SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    989801 9hnq:A (3.81) BS01 ABU N/A N/A P31644 N/A
    989802 9hnq:B (3.81) BS01 ABU N/A N/A P28472 N/A
    989803 9hnq:E (3.81) BS01 ABU N/A N/A P28472 N/A
    989804 9hnr:B (3.17) BS01 ABU N/A N/A P28472 N/A
    989805 9hns:B (3.1) BS01 ABU N/A N/A P28472 N/A
    989806 9hns:E (3.1) BS01 ABU N/A N/A P28472 N/A
    989807 9hnt:A (3.32) BS01 V8D N/A N/A P31644 N/A
    989808 9hnt:B (3.32) BS01 V8D N/A N/A P28472 N/A
    989809 9hnt:B (3.32) BS02 ABU N/A N/A P28472 N/A
    989810 9hnt:D (3.32) BS01 ABU N/A N/A P31644 N/A
    989811 9hnt:E (3.32) BS01 V8D N/A N/A P28472 N/A
    989812 9hnt:E (3.32) BS02 ABU N/A N/A P28472 N/A
    989813 9hnw:A (3.04) BS01 ZN N/A GO:0004197 ... O94782 40739138
    989814 9hnx:AAA (1.35) BS01 ZN N/A GO:0004064 ... P00918 N/A
    989815 9hnx:AAA (1.35) BS02 A1IWH N/A GO:0004064 ... P00918 N/A
    989816 9hny:CE (3.3) BS01 rna N/A GO:0003735 ... Q38AX6 39896671
    989817 9hny:CF (3.3) BS01 rna N/A GO:0005737 ... Q38BW5 39896671
    989818 9hny:CH (3.3) BS01 rna N/A GO:0000314 ... Q388R7 39896671
    989819 9hny:CI (3.3) BS01 rna N/A GO:0003735 ... Q57W62 39896671
    989820 9hny:CK (3.3) BS01 rna N/A GO:0003735 ... Q389T7 39896671
    989821 9hny:CO (3.3) BS01 rna N/A GO:0005739 ... Q4GZ99 39896671
    989822 9hny:CP (3.3) BS01 rna N/A GO:0005737 ... Q384N9 39896671
    989823 9hny:CQ (3.3) BS01 rna N/A GO:0000314 ... Q38DP8 39896671
    989824 9hny:CR (3.3) BS01 rna N/A GO:0003723 ... Q38AS2 39896671
    989825 9hny:Ca (3.3) BS01 rna N/A GO:0005737 ... Q38DR3 39896671
    989826 9hny:Ca (3.3) BS02 peptide N/A GO:0005737 ... Q38DR3 39896671
    989827 9hny:Cd (3.3) BS01 rna N/A GO:0005739 ... Q38DK6 39896671
    989828 9hny:Cg (3.3) BS01 GTP N/A GO:0003735 ... Q585C2 39896671
    989829 9hny:Ci (3.3) BS01 rna N/A GO:0005739 ... Q57WW0 39896671
    989830 9hny:Cj (3.3) BS01 rna N/A GO:0005739 ... Q57UK0 39896671
    989831 9hny:Cp (3.3) BS01 rna N/A GO:0005739 ... Q389L3 39896671
    989832 9hny:DD (3.3) BS01 rna N/A GO:0000963 ... Q385L8 39896671
    989833 9hny:DF (3.3) BS01 rna N/A GO:0005737 ... Q38ET1 39896671
    989834 9hny:DG (3.3) BS01 rna N/A GO:0005634 ... Q57ZP8 39896671
    989835 9hny:DH (3.3) BS01 rna N/A GO:0003729 ... Q580V1 39896671
    989836 9hny:DJ (3.3) BS01 rna N/A GO:0005737 ... Q584U8 39896671
    989837 9hny:DL (3.3) BS01 rna N/A GO:0005739 ... Q38BS2 39896671
    989838 9hny:DP (3.3) BS01 rna N/A GO:0005737 ... Q38F25 39896671
    989839 9hny:DR (3.3) BS01 rna N/A GO:0005737 ... Q57UA2 39896671
    989840 9hny:DU (3.3) BS01 rna N/A GO:0005739 ... Q582T9 39896671
    989841 9hny:DV (3.3) BS01 rna N/A GO:0005739 ... Q57UZ6 39896671
