SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    990801 9hwf:A (1.4) BS02 IP1 N/A GO:0005829 ... P05326 N/A
    990802 9hwg:A (3.5) BS01 rna N/A GO:0001172 ... A0A8D1DPV6 40624163
    990803 9hwg:A (3.5) BS02 dna N/A GO:0001172 ... A0A8D1DPV6 40624163
    990804 9hwg:A (3.5) BS03 ZN N/A GO:0001172 ... A0A8D1DPV6 40624163
    990805 9hwg:A (3.5) BS04 ZN N/A GO:0001172 ... A0A8D1DPV6 40624163
    990806 9hwg:A (3.5) BS05 MG N/A GO:0001172 ... A0A8D1DPV6 40624163
    990807 9hwg:B (3.5) BS01 dna N/A GO:0001172 ... A0A0B8RVL1 40624163
    990808 9hwg:B (3.5) BS02 rna N/A GO:0001172 ... A0A0B8RVL1 40624163
    990809 9hwg:B (3.5) BS03 dna N/A GO:0001172 ... A0A0B8RVL1 40624163
    990810 9hwg:B (3.5) BS04 ZN N/A GO:0001172 ... A0A0B8RVL1 40624163
    990811 9hwg:C (3.5) BS01 ZN N/A GO:0003677 ... I3LCH3 40624163
    990812 9hwg:E (3.5) BS01 dna N/A GO:0003677 ... I3LSI7 40624163
    990813 9hwg:I (3.5) BS01 ZN N/A GO:0001193 ... P60899 40624163
    990814 9hwg:I (3.5) BS02 ZN N/A GO:0001193 ... P60899 40624163
    990815 9hwg:J (3.5) BS01 ZN N/A GO:0003677 ... A0A4X1VYD0 40624163
    990816 9hwg:L (3.5) BS01 ZN N/A GO:0001650 ... A0A4X1TRS6 40624163
    990817 9hwg:b (3.5) BS01 dna N/A GO:0000012 ... Q03468 40624163
    990818 9hwg:b (3.5) BS02 dna N/A GO:0000012 ... Q03468 40624163
    990819 9hwg:e (3.5) BS01 ZN N/A N/A A0A024R7E8 40624163
    990820 9hwk:F (2.72) BS01 HEO N/A GO:0004129 ... P0ABI8 41592050
    990821 9hwk:F (2.72) BS02 HEM N/A GO:0004129 ... P0ABI8 41592050
    990822 9hwk:F (2.72) BS03 CU N/A GO:0004129 ... P0ABI8 41592050
    990823 9hwm:A (1.15) BS01 ZN N/A GO:0004064 ... P00918 N/A
    990824 9hwm:A (1.15) BS02 A1IX5 N/A GO:0004064 ... P00918 N/A
    990825 9hwn:A (1.6) BS01 A1IX5 N/A GO:0004064 ... P00915 N/A
    990826 9hwn:A (1.6) BS02 ZN N/A GO:0004064 ... P00915 N/A
    990827 9hwn:B (1.6) BS01 A1IX5 N/A GO:0004064 ... P00915 N/A
    990828 9hwn:B (1.6) BS02 ZN N/A GO:0004064 ... P00915 N/A
    990829 9hwq:A (1.14) BS01 B0A N/A N/A Q9Z2X8 40838516
    990830 9hwr:A (1.4) BS01 A1IX2 N/A N/A Q9Z2X8 40838516
    990831 9hws:A (1.61) BS01 A1IX3 N/A N/A Q9Z2X8 40838516
    990832 9hwt:A (1.65) BS01 A1IX4 N/A N/A Q9Z2X8 40838516
    990833 9hwu:A (1.4) BS01 A1IXY N/A N/A Q9Z2X8 40838516
    990834 9hwv:A (1.5) BS01 A1IXZ N/A N/A Q9Z2X8 40838516
    990835 9hww:A (1.61) BS01 A1IX0 N/A N/A Q9Z2X8 40838516
    990836 9hwx:A (1.74) BS01 A1IX1 N/A N/A Q9Z2X8 40838516
    990837 9hx2:A (2.85) BS01 A1IYE N/A GO:0003677 ... P37231 40318479
    990838 9hx7:A (2.3) BS01 rna N/A N/A Q12306
    Q13247
    N/A
