna N/A GO:0003735 ... P53732 41339860
    989483 9hlz:LL (3.2) BS01 rna N/A GO:0003735 ... P22353 41339860
    989484 9hlz:M (3.2) BS01 rna N/A GO:0003735 ... P53937 41339860
    989485 9hlz:M (3.2) BS02 MG N/A GO:0003735 ... P53937 41339860
    989486 9hlz:MM (3.2) BS01 rna N/A GO:0003735 ... P25626 41339860
    989487 9hlz:MM (3.2) BS02 rna N/A GO:0003735 ... P25626 41339860
    989488 9hlz:N (3.2) BS01 rna N/A GO:0003735 ... P10663 41339860
    989489 9hlz:NN (3.2) BS01 rna N/A GO:0003735 ... P40858 41339860
    989490 9hlz:NN (3.2) BS02 MG N/A GO:0003735 ... P40858 41339860
    989491 9hlz:O (3.2) BS01 rna N/A GO:0003735 ... P21771 41339860
    989492 9hlz:O (3.2) BS02 rna N/A GO:0003735 ... P21771 41339860
    989493 9hlz:OO (3.2) BS01 rna N/A GO:0003735 ... P53881 41339860
    989494 9hlz:P (3.2) BS01 rna N/A GO:0003735 ... Q02608 41339860
    989495 9hlz:PP (3.2) BS01 rna N/A GO:0003735 ... P32387 41339860
    989496 9hlz:Q (3.2) BS01 rna N/A GO:0003735 ... Q03246 41339860
    989497 9hlz:QQ (3.2) BS01 rna N/A GO:0003735 ... P36534 41339860
    989498 9hlz:R (3.2) BS01 rna N/A GO:0003735 ... P40033 41339860
    989499 9hlz:RR (3.2) BS01 rna N/A GO:0003735 ... P12687 41339860
    989500 9hlz:S (3.2) BS01 rna N/A GO:0003735 ... P53733 41339860
    989501 9hlz:SS (3.2) BS01 rna N/A GO:0003735 ... P36525 41339860
    989502 9hlz:T (3.2) BS01 rna N/A GO:0003735 ... P38175 41339860
    989503 9hlz:TT (3.2) BS01 rna N/A GO:0003735 ... P36517 41339860
    989504 9hlz:U (3.2) BS01 rna N/A GO:0003735 ... P40496 41339860
    989505 9hlz:UU (3.2) BS01 rna N/A GO:0003735 ... P20084 41339860
    989506 9hlz:V (3.2) BS01 rna N/A GO:0003735 ... P17558 41339860
    989507 9hlz:VV (3.2) BS01 rna N/A GO:0003735 ... P36531 41339860
    989508 9hlz:W (3.2) BS01 rna N/A GO:0003735 ... Q01163 41339860
    989509 9hlz:W (3.2) BS02 GTP N/A GO:0003735 ... Q01163 41339860
    989510 9hlz:WW (3.2) BS01 rna N/A GO:0003735 ... P25348 41339860
    989511 9hlz:X (3.2) BS01 rna N/A GO:0003735 ... P53305 41339860
    989512 9hlz:XX (3.2) BS01 rna N/A GO:0003735 ... P36533 41339860
    989513 9hlz:Y (3.2) BS01 rna N/A GO:0003735 ... Q03976 41339860
    989514 9hlz:YY (3.2) BS01 rna N/A GO:0003735 ... Q04598 41339860
    989515 9hlz:Z (3.2) BS01 rna N/A GO:0003735 ... O75012 41339860
    989516 9hlz:ZZ (3.2) BS01 rna N/A GO:0003735 ... P53921 41339860
    989517 9hlz:aa (3.2) BS01 rna N/A GO:0003735 ... P22354 41339860
    989518 9hlz:bb (3.2) BS01 rna N/A GO:0003735 ... P23369 41339860
    989519 9hlz:cc (3.2) BS01 rna N/A GO:0003735 ... P14063 41339860
    989520 9hlz:dd (3.2) BS01 rna N/A GO:0000150 ... Q06630 41339860
    989521 9hm0:00 (3.0) BS01 rna N/A GO:0003735 ... O14464 41339860
