SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    991601 9i06:I (3.2) BS01 NAD N/A N/A P12860 N/A
    991602 9i06:J (3.2) BS01 NAD N/A N/A P19866 N/A
    991603 9i06:K (3.2) BS01 NAD N/A N/A P12860 N/A
    991604 9i06:K (3.2) BS02 NAD N/A N/A P12860 N/A
    991605 9i06:L (3.2) BS01 NAD N/A N/A P19866 N/A
    991606 9i06:O (3.2) BS01 NAD N/A N/A P12860 N/A
    991607 9i06:O (3.2) BS02 NAD N/A N/A P12860 N/A
    991608 9i06:P (3.2) BS01 NAD N/A N/A P19866 N/A
    991609 9i06:Q (3.2) BS01 NAD N/A N/A P12860 N/A
    991610 9i06:Q (3.2) BS02 NAD N/A N/A P12860 N/A
    991611 9i06:R (3.2) BS01 NAD N/A N/A P19866 N/A
    991612 9i07:A (3.1) BS01 NAD N/A N/A P12860 N/A
    991613 9i07:A (3.1) BS02 NAD N/A N/A P12860 N/A
    991614 9i07:B (3.1) BS01 NAD N/A N/A P19866 N/A
    991615 9i07:C (3.1) BS01 NAD N/A N/A P12860 N/A
    991616 9i07:C (3.1) BS02 NAD N/A N/A P12860 N/A
    991617 9i07:D (3.1) BS01 NAD N/A N/A P19866 N/A
    991618 9i07:E (3.1) BS01 NAD N/A N/A P12860 N/A
    991619 9i07:E (3.1) BS02 NAD N/A N/A P12860 N/A
    991620 9i07:F (3.1) BS01 NAD N/A N/A P19866 N/A
    991621 9i07:G (3.1) BS01 NAD N/A N/A P12860 N/A
    991622 9i07:G (3.1) BS02 NAD N/A N/A P12860 N/A
    991623 9i07:H (3.1) BS01 NAD N/A N/A P19866 N/A
    991624 9i07:I (3.1) BS01 NAD N/A N/A P12860 N/A
    991625 9i07:I (3.1) BS02 NAD N/A N/A P12860 N/A
    991626 9i07:J (3.1) BS01 NAD N/A N/A P19866 N/A
    991627 9i07:K (3.1) BS01 NAD N/A N/A P12860 N/A
    991628 9i07:K (3.1) BS02 NAD N/A N/A P12860 N/A
    991629 9i07:L (3.1) BS01 NAD N/A N/A P19866 N/A
    991630 9i07:O (3.1) BS01 NAD N/A N/A P12860 N/A
    991631 9i07:O (3.1) BS02 NAD N/A N/A P12860 N/A
    991632 9i07:P (3.1) BS01 NAD N/A N/A P19866 N/A
    991633 9i07:Q (3.1) BS01 NAD N/A N/A P12860 N/A
    991634 9i07:Q (3.1) BS02 NAD N/A N/A P12860 N/A
    991635 9i07:R (3.1) BS01 NAD N/A N/A P19866 N/A
    991636 9i09:A (1.99) BS01 POL N/A N/A N/A 41071934
    991637 9i0a:A (2.22) BS01 A1IZI N/A N/A Q9WVG6 N/A
    991638 9i0a:B (2.22) BS01 A1IZI N/A N/A Q9WVG6 N/A
    991639 9i0a:C (2.22) BS01 A1IZI N/A N/A Q9WVG6 N/A
    991640 9i0a:D (2.22) BS01 A1IZI N/A N/A Q9WVG6 N/A
    991641 9i0e:A (1.65) BS01 peptide N/A N/A Q74CB3 N/A
    991642 9i0f:A (2.4) BS01 SF4 N/A N/A C1DH03 41238839
    991643 9i0f:A (2.4) BS02 S5Q N/A N/A C1DH03 41238839
    991644 9i0f:B (2.4) BS01 SF4 N/A N/A C1DH04 41238839
    991645 9i0f:B (2.4) BS02 MG N/A N/A C1DH04 41238839
    991646 9i0f:B (2.4) BS03 MG N/A N/A C1DH04 41238839
    991647 9i0f:C (2.4) BS01 SF4 N/A N/A C1DH03 41238839
