SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    99001 2ox3:A (2.18) BS01 F6P 3.1.3.11 GO:0000287 ... P0A993 17314096
    99002 2ox3:A (2.18) BS02 PEP 3.1.3.11 GO:0000287 ... P0A993 17314096
    99003 2ox4:A (1.8) BS01 MG 5.1.2.2 GO:0003824 ... Q5NN22 N/A
    99004 2ox4:B (1.8) BS01 MG 5.1.2.2 GO:0003824 ... Q5NN22 N/A
    99005 2ox4:C (1.8) BS01 MG 5.1.2.2 GO:0003824 ... Q5NN22 N/A
    99006 2ox4:D (1.8) BS01 MG 5.1.2.2 GO:0003824 ... Q5NN22 N/A
    99007 2ox4:E (1.8) BS01 MG 5.1.2.2 GO:0003824 ... Q5NN22 N/A
    99008 2ox4:F (1.8) BS01 MG 5.1.2.2 GO:0003824 ... Q5NN22 N/A
    99009 2ox4:G (1.8) BS01 MG 5.1.2.2 GO:0003824 ... Q5NN22 N/A
    99010 2ox4:H (1.8) BS01 MG 5.1.2.2 GO:0003824 ... Q5NN22 N/A
    99011 2ox6:A (1.7) BS01 MG ? GO:0003677 ... Q8EAP9 N/A
    99012 2ox8:A (2.5) BS01 ZN ? N/A Q5KU26 17420244
    99013 2ox8:A (2.5) BS02 ZN ? N/A Q5KU26 17420244
    99014 2ox8:A (2.5) BS03 ZN ? N/A Q5KU26 17420244
    99015 2ox8:A (2.5) BS04 ZN ? N/A Q5KU26 17420244
    99016 2ox8:B (2.5) BS01 ZN ? N/A Q5KU26 17420244
    99017 2ox8:B (2.5) BS02 ZN ? N/A Q5KU26 17420244
    99018 2ox8:B (2.5) BS03 ZN ? N/A Q5KU26 17420244
    99019 2ox8:B (2.5) BS04 ZN ? N/A Q5KU26 17420244
    99020 2ox8:C (2.5) BS01 ZN ? N/A Q5KU26 17420244
    99021 2ox8:C (2.5) BS02 CA ? N/A Q5KU26 17420244
    99022 2ox8:C (2.5) BS03 CA ? N/A Q5KU26 17420244
    99023 2ox8:C (2.5) BS04 CA ? N/A Q5KU26 17420244
    99024 2ox8:D (2.5) BS01 ZN ? N/A Q5KU26 17420244
    99025 2ox8:D (2.5) BS02 CA ? N/A Q5KU26 17420244
    99026 2ox8:D (2.5) BS03 CA ? N/A Q5KU26 17420244
    99027 2ox8:D (2.5) BS04 CA ? N/A Q5KU26 17420244
    99028 2ox9:A (1.95) BS01 FUC ? N/A Q8K4Q8 17420244
    99029 2ox9:A (1.95) BS02 GAL ? N/A Q8K4Q8 17420244
    99030 2ox9:A (1.95) BS03 CA ? N/A Q8K4Q8 17420244
    99031 2ox9:A (1.95) BS04 CA ? N/A Q8K4Q8 17420244
    99032 2ox9:A (1.95) BS05 CA ? N/A Q8K4Q8 17420244
    99033 2ox9:A (1.95) BS06 CA ? N/A Q8K4Q8 17420244
    99034 2ox9:B (1.95) BS01 GAL ? N/A Q8K4Q8 17420244
    99035 2ox9:B (1.95) BS02 CA ? N/A Q8K4Q8 17420244
    99036 2ox9:B (1.95) BS03 CA ? N/A Q8K4Q8 17420244
    99037 2ox9:B (1.95) BS04 CA ? N/A Q8K4Q8 17420244
    99038 2ox9:B (1.95) BS05 CA ? N/A Q8K4Q8 17420244
    99039 2ox9:C (1.95) BS01 GAL ? N/A Q8K4Q8 17420244
    99040 2ox9:C (1.95) BS02 CA ? N/A Q8K4Q8 17420244
    99041 2ox9:C (1.95) BS03 CA ? N/A Q8K4Q8 17420244
    99042 2ox9:C (1.95) BS04 CA ? N/A Q8K4Q8 17420244
    99043 2ox9:C (1.95) BS05 CA ? N/A Q8K4Q8 17420244
    99044 2ox9:D (1.95) BS01 GAL ? N/A Q8K4Q8 17420244
    99045 2ox9:D (1.95) BS02 CA ? N/A Q8K4Q8 17420244
    99046 2ox9:D (1.95) BS03 CA ? N/A Q8K4Q8 17420244
    99047 2ox9:D (1.95) BS04 CA ? N/A Q8K4Q8 17420244
    99048 2ox9:D (1.95) BS05 CA ? N/A Q8K4Q8 17420244
    99049 2oxb:A (2.6) BS01 FRU 3.2.1.26 GO:0004553 ... Q43866 17963237
