SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    991201 9hz1:E (2.4) BS01 JFZ N/A GO:0004560 ... A0A0R1ZV46 40286956
    991202 9hz1:F (2.4) BS01 JFZ N/A GO:0004560 ... A0A0R1ZV46 40286956
    991203 9hz5:B (2.6) BS01 peptide N/A GO:0015031 ... F7G1S7 40669140
    991204 9hz5:B (2.6) BS02 A1A2B N/A GO:0015031 ... F7G1S7 40669140
    991205 9hz8:2 (3.4) BS01 peptide N/A N/A J7FAS3 41353512
    991206 9hz8:5 (3.4) BS01 peptide N/A N/A J7FAS3 41353512
    991207 9hz8:6 (3.4) BS01 peptide N/A N/A J7FAS3 41353512
    991208 9hz8:7 (3.4) BS01 peptide N/A N/A J7FAS3 41353512
    991209 9hz8:8 (3.4) BS01 peptide N/A N/A J7FAS3 41353512
    991210 9hz8:A (3.4) BS01 peptide N/A N/A J7F9G3 41353512
    991211 9hz8:A (3.4) BS02 peptide N/A N/A J7F9G3 41353512
    991212 9hz8:A (3.4) BS03 peptide N/A N/A J7F9G3 41353512
    991213 9hz8:B (3.4) BS01 peptide N/A N/A J7F9G3 41353512
    991214 9hz8:B (3.4) BS02 peptide N/A N/A J7F9G3 41353512
    991215 9hz8:C (3.4) BS01 peptide N/A N/A J7F9G3 41353512
    991216 9hz8:C (3.4) BS02 peptide N/A N/A J7F9G3 41353512
    991217 9hz8:D (3.4) BS01 peptide N/A N/A J7F9G3 41353512
    991218 9hz8:D (3.4) BS02 peptide N/A N/A J7F9G3 41353512
    991219 9hz8:E (3.4) BS01 peptide N/A N/A J7F9G3 41353512
    991220 9hz8:E (3.4) BS02 peptide N/A N/A J7F9G3 41353512
    991221 9hz8:F (3.4) BS01 peptide N/A N/A J7F9G3 41353512
    991222 9hz8:F (3.4) BS02 peptide N/A N/A J7F9G3 41353512
    991223 9hz8:G (3.4) BS01 peptide N/A N/A J7FAS3 41353512
    991224 9hz8:H (3.4) BS01 peptide N/A N/A J7FAS3 41353512
    991225 9hz8:I (3.4) BS01 peptide N/A N/A J7FAS3 41353512
    991226 9hz8:J (3.4) BS01 peptide N/A N/A J7FAS3 41353512
    991227 9hz8:K (3.4) BS01 peptide N/A N/A J7FAS3 41353512
    991228 9hz8:L (3.4) BS01 peptide N/A N/A J7FAS3 41353512
    991229 9hz8:S (3.4) BS01 peptide N/A N/A J7F9G3 41353512
    991230 9hz8:S (3.4) BS02 peptide N/A N/A J7F9G3 41353512
    991231 9hz8:T (3.4) BS01 peptide N/A N/A J7F9G3 41353512
    991232 9hz8:T (3.4) BS02 peptide N/A N/A J7F9G3 41353512
    991233 9hz8:U (3.4) BS01 peptide N/A N/A J7F9G3 41353512
    991234 9hz8:U (3.4) BS02 peptide N/A N/A J7F9G3 41353512
    991235 9hz8:U (3.4) BS03 peptide N/A N/A J7F9G3 41353512
    991236 9hz8:V (3.4) BS01 peptide N/A N/A J7F9G3 41353512
    991237 9hz8:V (3.4) BS02 peptide N/A N/A J7F9G3 41353512
    991238 9hz8:W (3.4) BS01 peptide N/A N/A J7F9G3 41353512
    991239 9hz8:W (3.4) BS02 peptide N/A N/A J7F9G3 41353512
    991240 9hz8:X (3.4) BS01 peptide N/A N/A J7F9G3 41353512
    991241 9hz8:X (3.4) BS02 peptide N/A N/A J7F9G3 41353512
    991242 9hz8:Y (3.4) BS01 peptide N/A N/A J7FAS3 41353512