    991648 9i0f:C (2.4) BS02 S5Q N/A N/A C1DH03 41238839
    991649 9i0f:D (2.4) BS01 MG N/A N/A C1DH04 41238839
    991650 9i0f:D (2.4) BS02 SF4 N/A N/A C1DH04 41238839
    991651 9i0f:D (2.4) BS03 MG N/A N/A C1DH04 41238839
    991652 9i0f:E (2.4) BS01 SF4 N/A N/A C1DH03 41238839
    991653 9i0f:E (2.4) BS02 S5Q N/A N/A C1DH03 41238839
    991654 9i0f:F (2.4) BS01 SF4 N/A N/A C1DH04 41238839
    991655 9i0f:F (2.4) BS02 MG N/A N/A C1DH04 41238839
    991656 9i0f:F (2.4) BS03 MG N/A N/A C1DH04 41238839
    991657 9i0f:G (2.4) BS01 SF4 N/A N/A C1DH03 41238839
    991658 9i0f:G (2.4) BS02 S5Q N/A N/A C1DH03 41238839
    991659 9i0f:H (2.4) BS01 MG N/A N/A C1DH04 41238839
    991660 9i0f:H (2.4) BS02 MG N/A N/A C1DH04 41238839
    991661 9i0f:H (2.4) BS03 SF4 N/A N/A C1DH04 41238839
    991662 9i0g:A (2.86) BS01 SF4 N/A GO:0009399 ... Q39XW3 41238839
    991663 9i0g:A (2.86) BS02 S5Q N/A GO:0009399 ... Q39XW3 41238839
    991664 9i0g:A (2.86) BS03 SF4 N/A GO:0009399 ... Q39XW3 41238839
    991665 9i0g:B (2.86) BS01 SF4 N/A GO:0009399 ... Q39XW3 41238839
    991666 9i0g:B (2.86) BS02 SF4 N/A GO:0009399 ... Q39XW3 41238839
    991667 9i0g:B (2.86) BS03 S5Q N/A GO:0009399 ... Q39XW3 41238839
    991668 9i0h:A (2.62) BS01 SF4 N/A GO:0009399 ... Q39XW3 41238839
    991669 9i0h:A (2.62) BS02 S5Q N/A GO:0009399 ... Q39XW3 41238839
    991670 9i0h:B (2.62) BS01 SF4 N/A GO:0009399 ... Q39XW3 41238839
    991671 9i0h:B (2.62) BS02 S5Q N/A GO:0009399 ... Q39XW3 41238839
    991672 9i0k:A (2.73) BS01 IMP N/A GO:0000166 ... P9WKI7 40107326
    991673 9i0k:A (2.73) BS02 NAD N/A GO:0000166 ... P9WKI7 40107326
    991674 9i0k:A (2.73) BS03 NAD N/A GO:0000166 ... P9WKI7 40107326
    991675 9i0k:B (2.73) BS01 NAD N/A GO:0000166 ... P9WKI7 40107326
    991676 9i0k:B (2.73) BS02 IMP N/A GO:0000166 ... P9WKI7 40107326
    991677 9i0k:B (2.73) BS03 NAD N/A GO:0000166 ... P9WKI7 40107326
    991678 9i0k:C (2.73) BS01 NAD N/A GO:0000166 ... P9WKI7 40107326
    991679 9i0k:C (2.73) BS02 IMP N/A GO:0000166 ... P9WKI7 40107326
    991680 9i0k:C (2.73) BS03 NAD N/A GO:0000166 ... P9WKI7 40107326
    991681 9i0k:D (2.73) BS01 NAD N/A GO:0000166 ... P9WKI7 40107326
    991682 9i0k:D (2.73) BS02 IMP N/A GO:0000166 ... P9WKI7 40107326
    991683 9i0k:D (2.73) BS03 NAD N/A GO:0000166 ... P9WKI7 40107326
    991684 9i0k:E (2.73) BS01 IMP N/A GO:0000166 ... P9WKI7 40107326
    991685 9i0k:E (2.73) BS02 NAD N/A GO:0000166 ... P9WKI7 40107326
    991686 9i0k:E (2.73) BS03 NAD N/A GO:0000166 ... P9WKI7 40107326
