SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    993001 9i4t:g (2.44) BS10 CHL N/A N/A N/A N/A
    993002 9i4t:g (2.44) BS11 CLA N/A N/A N/A N/A
    993003 9i4t:g (2.44) BS12 CLA N/A N/A N/A N/A
    993004 9i4t:g (2.44) BS13 CLA N/A N/A N/A N/A
    993005 9i4t:g (2.44) BS14 CHL N/A N/A N/A N/A
    993006 9i4t:g (2.44) BS15 CHL N/A N/A N/A N/A
    993007 9i4t:h (2.44) BS01 CLA N/A N/A N/A N/A
    993008 9i4t:h (2.44) BS02 CLA N/A N/A N/A N/A
    993009 9i4t:h (2.44) BS03 CLA N/A N/A N/A N/A
    993010 9i4t:h (2.44) BS04 CLA N/A N/A N/A N/A
    993011 9i4t:i (2.44) BS01 CLA N/A N/A N/A N/A
    993012 9i4t:k (2.44) BS01 CLA N/A N/A N/A N/A
    993013 9i4t:k (2.44) BS02 CLA N/A N/A N/A N/A
    993014 9i4t:k (2.44) BS03 CLA N/A N/A N/A N/A
    993015 9i4t:l (2.44) BS01 CLA N/A N/A N/A N/A
    993016 9i4t:n (2.44) BS01 CHL N/A N/A N/A N/A
    993017 9i4t:n (2.44) BS02 CLA N/A N/A N/A N/A
    993018 9i4t:n (2.44) BS03 CLA N/A N/A N/A N/A
    993019 9i4t:n (2.44) BS04 CLA N/A N/A N/A N/A
    993020 9i4t:n (2.44) BS05 CLA N/A N/A N/A N/A
    993021 9i4t:n (2.44) BS06 CHL N/A N/A N/A N/A
    993022 9i4t:n (2.44) BS07 CHL N/A N/A N/A N/A
    993023 9i4t:n (2.44) BS08 CHL N/A N/A N/A N/A
    993024 9i4t:n (2.44) BS09 CLA N/A N/A N/A N/A
    993025 9i4t:n (2.44) BS10 CLA N/A N/A N/A N/A
    993026 9i4t:n (2.44) BS11 CHL N/A N/A N/A N/A
    993027 9i4t:n (2.44) BS12 CLA N/A N/A N/A N/A
    993028 9i4t:n (2.44) BS13 CLA N/A N/A N/A N/A
    993029 9i4t:n (2.44) BS14 CHL N/A N/A N/A N/A
    993030 9i4t:n (2.44) BS15 CHL N/A N/A N/A N/A
    993031 9i4t:r (2.44) BS01 CHL N/A N/A N/A N/A
    993032 9i4t:r (2.44) BS02 CLA N/A N/A N/A N/A
    993033 9i4t:r (2.44) BS03 CLA N/A N/A N/A N/A
    993034 9i4t:r (2.44) BS04 CLA N/A N/A N/A N/A
    993035 9i4t:r (2.44) BS05 CLA N/A N/A N/A N/A
    993036 9i4t:r (2.44) BS06 CHL N/A N/A N/A N/A
    993037 9i4t:r (2.44) BS07 CLA N/A N/A N/A N/A
    993038 9i4t:r (2.44) BS08 CLA N/A N/A N/A N/A
    993039 9i4t:r (2.44) BS09 CLA N/A N/A N/A N/A
    993040 9i4t:r (2.44) BS10 CLA N/A N/A N/A N/A
    993041 9i4t:r (2.44) BS11 CLA N/A N/A N/A N/A
    993042 9i4t:r (2.44) BS12 CHL N/A N/A N/A N/A
    993043 9i4t:r (2.44) BS13 CLA N/A N/A N/A N/A
    993044 9i4t:r (2.44) BS14 CHL N/A N/A N/A N/A
    993045 9i4t:s (2.44) BS01 CLA N/A N/A N/A N/A
    993046 9i4t:s (2.44) BS02 CHL N/A N/A N/A N/A
    993047 9i4t:s (2.44) BS03 CLA N/A N/A N/A N/A
    993048 9i4t:s (2.44) BS04 CHL N/A N/A N/A N/A