    991243 9hz8:Z (3.4) BS01 peptide N/A N/A J7FAS3 41353512
    991244 9hz8:a (3.4) BS01 peptide N/A N/A J7FAS3 41353512
    991245 9hz8:b (3.4) BS01 peptide N/A N/A J7FAS3 41353512
    991246 9hz8:c (3.4) BS01 peptide N/A N/A J7FAS3 41353512
    991247 9hz8:d (3.4) BS01 peptide N/A N/A J7FAS3 41353512
    991248 9hz8:k (3.4) BS01 peptide N/A N/A J7F9G3 41353512
    991249 9hz8:k (3.4) BS02 peptide N/A N/A J7F9G3 41353512
    991250 9hz8:l (3.4) BS01 peptide N/A N/A J7F9G3 41353512
    991251 9hz8:l (3.4) BS02 peptide N/A N/A J7F9G3 41353512
    991252 9hz8:m (3.4) BS01 peptide N/A N/A J7F9G3 41353512
    991253 9hz8:m (3.4) BS02 peptide N/A N/A J7F9G3 41353512
    991254 9hz8:o (3.4) BS01 peptide N/A N/A J7F9G3 41353512
    991255 9hz8:o (3.4) BS02 peptide N/A N/A J7F9G3 41353512
    991256 9hz8:p (3.4) BS01 peptide N/A N/A J7FAS3 41353512
    991257 9hz8:p (3.4) BS02 peptide N/A N/A J7FAS3 41353512
    991258 9hz8:q (3.4) BS01 peptide N/A N/A J7FAS3 41353512
    991259 9hz8:r (3.4) BS01 peptide N/A N/A J7FAS3 41353512
    991260 9hz8:s (3.4) BS01 peptide N/A N/A J7FAS3 41353512
    991261 9hz8:t (3.4) BS01 peptide N/A N/A J7FAS3 41353512
    991262 9hz8:u (3.4) BS01 peptide N/A N/A J7F9G3 41353512
    991263 9hz8:u (3.4) BS02 peptide N/A N/A J7F9G3 41353512
    991264 9hzh:A (2.07) BS01 3NG N/A N/A P68400 N/A
    991265 9hzh:A (2.07) BS02 T9Y N/A N/A P68400 N/A
    991266 9hzh:B (2.07) BS01 3NG N/A N/A P68400 N/A
    991267 9hzh:B (2.07) BS02 T9Y N/A N/A P68400 N/A
    991268 9hzi:A (2.27) BS01 A1IZH N/A GO:0042184 ... Q01468 N/A
    991269 9hzi:A (2.27) BS02 A1IZH N/A GO:0042184 ... Q01468 N/A
    991270 9hzi:B (2.27) BS01 A1IZH N/A GO:0042184 ... Q01468 N/A
    991271 9hzi:C (2.27) BS01 A1IZH N/A GO:0042184 ... Q01468 N/A
    991272 9hzl:C (2.52) BS01 FES N/A GO:0005515 ... P47985 41519940
    991273 9hzl:C (2.52) BS02 PLX N/A GO:0005515 ... P47985 41519940
    991274 9hzl:D (2.52) BS01 PLX N/A GO:0005515 ... Q9UDW1 41519940
    991275 9hzl:H (2.52) BS01 HEC N/A GO:0005515 ... P08574 41519940
    991276 9hzl:J (2.52) BS01 HEM N/A GO:0005739 ... P00156 41519940
    991277 9hzl:J (2.52) BS02 HEM N/A GO:0005739 ... P00156 41519940
    991278 9hzl:J (2.52) BS03 U10 N/A GO:0005739 ... P00156 41519940
    991279 9hzl:J (2.52) BS04 U10 N/A GO:0005739 ... P00156 41519940
    991280 9hzl:J (2.52) BS05 U10 N/A GO:0005739 ... P00156 41519940
    991281 9hzl:P (2.52) BS01 FES N/A GO:0005515 ... P47985 41519940
    991282 9hzl:T (2.52) BS01 PLX N/A GO:0005739 ... O14957 41519940
    991283 9hzl:U (2.52) BS01 HEC N/A GO:0005515 ... P08574 41519940
    991284 9hzl:V (2.52) BS01 U10 N/A GO:0005739 ... P00156 41519940
