SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 4942 4943 4944 4945 4946 4947 4948 4949 4950 4951 4952 4953 4954 4955 4956 4957 4958 4959 4960 4961 4962 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    990201 9hqv:Yb (2.52) BS01 rna N/A N/A S8G6E6 39827269
    990202 9hqv:Yb (2.52) BS02 rna N/A N/A S8G6E6 39827269
    990203 9hqv:Yc (2.52) BS01 rna N/A N/A S8GJU2 39827269
    990204 9hqv:Yc (2.52) BS02 rna N/A N/A S8GJU2 39827269
    990205 9hqv:Yc (2.52) BS03 rna N/A N/A S8GJU2 39827269
    990206 9hqv:Yd (2.52) BS01 rna N/A N/A S8GGX8 39827269
    990207 9hqv:Ye (2.52) BS01 peptide N/A N/A A0A125YYT2 39827269
    990208 9hqv:Ye (2.52) BS02 rna N/A N/A A0A125YYT2 39827269
    990209 9hqv:Ye (2.52) BS03 rna N/A N/A A0A125YYT2 39827269
    990210 9hqv:Yf (2.52) BS01 rna N/A N/A S8GKJ3 39827269
    990211 9hqv:Yf (2.52) BS02 rna N/A N/A S8GKJ3 39827269
    990212 9hqv:Yf (2.52) BS03 rna N/A N/A S8GKJ3 39827269
    990213 9hqv:Yf (2.52) BS04 rna N/A N/A S8GKJ3 39827269
    990214 9hqv:Yf (2.52) BS05 rna N/A N/A S8GKJ3 39827269
    990215 9hqv:Yg (2.52) BS01 rna N/A N/A S8F8D3 39827269
    990216 9hqv:Yg (2.52) BS02 rna N/A N/A S8F8D3 39827269
    990217 9hqv:Yg (2.52) BS03 rna N/A N/A S8F8D3 39827269
    990218 9hqv:Yg (2.52) BS04 rna N/A N/A S8F8D3 39827269
    990219 9hqv:Yg (2.52) BS05 rna N/A N/A S8F8D3 39827269
    990220 9hqv:Yh (2.52) BS01 rna N/A N/A A0A0F7VBJ0 39827269
    990221 9hqv:Yh (2.52) BS02 rna N/A N/A A0A0F7VBJ0 39827269
    990222 9hqv:Yh (2.52) BS03 rna N/A N/A A0A0F7VBJ0 39827269
    990223 9hqv:Yh (2.52) BS04 rna N/A N/A A0A0F7VBJ0 39827269
    990224 9hqv:Yh (2.52) BS05 rna N/A N/A A0A0F7VBJ0 39827269
    990225 9hqv:Yi (2.52) BS01 rna N/A N/A S8G3J1 39827269
    990226 9hqv:Yj (2.52) BS01 rna N/A N/A A0A125YYG6 39827269
    990227 9hqv:Yj (2.52) BS02 rna N/A N/A A0A125YYG6 39827269
    990228 9hqv:Yj (2.52) BS03 rna N/A N/A A0A125YYG6 39827269
    990229 9hqv:Yj (2.52) BS04 rna N/A N/A A0A125YYG6 39827269
    990230 9hqv:Yk (2.52) BS01 peptide N/A N/A S8GUD6 39827269
    990231 9hqv:Yk (2.52) BS02 rna N/A N/A S8GUD6 39827269
    990232 9hqv:Yk (2.52) BS03 rna N/A N/A S8GUD6 39827269
    990233 9hqv:Yl (2.52) BS01 rna N/A N/A S8GU15 39827269
    990234 9hqv:Ym (2.52) BS01 peptide N/A N/A S8F0U0 39827269
    990235 9hqv:Ym (2.52) BS02 rna N/A N/A S8F0U0 39827269
    990236 9hqv:Yn (2.52) BS01 rna N/A N/A S8G8E7 39827269
    990237 9hqv:Yn (2.52) BS02 rna N/A N/A S8G8E7 39827269
    990238 9hqv:Yn (2.52) BS03 rna N/A N/A S8G8E7 39827269
    990239 9hqv:Yn (2.52) BS04 rna N/A N/A S8G8E7 39827269