    989842 9hny:DW (3.3) BS01 rna N/A GO:0005739 ... Q383N9 39896671
    989843 9hny:F1 (3.3) BS01 rna N/A GO:0003735 ... Q385R2 39896671
    989844 9hny:F1 (3.3) BS02 peptide N/A GO:0003735 ... Q385R2 39896671
    989845 9hny:F1 (3.3) BS03 SF4 N/A GO:0003735 ... Q385R2 39896671
    989846 9hny:F1 (3.3) BS04 SAM N/A GO:0003735 ... Q385R2 39896671
    989847 9hny:F2 (3.3) BS01 rna N/A GO:0001682 ... Q4GYS4 39896671
    989848 9hny:F2 (3.3) BS02 peptide N/A GO:0001682 ... Q4GYS4 39896671
    989849 9hny:F2 (3.3) BS03 peptide N/A GO:0001682 ... Q4GYS4 39896671
    989850 9hny:F3 (3.3) BS01 rna N/A GO:0005739 ... Q38E61 39896671
    989851 9hny:F3 (3.3) BS02 ACO N/A GO:0005739 ... Q38E61 39896671
    989852 9hny:F5 (3.3) BS01 peptide N/A GO:0000963 ... Q381K1 39896671
    989853 9hny:F6 (3.3) BS01 peptide N/A GO:0005739 ... Q38FQ8 39896671
    989854 9hny:F7 (3.3) BS01 rna N/A GO:0003729 ... Q57UW6 39896671
    989855 9hny:F7 (3.3) BS02 peptide N/A GO:0003729 ... Q57UW6 39896671
    989856 9hny:F7 (3.3) BS03 ACO N/A GO:0003729 ... Q57UW6 39896671
    989857 9hny:F8 (3.3) BS01 rna N/A GO:0005739 ... Q57W22 39896671
    989858 9hny:F9 (3.3) BS01 rna N/A GO:0005515 ... Q57YC0 39896671
    989859 9hny:FA (3.3) BS01 peptide N/A GO:0005739 ... Q386U1 39896671
    989860 9hny:FA (3.3) BS02 peptide N/A GO:0005739 ... Q386U1 39896671
    989861 9hny:FB (3.3) BS01 rna N/A GO:0001522 ... D0A0P7 39896671
    989862 9hny:FC (3.3) BS01 peptide N/A GO:0001522 ... D0A0P7 39896671
    989863 9hny:FE (3.3) BS01 rna N/A GO:0005739 ... Q384U7 39896671
    989864 9hny:FF (3.3) BS01 rna N/A GO:0005739 ... Q57W60 39896671
    989865 9hny:FF (3.3) BS02 peptide N/A GO:0005739 ... Q57W60 39896671
    989866 9hny:FF (3.3) BS03 SAM N/A GO:0005739 ... Q57W60 39896671
    989867 9hny:FG (3.3) BS01 rna N/A GO:0005737 ... Q387N4 39896671
    989868 9hny:FG (3.3) BS02 ZN N/A GO:0005737 ... Q387N4 39896671
    989869 9hny:FJ (3.3) BS01 rna N/A GO:0005739 ... Q383L9 39896671
    989870 9hny:FJ (3.3) BS02 peptide N/A GO:0005739 ... Q383L9 39896671
    989871 9hny:FL (3.3) BS01 rna N/A GO:0003824 ... Q57XC4 39896671
    989872 9hny:FL (3.3) BS02 ZN N/A GO:0003824 ... Q57XC4 39896671
    989873 9hny:FM (3.3) BS01 peptide N/A GO:0005739 ... Q57WY0 39896671
    989874 9hny:FO (3.3) BS01 rna N/A GO:0005737 ... Q389F9 39896671
    989875 9hny:FO (3.3) BS02 peptide N/A GO:0005737 ... Q389F9 39896671
    989876 9hny:FO (3.3) BS03 peptide N/A GO:0005737 ... Q389F9 39896671
    989877 9hny:FO (3.3) BS04 peptide N/A GO:0005737 ... Q389F9 39896671
    989878 9hny:FO (3.3) BS05 ACO N/A GO:0005737 ... Q389F9 39896671
    989879 9hny:FP (3.3) BS01 peptide N/A GO:0005737 ... Q382Z4 39896671
    989880 9hny:FQ (3.3) BS01 rna N/A GO:0005249 ... Q387P8 39896671