    990839 9hxc:A (3.3) BS01 GDP N/A GO:0003924 ... N/A 40120574
    990840 9hxc:B (3.3) BS01 GDP N/A GO:0003924 ... N/A 40120574
    990841 9hxc:E (3.3) BS01 GDP N/A GO:0003924 ... N/A 40120574
    990842 9hxc:G (3.3) BS01 GDP N/A GO:0003924 ... N/A 40120574
    990843 9hxc:I (3.3) BS01 GDP N/A GO:0003924 ... N/A 40120574
    990844 9hxc:K (3.3) BS01 GDP N/A GO:0003924 ... N/A 40120574
    990845 9hxc:M (3.3) BS01 GDP N/A GO:0003924 ... N/A 40120574
    990846 9hxc:O (3.3) BS01 GDP N/A GO:0003924 ... N/A 40120574
    990847 9hxc:Q (3.3) BS01 GDP N/A GO:0003924 ... N/A 40120574
    990848 9hxc:S (3.3) BS01 GDP N/A GO:0003924 ... N/A 40120574
    990849 9hxc:U (3.3) BS01 GDP N/A GO:0003924 ... N/A 40120574
    990850 9hxc:W (3.3) BS01 GDP N/A GO:0003924 ... N/A 40120574
    990851 9hxc:Y (3.3) BS01 GDP N/A GO:0003924 ... N/A 40120574
    990852 9hxc:a (3.3) BS01 GDP N/A GO:0003924 ... N/A 40120574
    990853 9hxq:A (2.8) BS01 AES N/A GO:0004252 ... P19205 41074793
    990854 9hxq:B (2.8) BS01 AES N/A GO:0004252 ... P19205 41074793
    990855 9hxq:C (2.8) BS01 AES N/A GO:0004252 ... P19205 41074793
    990856 9hxq:D (2.8) BS01 AES N/A GO:0004252 ... P19205 41074793
    990857 9hxu:A (2.2) BS01 SYA N/A N/A P68400 N/A
    990858 9hxu:A (2.2) BS02 SYA N/A N/A P68400 N/A
    990859 9hxu:B (2.2) BS01 SYA N/A N/A P68400 N/A
    990860 9hxv:A (1.9) BS01 dna N/A GO:0016706 ... Q6N021 40365382
    990861 9hxv:A (1.9) BS02 dna N/A GO:0016706 ... Q6N021 40365382
    990862 9hxv:A (1.9) BS03 FE2 N/A GO:0016706 ... Q6N021 40365382
    990863 9hxv:A (1.9) BS04 ZN N/A GO:0016706 ... Q6N021 40365382
    990864 9hxv:A (1.9) BS05 ZN N/A GO:0016706 ... Q6N021 40365382
    990865 9hxv:A (1.9) BS06 ZN N/A GO:0016706 ... Q6N021 40365382
    990866 9hxv:A (1.9) BS07 8XQ N/A GO:0016706 ... Q6N021 40365382
    990867 9hxw:A (3.1) BS01 ZN N/A GO:0005515 ... Q5T4S7 N/A
    990868 9hxw:A (3.1) BS02 ZN N/A GO:0005515 ... Q5T4S7 N/A
    990869 9hxw:A (3.1) BS03 ZN N/A GO:0005515 ... Q5T4S7 N/A
    990870 9hxw:A (3.1) BS04 ZN N/A GO:0005515 ... Q5T4S7 N/A
    990871 9hxw:A (3.1) BS05 ZN N/A GO:0005515 ... Q5T4S7 N/A
    990872 9hxw:A (3.1) BS06 ZN N/A GO:0005515 ... Q5T4S7 N/A
    990873 9hxw:B (3.1) BS01 ZN N/A GO:0005515 ... Q5T4S7 N/A
    990874 9hxw:B (3.1) BS02 ZN N/A GO:0005515 ... Q5T4S7 N/A
    990875 9hxw:B (3.1) BS03 ZN N/A GO:0005515 ... Q5T4S7 N/A
    990876 9hxw:B (3.1) BS04 ZN N/A GO:0005515 ... Q5T4S7 N/A
    990877 9hxw:B (3.1) BS05 ZN N/A GO:0005515 ... Q5T4S7 N/A
    990878 9hxw:B (3.1) BS06 ZN N/A GO:0005515 ... Q5T4S7 N/A