    991285 9hzl:V (2.52) BS02 HEM N/A GO:0005739 ... P00156 41519940
    991286 9hzl:V (2.52) BS03 HEM N/A GO:0005739 ... P00156 41519940
    991287 9hzl:V (2.52) BS04 U10 N/A GO:0005739 ... P00156 41519940
    991288 9hzl:V (2.52) BS05 U10 N/A GO:0005739 ... P00156 41519940
    991289 9i02:A (2.58) BS01 FUC N/A GO:0001540 ... P06276 40454648
    991290 9i02:A (2.58) BS02 A1IYP N/A GO:0001540 ... P06276 40454648
    991291 9i02:A (2.58) BS03 SIA N/A GO:0001540 ... P06276 40454648
    991292 9i03:A (2.56) BS01 FUC N/A GO:0001540 ... P06276 40454648
    991293 9i03:A (2.56) BS02 SIA N/A GO:0001540 ... P06276 40454648
    991294 9i03:A (2.56) BS03 A1IYQ N/A GO:0001540 ... P06276 40454648
    991295 9i04:A (4.05) BS01 dna N/A N/A P12956 40328761
    991296 9i04:A (4.05) BS02 dna N/A N/A P12956 40328761
    991297 9i04:B (4.05) BS01 dna N/A N/A P13010 40328761
    991298 9i04:B (4.05) BS02 dna N/A N/A P13010 40328761
    991299 9i05:AA (2.2) BS01 rna N/A GO:0003735 ... A0A125YTD0 39827269
    991300 9i05:AA (2.2) BS02 rna N/A GO:0003735 ... A0A125YTD0 39827269
    991301 9i05:AA (2.2) BS03 rna N/A GO:0003735 ... A0A125YTD0 39827269
    991302 9i05:AA (2.2) BS04 rna N/A GO:0003735 ... A0A125YTD0 39827269
    991303 9i05:AA (2.2) BS05 rna N/A GO:0003735 ... A0A125YTD0 39827269
    991304 9i05:AB (2.2) BS01 rna N/A GO:0003735 ... A0A125YVS1 39827269
    991305 9i05:AB (2.2) BS02 rna N/A GO:0003735 ... A0A125YVS1 39827269
    991306 9i05:AB (2.2) BS03 rna N/A GO:0003735 ... A0A125YVS1 39827269
    991307 9i05:AD (2.2) BS01 rna N/A GO:0003735 ... A0A125YX92 39827269
    991308 9i05:AD (2.2) BS02 rna N/A GO:0003735 ... A0A125YX92 39827269
    991309 9i05:AE (2.2) BS01 rna N/A N/A S8G1Y9 39827269
    991310 9i05:AF (2.2) BS01 peptide N/A GO:0003735 ... S8F6A8 39827269
    991311 9i05:AF (2.2) BS02 rna N/A GO:0003735 ... S8F6A8 39827269
    991312 9i05:AF (2.2) BS03 rna N/A GO:0003735 ... S8F6A8 39827269
    991313 9i05:AG (2.2) BS01 peptide N/A N/A S8GF62 39827269
    991314 9i05:AG (2.2) BS02 rna N/A N/A S8GF62 39827269
    991315 9i05:AG (2.2) BS03 rna N/A N/A S8GF62 39827269
    991316 9i05:AG (2.2) BS04 rna N/A N/A S8GF62 39827269
    991317 9i05:AG (2.2) BS05 rna N/A N/A S8GF62 39827269
    991318 9i05:AH (2.2) BS01 rna N/A N/A A0A0F7V869 39827269
    991319 9i05:AH (2.2) BS02 rna N/A N/A A0A0F7V869 39827269
    991320 9i05:AH (2.2) BS03 rna N/A N/A A0A0F7V869 39827269
    991321 9i05:AI (2.2) BS01 rna N/A N/A S8GIP4 39827269
    991322 9i05:AI (2.2) BS02 rna N/A N/A S8GIP4 39827269
    991323 9i05:AI (2.2) BS03 rna N/A N/A S8GIP4 39827269
    991324 9i05:AI (2.2) BS04 rna N/A N/A S8GIP4 39827269
    991325 9i05:AI (2.2) BS05 rna N/A N/A S8GIP4 39827269
