SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    992401 9i2v:A (2.07) BS01 A1IY9 N/A GO:0003824 ... O06543 40447188
    992402 9i2v:B (2.07) BS01 A1IY9 N/A GO:0003824 ... O06543 40447188
    992403 9i2v:B (2.07) BS02 A1IY9 N/A GO:0003824 ... O06543 40447188
    992404 9i2v:C (2.07) BS01 A1IY9 N/A GO:0003824 ... O06543 40447188
    992405 9i2v:C (2.07) BS02 A1IY9 N/A GO:0003824 ... O06543 40447188
    992406 9i2v:D (2.07) BS01 A1IY9 N/A GO:0003824 ... O06543 40447188
    992407 9i2v:D (2.07) BS02 A1IY9 N/A GO:0003824 ... O06543 40447188
    992408 9i2v:E (2.07) BS01 A1IY9 N/A GO:0003824 ... O06543 40447188
    992409 9i2v:F (2.07) BS01 A1IY9 N/A GO:0003824 ... O06543 40447188
    992410 9i2v:G (2.07) BS01 A1IY9 N/A GO:0003824 ... O06543 40447188
    992411 9i2v:G (2.07) BS02 A1IY9 N/A GO:0003824 ... O06543 40447188
    992412 9i2v:H (2.07) BS01 A1IY9 N/A GO:0003824 ... O06543 40447188
    992413 9i2v:I (2.07) BS01 A1IY9 N/A GO:0003824 ... O06543 40447188
    992414 9i2v:J (2.07) BS01 A1IY9 N/A GO:0003824 ... O06543 40447188
    992415 9i2v:J (2.07) BS02 A1IY9 N/A GO:0003824 ... O06543 40447188
    992416 9i2v:K (2.07) BS01 A1IY9 N/A GO:0003824 ... O06543 40447188
    992417 9i2v:L (2.07) BS01 A1IY9 N/A GO:0003824 ... O06543 40447188
    992418 9i2w:A (2.2) BS01 A1IZA N/A GO:0003824 ... O06543 40447188
    992419 9i2w:B (2.2) BS01 A1IZA N/A GO:0003824 ... O06543 40447188
    992420 9i2w:C (2.2) BS01 A1IZA N/A GO:0003824 ... O06543 40447188
    992421 9i2w:D (2.2) BS01 A1IZA N/A GO:0003824 ... O06543 40447188
    992422 9i2w:E (2.2) BS01 A1IZA N/A GO:0003824 ... O06543 40447188
    992423 9i2w:F (2.2) BS01 A1IZA N/A GO:0003824 ... O06543 40447188
    992424 9i2w:F (2.2) BS02 A1IZA N/A GO:0003824 ... O06543 40447188
    992425 9i2w:G (2.2) BS01 A1IZA N/A GO:0003824 ... O06543 40447188
    992426 9i2w:H (2.2) BS01 A1IZA N/A GO:0003824 ... O06543 40447188
    992427 9i2w:I (2.2) BS01 A1IZA N/A GO:0003824 ... O06543 40447188
    992428 9i2w:J (2.2) BS01 A1IZA N/A GO:0003824 ... O06543 40447188
    992429 9i2w:K (2.2) BS01 A1IZA N/A GO:0003824 ... O06543 40447188
    992430 9i2w:L (2.2) BS01 A1IZA N/A GO:0003824 ... O06543 40447188
    992431 9i2x:A (2.0) BS01 A1I1O N/A GO:0003824 ... O06543 40447188
    992432 9i2x:A (2.0) BS02 A1I1O N/A GO:0003824 ... O06543 40447188
    992433 9i2x:B (2.0) BS01 A1I1O N/A GO:0003824 ... O06543 40447188
    992434 9i2x:B (2.0) BS02 A1I1O N/A GO:0003824 ... O06543 40447188
    992435 9i2x:C (2.0) BS01 A1I1O N/A GO:0003824 ... O06543 40447188
    992436 9i2x:D (2.0) BS01 A1I1O N/A GO:0003824 ... O06543 40447188
    992437 9i2x:D (2.0) BS02 A1I1O N/A GO:0003824 ... O06543 40447188
    992438 9i2x:E (2.0) BS01 A1I1O N/A GO:0003824 ... O06543 40447188