    990240 9hqv:Yn (2.52) BS05 rna N/A N/A S8G8E7 39827269
    990241 9hqv:Yn (2.52) BS06 rna N/A N/A S8G8E7 39827269
    990242 9hqv:Yo (2.52) BS01 rna N/A N/A A0A125YG13 39827269
    990243 9hqv:Yo (2.52) BS02 rna N/A N/A A0A125YG13 39827269
    990244 9hqv:Yp (2.52) BS01 peptide N/A N/A S8G684 39827269
    990245 9hqv:Yp (2.52) BS02 rna N/A N/A S8G684 39827269
    990246 9hqv:Yp (2.52) BS03 rna N/A N/A S8G684 39827269
    990247 9hqv:Yp (2.52) BS04 rna N/A N/A S8G684 39827269
    990248 9hqv:Yp (2.52) BS05 ZN N/A N/A S8G684 39827269
    990249 9hqv:Yq (2.52) BS01 rna N/A N/A A0A125YMK3 39827269
    990250 9hqv:Yr (2.52) BS01 rna N/A N/A A0A125YXT1 39827269
    990251 9hqv:Yr (2.52) BS02 rna N/A N/A A0A125YXT1 39827269
    990252 9hqv:Yr (2.52) BS03 rna N/A N/A A0A125YXT1 39827269
    990253 9hqv:Yr (2.52) BS04 rna N/A N/A A0A125YXT1 39827269
    990254 9hqv:Ys (2.52) BS01 rna N/A N/A S8GML4 39827269
    990255 9hqv:Ys (2.52) BS02 rna N/A N/A S8GML4 39827269
    990256 9hqv:Ys (2.52) BS03 rna N/A N/A S8GML4 39827269
    990257 9hqv:Ys (2.52) BS04 rna N/A N/A S8GML4 39827269
    990258 9hqv:Yt (2.52) BS01 rna N/A N/A S8EW95 39827269
    990259 9hqv:Yu (2.52) BS01 rna N/A N/A N/A 39827269
    990260 9hqv:Yu (2.52) BS02 rna N/A N/A N/A 39827269
    990261 9hqv:Yu (2.52) BS03 rna N/A N/A N/A 39827269
    990262 9hqv:Yu (2.52) BS04 rna N/A N/A N/A 39827269
    990263 9hqv:Yv (2.52) BS01 rna N/A N/A S8GBT4 39827269
    990264 9hqv:Yv (2.52) BS02 rna N/A N/A S8GBT4 39827269
    990265 9hqv:Yv (2.52) BS03 rna N/A N/A S8GBT4 39827269
    990266 9hqx:B (3.08) BS01 dna N/A N/A A0A3G3DSI6 41087596
    990267 9hqx:B (3.08) BS02 dna N/A N/A A0A3G3DSI6 41087596
    990268 9hqx:d (3.08) BS01 dna N/A N/A A0A3G3DTV8 41087596
    990269 9hqz:A (2.0) BS01 MG N/A GO:0016114 ... A7NH01 41372098
    990270 9hqz:A (2.0) BS02 MG N/A GO:0016114 ... A7NH01 41372098
    990271 9hqz:A (2.0) BS03 MG N/A GO:0016114 ... A7NH01 41372098
    990272 9hqz:A (2.0) BS04 POP N/A GO:0016114 ... A7NH01 41372098
    990273 9hqz:A (2.0) BS05 FAR N/A GO:0016114 ... A7NH01 41372098
    990274 9hqz:B (2.0) BS01 BU3 N/A GO:0016114 ... A7NH01 41372098
    990275 9hr0:A (2.05) BS01 MG N/A GO:0016114 ... A7NH01 41372098
    990276 9hr0:A (2.05) BS02 MG N/A GO:0016114 ... A7NH01 41372098
    990277 9hr0:A (2.05) BS03 MG N/A GO:0016114 ... A7NH01 41372098
    990278 9hr0:A (2.05) BS04 POP N/A GO:0016114 ... A7NH01 41372098
    990279 9hr0:A (2.05) BS05 A1IW0 N/A GO:0016114 ... A7NH01 41372098
    990280 9hr0:B (2.05) BS01 MG N/A GO:0016114 ... A7NH01 41372098
    990281 9hr0:B (2.05) BS02 MG N/A GO:0016114 ... A7NH01 41372098