    991326 9i05:Aa (2.2) BS01 rna N/A GO:0003723 ... S8F793 39827269
    991327 9i05:Aa (2.2) BS02 rna N/A GO:0003723 ... S8F793 39827269
    991328 9i05:Aa (2.2) BS03 rna N/A GO:0003723 ... S8F793 39827269
    991329 9i05:Aa (2.2) BS04 rna N/A GO:0003723 ... S8F793 39827269
    991330 9i05:Ab (2.2) BS01 peptide N/A GO:0003735 ... A0A125YKW9 39827269
    991331 9i05:Ab (2.2) BS02 rna N/A GO:0003735 ... A0A125YKW9 39827269
    991332 9i05:Ab (2.2) BS03 rna N/A GO:0003735 ... A0A125YKW9 39827269
    991333 9i05:Ab (2.2) BS04 rna N/A GO:0003735 ... A0A125YKW9 39827269
    991334 9i05:Ab (2.2) BS05 rna N/A GO:0003735 ... A0A125YKW9 39827269
    991335 9i05:Ab (2.2) BS06 rna N/A GO:0003735 ... A0A125YKW9 39827269
    991336 9i05:Ab (2.2) BS07 rna N/A GO:0003735 ... A0A125YKW9 39827269
    991337 9i05:Ab (2.2) BS08 rna N/A GO:0003735 ... A0A125YKW9 39827269
    991338 9i05:Ac (2.2) BS01 peptide N/A GO:0003735 ... S8EX11 39827269
    991339 9i05:Ac (2.2) BS02 peptide N/A GO:0003735 ... S8EX11 39827269
    991340 9i05:Ac (2.2) BS03 rna N/A GO:0003735 ... S8EX11 39827269
    991341 9i05:Ac (2.2) BS04 rna N/A GO:0003735 ... S8EX11 39827269
    991342 9i05:Ac (2.2) BS05 rna N/A GO:0003735 ... S8EX11 39827269
    991343 9i05:Ac (2.2) BS06 rna N/A GO:0003735 ... S8EX11 39827269
    991344 9i05:Ac (2.2) BS07 rna N/A GO:0003735 ... S8EX11 39827269
    991345 9i05:Ac (2.2) BS08 rna N/A GO:0003735 ... S8EX11 39827269
    991346 9i05:Ac (2.2) BS09 rna N/A GO:0003735 ... S8EX11 39827269
    991347 9i05:Ac (2.2) BS10 rna N/A GO:0003735 ... S8EX11 39827269
    991348 9i05:Ac (2.2) BS11 rna N/A GO:0003735 ... S8EX11 39827269
    991349 9i05:Ad (2.2) BS01 rna N/A N/A S8GMU2 39827269
    991350 9i05:Ad (2.2) BS02 rna N/A N/A S8GMU2 39827269
    991351 9i05:Ad (2.2) BS03 rna N/A N/A S8GMU2 39827269
    991352 9i05:Ad (2.2) BS04 rna N/A N/A S8GMU2 39827269
    991353 9i05:Ae (2.2) BS01 peptide N/A GO:0003735 ... S8G4D4 39827269
    991354 9i05:Ae (2.2) BS02 rna N/A GO:0003735 ... S8G4D4 39827269
    991355 9i05:Af (2.2) BS01 rna N/A GO:0003735 ... A0A125YTN1 39827269
    991356 9i05:Af (2.2) BS02 rna N/A GO:0003735 ... A0A125YTN1 39827269
    991357 9i05:Ag (2.2) BS01 peptide N/A GO:0003729 ... A0A125YJY5 39827269
    991358 9i05:Ag (2.2) BS02 rna N/A GO:0003729 ... A0A125YJY5 39827269
    991359 9i05:Ag (2.2) BS03 rna N/A GO:0003729 ... A0A125YJY5 39827269
    991360 9i05:Ag (2.2) BS04 rna N/A GO:0003729 ... A0A125YJY5 39827269
    991361 9i05:Ag (2.2) BS05 rna N/A GO:0003729 ... A0A125YJY5 39827269
    991362 9i05:Ag (2.2) BS06 rna N/A GO:0003729 ... A0A125YJY5 39827269
    991363 9i05:Ag (2.2) BS07 rna N/A GO:0003729 ... A0A125YJY5 39827269