    991687 9i0k:F (2.73) BS01 IMP N/A GO:0000166 ... P9WKI7 40107326
    991688 9i0k:F (2.73) BS02 NAD N/A GO:0000166 ... P9WKI7 40107326
    991689 9i0k:F (2.73) BS03 NAD N/A GO:0000166 ... P9WKI7 40107326
    991690 9i0k:G (2.73) BS01 IMP N/A GO:0000166 ... P9WKI7 40107326
    991691 9i0k:G (2.73) BS02 NAD N/A GO:0000166 ... P9WKI7 40107326
    991692 9i0k:G (2.73) BS03 NAD N/A GO:0000166 ... P9WKI7 40107326
    991693 9i0k:H (2.73) BS01 NAD N/A GO:0000166 ... P9WKI7 40107326
    991694 9i0k:H (2.73) BS02 IMP N/A GO:0000166 ... P9WKI7 40107326
    991695 9i0k:H (2.73) BS03 NAD N/A GO:0000166 ... P9WKI7 40107326
    991696 9i0l:A (2.39) BS01 IMP N/A GO:0000166 ... P9WKI7 40107326
    991697 9i0l:A (2.39) BS02 NAD N/A GO:0000166 ... P9WKI7 40107326
    991698 9i0l:A (2.39) BS03 NAD N/A GO:0000166 ... P9WKI7 40107326
    991699 9i0l:B (2.39) BS01 NAD N/A GO:0000166 ... P9WKI7 40107326
    991700 9i0l:B (2.39) BS02 IMP N/A GO:0000166 ... P9WKI7 40107326
    991701 9i0l:B (2.39) BS03 NAD N/A GO:0000166 ... P9WKI7 40107326
    991702 9i0l:C (2.39) BS01 NAD N/A GO:0000166 ... P9WKI7 40107326
    991703 9i0l:C (2.39) BS02 IMP N/A GO:0000166 ... P9WKI7 40107326
    991704 9i0l:C (2.39) BS03 NAD N/A GO:0000166 ... P9WKI7 40107326
    991705 9i0l:D (2.39) BS01 NAD N/A GO:0000166 ... P9WKI7 40107326
    991706 9i0l:D (2.39) BS02 IMP N/A GO:0000166 ... P9WKI7 40107326
    991707 9i0l:D (2.39) BS03 NAD N/A GO:0000166 ... P9WKI7 40107326
    991708 9i0l:E (2.39) BS01 IMP N/A GO:0000166 ... P9WKI7 40107326
    991709 9i0l:E (2.39) BS02 NAD N/A GO:0000166 ... P9WKI7 40107326
    991710 9i0l:E (2.39) BS03 NAD N/A GO:0000166 ... P9WKI7 40107326
    991711 9i0l:F (2.39) BS01 IMP N/A GO:0000166 ... P9WKI7 40107326
    991712 9i0l:F (2.39) BS02 NAD N/A GO:0000166 ... P9WKI7 40107326
    991713 9i0l:F (2.39) BS03 NAD N/A GO:0000166 ... P9WKI7 40107326
    991714 9i0l:G (2.39) BS01 IMP N/A GO:0000166 ... P9WKI7 40107326
    991715 9i0l:G (2.39) BS02 NAD N/A GO:0000166 ... P9WKI7 40107326
    991716 9i0l:G (2.39) BS03 NAD N/A GO:0000166 ... P9WKI7 40107326
    991717 9i0l:H (2.39) BS01 IMP N/A GO:0000166 ... P9WKI7 40107326
    991718 9i0l:H (2.39) BS02 NAD N/A GO:0000166 ... P9WKI7 40107326
    991719 9i0m:A (3.01) BS01 IMP N/A GO:0000166 ... P9WKI7 40107326
    991720 9i0m:B (3.01) BS01 IMP N/A GO:0000166 ... P9WKI7 40107326
    991721 9i0m:C (3.01) BS01 IMP N/A GO:0000166 ... P9WKI7 40107326
    991722 9i0m:D (3.01) BS01 IMP N/A GO:0000166 ... P9WKI7 40107326
    991723 9i0m:E (3.01) BS01 IMP N/A GO:0000166 ... P9WKI7 40107326
