SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    993201 9i5o:A (2.66) BS01 FUC N/A GO:0001540 ... P06276 40779804
    993202 9i5o:A (2.66) BS02 A1A2L N/A GO:0001540 ... P06276 40779804
    993203 9i5p:A (2.75) BS01 A1A2O N/A GO:0001540 ... P06276 40779804
    993204 9i5p:A (2.75) BS02 SIA N/A GO:0001540 ... P06276 40779804
    993205 9i5q:A (2.36) BS01 FUC N/A GO:0001540 ... P06276 40779804
    993206 9i5q:A (2.36) BS02 FUC N/A GO:0001540 ... P06276 40779804
    993207 9i5q:A (2.36) BS03 A1IZ3 N/A GO:0001540 ... P06276 40779804
    993208 9i5r:A (2.62) BS01 peptide N/A GO:0005777 ... Q01497 40847603
    993209 9i5t:0 (2.6) BS01 rna N/A GO:0003735 ... Q7MTJ4 40444637
    993210 9i5t:1 (2.6) BS01 rna N/A GO:0003735 ... Q7MTM1 40444637
    993211 9i5t:11 (2.6) BS01 rna N/A GO:0000049 ... Q7MTM5 40444637
    993212 9i5t:11 (2.6) BS02 rna N/A GO:0000049 ... Q7MTM5 40444637
    993213 9i5t:12 (2.6) BS01 rna N/A GO:0003735 ... Q7MWL6 40444637
    993214 9i5t:13 (2.6) BS01 rna N/A GO:0002181 ... Q7MTM8 40444637
    993215 9i5t:15 (2.6) BS01 rna N/A N/A A0A0E2LR73 40444637
    993216 9i5t:2 (2.6) BS01 rna N/A GO:0003735 ... Q7MTN1 40444637
    993217 9i5t:4 (2.6) BS01 rna N/A GO:0003735 ... Q7MT50 40444637
    993218 9i5t:5 (2.6) BS01 rna N/A GO:0003735 ... Q7MTJ5 40444637
    993219 9i5t:6 (2.6) BS01 rna N/A GO:0003735 ... Q7MWG1 40444637
    993220 9i5t:7 (2.6) BS01 rna N/A GO:0003735 ... Q7MVQ7 40444637
    993221 9i5t:8 (2.6) BS01 rna N/A GO:0003735 ... Q7MTN6 40444637
    993222 9i5t:D (2.6) BS01 rna N/A GO:0002181 ... Q7MTL6 40444637
    993223 9i5t:E (2.6) BS01 rna N/A GO:0003735 ... Q7MTL3 40444637
    993224 9i5t:F (2.6) BS01 rna N/A GO:0003735 ... Q7MTL4 40444637
    993225 9i5t:M (2.6) BS01 rna N/A GO:0003729 ... Q7MX43 40444637
    993226 9i5t:N (2.6) BS01 rna N/A GO:0003735 ... Q7MTM3 40444637
    993227 9i5t:O (2.6) BS01 rna N/A GO:0003735 ... Q7MTN2 40444637
    993228 9i5t:P (2.6) BS01 rna N/A GO:0003735 ... Q7MTM0 40444637
    993229 9i5t:Q (2.6) BS01 rna N/A GO:0003735 ... Q7MTP1 40444637
    993230 9i5t:R (2.6) BS01 rna N/A GO:0003735 ... Q7MTM9 40444637
    993231 9i5t:R (2.6) BS02 rna N/A GO:0003735 ... Q7MTM9 40444637
    993232 9i5t:S (2.6) BS01 rna N/A GO:0003735 ... Q7MXW3 40444637
    993233 9i5t:T (2.6) BS01 rna N/A GO:0000027 ... Q7MVQ8 40444637
    993234 9i5t:U (2.6) BS01 rna N/A GO:0003723 ... Q7MX95 40444637
    993235 9i5t:V (2.6) BS01 rna N/A GO:0003735 ... Q7MTL8 40444637
    993236 9i5t:W (2.6) BS01 rna N/A GO:0003735 ... Q7MTL5 40444637
    993237 9i5t:X (2.6) BS01 rna N/A GO:0003723 ... Q7MTM4 40444637
    993238 9i5t:Y (2.6) BS01 rna N/A GO:0003723 ... Q7MXK8 40444637
    993239 9i5t:Z (2.6) BS01 rna N/A GO:0003735 ... Q7MX94 40444637