    992439 9i2x:E (2.0) BS02 A1I1O N/A GO:0003824 ... O06543 40447188
    992440 9i2x:F (2.0) BS01 A1I1O N/A GO:0003824 ... O06543 40447188
    992441 9i2x:G (2.0) BS01 A1I1O N/A GO:0003824 ... O06543 40447188
    992442 9i2x:H (2.0) BS01 A1I1O N/A GO:0003824 ... O06543 40447188
    992443 9i2x:H (2.0) BS02 A1I1O N/A GO:0003824 ... O06543 40447188
    992444 9i2x:I (2.0) BS01 A1I1O N/A GO:0003824 ... O06543 40447188
    992445 9i2x:I (2.0) BS02 A1I1O N/A GO:0003824 ... O06543 40447188
    992446 9i2x:J (2.0) BS01 A1I1O N/A GO:0003824 ... O06543 40447188
    992447 9i2x:J (2.0) BS02 A1I1O N/A GO:0003824 ... O06543 40447188
    992448 9i2x:K (2.0) BS01 A1I1O N/A GO:0003824 ... O06543 40447188
    992449 9i2x:K (2.0) BS02 A1I1O N/A GO:0003824 ... O06543 40447188
    992450 9i2x:L (2.0) BS01 A1I1O N/A GO:0003824 ... O06543 40447188
    992451 9i2x:L (2.0) BS02 A1I1O N/A GO:0003824 ... O06543 40447188
    992452 9i2y:A (1.95) BS01 9DJ N/A GO:0004152 ... Q02127 N/A
    992453 9i2y:A (1.95) BS02 FMN N/A GO:0004152 ... Q02127 N/A
    992454 9i2z:A (2.11) BS01 A1IZB N/A GO:0003824 ... O06543 40447188
    992455 9i2z:B (2.11) BS01 A1IZB N/A GO:0003824 ... O06543 40447188
    992456 9i2z:C (2.11) BS01 A1IZB N/A GO:0003824 ... O06543 40447188
    992457 9i2z:D (2.11) BS01 A1IZB N/A GO:0003824 ... O06543 40447188
    992458 9i2z:E (2.11) BS01 A1IZB N/A GO:0003824 ... O06543 40447188
    992459 9i2z:F (2.11) BS01 A1IZB N/A GO:0003824 ... O06543 40447188
    992460 9i2z:G (2.11) BS01 A1IZB N/A GO:0003824 ... O06543 40447188
    992461 9i2z:G (2.11) BS02 A1IZB N/A GO:0003824 ... O06543 40447188
    992462 9i2z:H (2.11) BS01 A1IZB N/A GO:0003824 ... O06543 40447188
    992463 9i2z:I (2.11) BS01 A1IZB N/A GO:0003824 ... O06543 40447188
    992464 9i2z:J (2.11) BS01 A1IZB N/A GO:0003824 ... O06543 40447188
    992465 9i2z:K (2.11) BS01 A1IZB N/A GO:0003824 ... O06543 40447188
    992466 9i2z:L (2.11) BS01 A1IZB N/A GO:0003824 ... O06543 40447188
    992467 9i30:A (2.08) BS01 A1IZD N/A GO:0003824 ... O06543 40447188
    992468 9i30:B (2.08) BS01 A1IZD N/A GO:0003824 ... O06543 40447188
    992469 9i30:B (2.08) BS02 A1IZD N/A GO:0003824 ... O06543 40447188
    992470 9i30:C (2.08) BS01 A1IZD N/A GO:0003824 ... O06543 40447188
    992471 9i30:D (2.08) BS01 A1IZD N/A GO:0003824 ... O06543 40447188
    992472 9i30:E (2.08) BS01 A1IZD N/A GO:0003824 ... O06543 40447188
    992473 9i30:E (2.08) BS02 A1IZD N/A GO:0003824 ... O06543 40447188
    992474 9i30:F (2.08) BS01 A1IZD N/A GO:0003824 ... O06543 40447188
    992475 9i30:F (2.08) BS02 A1IZD N/A GO:0003824 ... O06543 40447188
    992476 9i30:G (2.08) BS01 A1IZD N/A GO:0003824 ... O06543 40447188
    992477 9i30:G (2.08) BS02 A1IZD N/A GO:0003824 ... O06543 40447188
    992478 9i30:H (2.08) BS01 A1IZD N/A GO:0003824 ... O06543 40447188