    989522 9hm0:1 (3.0) BS01 rna N/A GO:0003735 ... P32344 41339860
    989523 9hm0:1 (3.0) BS02 rna N/A GO:0003735 ... P32344 41339860
    989524 9hm0:11 (3.0) BS01 rna N/A GO:0003735 ... Q06678 41339860
    989525 9hm0:2 (3.0) BS01 rna N/A GO:0003735 ... P38783 41339860
    989526 9hm0:22 (3.0) BS01 rna N/A GO:0003735 ... P36527 41339860
    989527 9hm0:3 (3.0) BS01 rna N/A GO:0003735 ... P47141 41339860
    989528 9hm0:33 (3.0) BS01 rna N/A GO:0003735 ... P36526 41339860
    989529 9hm0:44 (3.0) BS01 rna N/A GO:0003735 ... Q06090 41339860
    989530 9hm0:5 (3.0) BS01 rna N/A GO:0003735 ... P12686 41339860
    989531 9hm0:55 (3.0) BS01 rna N/A GO:0003735 ... P36516 41339860
    989532 9hm0:6 (3.0) BS01 rna N/A GO:0003735 ... P53292 41339860
    989533 9hm0:66 (3.0) BS01 rna N/A GO:0003735 ... P36528 41339860
    989534 9hm0:7 (3.0) BS01 rna N/A GO:0003735 ... Q03430 41339860
    989535 9hm0:77 (3.0) BS01 rna N/A GO:0003735 ... P25642 41339860
    989536 9hm0:88 (3.0) BS01 rna N/A GO:0003735 ... Q02204 41339860
    989537 9hm0:99 (3.0) BS01 rna N/A GO:0003735 ... P36523 41339860
    989538 9hm0:A (3.0) BS01 rna N/A GO:0003735 ... Q02950 41339860
    989539 9hm0:B (3.0) BS01 rna N/A GO:0003735 ... P32902 41339860
    989540 9hm0:B (3.0) BS02 MG N/A GO:0003735 ... P32902 41339860
    989541 9hm0:BB (3.0) BS01 rna N/A GO:0003723 ... P32611 41339860
    989542 9hm0:BB (3.0) BS02 rna N/A GO:0003723 ... P32611 41339860
    989543 9hm0:C (3.0) BS01 rna N/A GO:0003735 ... P02381 41339860
    989544 9hm0:CC (3.0) BS01 rna N/A GO:0003735 ... P31334 41339860
    989545 9hm0:D (3.0) BS01 rna N/A GO:0003735 ... P27929 41339860
    989546 9hm0:DD (3.0) BS01 rna N/A GO:0003735 ... P51998 41339860
    989547 9hm0:E (3.0) BS01 rna N/A GO:0003735 ... P33759 41339860
    989548 9hm0:EE (3.0) BS01 rna N/A GO:0003723 ... P36519 41339860
    989549 9hm0:F (3.0) BS01 rna N/A GO:0003735 ... P28778 41339860
    989550 9hm0:FF (3.0) BS01 rna N/A GO:0003735 ... P32904 41339860
    989551 9hm0:G (3.0) BS01 rna N/A GO:0003729 ... P47150 41339860
    989552 9hm0:GG (3.0) BS01 rna N/A GO:0003735 ... P53724 41339860
    989553 9hm0:H (3.0) BS01 rna N/A GO:0003735 ... Q03799 41339860
    989554 9hm0:HH (3.0) BS01 rna N/A GO:0003729 ... Q12487 41339860
    989555 9hm0:I (3.0) BS01 rna N/A GO:0003723 ... P38120 41339860
    989556 9hm0:II (3.0) BS01 rna N/A GO:0003735 ... P35996 41339860
    989557 9hm0:J (3.0) BS01 rna N/A GO:0003735 ... Q03201 41339860
    989558 9hm0:JJ (3.0) BS01 rna N/A GO:0003735 ... P36520 41339860
    989559 9hm0:K (3.0) BS01 rna N/A GO:0003735 ... P42847 41339860
    989560 9hm0:KK (3.0) BS01 rna N/A GO:0003735 ... P38064 41339860
    989561 9hm0:L (3.0) BS01 rna N/A GO:0003735 ... P53732 41339860