    990879 9hxw:C (3.1) BS01 ZN N/A N/A Q9P0J7 N/A
    990880 9hxw:C (3.1) BS02 ZN N/A N/A Q9P0J7 N/A
    990881 9hxw:C (3.1) BS03 ZN N/A N/A Q9P0J7 N/A
    990882 9hxw:C (3.1) BS04 ZN N/A N/A Q9P0J7 N/A
    990883 9hxw:D (3.1) BS01 ZN N/A N/A Q9P0J7 N/A
    990884 9hxw:D (3.1) BS02 ZN N/A N/A Q9P0J7 N/A
    990885 9hxw:D (3.1) BS03 ZN N/A N/A Q9P0J7 N/A
    990886 9hxw:D (3.1) BS04 ZN N/A N/A Q9P0J7 N/A
    990887 9hxx:A (1.52) BS01 HEM N/A GO:0004601 ... A0A7U9HFU5 40843530
    990888 9hxx:A (1.52) BS02 NO N/A GO:0004601 ... A0A7U9HFU5 40843530
    990889 9hxx:B (1.52) BS01 HEM N/A GO:0004601 ... A0A7U9HFU5 40843530
    990890 9hxx:B (1.52) BS02 NO N/A GO:0004601 ... A0A7U9HFU5 40843530
    990891 9hxx:C (1.52) BS01 HEM N/A GO:0004601 ... A0A7U9HFU5 40843530
    990892 9hxx:C (1.52) BS02 NO N/A GO:0004601 ... A0A7U9HFU5 40843530
    990893 9hxx:D (1.52) BS01 HEM N/A GO:0004601 ... A0A7U9HFU5 40843530
    990894 9hxx:D (1.52) BS02 NO N/A GO:0004601 ... A0A7U9HFU5 40843530
    990895 9hxx:E (1.52) BS01 HEM N/A GO:0004601 ... A0A7U9HFU5 40843530
    990896 9hxx:E (1.52) BS02 NO N/A GO:0004601 ... A0A7U9HFU5 40843530
    990897 9hxx:F (1.52) BS01 HEM N/A GO:0004601 ... A0A7U9HFU5 40843530
    990898 9hxx:F (1.52) BS02 NO N/A GO:0004601 ... A0A7U9HFU5 40843530
    990899 9hxz:AAA (1.32) BS01 ZN N/A GO:0004064 ... P00918 N/A
    990900 9hxz:AAA (1.32) BS02 A1IS9 N/A GO:0004064 ... P00918 N/A
    990901 9hy0:A (0.95) BS01 U5P N/A N/A P11172 N/A
    990902 9hy0:A (0.95) BS02 PRO N/A N/A P11172 N/A
    990903 9hy4:A (2.0) BS01 peptide N/A N/A P01899 41481462
    990904 9hy4:C (2.0) BS01 peptide N/A N/A P01899 41481462
    990905 9hy6:0 (2.6) BS01 rna N/A GO:0000027 ... P0A7M2 N/A
    990906 9hy6:1 (2.6) BS01 rna N/A GO:0000027 ... P0A7M6 N/A
    990907 9hy6:2 (2.6) BS01 rna N/A GO:0000027 ... P0AG51 N/A
    990908 9hy6:3 (2.6) BS01 rna N/A GO:0000027 ... P0A7N4 N/A
    990909 9hy6:4 (2.6) BS01 rna N/A GO:0000027 ... P0A7N9 N/A
    990910 9hy6:6 (2.6) BS01 rna N/A GO:0002181 ... P0A7P5 N/A
    990911 9hy6:7 (2.6) BS01 rna N/A GO:0002181 ... P0A7Q1 N/A
    990912 9hy6:8 (2.6) BS01 rna N/A GO:0005737 ... A0A2X1PTA3 N/A
    990913 9hy6:c (2.6) BS01 rna N/A GO:0000027 ... P60422 N/A
    990914 9hy6:d (2.6) BS01 rna N/A GO:0000027 ... P60438 N/A
    990915 9hy6:e (2.6) BS01 rna N/A GO:0001070 ... P60723 N/A
    990916 9hy6:f (2.6) BS01 rna N/A GO:0000027 ... P62399 N/A
    990917 9hy6:f (2.6) BS02 rna N/A GO:0000027 ... P62399 N/A
    990918 9hy6:g (2.6) BS01 rna N/A GO:0000027 ... P0AG55 N/A
    990919 9hy6:h (2.6) BS01 rna N/A GO:0002181 ... P0A7R1 N/A