    992479 9i30:H (2.08) BS02 A1IZD N/A GO:0003824 ... O06543 40447188
    992480 9i30:I (2.08) BS01 A1IZD N/A GO:0003824 ... O06543 40447188
    992481 9i30:I (2.08) BS02 A1IZD N/A GO:0003824 ... O06543 40447188
    992482 9i30:J (2.08) BS01 A1IZD N/A GO:0003824 ... O06543 40447188
    992483 9i30:K (2.08) BS01 A1IZD N/A GO:0003824 ... O06543 40447188
    992484 9i30:K (2.08) BS02 A1IZD N/A GO:0003824 ... O06543 40447188
    992485 9i30:L (2.08) BS01 A1IZD N/A GO:0003824 ... O06543 40447188
    992486 9i31:A (1.88) BS01 ACO N/A GO:0003824 ... O06543 40447188
    992487 9i31:B (1.88) BS01 ACO N/A GO:0003824 ... O06543 40447188
    992488 9i31:C (1.88) BS01 ACO N/A GO:0003824 ... O06543 40447188
    992489 9i31:D (1.88) BS01 ACO N/A GO:0003824 ... O06543 40447188
    992490 9i31:E (1.88) BS01 ACO N/A GO:0003824 ... O06543 40447188
    992491 9i31:F (1.88) BS01 ACO N/A GO:0003824 ... O06543 40447188
    992492 9i31:G (1.88) BS01 ACO N/A GO:0003824 ... O06543 40447188
    992493 9i31:H (1.88) BS01 ACO N/A GO:0003824 ... O06543 40447188
    992494 9i31:I (1.88) BS01 ACO N/A GO:0003824 ... O06543 40447188
    992495 9i31:J (1.88) BS01 ACO N/A GO:0003824 ... O06543 40447188
    992496 9i31:K (1.88) BS01 ACO N/A GO:0003824 ... O06543 40447188
    992497 9i31:L (1.88) BS01 ACO N/A GO:0003824 ... O06543 40447188
    992498 9i32:A (1.94) BS01 CO6 N/A GO:0003824 ... O06543 40447188
    992499 9i32:B (1.94) BS01 CO6 N/A GO:0003824 ... O06543 40447188
    992500 9i32:C (1.94) BS01 CO6 N/A GO:0003824 ... O06543 40447188
    992501 9i32:D (1.94) BS01 CO6 N/A GO:0003824 ... O06543 40447188
    992502 9i32:E (1.94) BS01 CO6 N/A GO:0003824 ... O06543 40447188
    992503 9i32:F (1.94) BS01 CO6 N/A GO:0003824 ... O06543 40447188
    992504 9i32:G (1.94) BS01 CO6 N/A GO:0003824 ... O06543 40447188
    992505 9i32:H (1.94) BS01 CO6 N/A GO:0003824 ... O06543 40447188
    992506 9i32:I (1.94) BS01 CO6 N/A GO:0003824 ... O06543 40447188
    992507 9i32:J (1.94) BS01 CO6 N/A GO:0003824 ... O06543 40447188
    992508 9i32:K (1.94) BS01 CO6 N/A GO:0003824 ... O06543 40447188
    992509 9i32:L (1.94) BS01 CO6 N/A GO:0003824 ... O06543 40447188
    992510 9i33:A (2.02) BS01 BCO N/A GO:0003824 ... O06543 40447188
    992511 9i33:B (2.02) BS01 BCO N/A GO:0003824 ... O06543 40447188
    992512 9i33:C (2.02) BS01 BCO N/A GO:0003824 ... O06543 40447188
    992513 9i33:D (2.02) BS01 BCO N/A GO:0003824 ... O06543 40447188
    992514 9i33:E (2.02) BS01 BCO N/A GO:0003824 ... O06543 40447188
    992515 9i33:F (2.02) BS01 BCO N/A GO:0003824 ... O06543 40447188
    992516 9i33:G (2.02) BS01 BCO N/A GO:0003824 ... O06543 40447188
    992517 9i33:H (2.02) BS01 BCO N/A GO:0003824 ... O06543 40447188
    992518 9i33:I (2.02) BS01 BCO N/A GO:0003824 ... O06543 40447188
