SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    993601 9i7t:C (3.8) BS01 DU0 N/A GO:0005741 ... G0S6L5 40674418
    993602 9i7t:D (3.8) BS01 DU0 N/A GO:0005741 ... G0S6L5 40674418
    993603 9i7t:G (3.8) BS01 DU0 N/A N/A G0S9G0 40674418
    993604 9i7t:H (3.8) BS01 DU0 N/A N/A G0S9G0 40674418
    993605 9i7u:A (3.15) BS01 CU N/A GO:0001666 ... P00395 41519940
    993606 9i7u:A (3.15) BS02 HEA N/A GO:0001666 ... P00395 41519940
    993607 9i7u:A (3.15) BS03 HEA N/A GO:0001666 ... P00395 41519940
    993608 9i7u:B (3.15) BS01 CU N/A GO:0001666 ... P00403 41519940
    993609 9i7u:B (3.15) BS02 CU N/A GO:0001666 ... P00403 41519940
    993610 9i7u:F (3.15) BS01 ZN N/A GO:0004129 ... P10606 41519940
    993611 9i7v:A (3.84) BS01 6Z6 N/A N/A N/A N/A
    993612 9i7v:B (3.84) BS01 6Z6 N/A N/A N/A N/A
    993613 9i7v:C (3.84) BS01 6Z6 N/A N/A N/A N/A
    993614 9i7w:U (4.8) BS01 dna N/A GO:0000166 ... P11124 41512857
    993615 9i7y:A (1.85) BS01 A1I08 N/A GO:0003924 ... P01116 41174214
    993616 9i7y:B (1.85) BS01 A1I08 N/A GO:0003924 ... P01116 41174214
    993617 9i7y:C (1.85) BS01 A1I08 N/A GO:0003924 ... P01116 41174214
    993618 9i7z:A (1.85) BS01 CA N/A GO:0005737 ... Q05097 41178200
    993619 9i7z:A (1.85) BS02 A1IZM N/A GO:0005737 ... Q05097 41178200
    993620 9i7z:B (1.85) BS01 CA N/A GO:0005737 ... Q05097 41178200
    993621 9i7z:B (1.85) BS02 A1IZM N/A GO:0005737 ... Q05097 41178200
    993622 9i7z:C (1.85) BS01 CA N/A GO:0005737 ... Q05097 41178200
    993623 9i7z:C (1.85) BS02 A1IZM N/A GO:0005737 ... Q05097 41178200
    993624 9i7z:C (1.85) BS03 9YU N/A GO:0005737 ... Q05097 41178200
    993625 9i7z:D (1.85) BS01 CA N/A GO:0005737 ... Q05097 41178200
    993626 9i7z:D (1.85) BS02 A1IZM N/A GO:0005737 ... Q05097 41178200
    993627 9i80:A (1.95) BS01 CA N/A GO:0005737 ... Q05097 41178200
    993628 9i80:A (1.95) BS02 A1I1G N/A GO:0005737 ... Q05097 41178200
    993629 9i80:B (1.95) BS01 CA N/A GO:0005737 ... Q05097 41178200
    993630 9i80:B (1.95) BS02 A1I1G N/A GO:0005737 ... Q05097 41178200
    993631 9i80:C (1.95) BS01 CA N/A GO:0005737 ... Q05097 41178200
    993632 9i80:C (1.95) BS02 A1I1G N/A GO:0005737 ... Q05097 41178200
    993633 9i80:D (1.95) BS01 CA N/A GO:0005737 ... Q05097 41178200
    993634 9i80:D (1.95) BS02 A1I1G N/A GO:0005737 ... Q05097 41178200
    993635 9i80:E (1.95) BS01 CA N/A GO:0005737 ... Q05097 41178200
    993636 9i80:E (1.95) BS02 A1I1G N/A GO:0005737 ... Q05097 41178200
    993637 9i80:F (1.95) BS01 CA N/A GO:0005737 ... Q05097 41178200
    993638 9i80:F (1.95) BS02 A1I1G N/A GO:0005737 ... Q05097 41178200
    993639 9i80:G (1.95) BS01 CA N/A GO:0005737 ... Q05097 41178200
    993640 9i80:G (1.95) BS02 A1I1G N/A GO:0005737 ... Q05097 41178200