    993049 9i4t:s (2.44) BS05 CLA N/A N/A N/A N/A
    993050 9i4t:s (2.44) BS06 CLA N/A N/A N/A N/A
    993051 9i4t:s (2.44) BS07 CLA N/A N/A N/A N/A
    993052 9i4t:s (2.44) BS08 CLA N/A N/A N/A N/A
    993053 9i4t:s (2.44) BS09 CLA N/A N/A N/A N/A
    993054 9i4t:s (2.44) BS10 CLA N/A N/A N/A N/A
    993055 9i4t:s (2.44) BS11 CHL N/A N/A N/A N/A
    993056 9i4t:s (2.44) BS12 CLA N/A N/A N/A N/A
    993057 9i4t:s (2.44) BS13 CLA N/A N/A N/A N/A
    993058 9i4t:s (2.44) BS14 CHL N/A N/A N/A N/A
    993059 9i4t:s (2.44) BS15 CHL N/A N/A N/A N/A
    993060 9i4t:w (2.44) BS01 CLA N/A N/A N/A N/A
    993061 9i4t:x (2.44) BS01 CLA N/A N/A N/A N/A
    993062 9i4t:y (2.44) BS01 CHL N/A N/A N/A N/A
    993063 9i4t:y (2.44) BS02 CHL N/A N/A N/A N/A
    993064 9i4t:y (2.44) BS03 CHL N/A N/A N/A N/A
    993065 9i4t:y (2.44) BS04 CHL N/A N/A N/A N/A
    993066 9i4t:y (2.44) BS05 CLA N/A N/A N/A N/A
    993067 9i4t:y (2.44) BS06 CHL N/A N/A N/A N/A
    993068 9i4t:y (2.44) BS07 CLA N/A N/A N/A N/A
    993069 9i4t:y (2.44) BS08 CLA N/A N/A N/A N/A
    993070 9i4t:y (2.44) BS09 CLA N/A N/A N/A N/A
    993071 9i4t:y (2.44) BS10 CHL N/A N/A N/A N/A
    993072 9i4t:y (2.44) BS11 CLA N/A N/A N/A N/A
    993073 9i4t:y (2.44) BS12 CHL N/A N/A N/A N/A
    993074 9i4t:y (2.44) BS13 CLA N/A N/A N/A N/A
    993075 9i4t:y (2.44) BS14 CLA N/A N/A N/A N/A
    993076 9i4t:y (2.44) BS15 CLA N/A N/A N/A N/A
    993077 9i4t:z (2.44) BS01 CLA N/A N/A N/A N/A
    993078 9i4u:A (2.4) BS01 HEM N/A GO:0004601 ... A0A7U9HFU5 40843530
    993079 9i4u:A (2.4) BS02 NO N/A GO:0004601 ... A0A7U9HFU5 40843530
    993080 9i4u:B (2.4) BS01 HEM N/A GO:0004601 ... A0A7U9HFU5 40843530
    993081 9i4u:B (2.4) BS02 NO N/A GO:0004601 ... A0A7U9HFU5 40843530
    993082 9i4u:C (2.4) BS01 HEM N/A GO:0004601 ... A0A7U9HFU5 40843530
    993083 9i4u:C (2.4) BS02 NO N/A GO:0004601 ... A0A7U9HFU5 40843530
    993084 9i4u:D (2.4) BS01 HEM N/A GO:0004601 ... A0A7U9HFU5 40843530
    993085 9i4u:D (2.4) BS02 NO N/A GO:0004601 ... A0A7U9HFU5 40843530
    993086 9i4u:E (2.4) BS01 HEM N/A GO:0004601 ... A0A7U9HFU5 40843530
    993087 9i4u:E (2.4) BS02 NO N/A GO:0004601 ... A0A7U9HFU5 40843530
    993088 9i4u:F (2.4) BS01 HEM N/A GO:0004601 ... A0A7U9HFU5 40843530
    993089 9i4u:F (2.4) BS02 NO N/A GO:0004601 ... A0A7U9HFU5 40843530
    993090 9i4v:A (2.33) BS01 ZN N/A GO:0004386 ... P0DTD1 40421686
    993091 9i4v:A (2.33) BS02 ZN N/A GO:0004386 ... P0DTD1 40421686