    993240 9i5t:Z (2.6) BS02 rna N/A GO:0003735 ... Q7MX94 40444637
    993241 9i5t:h (2.6) BS01 rna N/A GO:0003735 ... Q7MWL1 40444637
    993242 9i5v:0 (2.7) BS01 rna N/A GO:0003735 ... Q7MTJ4 40444637
    993243 9i5v:1 (2.7) BS01 rna N/A GO:0003735 ... Q7MTM1 40444637
    993244 9i5v:11 (2.7) BS01 rna N/A GO:0000049 ... Q7MTM5 40444637
    993245 9i5v:11 (2.7) BS02 rna N/A GO:0000049 ... Q7MTM5 40444637
    993246 9i5v:12 (2.7) BS01 rna N/A GO:0003735 ... Q7MWL6 40444637
    993247 9i5v:13 (2.7) BS01 rna N/A GO:0002181 ... Q7MTM8 40444637
    993248 9i5v:14 (2.7) BS01 rna N/A GO:0003677 ... Q7MX33 40444637
    993249 9i5v:15 (2.7) BS01 rna N/A N/A A0A0E2LR73 40444637
    993250 9i5v:2 (2.7) BS01 rna N/A GO:0003735 ... Q7MTN1 40444637
    993251 9i5v:2 (2.7) BS02 rna N/A GO:0003735 ... Q7MTN1 40444637
    993252 9i5v:4 (2.7) BS01 rna N/A GO:0003735 ... Q7MT50 40444637
    993253 9i5v:5 (2.7) BS01 rna N/A GO:0003735 ... Q7MTJ5 40444637
    993254 9i5v:6 (2.7) BS01 rna N/A GO:0003735 ... Q7MWG1 40444637
    993255 9i5v:7 (2.7) BS01 rna N/A GO:0003735 ... Q7MVQ7 40444637
    993256 9i5v:8 (2.7) BS01 rna N/A GO:0003735 ... Q7MTN6 40444637
    993257 9i5v:9 (2.7) BS01 rna N/A GO:0003735 ... Q7MX34 40444637
    993258 9i5v:D (2.7) BS01 rna N/A GO:0002181 ... Q7MTL6 40444637
    993259 9i5v:E (2.7) BS01 rna N/A GO:0003735 ... Q7MTL3 40444637
    993260 9i5v:F (2.7) BS01 rna N/A GO:0003735 ... Q7MTL4 40444637
    993261 9i5v:I (2.7) BS01 rna N/A GO:0003735 ... Q7MWL2 40444637
    993262 9i5v:J (2.7) BS01 rna N/A GO:0003723 ... Q7MX42 40444637
    993263 9i5v:K (2.7) BS01 rna N/A GO:0000049 ... Q7MTL2 40444637
    993264 9i5v:L (2.7) BS01 rna N/A GO:0003735 ... Q7MTN8 40444637
    993265 9i5v:M (2.7) BS01 rna N/A GO:0003729 ... Q7MX43 40444637
    993266 9i5v:N (2.7) BS01 rna N/A GO:0003735 ... Q7MTM3 40444637
    993267 9i5v:O (2.7) BS01 rna N/A GO:0003735 ... Q7MTN2 40444637
    993268 9i5v:P (2.7) BS01 rna N/A GO:0003735 ... Q7MTM0 40444637
    993269 9i5v:Q (2.7) BS01 rna N/A GO:0003735 ... Q7MTP1 40444637
    993270 9i5v:R (2.7) BS01 rna N/A GO:0003735 ... Q7MTM9 40444637
    993271 9i5v:R (2.7) BS02 rna N/A GO:0003735 ... Q7MTM9 40444637
    993272 9i5v:S (2.7) BS01 rna N/A GO:0003735 ... Q7MXW3 40444637
    993273 9i5v:T (2.7) BS01 rna N/A GO:0000027 ... Q7MVQ8 40444637
    993274 9i5v:U (2.7) BS01 rna N/A GO:0003723 ... Q7MX95 40444637
    993275 9i5v:V (2.7) BS01 rna N/A GO:0003735 ... Q7MTL8 40444637
    993276 9i5v:W (2.7) BS01 rna N/A GO:0003735 ... Q7MTL5 40444637
    993277 9i5v:X (2.7) BS01 rna N/A GO:0003723 ... Q7MTM4 40444637
    993278 9i5v:Y (2.7) BS01 rna N/A GO:0003723 ... Q7MXK8 40444637
    993279 9i5v:Z (2.7) BS01 rna N/A GO:0003735 ... Q7MX94 40444637
    993280 9i5v:Z (2.7) BS02 rna N/A GO:0003735 ... Q7MX94 40444637