    989881 9hny:FR (3.3) BS01 rna N/A GO:0005249 ... Q387P8 39896671
    989882 9hny:FS (3.3) BS01 peptide N/A GO:0005249 ... Q387P8 39896671
    989883 9hny:FU (3.3) BS01 rna N/A GO:0005249 ... Q387P8 39896671
    989884 9hny:FV (3.3) BS01 peptide N/A GO:0005759 ... Q38C60 39896671
    989885 9hny:FW (3.3) BS01 rna N/A GO:0005739 ... Q38FI3 39896671
    989886 9hny:FX (3.3) BS01 peptide N/A GO:0005737 ... Q57YK5 39896671
    989887 9hny:FX (3.3) BS02 peptide N/A GO:0005737 ... Q57YK5 39896671
    989888 9hny:FY (3.3) BS01 rna N/A GO:0005739 ... Q584U9 39896671
    989889 9hny:Fa (3.3) BS01 rna N/A GO:0005739 ... Q57VU7 39896671
    989890 9hny:Fd (3.3) BS01 rna N/A GO:0005739 ... Q581T4 39896671
    989891 9hny:Fd (3.3) BS02 ZN N/A GO:0005739 ... Q581T4 39896671
    989892 9hny:Fe (3.3) BS01 ZN N/A GO:0005737 ... Q387L0 39896671
    989893 9hny:Fi (3.3) BS01 rna N/A GO:0005739 ... Q57ZP1 39896671
    989894 9hnz:A (2.4) BS01 peptide N/A N/A Q12797 41741441
    989895 9hnz:A (2.4) BS02 FE N/A N/A Q12797 41741441
    989896 9ho0:A (2.14) BS01 peptide N/A N/A Q12797 41741441
    989897 9ho0:A (2.14) BS02 FE N/A N/A Q12797 41741441
    989898 9ho1:A (1.85) BS01 peptide N/A N/A Q12797 41741441
    989899 9ho1:A (1.85) BS02 AKG N/A N/A Q12797 41741441
    989900 9ho1:A (1.85) BS03 FE N/A N/A Q12797 41741441
    989901 9ho2:A (1.83) BS01 peptide N/A N/A Q12797 41741441
    989902 9ho2:A (1.83) BS02 AKG N/A N/A Q12797 41741441
    989903 9ho2:A (1.83) BS03 FE N/A N/A Q12797 41741441
    989904 9ho3:A (2.39) BS01 peptide N/A N/A Q12797 41741441
    989905 9ho3:A (2.39) BS02 FE N/A N/A Q12797 41741441
    989906 9ho3:A (2.39) BS03 AKG N/A N/A Q12797 41741441
    989907 9ho7:A (1.69) BS01 HEM N/A GO:0004601 ... A0ABF7PHP1 40843530
    989908 9ho7:A (1.69) BS02 NO N/A GO:0004601 ... A0ABF7PHP1 40843530
    989909 9ho7:B (1.69) BS01 HEM N/A GO:0004601 ... A0ABF7PHP1 40843530
    989910 9ho7:B (1.69) BS02 NO N/A GO:0004601 ... A0ABF7PHP1 40843530
    989911 9ho7:C (1.69) BS01 HEM N/A GO:0004601 ... A0ABF7PHP1 40843530
    989912 9ho7:C (1.69) BS02 NO N/A GO:0004601 ... A0ABF7PHP1 40843530
    989913 9ho7:D (1.69) BS01 HEM N/A GO:0004601 ... A0ABF7PHP1 40843530
    989914 9ho7:D (1.69) BS02 NO N/A GO:0004601 ... A0ABF7PHP1 40843530
    989915 9ho7:E (1.69) BS01 HEM N/A GO:0004601 ... A0ABF7PHP1 40843530
    989916 9ho7:E (1.69) BS02 NO N/A GO:0004601 ... A0ABF7PHP1 40843530
    989917 9ho7:F (1.69) BS01 HEM N/A GO:0004601 ... A0ABF7PHP1 40843530
    989918 9ho7:F (1.69) BS02 NO N/A GO:0004601 ... A0ABF7PHP1 40843530
    989919 9hp8:A (3.7) BS01 rna N/A GO:0004519 ... G3ECR1 41702403
    989920 9hp8:A (3.7) BS02 rna N/A GO:0004519 ... G3ECR1 41702403