    993092 9i4v:A (2.33) BS03 ZN N/A GO:0004386 ... P0DTD1 40421686
    993093 9i4v:B (2.33) BS01 ZN N/A GO:0004386 ... P0DTD1 40421686
    993094 9i4v:B (2.33) BS02 ZN N/A GO:0004386 ... P0DTD1 40421686
    993095 9i4v:B (2.33) BS03 ZN N/A GO:0004386 ... P0DTD1 40421686
    993096 9i4w:A (2.44) BS01 FUC N/A GO:0001540 ... P06276 N/A
    993097 9i4w:A (2.44) BS02 FUC N/A GO:0001540 ... P06276 N/A
    993098 9i4w:A (2.44) BS03 A1I0D N/A GO:0001540 ... P06276 N/A
    993099 9i4w:A (2.44) BS04 A1I0F N/A GO:0001540 ... P06276 N/A
    993100 9i4x:A (2.79) BS01 AOQ N/A GO:0005743 ... O20672 40389671
    993101 9i4x:A (2.79) BS02 A1IJD N/A GO:0005743 ... O20672 40389671
    993102 9i4x:A (2.79) BS03 HEM N/A GO:0005743 ... O20672 40389671
    993103 9i4x:A (2.79) BS04 HEM N/A GO:0005743 ... O20672 40389671
    993104 9i4x:B (2.79) BS01 HEC N/A GO:0005743 ... S7W9J5 40389671
    993105 9i4x:C (2.79) BS01 FES N/A GO:0008121 ... S7UK06 40389671
    993106 9i4x:D (2.79) BS01 ZN N/A GO:0004222 ... S7W617 40389671
    993107 9i4x:a (2.79) BS01 AOQ N/A GO:0005743 ... O20672 40389671
    993108 9i4x:a (2.79) BS02 A1IJD N/A GO:0005743 ... O20672 40389671
    993109 9i4x:a (2.79) BS03 HEM N/A GO:0005743 ... O20672 40389671
    993110 9i4x:a (2.79) BS04 HEM N/A GO:0005743 ... O20672 40389671
    993111 9i4x:b (2.79) BS01 HEC N/A GO:0005743 ... S7W9J5 40389671
    993112 9i4x:c (2.79) BS01 FES N/A GO:0008121 ... S7UK06 40389671
    993113 9i4x:d (2.79) BS01 ZN N/A GO:0004222 ... S7W617 40389671
    993114 9i4z:A (1.75) BS01 ZN N/A GO:0008237 ... Q9AES2 40627637
    993115 9i4z:A (1.75) BS02 ZN N/A GO:0008237 ... Q9AES2 40627637
    993116 9i51:A (1.82) BS01 ZN N/A GO:0004386 ... P0DTD1 40638074
    993117 9i51:A (1.82) BS02 ZN N/A GO:0004386 ... P0DTD1 40638074
    993118 9i51:A (1.82) BS03 ZN N/A GO:0004386 ... P0DTD1 40638074
    993119 9i51:A (1.82) BS04 ADP N/A GO:0004386 ... P0DTD1 40638074
    993120 9i51:A (1.82) BS05 PO4 N/A GO:0004386 ... P0DTD1 40638074
    993121 9i51:A (1.82) BS06 ADP N/A GO:0004386 ... P0DTD1 40638074
    993122 9i51:B (1.82) BS01 ADP N/A GO:0004386 ... P0DTD1 40638074
    993123 9i51:B (1.82) BS02 ZN N/A GO:0004386 ... P0DTD1 40638074
    993124 9i51:B (1.82) BS03 ZN N/A GO:0004386 ... P0DTD1 40638074
    993125 9i51:B (1.82) BS04 ZN N/A GO:0004386 ... P0DTD1 40638074
    993126 9i51:B (1.82) BS05 ADP N/A GO:0004386 ... P0DTD1 40638074
    993127 9i51:B (1.82) BS06 PO4 N/A GO:0004386 ... P0DTD1 40638074
    993128 9i51:B (1.82) BS07 PO4 N/A GO:0004386 ... P0DTD1 40638074