    993281 9i5v:b (2.7) BS01 rna N/A GO:0003735 ... Q7MWL3 40444637
    993282 9i5v:c (2.7) BS01 rna N/A GO:0003735 ... Q7MT66 40444637
    993283 9i5v:d (2.7) BS01 rna N/A GO:0003723 ... Q7MU43 40444637
    993284 9i5v:e (2.7) BS01 rna N/A GO:0003735 ... Q7MTM2 40444637
    993285 9i5v:f (2.7) BS01 rna N/A GO:0003735 ... Q7MU16 40444637
    993286 9i5v:f (2.7) BS02 rna N/A GO:0003735 ... Q7MU16 40444637
    993287 9i5v:g (2.7) BS01 rna N/A GO:0003735 ... Q7MTM6 40444637
    993288 9i5v:h (2.7) BS01 rna N/A GO:0003735 ... Q7MWL1 40444637
    993289 9i5v:i (2.7) BS01 rna N/A GO:0000049 ... Q7MTN7 40444637
    993290 9i5v:j (2.7) BS01 rna N/A GO:0000049 ... Q7MTK9 40444637
    993291 9i5v:k (2.7) BS01 rna N/A GO:0003676 ... Q7MTL9 40444637
    993292 9i5v:l (2.7) BS01 rna N/A GO:0003723 ... Q7MTN9 40444637
    993293 9i5v:m (2.7) BS01 rna N/A GO:0000049 ... Q7MTL0 40444637
    993294 9i5v:n (2.7) BS01 rna N/A GO:0003723 ... Q7MTN0 40444637
    993295 9i5v:o (2.7) BS01 rna N/A GO:0003735 ... Q7MTM7 40444637
    993296 9i5v:p (2.7) BS01 rna N/A GO:0000028 ... Q7MTL7 40444637
    993297 9i5x:0 (3.0) BS01 rna N/A GO:0003735 ... Q7MTJ4 40444637
    993298 9i5x:1 (3.0) BS01 rna N/A GO:0003735 ... Q7MTM1 40444637
    993299 9i5x:2 (3.0) BS01 rna N/A GO:0003735 ... Q7MTN1 40444637
    993300 9i5x:2 (3.0) BS02 rna N/A GO:0003735 ... Q7MTN1 40444637
    993301 9i5x:4 (3.0) BS01 rna N/A GO:0003735 ... Q7MT50 40444637
    993302 9i5x:5 (3.0) BS01 rna N/A GO:0003735 ... Q7MTJ5 40444637
    993303 9i5x:6 (3.0) BS01 rna N/A GO:0003735 ... Q7MWG1 40444637
    993304 9i5x:7 (3.0) BS01 rna N/A GO:0003735 ... Q7MVQ7 40444637
    993305 9i5x:8 (3.0) BS01 rna N/A GO:0003735 ... Q7MTN6 40444637
    993306 9i5x:D (3.0) BS01 rna N/A GO:0002181 ... Q7MTL6 40444637
    993307 9i5x:D (3.0) BS02 rna N/A GO:0002181 ... Q7MTL6 40444637
    993308 9i5x:E (3.0) BS01 rna N/A GO:0003735 ... Q7MTL3 40444637
    993309 9i5x:F (3.0) BS01 rna N/A GO:0003735 ... Q7MTL4 40444637
    993310 9i5x:I (3.0) BS01 rna N/A GO:0003735 ... Q7MWL2 40444637
    993311 9i5x:J (3.0) BS01 rna N/A GO:0003723 ... Q7MX42 40444637
    993312 9i5x:K (3.0) BS01 rna N/A GO:0000049 ... Q7MTL2 40444637
    993313 9i5x:L (3.0) BS01 rna N/A GO:0003735 ... Q7MTN8 40444637
    993314 9i5x:M (3.0) BS01 rna N/A GO:0003729 ... Q7MX43 40444637
    993315 9i5x:N (3.0) BS01 rna N/A GO:0003735 ... Q7MTM3 40444637
    993316 9i5x:O (3.0) BS01 rna N/A GO:0003735 ... Q7MTN2 40444637
    993317 9i5x:P (3.0) BS01 rna N/A GO:0003735 ... Q7MTM0 40444637
    993318 9i5x:Q (3.0) BS01 rna N/A GO:0003735 ... Q7MTP1 40444637
    993319 9i5x:R (3.0) BS01 rna N/A GO:0003735 ... Q7MTM9 40444637
    993320 9i5x:R (3.0) BS02 rna N/A GO:0003735 ... Q7MTM9 40444637