    990282 9hr0:B (2.05) BS03 MG N/A GO:0016114 ... A7NH01 41372098
    990283 9hr0:B (2.05) BS04 POP N/A GO:0016114 ... A7NH01 41372098
    990284 9hr0:B (2.05) BS05 A1IW0 N/A GO:0016114 ... A7NH01 41372098
    990285 9hr3:A (2.1) BS01 MG N/A GO:0016114 ... A7NH01 41372098
    990286 9hr3:A (2.1) BS02 MG N/A GO:0016114 ... A7NH01 41372098
    990287 9hr3:A (2.1) BS03 MG N/A GO:0016114 ... A7NH01 41372098
    990288 9hr3:A (2.1) BS04 POP N/A GO:0016114 ... A7NH01 41372098
    990289 9hr3:A (2.1) BS05 A1IWZ N/A GO:0016114 ... A7NH01 41372098
    990290 9hr3:A (2.1) BS06 BU3 N/A GO:0016114 ... A7NH01 41372098
    990291 9hr3:B (2.1) BS01 BU3 N/A GO:0016114 ... A7NH01 41372098
    990292 9hr3:B (2.1) BS02 MG N/A GO:0016114 ... A7NH01 41372098
    990293 9hr3:B (2.1) BS03 MG N/A GO:0016114 ... A7NH01 41372098
    990294 9hr3:B (2.1) BS04 MG N/A GO:0016114 ... A7NH01 41372098
    990295 9hr3:B (2.1) BS05 POP N/A GO:0016114 ... A7NH01 41372098
    990296 9hr3:B (2.1) BS06 A1IWZ N/A GO:0016114 ... A7NH01 41372098
    990297 9hr5:A (3.26) BS01 dna N/A N/A A0A3G3DTP5 41087596
    990298 9hr5:A (3.26) BS02 dna N/A N/A A0A3G3DTP5 41087596
    990299 9hr5:C (3.26) BS01 dna N/A N/A A0A3G3DTP5 41087596
    990300 9hr5:C (3.26) BS02 dna N/A N/A A0A3G3DTP5 41087596
    990301 9hra:A (2.48) BS01 PYR N/A GO:0000287 ... Q83DG5 40250561
    990302 9hra:B (2.48) BS01 PYR N/A GO:0000287 ... Q83DG5 40250561
    990303 9hra:D (2.48) BS01 PYR N/A GO:0000287 ... Q83DG5 40250561
    990304 9hra:F (2.48) BS01 PYR N/A GO:0000287 ... Q83DG5 40250561
    990305 9hra:G (2.48) BS01 PYR N/A GO:0000287 ... Q83DG5 40250561
    990306 9hra:I (2.48) BS01 PYR N/A GO:0000287 ... Q83DG5 40250561
    990307 9hra:J (2.48) BS01 PYR N/A GO:0000287 ... Q83DG5 40250561
    990308 9hra:L (2.48) BS01 PYR N/A GO:0000287 ... Q83DG5 40250561
    990309 9hrb:B (1.9) BS01 MG N/A N/A N/A N/A
    990310 9hrc:A (3.161) BS01 ZN N/A GO:0004672 ... Q9HBH9 40033556
    990311 9hrc:A (3.161) BS02 A1IWO N/A GO:0004672 ... Q9HBH9 40033556
    990312 9hre:A (2.05) BS01 peptide N/A N/A P13674 40386874
    990313 9hre:A (2.05) BS02 MG N/A N/A P13674 40386874
    990314 9hre:B (2.05) BS01 peptide N/A N/A P13674 40386874
    990315 9hre:B (2.05) BS02 GLY N/A N/A P13674 40386874
    990316 9hre:C (2.05) BS01 MG N/A N/A P13674 40386874
    990317 9hre:D (2.05) BS01 peptide N/A N/A P13674 40386874
    990318 9hre:D (2.05) BS02 GLY N/A N/A P13674 40386874
    990319 9hrk:A (1.33) BS01 HEC N/A N/A G1UBD9 40822104
    990320 9hrk:B (1.33) BS01 HEC N/A N/A G1UBD9 40822104
    990321 9hrt:A (2.3) BS01 A1IXH N/A N/A Q9NZQ7 40666457