    990920 9hy6:j (2.6) BS01 rna N/A GO:0002181 ... P0AA10 N/A
    990921 9hy6:k (2.6) BS01 rna N/A GO:0002181 ... P0ADY3 N/A
    990922 9hy6:l (2.6) BS01 rna N/A GO:0002181 ... P02413 N/A
    990923 9hy6:m (2.6) BS01 rna N/A GO:0000027 ... P0ADY7 N/A
    990924 9hy6:m (2.6) BS02 rna N/A GO:0000027 ... P0ADY7 N/A
    990925 9hy6:m (2.6) BS03 rna N/A GO:0000027 ... P0ADY7 N/A
    990926 9hy6:n (2.6) BS01 rna N/A GO:0000027 ... P0AG44 N/A
    990927 9hy6:o (2.6) BS01 rna N/A GO:0002181 ... P0C018 N/A
    990928 9hy6:o (2.6) BS02 rna N/A GO:0002181 ... P0C018 N/A
    990929 9hy6:p (2.6) BS01 rna N/A GO:0000027 ... P0A7K6 N/A
    990930 9hy6:q (2.6) BS01 rna N/A GO:0000027 ... P0A7L3 N/A
    990931 9hy6:r (2.6) BS01 rna N/A GO:0002181 ... P0AG48 N/A
    990932 9hy6:s (2.6) BS01 peptide N/A GO:0002181 ... P61175 N/A
    990933 9hy6:s (2.6) BS02 rna N/A GO:0002181 ... P61175 N/A
    990934 9hy6:t (2.6) BS01 rna N/A GO:0000027 ... P0ADZ0 N/A
    990935 9hy6:u (2.6) BS01 rna N/A GO:0000027 ... P60624 N/A
    990936 9hy6:w (2.6) BS01 rna N/A GO:0000027 ... P68919 N/A
    990937 9hy6:w (2.6) BS02 rna N/A GO:0000027 ... P68919 N/A
    990938 9hy6:y (2.6) BS01 rna N/A GO:0000027 ... P0A7L8 N/A
    990939 9hy6:y (2.6) BS02 rna N/A GO:0000027 ... P0A7L8 N/A
    990940 9hy6:y (2.6) BS03 rna N/A GO:0000027 ... P0A7L8 N/A
    990941 9hy7:A (2.3) BS01 FUC N/A GO:0004560 ... A0A0R1ZV46 40286956
    990942 9hy7:B (2.3) BS01 FUC N/A GO:0004560 ... A0A0R1ZV46 40286956
    990943 9hy7:C (2.3) BS01 FUC N/A GO:0004560 ... A0A0R1ZV46 40286956
    990944 9hy7:D (2.3) BS01 FUC N/A GO:0004560 ... A0A0R1ZV46 40286956
    990945 9hy7:E (2.3) BS01 FUC N/A GO:0004560 ... A0A0R1ZV46 40286956
    990946 9hy7:F (2.3) BS01 FUC N/A GO:0004560 ... A0A0R1ZV46 40286956
    990947 9hy8:A (2.98) BS01 A1IX7 N/A N/A Q13546 40969564
    990948 9hy8:B (2.98) BS01 1HX N/A N/A Q13546 40969564
    990949 9hy9:A (2.29) BS01 A1IX9 N/A N/A Q13546 40969564
    990950 9hy9:B (2.29) BS01 A1IX9 N/A N/A Q13546 40969564
    990951 9hyb:C (2.84) BS01 A1IYB N/A N/A P40337 41022846
    990952 9hyb:F (2.84) BS01 A1IYB N/A N/A P40337 41022846
    990953 9hyb:I (2.84) BS01 A1IYB N/A N/A P40337 41022846
    990954 9hyb:L (2.84) BS01 A1IYB N/A N/A P40337 41022846
    990955 9hyb:M (2.84) BS01 A1IYB N/A GO:0006338 ... P51531 41022846
    990956 9hyb:N (2.84) BS01 A1IYB N/A GO:0006338 ... P51531 41022846
    990957 9hyb:O (2.84) BS01 A1IYB N/A GO:0006338 ... P51531 41022846
    990958 9hyb:P (2.84) BS01 A1IYB N/A GO:0006338 ... P51531 41022846
    990959 9hyc:A (1.71) BS01 FE N/A N/A Q8N4E7 N/A