    992519 9i33:J (2.02) BS01 BCO N/A GO:0003824 ... O06543 40447188
    992520 9i33:K (2.02) BS01 BCO N/A GO:0003824 ... O06543 40447188
    992521 9i33:L (2.02) BS01 BCO N/A GO:0003824 ... O06543 40447188
    992522 9i34:A (1.95) BS01 HXC N/A GO:0003824 ... O06543 40447188
    992523 9i34:B (1.95) BS01 HXC N/A GO:0003824 ... O06543 40447188
    992524 9i34:C (1.95) BS01 HXC N/A GO:0003824 ... O06543 40447188
    992525 9i34:D (1.95) BS01 HXC N/A GO:0003824 ... O06543 40447188
    992526 9i34:E (1.95) BS01 HXC N/A GO:0003824 ... O06543 40447188
    992527 9i34:F (1.95) BS01 HXC N/A GO:0003824 ... O06543 40447188
    992528 9i34:G (1.95) BS01 HXC N/A GO:0003824 ... O06543 40447188
    992529 9i34:H (1.95) BS01 HXC N/A GO:0003824 ... O06543 40447188
    992530 9i34:I (1.95) BS01 HXC N/A GO:0003824 ... O06543 40447188
    992531 9i34:J (1.95) BS01 HXC N/A GO:0003824 ... O06543 40447188
    992532 9i34:K (1.95) BS01 HXC N/A GO:0003824 ... O06543 40447188
    992533 9i34:L (1.95) BS01 HXC N/A GO:0003824 ... O06543 40447188
    992534 9i35:A (2.08) BS01 CO8 N/A GO:0003824 ... O06543 40447188
    992535 9i35:B (2.08) BS01 CO8 N/A GO:0003824 ... O06543 40447188
    992536 9i35:C (2.08) BS01 CO8 N/A GO:0003824 ... O06543 40447188
    992537 9i35:D (2.08) BS01 CO8 N/A GO:0003824 ... O06543 40447188
    992538 9i35:E (2.08) BS01 CO8 N/A GO:0003824 ... O06543 40447188
    992539 9i35:F (2.08) BS01 CO8 N/A GO:0003824 ... O06543 40447188
    992540 9i35:G (2.08) BS01 CO8 N/A GO:0003824 ... O06543 40447188
    992541 9i35:H (2.08) BS01 CO8 N/A GO:0003824 ... O06543 40447188
    992542 9i35:I (2.08) BS01 CO8 N/A GO:0003824 ... O06543 40447188
    992543 9i35:J (2.08) BS01 CO8 N/A GO:0003824 ... O06543 40447188
    992544 9i35:K (2.08) BS01 CO8 N/A GO:0003824 ... O06543 40447188
    992545 9i35:L (2.08) BS01 CO8 N/A GO:0003824 ... O06543 40447188
    992546 9i36:A (2.08) BS01 MFK N/A GO:0003824 ... O06543 40447188
    992547 9i36:B (2.08) BS01 MFK N/A GO:0003824 ... O06543 40447188
    992548 9i36:C (2.08) BS01 MFK N/A GO:0003824 ... O06543 40447188
    992549 9i36:D (2.08) BS01 MFK N/A GO:0003824 ... O06543 40447188
    992550 9i36:E (2.08) BS01 MFK N/A GO:0003824 ... O06543 40447188
    992551 9i36:F (2.08) BS01 MFK N/A GO:0003824 ... O06543 40447188
    992552 9i36:G (2.08) BS01 MFK N/A GO:0003824 ... O06543 40447188
    992553 9i36:H (2.08) BS01 MFK N/A GO:0003824 ... O06543 40447188
    992554 9i36:I (2.08) BS01 MFK N/A GO:0003824 ... O06543 40447188
    992555 9i36:J (2.08) BS01 MFK N/A GO:0003824 ... O06543 40447188
    992556 9i36:K (2.08) BS01 MFK N/A GO:0003824 ... O06543 40447188
    992557 9i36:L (2.08) BS01 MFK N/A GO:0003824 ... O06543 40447188
    992558 9i37:G (3.28) BS01 peptide N/A N/A A0A6F8TDQ5 41654547