    993641 9i80:H (1.95) BS01 CA N/A GO:0005737 ... Q05097 41178200
    993642 9i80:H (1.95) BS02 A1I1G N/A GO:0005737 ... Q05097 41178200
    993643 9i81:A (2.98) BS01 6CJ N/A GO:0003723 ... P0DTD1 40035759
    993644 9i81:A (2.98) BS02 6CJ N/A GO:0003723 ... P0DTD1 40035759
    993645 9i81:A (2.98) BS03 6CJ N/A GO:0003723 ... P0DTD1 40035759
    993646 9i86:A (2.75) BS01 dna N/A GO:0000166 ... P17637 40052821
    993647 9i86:B (2.75) BS01 dna N/A GO:0000166 ... P17637 40052821
    993648 9i86:C (2.75) BS01 dna N/A GO:0000166 ... P17637 40052821
    993649 9i86:D (2.75) BS01 dna N/A GO:0000166 ... P17637 40052821
    993650 9i86:E (2.75) BS01 dna N/A GO:0000166 ... P17637 40052821
    993651 9i86:F (2.75) BS01 dna N/A GO:0000166 ... P17637 40052821
    993652 9i8g:U (22.4) BS01 ADP N/A GO:0000776 ... P60709 40074789
    993653 9i8g:a (22.4) BS01 GDP N/A GO:0000070 ... P23258 40074789
    993654 9i8g:b (22.4) BS01 GDP N/A GO:0000070 ... P23258 40074789
    993655 9i8g:c (22.4) BS01 GDP N/A GO:0000070 ... P23258 40074789
    993656 9i8g:d (22.4) BS01 GDP N/A GO:0000070 ... P23258 40074789
    993657 9i8g:e (22.4) BS01 GDP N/A GO:0000070 ... P23258 40074789
    993658 9i8g:f (22.4) BS01 GDP N/A GO:0000070 ... P23258 40074789
    993659 9i8g:g (22.4) BS01 GDP N/A GO:0000070 ... P23258 40074789
    993660 9i8g:h (22.4) BS01 GDP N/A GO:0000070 ... P23258 40074789
    993661 9i8g:i (22.4) BS01 GDP N/A GO:0000070 ... P23258 40074789
    993662 9i8g:j (22.4) BS01 GDP N/A GO:0000070 ... P23258 40074789
    993663 9i8g:k (22.4) BS01 GDP N/A GO:0000070 ... P23258 40074789
    993664 9i8g:l (22.4) BS01 GDP N/A GO:0000070 ... P23258 40074789
    993665 9i8g:m (22.4) BS01 GDP N/A GO:0000070 ... P23258 40074789
    993666 9i8g:t (22.4) BS01 GDP N/A GO:0000070 ... P23258 40074789
    993667 9i8h:U (23.2) BS01 ADP N/A GO:0000776 ... P60709 40074789
    993668 9i8h:a (23.2) BS01 GDP N/A GO:0000070 ... P23258 40074789
    993669 9i8h:b (23.2) BS01 GDP N/A GO:0000070 ... P23258 40074789
    993670 9i8h:c (23.2) BS01 GDP N/A GO:0000070 ... P23258 40074789
    993671 9i8h:d (23.2) BS01 GDP N/A GO:0000070 ... P23258 40074789
    993672 9i8h:e (23.2) BS01 GDP N/A GO:0000070 ... P23258 40074789
    993673 9i8h:f (23.2) BS01 GDP N/A GO:0000070 ... P23258 40074789
    993674 9i8h:g (23.2) BS01 GDP N/A GO:0000070 ... P23258 40074789
    993675 9i8h:h (23.2) BS01 GDP N/A GO:0000070 ... P23258 40074789
    993676 9i8h:i (23.2) BS01 GDP N/A GO:0000070 ... P23258 40074789
    993677 9i8h:j (23.2) BS01 GDP N/A GO:0000070 ... P23258 40074789
    993678 9i8h:k (23.2) BS01 GDP N/A GO:0000070 ... P23258 40074789
    993679 9i8h:l (23.2) BS01 GDP N/A GO:0000070 ... P23258 40074789
    993680 9i8h:m (23.2) BS01 GDP N/A GO:0000070 ... P23258 40074789