    990960 9hyc:A (1.71) BS02 FE N/A N/A Q8N4E7 N/A
    990961 9hyc:A (1.71) BS03 FE N/A N/A Q8N4E7 N/A
    990962 9hyc:A (1.71) BS04 FE N/A N/A Q8N4E7 N/A
    990963 9hyc:A (1.71) BS05 MG N/A N/A Q8N4E7 N/A
    990964 9hyc:A (1.71) BS06 MG N/A N/A Q8N4E7 N/A
    990965 9hyh:A (1.96) BS01 SY4 N/A N/A P68400 N/A
    990966 9hyh:A (1.96) BS02 3NG N/A N/A P68400 N/A
    990967 9hyh:B (1.96) BS01 3NG N/A N/A P68400 N/A
    990968 9hyh:B (1.96) BS02 SY4 N/A N/A P68400 N/A
    990969 9hyi:A (2.3) BS01 T7M N/A GO:0000132 ... P63096 N/A
    990970 9hyi:R (2.3) BS01 CLR N/A GO:0001586 ... P08908 N/A
    990971 9hyi:R (2.3) BS02 CLR N/A GO:0001586 ... P08908 N/A
    990972 9hyi:R (2.3) BS03 T7M N/A GO:0001586 ... P08908 N/A
    990973 9hyi:R (2.3) BS04 A1IYG N/A GO:0001586 ... P08908 N/A
    990974 9hym:0 (2.2) BS01 rna N/A GO:0000027 ... P0A7M2 N/A
    990975 9hym:1 (2.2) BS01 rna N/A GO:0000027 ... P0A7M6 N/A
    990976 9hym:2 (2.2) BS01 rna N/A GO:0000027 ... P0AG51 N/A
    990977 9hym:3 (2.2) BS01 rna N/A GO:0000027 ... P0A7N4 N/A
    990978 9hym:4 (2.2) BS01 rna N/A GO:0000027 ... P0A7N9 N/A
    990979 9hym:6 (2.2) BS01 rna N/A GO:0002181 ... P0A7P5 N/A
    990980 9hym:7 (2.2) BS01 rna N/A GO:0002181 ... P0A7Q1 N/A
    990981 9hym:8 (2.2) BS01 rna N/A GO:0005737 ... A0A2X1PTA3 N/A
    990982 9hym:c (2.2) BS01 rna N/A GO:0000027 ... P60422 N/A
    990983 9hym:d (2.2) BS01 rna N/A GO:0000027 ... P60438 N/A
    990984 9hym:e (2.2) BS01 rna N/A GO:0001070 ... P60723 N/A
    990985 9hym:f (2.2) BS01 rna N/A GO:0000027 ... P62399 N/A
    990986 9hym:f (2.2) BS02 rna N/A GO:0000027 ... P62399 N/A
    990987 9hym:f (2.2) BS03 rna N/A GO:0000027 ... P62399 N/A
    990988 9hym:g (2.2) BS01 rna N/A GO:0000027 ... P0AG55 N/A
    990989 9hym:h (2.2) BS01 rna N/A GO:0002181 ... P0A7R1 N/A
    990990 9hym:j (2.2) BS01 rna N/A GO:0002181 ... P0AA10 N/A
    990991 9hym:k (2.2) BS01 rna N/A GO:0002181 ... P0ADY3 N/A
    990992 9hym:l (2.2) BS01 rna N/A GO:0002181 ... P02413 N/A
    990993 9hym:m (2.2) BS01 rna N/A GO:0000027 ... P0ADY7 N/A
    990994 9hym:m (2.2) BS02 rna N/A GO:0000027 ... P0ADY7 N/A
    990995 9hym:n (2.2) BS01 rna N/A GO:0000027 ... P0AG44 N/A
    990996 9hym:o (2.2) BS01 rna N/A GO:0002181 ... P0C018 N/A
    990997 9hym:o (2.2) BS02 rna N/A GO:0002181 ... P0C018 N/A
    990998 9hym:p (2.2) BS01 rna N/A GO:0000027 ... P0A7K6 N/A
    990999 9hym:q (2.2) BS01 rna N/A GO:0000027 ... P0A7L3 N/A
    991000 9hym:r (2.2) BS01 rna N/A GO:0002181 ... P0AG48 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).