    990322 9hrt:B (2.3) BS01 A1IXH N/A N/A Q9NZQ7 40666457
    990323 9hru:A (1.88) BS01 A1IXG N/A GO:0003796 ... P00698 40694812
    990324 9hru:B (1.88) BS01 A1IXG N/A GO:0003796 ... P00698 40694812
    990325 9hrv:A (1.04) BS01 BDF N/A N/A A0AAP7ZHZ3 40694812
    990326 9hrv:A (1.04) BS02 BDF N/A N/A A0AAP7ZHZ3 40694812
    990327 9hrv:A (1.04) BS03 A1IXG N/A N/A A0AAP7ZHZ3 40694812
    990328 9hrw:A (1.07) BS01 BDF N/A N/A A0AAP7ZHZ3 40694812
    990329 9hrw:A (1.07) BS02 BDF N/A N/A A0AAP7ZHZ3 40694812
    990330 9hrw:A (1.07) BS03 A1IXG N/A N/A A0AAP7ZHZ3 40694812
    990331 9hrw:B (1.07) BS01 BDF N/A N/A A0AAP7ZHZ3 40694812
    990332 9hrw:B (1.07) BS02 BDF N/A N/A A0AAP7ZHZ3 40694812
    990333 9hrw:B (1.07) BS03 A1IXG N/A N/A A0AAP7ZHZ3 40694812
    990334 9hrx:A (1.49) BS01 A1IXG N/A N/A A0AAP7ZHZ3 40694812
    990335 9hrx:A (1.49) BS02 BDF N/A N/A A0AAP7ZHZ3 40694812
    990336 9hrx:A (1.49) BS03 BDF N/A N/A A0AAP7ZHZ3 40694812
    990337 9hrx:B (1.49) BS01 BDF N/A N/A A0AAP7ZHZ3 40694812
    990338 9hrx:B (1.49) BS02 BDF N/A N/A A0AAP7ZHZ3 40694812
    990339 9hrx:B (1.49) BS03 A1IXG N/A N/A A0AAP7ZHZ3 40694812
    990340 9hry:A (1.5) BS01 BDF N/A N/A A0AAP7ZHZ3 40694812
    990341 9hry:A (1.5) BS02 BDF N/A N/A A0AAP7ZHZ3 40694812
    990342 9hry:A (1.5) BS03 A1IXG N/A N/A A0AAP7ZHZ3 40694812
    990343 9hry:A (1.5) BS04 A1IXG N/A N/A A0AAP7ZHZ3 40694812
    990344 9hry:A (1.5) BS05 BDF N/A N/A A0AAP7ZHZ3 40694812
    990345 9hry:B (1.5) BS01 BDF N/A N/A A0AAP7ZHZ3 40694812
    990346 9hry:B (1.5) BS02 BDF N/A N/A A0AAP7ZHZ3 40694812
    990347 9hry:B (1.5) BS03 BDF N/A N/A A0AAP7ZHZ3 40694812
    990348 9hry:B (1.5) BS04 A1IXG N/A N/A A0AAP7ZHZ3 40694812
    990349 9hry:B (1.5) BS05 A1IXG N/A N/A A0AAP7ZHZ3 40694812
    990350 9hry:C (1.5) BS01 A1IXG N/A N/A A0AAP7ZHZ3 40694812
    990351 9hry:C (1.5) BS02 BDF N/A N/A A0AAP7ZHZ3 40694812
    990352 9hry:C (1.5) BS03 BDF N/A N/A A0AAP7ZHZ3 40694812
    990353 9hry:C (1.5) BS04 BDF N/A N/A A0AAP7ZHZ3 40694812
    990354 9hry:C (1.5) BS05 A1IXG N/A N/A A0AAP7ZHZ3 40694812
    990355 9hry:D (1.5) BS01 BDF N/A N/A A0AAP7ZHZ3 40694812
    990356 9hry:D (1.5) BS02 BDF N/A N/A A0AAP7ZHZ3 40694812
    990357 9hry:D (1.5) BS03 A1IXG N/A N/A A0AAP7ZHZ3 40694812
    990358 9hry:D (1.5) BS04 A1IXG N/A N/A A0AAP7ZHZ3 40694812
    990359 9hry:D (1.5) BS05 BDF N/A N/A A0AAP7ZHZ3 40694812
    990360 9hry:E (1.5) BS01 BDF N/A N/A A0AAP7ZHZ3 40694812
    990361 9hry:E (1.5) BS02 BDF N/A N/A A0AAP7ZHZ3 40694812
    990362 9hry:E (1.5) BS03 BDF N/A N/A A0AAP7ZHZ3 40694812