    99050 2oxc:A (1.3) BS01 ADP 3.6.1.15
    3.6.4.13
    GO:0003676 ... Q9UHI6 N/A
    99051 2oxc:B (1.3) BS01 ADP 3.6.1.15
    3.6.4.13
    GO:0003676 ... Q9UHI6 N/A
    99052 2oxd:A (2.3) BS01 K32 2.7.11.1 GO:0004672 ... P28523 17768728
    99053 2oxe:A (2.8) BS01 CA 3.1.1.26
    3.1.1.3
    GO:0004465 ... P54317 18702514
    99054 2oxe:B (2.8) BS01 MAN 3.1.1.26
    3.1.1.3
    GO:0004465 ... P54317 18702514
    99055 2oxe:B (2.8) BS02 CA 3.1.1.26
    3.1.1.3
    GO:0004465 ... P54317 18702514
    99056 2oxi:A (2.1) BS01 CU 1.1.1.1 GO:0004022 ... P00327 15299812
    99057 2oxi:A (2.1) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 15299812
    99058 2oxi:A (2.1) BS03 NAD 1.1.1.1 GO:0004022 ... P00327 15299812
    99059 2oxi:A (2.1) BS04 DMS 1.1.1.1 GO:0004022 ... P00327 15299812
    99060 2oxi:B (2.1) BS01 CU 1.1.1.1 GO:0004022 ... P00327 15299812
    99061 2oxi:B (2.1) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 15299812
    99062 2oxi:B (2.1) BS03 NAD 1.1.1.1 GO:0004022 ... P00327 15299812
    99063 2oxi:B (2.1) BS04 DMS 1.1.1.1 GO:0004022 ... P00327 15299812
    99064 2oxm:A (2.5) BS01 dna 3.2.2.27 GO:0004844 ... P13051 17704764
    99065 2oxn:A (1.7) BS01 OAN 3.2.1.52 GO:0004553 ... Q9KU37 17439950 MOAD: Ki=0.036uM
    99066 2oxp:A (2.0) BS01 THP 3.1.31.1 GO:0003676 ... Q8NXI6 17172297
    99067 2oxr:A (2.4) BS01 GDP 3.6.5.- GO:0003924 ... Q9UYR9 17468740
    99068 2oxs:A (1.32) BS01 CA 3.4.21.4 GO:0004175 ... P00760 N/A
    99069 2oxt:A (2.9) BS01 SAM 3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0004482 ... A0EKU1 17473012
    99070 2oxt:B (2.9) BS01 SAM 3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0004482 ... A0EKU1 17473012
    99071 2oxt:C (2.9) BS01 SAM 3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0004482 ... A0EKU1 17473012
    99072 2oxt:D (2.9) BS01 SAM 3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0004482 ... A0EKU1 17473012
    99073 2oxu:A (1.24) BS01 ZN 3.4.24.65 GO:0004222 ... P39900 17096442
    99074 2oxu:A (1.24) BS02 ZN 3.4.24.65 GO:0004222 ... P39900 17096442
    99075 2oxu:A (1.24) BS03 CA 3.4.24.65 GO:0004222 ... P39900 17096442
    99076 2oxu:A (1.24) BS04 CA 3.4.24.65 GO:0004222 ... P39900 17096442
    99077 2oxu:A (1.24) BS05 CA 3.4.24.65 GO:0004222 ... P39900 17096442
    99078 2oxv:A (1.95) BS01 dna 3.1.21.4 GO:0000287 ... P00642 17997963
    99079 2oxw:A (1.15) BS01 peptide 3.4.24.65 GO:0004222 ... P39900 17096442
    99080 2oxw:A (1.15) BS02 ZN 3.4.24.65 GO:0004222 ... P39900 17096442
    99081 2oxw:A (1.15) BS03 ZN 3.4.24.65 GO:0004222 ... P39900 17096442
    99082 2oxw:A (1.15) BS04 CA 3.4.24.65 GO:0004222 ... P39900 17096442
    99083 2oxw:A (1.15) BS05 CA 3.4.24.65 GO:0004222 ... P39900 17096442
    99084 2oxw:A (1.15) BS06 CA 3.4.24.65 GO:0004222 ... P39900 17096442