    993321 9i5x:S (3.0) BS01 rna N/A GO:0003735 ... Q7MXW3 40444637
    993322 9i5x:T (3.0) BS01 rna N/A GO:0000027 ... Q7MVQ8 40444637
    993323 9i5x:U (3.0) BS01 rna N/A GO:0003723 ... Q7MX95 40444637
    993324 9i5x:V (3.0) BS01 rna N/A GO:0003735 ... Q7MTL8 40444637
    993325 9i5x:W (3.0) BS01 rna N/A GO:0003735 ... Q7MTL5 40444637
    993326 9i5x:X (3.0) BS01 rna N/A GO:0003723 ... Q7MTM4 40444637
    993327 9i5x:Y (3.0) BS01 rna N/A GO:0003723 ... Q7MXK8 40444637
    993328 9i5x:Z (3.0) BS01 rna N/A GO:0003735 ... Q7MX94 40444637
    993329 9i5x:Z (3.0) BS02 rna N/A GO:0003735 ... Q7MX94 40444637
    993330 9i5x:b (3.0) BS01 rna N/A GO:0003735 ... Q7MWL3 40444637
    993331 9i5x:c (3.0) BS01 rna N/A GO:0003735 ... Q7MT66 40444637
    993332 9i5x:d (3.0) BS01 rna N/A GO:0003723 ... Q7MU43 40444637
    993333 9i5x:e (3.0) BS01 rna N/A GO:0003735 ... Q7MTM2 40444637
    993334 9i5x:f (3.0) BS01 rna N/A GO:0003735 ... Q7MU16 40444637
    993335 9i5x:f (3.0) BS02 rna N/A GO:0003735 ... Q7MU16 40444637
    993336 9i5x:g (3.0) BS01 rna N/A GO:0003735 ... Q7MTM6 40444637
    993337 9i5x:h (3.0) BS01 rna N/A GO:0003735 ... Q7MWL1 40444637
    993338 9i5x:i (3.0) BS01 rna N/A GO:0000049 ... Q7MTN7 40444637
    993339 9i5x:j (3.0) BS01 rna N/A GO:0000049 ... Q7MTK9 40444637
    993340 9i5x:k (3.0) BS01 rna N/A GO:0003676 ... Q7MTL9 40444637
    993341 9i5x:l (3.0) BS01 rna N/A GO:0003723 ... Q7MTN9 40444637
    993342 9i5x:m (3.0) BS01 rna N/A GO:0000049 ... Q7MTL0 40444637
    993343 9i5x:n (3.0) BS01 rna N/A GO:0003723 ... Q7MTN0 40444637
    993344 9i5x:o (3.0) BS01 rna N/A GO:0003735 ... Q7MTM7 40444637
    993345 9i5x:p (3.0) BS01 rna N/A GO:0000028 ... Q7MTL7 40444637
    993346 9i5y:A (1.5) BS01 ADP N/A N/A P11021 N/A
    993347 9i62:A (2.64) BS01 dna N/A GO:0000150 ... Q06609 40820711
    993348 9i62:A (2.64) BS02 CA N/A GO:0000150 ... Q06609 40820711
    993349 9i62:A (2.64) BS03 ATP N/A GO:0000150 ... Q06609 40820711
    993350 9i62:A (2.64) BS04 CA N/A GO:0000150 ... Q06609 40820711
    993351 9i62:A (2.64) BS05 ATP N/A GO:0000150 ... Q06609 40820711
    993352 9i62:B (2.64) BS01 dna N/A GO:0000150 ... Q06609 40820711
    993353 9i62:B (2.64) BS02 CA N/A GO:0000150 ... Q06609 40820711
    993354 9i62:B (2.64) BS03 ATP N/A GO:0000150 ... Q06609 40820711
    993355 9i62:B (2.64) BS04 CA N/A GO:0000150 ... Q06609 40820711
    993356 9i62:B (2.64) BS05 ATP N/A GO:0000150 ... Q06609 40820711
    993357 9i62:C (2.64) BS01 dna N/A GO:0000150 ... Q06609 40820711
    993358 9i62:C (2.64) BS02 CA N/A GO:0000150 ... Q06609 40820711
    993359 9i62:C (2.64) BS03 ATP N/A GO:0000150 ... Q06609 40820711
    993360 9i62:C (2.64) BS04 CA N/A GO:0000150 ... Q06609 40820711