    991364 9i05:Ag (2.2) BS08 rna N/A GO:0003729 ... A0A125YJY5 39827269
    991365 9i05:Ag (2.2) BS09 rna N/A GO:0003729 ... A0A125YJY5 39827269
    991366 9i05:Ag (2.2) BS10 rna N/A GO:0003729 ... A0A125YJY5 39827269
    991367 9i05:Ah (2.2) BS01 peptide N/A GO:0003735 ... A0A125YQP1 39827269
    991368 9i05:Ah (2.2) BS02 rna N/A GO:0003735 ... A0A125YQP1 39827269
    991369 9i05:Ah (2.2) BS03 rna N/A GO:0003735 ... A0A125YQP1 39827269
    991370 9i05:Ah (2.2) BS04 rna N/A GO:0003735 ... A0A125YQP1 39827269
    991371 9i05:Ah (2.2) BS05 rna N/A GO:0003735 ... A0A125YQP1 39827269
    991372 9i05:Ai (2.2) BS01 rna N/A GO:0003735 ... S8GIU7 39827269
    991373 9i05:Ai (2.2) BS02 rna N/A GO:0003735 ... S8GIU7 39827269
    991374 9i05:Ai (2.2) BS03 rna N/A GO:0003735 ... S8GIU7 39827269
    991375 9i05:Ai (2.2) BS04 rna N/A GO:0003735 ... S8GIU7 39827269
    991376 9i05:Ai (2.2) BS05 rna N/A GO:0003735 ... S8GIU7 39827269
    991377 9i05:Ai (2.2) BS06 rna N/A GO:0003735 ... S8GIU7 39827269
    991378 9i05:Ai (2.2) BS07 rna N/A GO:0003735 ... S8GIU7 39827269
    991379 9i05:Ai (2.2) BS08 rna N/A GO:0003735 ... S8GIU7 39827269
    991380 9i05:Aj (2.2) BS01 rna N/A GO:0003735 ... A0A125YNI9 39827269
    991381 9i05:Aj (2.2) BS02 rna N/A GO:0003735 ... A0A125YNI9 39827269
    991382 9i05:Aj (2.2) BS03 rna N/A GO:0003735 ... A0A125YNI9 39827269
    991383 9i05:Ak (2.2) BS01 rna N/A GO:0003735 ... A0A125YFY0 39827269
    991384 9i05:Ak (2.2) BS02 rna N/A GO:0003735 ... A0A125YFY0 39827269
    991385 9i05:Ak (2.2) BS03 rna N/A GO:0003735 ... A0A125YFY0 39827269
    991386 9i05:Ak (2.2) BS04 rna N/A GO:0003735 ... A0A125YFY0 39827269
    991387 9i05:Ak (2.2) BS05 rna N/A GO:0003735 ... A0A125YFY0 39827269
    991388 9i05:Ak (2.2) BS06 rna N/A GO:0003735 ... A0A125YFY0 39827269
    991389 9i05:Al (2.2) BS01 rna N/A GO:0003735 ... S8GBY9 39827269
    991390 9i05:Al (2.2) BS02 rna N/A GO:0003735 ... S8GBY9 39827269
    991391 9i05:Al (2.2) BS03 rna N/A GO:0003735 ... S8GBY9 39827269
    991392 9i05:Al (2.2) BS04 rna N/A GO:0003735 ... S8GBY9 39827269
    991393 9i05:Al (2.2) BS05 rna N/A GO:0003735 ... S8GBY9 39827269
    991394 9i05:Al (2.2) BS06 rna N/A GO:0003735 ... S8GBY9 39827269
    991395 9i05:Al (2.2) BS07 rna N/A GO:0003735 ... S8GBY9 39827269
    991396 9i05:Al (2.2) BS08 rna N/A GO:0003735 ... S8GBY9 39827269
    991397 9i05:Al (2.2) BS09 rna N/A GO:0003735 ... S8GBY9 39827269
    991398 9i05:Am (2.2) BS01 rna N/A GO:0003735 ... A0A125YU12 39827269
    991399 9i05:Am (2.2) BS02 rna N/A GO:0003735 ... A0A125YU12 39827269
    991400 9i05:Am (2.2) BS03 rna N/A GO:0003735 ... A0A125YU12 39827269

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).