    99085 2oxx:A (2.3) BS01 K22 2.7.11.1 GO:0004672 ... P28523 17768728
    99086 2oxy:A (1.812) BS01 K17 2.7.11.1 GO:0004672 ... P28523 17768728
    99087 2oxy:B (1.812) BS01 K17 2.7.11.1 GO:0004672 ... P28523 17768728
    99088 2oxz:A (1.9) BS01 peptide 3.4.24.65 GO:0004222 ... P39900 17096442
    99089 2oxz:A (1.9) BS02 peptide 3.4.24.65 GO:0004222 ... P39900 17096442
    99090 2oxz:A (1.9) BS03 ZN 3.4.24.65 GO:0004222 ... P39900 17096442
    99091 2oxz:A (1.9) BS04 ZN 3.4.24.65 GO:0004222 ... P39900 17096442
    99092 2oxz:A (1.9) BS05 CA 3.4.24.65 GO:0004222 ... P39900 17096442
    99093 2oxz:A (1.9) BS06 CA 3.4.24.65 GO:0004222 ... P39900 17096442
    99094 2oxz:A (1.9) BS07 CA 3.4.24.65 GO:0004222 ... P39900 17096442
    99095 2oy0:A (2.8) BS01 SAH 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0004482 ... Q9Q6P4 17267492
    99096 2oy0:B (2.8) BS01 SAH 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0004482 ... Q9Q6P4 17267492
    99097 2oy2:A (1.5) BS01 peptide 3.4.24.34 GO:0004222 ... P22894 17096442
    99098 2oy2:A (1.5) BS02 CA 3.4.24.34 GO:0004222 ... P22894 17096442
    99099 2oy2:A (1.5) BS03 CA 3.4.24.34 GO:0004222 ... P22894 17096442
    99100 2oy2:A (1.5) BS04 ZN 3.4.24.34 GO:0004222 ... P22894 17096442
    99101 2oy2:A (1.5) BS05 ZN 3.4.24.34 GO:0004222 ... P22894 17096442
    99102 2oy2:F (1.5) BS01 peptide 3.4.24.34 GO:0004222 ... P22894 17096442
    99103 2oy2:F (1.5) BS02 CA 3.4.24.34 GO:0004222 ... P22894 17096442
    99104 2oy2:F (1.5) BS03 CA 3.4.24.34 GO:0004222 ... P22894 17096442
    99105 2oy2:F (1.5) BS04 ZN 3.4.24.34 GO:0004222 ... P22894 17096442
    99106 2oy2:F (1.5) BS05 ZN 3.4.24.34 GO:0004222 ... P22894 17096442
    99107 2oy3:A (1.78) BS01 MG ? GO:0016020 ... Q60754 17405873
    99108 2oy4:A (1.7) BS01 CA 3.4.24.34 GO:0004222 ... P22894 17096442
    99109 2oy4:A (1.7) BS02 CA 3.4.24.34 GO:0004222 ... P22894 17096442
    99110 2oy4:A (1.7) BS03 ZN 3.4.24.34 GO:0004222 ... P22894 17096442
    99111 2oy4:A (1.7) BS04 ZN 3.4.24.34 GO:0004222 ... P22894 17096442
    99112 2oy4:F (1.7) BS01 CA 3.4.24.34 GO:0004222 ... P22894 17096442
    99113 2oy4:F (1.7) BS02 CA 3.4.24.34 GO:0004222 ... P22894 17096442
    99114 2oy4:F (1.7) BS03 ZN 3.4.24.34 GO:0004222 ... P22894 17096442
    99115 2oy4:F (1.7) BS04 ZN 3.4.24.34 GO:0004222 ... P22894 17096442
    99116 2oyc:A (1.72) BS01 WO4 3.1.3.16
    3.1.3.74
    GO:0000287 ... Q96GD0 18058037
    99117 2oye:P (2.85) BS01 HEM 1.14.99.1 GO:0004601 ... P05979 17656360
    99118 2oye:P (2.85) BS02 IM8 1.14.99.1 GO:0004601 ... P05979 17656360 BindingDB: IC50=59000nM
    99119 2oyf:A (1.2) BS01 IAC 3.1.1.4 GO:0004623 ... P59071 N/A
    99120 2oyh:B (2.4) BS01 peptide ? GO:0005102 ... P02675 17411074
    99121 2oyh:B (2.4) BS02 CA ? GO:0005102 ... P02675 17411074