    991724 9i0m:F (3.01) BS01 IMP N/A GO:0000166 ... P9WKI7 40107326
    991725 9i0m:G (3.01) BS01 IMP N/A GO:0000166 ... P9WKI7 40107326
    991726 9i0m:H (3.01) BS01 IMP N/A GO:0000166 ... P9WKI7 40107326
    991727 9i0o:A (3.36) BS01 peptide N/A GO:0005515 ... Q99523 N/A
    991728 9i0s:A (2.5) BS01 ZN N/A GO:0003676 ... A0JN36 40966504
    991729 9i0s:A (2.5) BS02 ADP N/A GO:0003676 ... A0JN36 40966504
    991730 9i0s:B (2.5) BS01 ZN N/A GO:0003676 ... A0JN36 40966504
    991731 9i0s:B (2.5) BS02 ADP N/A GO:0003676 ... A0JN36 40966504
    991732 9i0t:A (1.8) BS01 A1IZK N/A N/A Q14258 40365055
    991733 9i0u:A (1.46) BS01 A1IZJ N/A N/A Q9NZQ7 40666457
    991734 9i0u:B (1.46) BS01 A1IZJ N/A N/A Q9NZQ7 40666457
    991735 9i0v:A (2.02) BS01 rna N/A GO:0005737 ... Q9K492 N/A
    991736 9i0v:A (2.02) BS02 rna N/A GO:0005737 ... Q9K492 N/A
    991737 9i0v:B (2.02) BS01 rna N/A GO:0005737 ... Q9K492 N/A
    991738 9i0v:B (2.02) BS02 rna N/A GO:0005737 ... Q9K492 N/A
    991739 9i0w:A (2.1) BS01 A1IZP N/A N/A Q9NZQ7 40666457
    991740 9i0w:B (2.1) BS01 A1IZP N/A N/A Q9NZQ7 40666457
    991741 9i0z:A (1.55) BS01 A1IYU N/A GO:0004672 ... P68400 41571889
    991742 9i10:A (1.5) BS01 A1IYV N/A GO:0004672 ... P68400 41571889
    991743 9i11:A (1.6) BS01 A1IYW N/A GO:0004672 ... P68400 41571889
    991744 9i12:A (2.0) BS01 A1IYX N/A GO:0004672 ... P68400 41571889
    991745 9i13:A (1.75) BS01 A1IYY N/A GO:0004672 ... P68400 41571889
    991746 9i14:LA (3.34) BS01 rna N/A GO:0002181 ... P62917 N/A
    991747 9i14:LA (3.34) BS02 rna N/A GO:0002181 ... P62917 N/A
    991748 9i14:LB (3.34) BS01 rna N/A GO:0002181 ... P39023 N/A
    991749 9i14:LC (3.34) BS01 rna N/A GO:0002181 ... P36578 N/A
    991750 9i14:LC (3.34) BS02 rna N/A GO:0002181 ... P36578 N/A
    991751 9i14:LD (3.34) BS01 rna N/A GO:0000027 ... P46777 N/A
    991752 9i14:LD (3.34) BS02 rna N/A GO:0000027 ... P46777 N/A
    991753 9i14:LE (3.34) BS01 rna N/A GO:0002181 ... Q02878 N/A
    991754 9i14:LF (3.34) BS01 rna N/A GO:0000463 ... P18124 N/A
    991755 9i14:LF (3.34) BS02 rna N/A GO:0000463 ... P18124 N/A
    991756 9i14:LG (3.34) BS01 rna N/A GO:0000470 ... P62424 N/A
    991757 9i14:LG (3.34) BS02 rna N/A GO:0000470 ... P62424 N/A
    991758 9i14:LH (3.34) BS01 rna N/A GO:0002181 ... P32969 N/A
    991759 9i14:LI (3.34) BS01 rna N/A GO:0000122 ... P27635 N/A
    991760 9i14:LI (3.34) BS02 rna N/A GO:0000122 ... P27635 N/A
    991761 9i14:LI (3.34) BS03 rna N/A GO:0000122 ... P27635 N/A
    991762 9i14:LJ (3.34) BS01 rna N/A GO:0000027 ... P62913 N/A