    993361 9i62:C (2.64) BS05 ATP N/A GO:0000150 ... Q06609 40820711
    993362 9i62:D (2.64) BS01 dna N/A GO:0000150 ... Q06609 40820711
    993363 9i62:D (2.64) BS02 dna N/A GO:0000150 ... Q06609 40820711
    993364 9i62:D (2.64) BS03 dna N/A GO:0000150 ... Q06609 40820711
    993365 9i62:D (2.64) BS04 CA N/A GO:0000150 ... Q06609 40820711
    993366 9i62:D (2.64) BS05 ATP N/A GO:0000150 ... Q06609 40820711
    993367 9i62:D (2.64) BS06 CA N/A GO:0000150 ... Q06609 40820711
    993368 9i62:D (2.64) BS07 ATP N/A GO:0000150 ... Q06609 40820711
    993369 9i62:E (2.64) BS01 dna N/A GO:0000150 ... Q06609 40820711
    993370 9i62:E (2.64) BS02 dna N/A GO:0000150 ... Q06609 40820711
    993371 9i62:E (2.64) BS03 CA N/A GO:0000150 ... Q06609 40820711
    993372 9i62:E (2.64) BS04 ATP N/A GO:0000150 ... Q06609 40820711
    993373 9i62:E (2.64) BS05 CA N/A GO:0000150 ... Q06609 40820711
    993374 9i62:E (2.64) BS06 ATP N/A GO:0000150 ... Q06609 40820711
    993375 9i62:F (2.64) BS01 dna N/A GO:0000150 ... Q06609 40820711
    993376 9i62:F (2.64) BS02 dna N/A GO:0000150 ... Q06609 40820711
    993377 9i62:F (2.64) BS03 dna N/A GO:0000150 ... Q06609 40820711
    993378 9i62:F (2.64) BS04 CA N/A GO:0000150 ... Q06609 40820711
    993379 9i62:F (2.64) BS05 ATP N/A GO:0000150 ... Q06609 40820711
    993380 9i62:F (2.64) BS06 CA N/A GO:0000150 ... Q06609 40820711
    993381 9i62:F (2.64) BS07 ATP N/A GO:0000150 ... Q06609 40820711
    993382 9i62:G (2.64) BS01 dna N/A GO:0000150 ... Q06609 40820711
    993383 9i62:G (2.64) BS02 dna N/A GO:0000150 ... Q06609 40820711
    993384 9i62:G (2.64) BS03 dna N/A GO:0000150 ... Q06609 40820711
    993385 9i62:G (2.64) BS04 CA N/A GO:0000150 ... Q06609 40820711
    993386 9i62:G (2.64) BS05 ATP N/A GO:0000150 ... Q06609 40820711
    993387 9i62:G (2.64) BS06 CA N/A GO:0000150 ... Q06609 40820711
    993388 9i62:G (2.64) BS07 ATP N/A GO:0000150 ... Q06609 40820711
    993389 9i62:H (2.64) BS01 dna N/A GO:0000150 ... Q06609 40820711
    993390 9i62:H (2.64) BS02 dna N/A GO:0000150 ... Q06609 40820711
    993391 9i62:H (2.64) BS03 dna N/A GO:0000150 ... Q06609 40820711
    993392 9i62:H (2.64) BS04 CA N/A GO:0000150 ... Q06609 40820711
    993393 9i62:H (2.64) BS05 ATP N/A GO:0000150 ... Q06609 40820711
    993394 9i62:H (2.64) BS06 CA N/A GO:0000150 ... Q06609 40820711
    993395 9i62:H (2.64) BS07 ATP N/A GO:0000150 ... Q06609 40820711
    993396 9i62:I (2.64) BS01 dna N/A GO:0000150 ... Q06609 40820711
    993397 9i62:I (2.64) BS02 CA N/A GO:0000150 ... Q06609 40820711
    993398 9i62:I (2.64) BS03 ATP N/A GO:0000150 ... Q06609 40820711
    993399 9i64:A (1.558) BS01 A1I0H N/A N/A Q99814 N/A
    993400 9i64:B (1.558) BS01 MG N/A N/A P27540 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).