    989921 9hp8:A (3.7) BS03 dna N/A GO:0004519 ... G3ECR1 41702403
    989922 9hp8:A (3.7) BS04 dna N/A GO:0004519 ... G3ECR1 41702403
    989923 9hp8:F (3.7) BS01 peptide N/A GO:0004519 ... G3ECR2 41702403
    989924 9hp9:A (3.39) BS01 rna N/A GO:0004519 ... G3ECR1 41702403
    989925 9hp9:A (3.39) BS02 rna N/A GO:0004519 ... G3ECR1 41702403
    989926 9hp9:A (3.39) BS03 dna N/A GO:0004519 ... G3ECR1 41702403
    989927 9hp9:A (3.39) BS04 dna N/A GO:0004519 ... G3ECR1 41702403
    989928 9hp9:F (3.39) BS01 peptide N/A GO:0004519 ... G3ECR2 41702403
    989929 9hpb:A (2.43) BS01 MG N/A GO:0004615 ... Q9Z2M7 N/A
    989930 9hpb:A (2.43) BS02 MG N/A GO:0004615 ... Q9Z2M7 N/A
    989931 9hpb:B (2.43) BS01 MG N/A GO:0004615 ... Q9Z2M7 N/A
    989932 9hpb:B (2.43) BS02 MG N/A GO:0004615 ... Q9Z2M7 N/A
    989933 9hpb:C (2.43) BS01 MG N/A GO:0004615 ... Q9Z2M7 N/A
    989934 9hpb:D (2.43) BS01 MG N/A GO:0004615 ... Q9Z2M7 N/A
    989935 9hpb:D (2.43) BS02 MG N/A GO:0004615 ... Q9Z2M7 N/A
    989936 9hpb:E (2.43) BS01 MG N/A GO:0004615 ... Q9Z2M7 N/A
    989937 9hpb:E (2.43) BS02 MG N/A GO:0004615 ... Q9Z2M7 N/A
    989938 9hpb:F (2.43) BS01 MG N/A GO:0004615 ... Q9Z2M7 N/A
    989939 9hpb:F (2.43) BS02 MG N/A GO:0004615 ... Q9Z2M7 N/A
    989940 9hph:A (2.16) BS01 A1IWI N/A GO:0004672 ... P68400 40493957
    989941 9hph:B (2.16) BS01 A1IWI N/A GO:0004672 ... P68400 40493957
    989942 9hpi:B (2.93) BS01 ZN N/A GO:0005515 ... Q96SW2 41258141
    989943 9hpi:B (2.93) BS02 A1IW1 N/A GO:0005515 ... Q96SW2 41258141
    989944 9hpi:B (2.93) BS03 A1IW1 N/A GO:0005515 ... Q96SW2 41258141
    989945 9hpi:C (2.93) BS01 A1IW1 N/A GO:0005515 ... Q96SW2 41258141
    989946 9hpi:C (2.93) BS02 ZN N/A GO:0005515 ... Q96SW2 41258141
    989947 9hpi:C (2.93) BS03 A1IW1 N/A GO:0005515 ... Q96SW2 41258141
    989948 9hpj:B (3.1) BS01 ZN N/A GO:0005515 ... Q96SW2 41258141
    989949 9hpj:B (3.1) BS02 A1IW1 N/A GO:0005515 ... Q96SW2 41258141
    989950 9hpj:B (3.1) BS03 A1IW1 N/A GO:0005515 ... Q96SW2 41258141
    989951 9hpj:C (3.1) BS01 A1IW1 N/A GO:0005515 ... Q96SW2 41258141
    989952 9hpj:C (3.1) BS02 ZN N/A GO:0005515 ... Q96SW2 41258141
    989953 9hpj:C (3.1) BS03 A1IW1 N/A GO:0005515 ... Q96SW2 41258141
    989954 9hpo:A (3.5) BS01 ADP N/A GO:0000492 ... Q9Y265 41667496
    989955 9hpo:B (3.5) BS01 ADP N/A GO:0000492 ... Q9Y265 41667496
    989956 9hpo:C (3.5) BS01 ADP N/A GO:0000492 ... Q9Y265 41667496
    989957 9hpo:D (3.5) BS01 ADP N/A GO:0000492 ... Q9Y230 41667496
    989958 9hpo:E (3.5) BS01 ADP N/A GO:0000492 ... Q9Y230 41667496
    989959 9hpo:F (3.5) BS01 ADP N/A GO:0000492 ... Q9Y230 41667496
    989960 9hpo:G (3.5) BS01 ADP N/A GO:0000492 ... Q9Y265 41667496