    991763 9i14:LJ (3.34) BS02 rna N/A GO:0000027 ... P62913 N/A
    991764 9i14:LL (3.34) BS01 rna N/A GO:0002181 ... P26373 N/A
    991765 9i14:LL (3.34) BS02 rna N/A GO:0002181 ... P26373 N/A
    991766 9i14:LM (3.34) BS01 rna N/A GO:0002181 ... P50914 N/A
    991767 9i14:LN (3.34) BS01 rna N/A GO:0002181 ... P61313 N/A
    991768 9i14:LN (3.34) BS02 rna N/A GO:0002181 ... P61313 N/A
    991769 9i14:LO (3.34) BS01 rna N/A GO:0002181 ... P40429 N/A
    991770 9i14:LP (3.34) BS01 rna N/A GO:0002181 ... P18621 N/A
    991771 9i14:LP (3.34) BS02 rna N/A GO:0002181 ... P18621 N/A
    991772 9i14:LQ (3.34) BS01 rna N/A GO:0002181 ... Q07020 N/A
    991773 9i14:LR (3.34) BS01 rna N/A GO:0002181 ... P84098 N/A
    991774 9i14:LR (3.34) BS02 rna N/A GO:0002181 ... P84098 N/A
    991775 9i14:LS (3.34) BS01 rna N/A GO:0002181 ... Q02543 N/A
    991776 9i14:LS (3.34) BS02 rna N/A GO:0002181 ... Q02543 N/A
    991777 9i14:LT (3.34) BS01 rna N/A GO:0001650 ... P46778 N/A
    991778 9i14:LT (3.34) BS02 rna N/A GO:0001650 ... P46778 N/A
    991779 9i14:LT (3.34) BS03 MG N/A GO:0001650 ... P46778 N/A
    991780 9i14:LU (3.34) BS01 rna N/A GO:0002181 ... P35268 N/A
    991781 9i14:LV (3.34) BS01 rna N/A GO:0000122 ... P62829 N/A
    991782 9i14:LV (3.34) BS02 rna N/A GO:0000122 ... P62829 N/A
    991783 9i14:LW (3.34) BS01 rna N/A GO:0002181 ... P83731 N/A
    991784 9i14:LX (3.34) BS01 rna N/A GO:0002181 ... P62750 N/A
    991785 9i14:LX (3.34) BS02 rna N/A GO:0002181 ... P62750 N/A
    991786 9i14:LY (3.34) BS01 rna N/A GO:0002181 ... P61254 N/A
    991787 9i14:LY (3.34) BS02 rna N/A GO:0002181 ... P61254 N/A
    991788 9i14:LZ (3.34) BS01 rna N/A GO:0002181 ... P61353 N/A
    991789 9i14:La (3.34) BS01 rna N/A GO:0002181 ... P46776 N/A
    991790 9i14:Lb (3.34) BS01 rna N/A GO:0002181 ... P47914 N/A
    991791 9i14:Lc (3.34) BS01 rna N/A GO:0002181 ... P62888 N/A
    991792 9i14:Ld (3.34) BS01 rna N/A GO:0002181 ... P62899 N/A
    991793 9i14:Le (3.34) BS01 rna N/A GO:0002181 ... P62910 N/A
    991794 9i14:Lf (3.34) BS01 rna N/A GO:0002181 ... P18077 N/A
    991795 9i14:Lg (3.34) BS01 rna N/A GO:0002181 ... P49207 N/A
    991796 9i14:Lg (3.34) BS02 ZN N/A GO:0002181 ... P49207 N/A
    991797 9i14:Lh (3.34) BS01 rna N/A GO:0000463 ... P42766 N/A
    991798 9i14:Lh (3.34) BS02 rna N/A GO:0000463 ... P42766 N/A
    991799 9i14:Li (3.34) BS01 rna N/A GO:0002181 ... Q9Y3U8 N/A
    991800 9i14:Lj (3.34) BS01 rna N/A GO:0000448 ... P61927 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).