    993129 9i52:R (2.8) BS01 A1IZU N/A GO:0001588 ... P07550
    P21728
    40552668
    993130 9i53:A (1.92) BS01 ZN N/A GO:0004386 ... P0DTD1 40638074
    993131 9i53:A (1.92) BS02 ZN N/A GO:0004386 ... P0DTD1 40638074
    993132 9i53:A (1.92) BS03 ZN N/A GO:0004386 ... P0DTD1 40638074
    993133 9i53:A (1.92) BS04 ATP N/A GO:0004386 ... P0DTD1 40638074
    993134 9i53:A (1.92) BS05 PO4 N/A GO:0004386 ... P0DTD1 40638074
    993135 9i53:A (1.92) BS06 ATP N/A GO:0004386 ... P0DTD1 40638074
    993136 9i53:B (1.92) BS01 ATP N/A GO:0004386 ... P0DTD1 40638074
    993137 9i53:B (1.92) BS02 ZN N/A GO:0004386 ... P0DTD1 40638074
    993138 9i53:B (1.92) BS03 ZN N/A GO:0004386 ... P0DTD1 40638074
    993139 9i53:B (1.92) BS04 ZN N/A GO:0004386 ... P0DTD1 40638074
    993140 9i53:B (1.92) BS05 ATP N/A GO:0004386 ... P0DTD1 40638074
    993141 9i53:B (1.92) BS06 PO4 N/A GO:0004386 ... P0DTD1 40638074
    993142 9i53:B (1.92) BS07 PO4 N/A GO:0004386 ... P0DTD1 40638074
    993143 9i54:R (2.72) BS01 A1IZV N/A GO:0001588 ... P07550
    P21728
    40552668
    993144 9i55:A (2.75) BS01 MG N/A GO:0004615 ... Q9Z2M7 N/A
    993145 9i55:A (2.75) BS02 MG N/A GO:0004615 ... Q9Z2M7 N/A
    993146 9i55:A (2.75) BS03 MG N/A GO:0004615 ... Q9Z2M7 N/A
    993147 9i55:B (2.75) BS01 MG N/A GO:0004615 ... Q9Z2M7 N/A
    993148 9i55:B (2.75) BS02 G16 N/A GO:0004615 ... Q9Z2M7 N/A
    993149 9i55:B (2.75) BS03 MG N/A GO:0004615 ... Q9Z2M7 N/A
    993150 9i55:C (2.75) BS01 G16 N/A GO:0004615 ... Q9Z2M7 N/A
    993151 9i55:C (2.75) BS02 MG N/A GO:0004615 ... Q9Z2M7 N/A
    993152 9i55:C (2.75) BS03 MG N/A GO:0004615 ... Q9Z2M7 N/A
    993153 9i55:D (2.75) BS01 G16 N/A GO:0004615 ... Q9Z2M7 N/A
    993154 9i55:D (2.75) BS02 MG N/A GO:0004615 ... Q9Z2M7 N/A
    993155 9i55:D (2.75) BS03 MG N/A GO:0004615 ... Q9Z2M7 N/A
    993156 9i55:D (2.75) BS04 MG N/A GO:0004615 ... Q9Z2M7 N/A
    993157 9i55:E (2.75) BS01 MG N/A GO:0004615 ... Q9Z2M7 N/A
    993158 9i55:E (2.75) BS02 MG N/A GO:0004615 ... Q9Z2M7 N/A
    993159 9i55:F (2.75) BS01 G16 N/A GO:0004615 ... Q9Z2M7 N/A
    993160 9i55:F (2.75) BS02 MG N/A GO:0004615 ... Q9Z2M7 N/A
    993161 9i55:F (2.75) BS03 MG N/A GO:0004615 ... Q9Z2M7 N/A
    993162 9i56:A (1.49) BS01 A1IZY N/A GO:0004622 ... Q99685 41290653
    993163 9i57:A (1.217) BS01 A1IZW N/A GO:0009159 ... O43598 41194588
    993164 9i57:A (1.217) BS02 A1IZW N/A GO:0009159 ... O43598 41194588