    992559 9i37:H (3.28) BS01 peptide N/A N/A A0A6F8TDQ5 41654547
    992560 9i38:A (-1.00) BS01 FDD N/A N/A N/A N/A
    992561 9i3f:A (1.9) BS01 peptide N/A N/A O95994 41135511
    992562 9i3f:A (1.9) BS02 peptide N/A N/A O95994 41135511
    992563 9i3f:B (1.9) BS01 peptide N/A N/A O95994 41135511
    992564 9i3f:B (1.9) BS02 peptide N/A N/A O95994 41135511
    992565 9i3f:C (1.9) BS01 peptide N/A N/A O95994 41135511
    992566 9i3f:D (1.9) BS01 peptide N/A N/A O95994 41135511
    992567 9i3g:A (2.383) BS01 A1IZN N/A N/A Q8KRS7 N/A
    992568 9i3g:A (2.383) BS02 A1IZN N/A N/A Q8KRS7 N/A
    992569 9i3g:B (2.383) BS01 A1I1F N/A N/A Q8KRS7 N/A
    992570 9i3g:B (2.383) BS02 A1I1F N/A N/A Q8KRS7 N/A
    992571 9i3g:C (2.383) BS01 A1IZN N/A N/A Q8KRS7 N/A
    992572 9i3g:C (2.383) BS02 A1IZN N/A N/A Q8KRS7 N/A
    992573 9i3h:B (2.5) BS01 peptide N/A N/A Q86119 N/A
    992574 9i3h:C (2.5) BS01 peptide N/A N/A Q86119 N/A
    992575 9i3i:2 (4.4) BS01 dna N/A GO:0000727 ... P29469 40588661
    992576 9i3i:2 (4.4) BS02 ADP N/A GO:0000727 ... P29469 40588661
    992577 9i3i:2 (4.4) BS03 ADP N/A GO:0000727 ... P29469 40588661
    992578 9i3i:3 (4.4) BS01 dna N/A GO:0000727 ... P24279 40588661
    992579 9i3i:3 (4.4) BS02 ADP N/A GO:0000727 ... P24279 40588661
    992580 9i3i:4 (4.4) BS01 ZN N/A GO:0000727 ... P30665 40588661
    992581 9i3i:5 (4.4) BS01 ADP N/A GO:0000727 ... P29496 40588661
    992582 9i3i:5 (4.4) BS02 ADP N/A GO:0000727 ... P29496 40588661
    992583 9i3i:5 (4.4) BS03 ZN N/A GO:0000727 ... P29496 40588661
    992584 9i3i:6 (4.4) BS01 dna N/A GO:0000727 ... P53091 40588661
    992585 9i3i:7 (4.4) BS01 dna N/A GO:0000727 ... P38132 40588661
    992586 9i3i:7 (4.4) BS02 ADP N/A GO:0000727 ... P38132 40588661
    992587 9i3i:7 (4.4) BS03 ZN N/A GO:0000727 ... P38132 40588661
    992588 9i3i:A (4.4) BS01 dna N/A GO:0003682 ... P54784 40588661
    992589 9i3i:A (4.4) BS02 dna N/A GO:0003682 ... P54784 40588661
    992590 9i3i:A (4.4) BS03 ATP N/A GO:0003682 ... P54784 40588661
    992591 9i3i:B (4.4) BS01 dna N/A GO:0000781 ... P32833 40588661
    992592 9i3i:B (4.4) BS02 dna N/A GO:0000781 ... P32833 40588661
    992593 9i3i:C (4.4) BS01 dna N/A GO:0003677 ... P54790 40588661
    992594 9i3i:D (4.4) BS01 dna N/A GO:0000808 ... P54791 40588661
    992595 9i3i:D (4.4) BS02 dna N/A GO:0000808 ... P54791 40588661
    992596 9i3i:D (4.4) BS03 ATP N/A GO:0000808 ... P54791 40588661
    992597 9i3i:D (4.4) BS04 ATP N/A GO:0000808 ... P54791 40588661
    992598 9i3i:E (4.4) BS01 dna N/A GO:0000808 ... P50874 40588661
    992599 9i3i:E (4.4) BS02 dna N/A GO:0000808 ... P50874 40588661
    992600 9i3i:E (4.4) BS03 ATP N/A GO:0000808 ... P50874 40588661

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).