    989961 9hpo:H (3.5) BS01 ADP N/A GO:0000492 ... Q9Y265 41667496
    989962 9hpo:I (3.5) BS01 ADP N/A GO:0000492 ... Q9Y265 41667496
    989963 9hpo:J (3.5) BS01 ADP N/A GO:0000492 ... Q9Y230 41667496
    989964 9hpo:K (3.5) BS01 ADP N/A GO:0000492 ... Q9Y230 41667496
    989965 9hpo:L (3.5) BS01 ADP N/A GO:0000492 ... Q9Y230 41667496
    989966 9hpq:A (2.17) BS01 peptide N/A N/A P13674 40386874
    989967 9hpq:A (2.17) BS02 MG N/A N/A P13674 40386874
    989968 9hpq:B (2.17) BS01 peptide N/A N/A P13674 40386874
    989969 9hpq:C (2.17) BS01 MG N/A N/A P13674 40386874
    989970 9hpq:D (2.17) BS01 peptide N/A N/A P13674 40386874
    989971 9hps:A (1.95) BS01 peptide N/A GO:0042981 ... Q07817 41145501
    989972 9hpv:A (1.41) BS01 OP0 N/A GO:0005886 ... A0A6G4MVF1 40927637
    989973 9hpv:A (1.41) BS02 A1IYS N/A GO:0005886 ... A0A6G4MVF1 40927637
    989974 9hpv:B (1.41) BS01 OP0 N/A GO:0005886 ... A0A6G4MVF1 40927637
    989975 9hpv:B (1.41) BS02 A1IYS N/A GO:0005886 ... A0A6G4MVF1 40927637
    989976 9hpw:A (2.42) BS01 MER N/A GO:0008800 ... Q6ZZZ2 N/A
    989977 9hpx:A (0.96) BS01 SF4 N/A GO:0008901 ... P07598 N/A
    989978 9hpx:A (0.96) BS02 SF4 N/A GO:0008901 ... P07598 N/A
    989979 9hpx:A (0.96) BS03 SF4 N/A GO:0008901 ... P07598 N/A
    989980 9hpx:A (0.96) BS04 A1IW2 N/A GO:0008901 ... P07598 N/A
    989981 9hpy:A (2.48) BS01 NXL N/A GO:0008800 ... Q6ZZZ2 N/A
    989982 9hq0:A (2.13) BS01 A1IW3 N/A N/A Q6SZW1 N/A
    989983 9hq0:B (2.13) BS01 A1IW3 N/A N/A Q6SZW1 N/A
    989984 9hq1:A (1.8) BS01 A1IWM N/A N/A Q8A622 40894706
    989985 9hq1:B (1.8) BS01 A1IWM N/A N/A Q8A622 40894706
    989986 9hq1:B (1.8) BS02 CA N/A N/A Q8A622 40894706
    989987 9hq3:AAA (1.5) BS01 ZN N/A GO:0004064 ... P00918 N/A
    989988 9hq3:AAA (1.5) BS02 A1IWY N/A GO:0004064 ... P00918 N/A
    989989 9hq4:A (3.28) BS01 G2P N/A GO:0000226 ... P68363 40834096
    989990 9hq4:B (3.28) BS01 G2P N/A GO:0000226 ... P07437 40834096
    989991 9hq4:B (3.28) BS02 TA1 N/A GO:0000226 ... P07437 40834096
    989992 9hq4:C (3.28) BS01 G2P N/A GO:0000226 ... P68363 40834096
    989993 9hq4:D (3.28) BS01 G2P N/A GO:0000226 ... P07437 40834096
    989994 9hq4:D (3.28) BS02 TA1 N/A GO:0000226 ... P07437 40834096
    989995 9hq6:A (1.51) BS01 BM0 N/A GO:0004322 ... P02794 40249912
    989996 9hq6:B (1.51) BS01 BM0 N/A GO:0004322 ... P02794 40249912
    989997 9hq6:C (1.51) BS01 BM0 N/A GO:0004322 ... P02794 40249912
    989998 9hq6:D (1.51) BS01 BM0 N/A GO:0004322 ... P02794 40249912
    989999 9hq6:E (1.51) BS01 BM0 N/A GO:0004322 ... P02794 40249912
    990000 9hq6:F (1.51) BS01 BM0 N/A GO:0004322 ... P02794 40249912

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).