    993165 9i57:B (1.217) BS01 A1IZW N/A GO:0009159 ... O43598 41194588
    993166 9i57:B (1.217) BS02 A1IZW N/A GO:0009159 ... O43598 41194588
    993167 9i58:A (1.213) BS01 A1IZX N/A GO:0009159 ... O43598 41194588
    993168 9i58:B (1.213) BS01 A1IZX N/A GO:0009159 ... O43598 41194588
    993169 9i5e:A (3.77) BS01 M1X N/A GO:0003924 ... P01116 N/A
    993170 9i5e:A (3.77) BS02 GDP N/A GO:0003924 ... P01116 N/A
    993171 9i5e:A (3.77) BS03 MG N/A GO:0003924 ... P01116 N/A
    993172 9i5e:B (3.77) BS01 GDP N/A GO:0003924 ... P01116 N/A
    993173 9i5e:B (3.77) BS02 MG N/A GO:0003924 ... P01116 N/A
    993174 9i5e:B (3.77) BS03 M1X N/A GO:0003924 ... P01116 N/A
    993175 9i5f:A (1.162) BS01 NAD N/A GO:0004365 ... O25902 N/A
    993176 9i5f:A (1.162) BS02 ART N/A GO:0004365 ... O25902 N/A
    993177 9i5i:A (2.65) BS01 dna N/A GO:0003911 ... A0A1S6KUY4 N/A
    993178 9i5i:A (2.65) BS02 dna N/A GO:0003911 ... A0A1S6KUY4 N/A
    993179 9i5i:A (2.65) BS03 NMN N/A GO:0003911 ... A0A1S6KUY4 N/A
    993180 9i5i:A (2.65) BS04 AMP N/A GO:0003911 ... A0A1S6KUY4 N/A
    993181 9i5i:B (2.65) BS01 dna N/A GO:0016874 ... A0A1S6KUZ6 N/A
    993182 9i5i:B (2.65) BS02 dna N/A GO:0016874 ... A0A1S6KUZ6 N/A
    993183 9i5i:B (2.65) BS03 ZN N/A GO:0016874 ... A0A1S6KUZ6 N/A
    993184 9i5i:E (2.65) BS01 dna N/A GO:0003911 ... A0A1S6KUY4 N/A
    993185 9i5i:E (2.65) BS02 dna N/A GO:0003911 ... A0A1S6KUY4 N/A
    993186 9i5i:E (2.65) BS03 NMN N/A GO:0003911 ... A0A1S6KUY4 N/A
    993187 9i5i:E (2.65) BS04 AMP N/A GO:0003911 ... A0A1S6KUY4 N/A
    993188 9i5i:F (2.65) BS01 dna N/A GO:0016874 ... A0A1S6KUZ6 N/A
    993189 9i5i:F (2.65) BS02 dna N/A GO:0016874 ... A0A1S6KUZ6 N/A
    993190 9i5i:F (2.65) BS03 ZN N/A GO:0016874 ... A0A1S6KUZ6 N/A
    993191 9i5j:A (1.48) BS01 A1IZ4 N/A GO:0004622 ... Q99685 41290653
    993192 9i5k:A (3.2) BS01 A1I0N N/A GO:0000030 ... G0SET1 41392315
    993193 9i5k:A (3.2) BS02 A1I0M N/A GO:0000030 ... G0SET1 41392315
    993194 9i5k:B (3.2) BS01 A1I0N N/A GO:0000030 ... G0SET1 41392315
    993195 9i5k:B (3.2) BS02 A1I0M N/A GO:0000030 ... G0SET1 41392315
    993196 9i5l:A (3.4) BS01 A1I0N N/A GO:0000030 ... G0SET1 41392315
    993197 9i5l:A (3.4) BS02 A1I0M N/A GO:0000030 ... G0SET1 41392315
    993198 9i5l:B (3.4) BS01 A1I0N N/A GO:0000030 ... G0SET1 41392315
    993199 9i5l:B (3.4) BS02 A1I0M N/A GO:0000030 ... G0SET1 41392315
    993200 9i5n:A (3.4) BS01 MG N/A N/A N/A 41742604

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).