    99122 2oyh:C (2.4) BS01 peptide ? GO:0005102 ... P02679 17411074
    99123 2oyh:C (2.4) BS02 CA ? GO:0005102 ... P02679 17411074
    99124 2oyh:E (2.4) BS01 peptide ? GO:0005102 ... P02675 17411074
    99125 2oyh:E (2.4) BS02 CA ? GO:0005102 ... P02675 17411074
    99126 2oyh:F (2.4) BS01 peptide ? GO:0005102 ... P02679 17411074
    99127 2oyh:F (2.4) BS02 CA ? GO:0005102 ... P02679 17411074
    99128 2oyi:B (2.7) BS01 peptide ? GO:0005102 ... P02675 17411074
    99129 2oyi:B (2.7) BS02 CA ? GO:0005102 ... P02675 17411074
    99130 2oyi:C (2.7) BS01 peptide ? GO:0005102 ... P02679 17411074
    99131 2oyi:C (2.7) BS02 CA ? GO:0005102 ... P02679 17411074
    99132 2oyi:E (2.7) BS01 peptide ? GO:0005102 ... P02675 17411074
    99133 2oyi:E (2.7) BS02 CA ? GO:0005102 ... P02675 17411074
    99134 2oyi:F (2.7) BS01 peptide ? GO:0005102 ... P02679 17411074
    99135 2oyi:F (2.7) BS02 CA ? GO:0005102 ... P02679 17411074
    99136 2oyk:A (1.5) BS01 9MR 3.2.1.123 GO:0000272 ... A0ACD6B832 17487923 MOAD: Ki=5uM
    99137 2oyk:B (1.5) BS01 9MR 3.2.1.123 GO:0000272 ... A0ACD6B832 17487923 MOAD: Ki=5uM
    99138 2oyl:A (1.8) BS01 IDC 3.2.1.123 GO:0000272 ... A0ACD6B832 17487923 MOAD: Ki=0.5uM
    99139 2oyl:B (1.8) BS01 IDC 3.2.1.123 GO:0000272 ... A0ACD6B832 17487923 MOAD: Ki=0.5uM
    99140 2oym:A (1.86) BS01 MNI 3.2.1.123 GO:0000272 ... A0ACD6B832 17487923 MOAD: Ki=10uM
    99141 2oym:B (1.86) BS01 MNI 3.2.1.123 GO:0000272 ... A0ACD6B832 17487923 MOAD: Ki=10uM
    99142 2oyn:A (1.85) BS01 CDP 2.7.1.161 GO:0000166 ... Q60365 N/A
    99143 2oyq:A (2.86) BS01 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 17718515
    99144 2oyq:A (2.86) BS02 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 17718515
    99145 2oyq:A (2.86) BS03 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 17718515
    99146 2oyq:A (2.86) BS04 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 17718515
    99147 2oyq:A (2.86) BS05 N5P 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 17718515
    99148 2oyq:A (2.86) BS06 N5P 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 17718515
    99149 2oyq:B (2.86) BS01 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 17718515
    99150 2oyq:C (2.86) BS01 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 17718515
    99151 2oyq:C (2.86) BS02 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 17718515
    99152 2oyq:C (2.86) BS03 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 17718515
    99153 2oyq:C (2.86) BS04 N5P 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 17718515
    99154 2oyq:D (2.86) BS01 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 17718515
    99155 2oyr:A (2.0) BS01 SAH 2.1.1.242 GO:0005737 ... Q7UAV7 N/A
    99156 2oys:A (2.0) BS01 FMN ? GO:0016491 ... A0A0H2URW2 17588214