    990363 9hry:E (1.5) BS04 A1IXG N/A N/A A0AAP7ZHZ3 40694812
    990364 9hry:E (1.5) BS05 A1IXG N/A N/A A0AAP7ZHZ3 40694812
    990365 9hry:F (1.5) BS01 A1IXG N/A N/A A0AAP7ZHZ3 40694812
    990366 9hry:F (1.5) BS02 BDF N/A N/A A0AAP7ZHZ3 40694812
    990367 9hry:F (1.5) BS03 BDF N/A N/A A0AAP7ZHZ3 40694812
    990368 9hry:F (1.5) BS04 BDF N/A N/A A0AAP7ZHZ3 40694812
    990369 9hry:F (1.5) BS05 A1IXG N/A N/A A0AAP7ZHZ3 40694812
    990370 9hrz:A (1.49) BS01 BDF N/A N/A A0AAP7ZHZ3 40694812
    990371 9hrz:A (1.49) BS02 BDF N/A N/A A0AAP7ZHZ3 40694812
    990372 9hrz:A (1.49) BS03 A1IXG N/A N/A A0AAP7ZHZ3 40694812
    990373 9hs0:A (1.3) BS01 CU N/A GO:0005507 ... Q89EJ6 40381977
    990374 9hs0:A (1.3) BS02 CU N/A GO:0005507 ... Q89EJ6 40381977
    990375 9hs1:A (2.36) BS01 0O2 N/A GO:0005829 ... P0ADR8 41197623
    990376 9hs1:A (2.36) BS02 0O2 N/A GO:0005829 ... P0ADR8 41197623
    990377 9hs1:B (2.36) BS01 0O2 N/A GO:0005829 ... P0ADR8 41197623
    990378 9hs1:B (2.36) BS02 0O2 N/A GO:0005829 ... P0ADR8 41197623
    990379 9hs1:C (2.36) BS01 0O2 N/A GO:0005829 ... P0ADR8 41197623
    990380 9hs1:D (2.36) BS01 0O2 N/A GO:0005829 ... P0ADR8 41197623
    990381 9hs1:D (2.36) BS02 HSX N/A GO:0005829 ... P0ADR8 41197623
    990382 9hs2:A (3.4) BS01 G4P N/A GO:0005829 ... P0ADR8 41197623
    990383 9hs2:A (3.4) BS02 A1IXI N/A GO:0005829 ... P0ADR8 41197623
    990384 9hs2:A (3.4) BS03 G4P N/A GO:0005829 ... P0ADR8 41197623
    990385 9hs2:B (3.4) BS01 G4P N/A GO:0005829 ... P0ADR8 41197623
    990386 9hs2:B (3.4) BS02 G4P N/A GO:0005829 ... P0ADR8 41197623
    990387 9hs2:B (3.4) BS03 A1IXI N/A GO:0005829 ... P0ADR8 41197623
    990388 9hs2:C (3.4) BS01 A1IXI N/A GO:0005829 ... P0ADR8 41197623
    990389 9hs2:C (3.4) BS02 G4P N/A GO:0005829 ... P0ADR8 41197623
    990390 9hs2:C (3.4) BS03 G4P N/A GO:0005829 ... P0ADR8 41197623
    990391 9hs2:D (3.4) BS01 G4P N/A GO:0005829 ... P0ADR8 41197623
    990392 9hs2:D (3.4) BS02 G4P N/A GO:0005829 ... P0ADR8 41197623
    990393 9hs3:A (3.4) BS01 HSX N/A GO:0005829 ... P0ADR8 41197623
    990394 9hs3:A (3.4) BS02 0O2 N/A GO:0005829 ... P0ADR8 41197623
    990395 9hs3:A (3.4) BS03 0O2 N/A GO:0005829 ... P0ADR8 41197623
    990396 9hs3:B (3.4) BS01 0O2 N/A GO:0005829 ... P0ADR8 41197623
    990397 9hs3:B (3.4) BS02 HSX N/A GO:0005829 ... P0ADR8 41197623
    990398 9hs3:B (3.4) BS03 0O2 N/A GO:0005829 ... P0ADR8 41197623
    990399 9hs3:C (3.4) BS01 HSX N/A GO:0005829 ... P0ADR8 41197623
    990400 9hs3:C (3.4) BS02 0O2 N/A GO:0005829 ... P0ADR8 41197623

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).