    989562 9hm0:L (3.0) BS02 MG N/A GO:0003735 ... P53732 41339860
    989563 9hm0:LL (3.0) BS01 rna N/A GO:0003735 ... P22353 41339860
    989564 9hm0:M (3.0) BS01 rna N/A GO:0003735 ... P53937 41339860
    989565 9hm0:M (3.0) BS02 MG N/A GO:0003735 ... P53937 41339860
    989566 9hm0:MM (3.0) BS01 rna N/A GO:0003735 ... P25626 41339860
    989567 9hm0:MM (3.0) BS02 rna N/A GO:0003735 ... P25626 41339860
    989568 9hm0:N (3.0) BS01 rna N/A GO:0003735 ... P10663 41339860
    989569 9hm0:NN (3.0) BS01 rna N/A GO:0003735 ... P40858 41339860
    989570 9hm0:O (3.0) BS01 rna N/A GO:0003735 ... P21771 41339860
    989571 9hm0:O (3.0) BS02 rna N/A GO:0003735 ... P21771 41339860
    989572 9hm0:OO (3.0) BS01 rna N/A GO:0003735 ... P53881 41339860
    989573 9hm0:P (3.0) BS01 rna N/A GO:0003735 ... Q02608 41339860
    989574 9hm0:PP (3.0) BS01 rna N/A GO:0003735 ... P32387 41339860
    989575 9hm0:Q (3.0) BS01 rna N/A GO:0003735 ... Q03246 41339860
    989576 9hm0:QQ (3.0) BS01 rna N/A GO:0003735 ... P36534 41339860
    989577 9hm0:R (3.0) BS01 rna N/A GO:0003735 ... P40033 41339860
    989578 9hm0:RR (3.0) BS01 rna N/A GO:0003735 ... P12687 41339860
    989579 9hm0:S (3.0) BS01 rna N/A GO:0003735 ... P53733 41339860
    989580 9hm0:SS (3.0) BS01 rna N/A GO:0003735 ... P36525 41339860
    989581 9hm0:T (3.0) BS01 rna N/A GO:0003735 ... P38175 41339860
    989582 9hm0:TT (3.0) BS01 rna N/A GO:0003735 ... P36517 41339860
    989583 9hm0:U (3.0) BS01 rna N/A GO:0003735 ... P40496 41339860
    989584 9hm0:UU (3.0) BS01 rna N/A GO:0003735 ... P20084 41339860
    989585 9hm0:V (3.0) BS01 rna N/A GO:0003735 ... P17558 41339860
    989586 9hm0:VV (3.0) BS01 rna N/A GO:0003735 ... P36531 41339860
    989587 9hm0:W (3.0) BS01 rna N/A GO:0003735 ... Q01163 41339860
    989588 9hm0:W (3.0) BS02 GTP N/A GO:0003735 ... Q01163 41339860
    989589 9hm0:W (3.0) BS03 MG N/A GO:0003735 ... Q01163 41339860
    989590 9hm0:WW (3.0) BS01 rna N/A GO:0003735 ... P25348 41339860
    989591 9hm0:X (3.0) BS01 rna N/A GO:0003735 ... P53305 41339860
    989592 9hm0:XX (3.0) BS01 rna N/A GO:0003735 ... P36533 41339860
    989593 9hm0:XX (3.0) BS02 rna N/A GO:0003735 ... P36533 41339860
    989594 9hm0:Y (3.0) BS01 rna N/A GO:0003735 ... Q03976 41339860
    989595 9hm0:YY (3.0) BS01 rna N/A GO:0003735 ... Q04598 41339860
    989596 9hm0:Z (3.0) BS01 rna N/A GO:0003735 ... O75012 41339860
    989597 9hm0:ZZ (3.0) BS01 rna N/A GO:0003735 ... P53921 41339860
    989598 9hm0:aa (3.0) BS01 rna N/A GO:0003735 ... P22354 41339860
    989599 9hm0:bb (3.0) BS01 rna N/A GO:0003735 ... P23369 41339860
    989600 9hm0:cc (3.0) BS01 rna N/A GO:0003735 ... P14063 41339860

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).