    99157 2oys:B (2.0) BS01 FMN ? GO:0016491 ... A0A0H2URW2 17588214
    99158 2oyt:A (2.0) BS01 dna 3.2.2.27 GO:0004844 ... P13051 17704764
    99159 2oyt:A (2.0) BS02 dna 3.2.2.27 GO:0004844 ... P13051 17704764
    99160 2oyu:P (2.7) BS01 IMS 1.14.99.1 GO:0004601 ... P05979 17656360 BindingDB: IC50=350nM
    99161 2oyu:P (2.7) BS02 HEM 1.14.99.1 GO:0004601 ... P05979 17656360
    99162 2oyy:A (2.5) BS01 HEM ? N/A Q5LL55 17395199
    99163 2oyy:A (2.5) BS02 HEM ? N/A Q5LL55 17395199
    99164 2oyy:A (2.5) BS03 HEM ? N/A Q5LL55 17395199
    99165 2oyy:B (2.5) BS01 HEM ? N/A Q5LL55 17395199
    99166 2oyy:B (2.5) BS02 HEM ? N/A Q5LL55 17395199
    99167 2oyy:C (2.5) BS01 HEM ? N/A Q5LL55 17395199
    99168 2oyy:C (2.5) BS02 HEM ? N/A Q5LL55 17395199
    99169 2oyy:D (2.5) BS01 HEM ? N/A Q5LL55 17395199
    99170 2oyy:D (2.5) BS02 HEM ? N/A Q5LL55 17395199
    99171 2oyy:D (2.5) BS03 HEM ? N/A Q5LL55 17395199
    99172 2oyy:E (2.5) BS01 HEM ? N/A Q5LL55 17395199
    99173 2oyy:E (2.5) BS02 HEM ? N/A Q5LL55 17395199
    99174 2oyy:F (2.5) BS01 HEM ? N/A Q5LL55 17395199
    99175 2oyy:F (2.5) BS02 HEM ? N/A Q5LL55 17395199
    99176 2oyy:F (2.5) BS03 HEM ? N/A Q5LL55 17395199
    99177 2oyy:G (2.5) BS01 HEM ? N/A Q5LL55 17395199
    99178 2oyy:G (2.5) BS02 HEM ? N/A Q5LL55 17395199
    99179 2oyy:H (2.5) BS01 HEM ? N/A Q5LL55 17395199
    99180 2oyy:H (2.5) BS02 HEM ? N/A Q5LL55 17395199
    99181 2oyy:H (2.5) BS03 HEM ? N/A Q5LL55 17395199
    99182 2oz0:A (2.8) BS01 HEM 1.1.2.3 GO:0016491 ... P00175 17563122
    99183 2oz0:A (2.8) BS02 FMN 1.1.2.3 GO:0016491 ... P00175 17563122
    99184 2oz0:B (2.8) BS01 FMN 1.1.2.3 GO:0016491 ... P00175 17563122
    99185 2oz0:B (2.8) BS02 PYR 1.1.2.3 GO:0016491 ... P00175 17563122
    99186 2oz1:A (2.35) BS01 HEC 2.8.5.2 GO:0004792 ... Q939U1 N/A
    99187 2oz1:A (2.35) BS02 HEC 2.8.5.2 GO:0004792 ... Q939U1 N/A
    99188 2oz1:B (2.35) BS01 HEC ? GO:0009055 ... Q939U4 N/A
    99189 2oz1:C (2.35) BS01 HEC 2.8.5.2 GO:0004792 ... Q939U1 N/A
    99190 2oz1:C (2.35) BS02 HEC 2.8.5.2 GO:0004792 ... Q939U1 N/A
    99191 2oz1:D (2.35) BS01 HEC ? GO:0009055 ... Q939U4 N/A
    99192 2oz1:E (2.35) BS01 HEC 2.8.5.2 GO:0004792 ... Q939U1 N/A
    99193 2oz1:E (2.35) BS02 HEC 2.8.5.2 GO:0004792 ... Q939U1 N/A
    99194 2oz1:F (2.35) BS01 HEC ? GO:0009055 ... Q939U4 N/A
    99195 2oz1:G (2.35) BS01 HEC 2.8.5.2 GO:0004792 ... Q939U1 N/A
    99196 2oz1:G (2.35) BS02 HEC 2.8.5.2 GO:0004792 ... Q939U1 N/A
    99197 2oz1:H (2.35) BS01 HEC ? GO:0009055 ... Q939U4 N/A
    99198 2oz2:A (1.95) BS01 D1R 3.4.22.51 GO:0006508 ... P25779 19620707
    99199 2oz2:C (1.95) BS01 D1R 3.4.22.51 GO:0006508 ... P25779 19620707
    99200 2oz5:A (2.0) BS01 7XY ? GO:0004438 ... P96830 17437721 MOAD: Ki=0.33uM
    BindingDB: IC50=440nM

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).