    993681 9i8h:t (23.2) BS01 GDP N/A GO:0000070 ... P23258 40074789
    993682 9i8l:A (1.831) BS01 A1ICR N/A GO:0003796 ... P00698 40271720
    993683 9i8l:A (1.831) BS02 A1H8D N/A GO:0003796 ... P00698 40271720
    993684 9i8o:C (2.65) BS01 A1I1A N/A N/A N/A N/A
    993685 9i8p:A (2.601) BS01 MG N/A GO:0003774 ... P12883 41034214
    993686 9i8p:A (2.601) BS02 ADP N/A GO:0003774 ... P12883 41034214
    993687 9i8v:C (3.33) BS01 peptide N/A GO:0005634 ... Q6NZS4 40220997
    993688 9i8v:D (3.33) BS01 peptide N/A N/A A0PJS3 40220997
    993689 9i8v:F (3.33) BS01 peptide N/A GO:0048598 ... Q32LR5 40220997
    993690 9i8w:A (1.9) BS01 peptide N/A N/A P35222 N/A
    993691 9i8w:A (1.9) BS02 HHT N/A N/A P35222 N/A
    993692 9i8x:A (2.0) BS01 peptide N/A N/A P35222 N/A
    993693 9i8x:A (2.0) BS02 IJX N/A N/A P35222 N/A
    993694 9i8y:A (2.89) BS01 dna N/A N/A P0DW62 40650969
    993695 9i8y:A (2.89) BS02 dna N/A N/A P0DW62 40650969
    993696 9i8y:A (2.89) BS03 rna N/A N/A P0DW62 40650969
    993697 9i8y:A (2.89) BS04 ZN N/A N/A P0DW62 40650969
    993698 9i8y:B (2.89) BS01 dna N/A N/A P0DW62 40650969
    993699 9i8y:B (2.89) BS02 rna N/A N/A P0DW62 40650969
    993700 9i8y:B (2.89) BS03 ZN N/A N/A P0DW62 40650969
    993701 9i8y:B (2.89) BS04 ZN N/A N/A P0DW62 40650969
    993702 9i91:A (2.96) BS01 dna N/A GO:0003690 ... P9WKD9 41298423
    993703 9i91:B (2.96) BS01 dna N/A GO:0003690 ... P9WKD9 41298423
    993704 9i91:D (2.96) BS01 dna N/A GO:0003690 ... P9WKD9 41298423
    993705 9i91:E (2.96) BS01 dna N/A GO:0003690 ... P9WKD9 41298423
    993706 9i91:E (2.96) BS02 dna N/A GO:0003690 ... P9WKD9 41298423
    993707 9i91:F (2.96) BS01 dna N/A GO:0003690 ... P9WKD9 41298423
    993708 9i91:F (2.96) BS02 dna N/A GO:0003690 ... P9WKD9 41298423
    993709 9i92:A (2.41) BS01 peptide N/A GO:0005515 ... Q83SQ0 41048016
    993710 9i93:A (2.86) BS01 peptide N/A GO:0005515 ... Q83SQ0 41048016
    993711 9i94:A (2.84) BS01 peptide N/A GO:0005515 ... Q83SQ0 41048016
    993712 9i95:A (2.35) BS01 peptide N/A GO:0005515 ... Q83SQ0 41048016
    993713 9i96:A (2.67) BS01 peptide N/A GO:0005515 ... Q83SQ0 41048016
    993714 9i97:A (2.48) BS01 peptide N/A GO:0005515 ... Q83SQ0 41048016
    993715 9i98:A (2.86) BS01 peptide N/A GO:0005515 ... Q83SQ0 41048016
    993716 9i9c:A (1.49) BS01 A1I1C N/A GO:0004622 ... Q99685 41290653
    993717 9i9g:A (1.7) BS01 A1I1L N/A N/A P60842 N/A
    993718 9i9h:A (2.96) BS01 SIA N/A N/A N/A N/A
    993719 9i9h:B (2.96) BS01 GAL N/A N/A N/A N/A
    993720 9i9h:B (2.96) BS02 SIA N/A N/A N/A N/A
    993721 9i9h:C (2.96) BS01 SIA N/A N/A N/A N/A
    993722 9i9h:D (2.96) BS01 SIA N/A N/A N/A N/A
    993723 9i9h:F (2.96) BS01 SIA N/A N/A N/A N/A
    993724 9i9h:L (2.96) BS01 SIA N/A N/A N/A N/A
    993725 9i9h:L (2.96) BS02 GAL N/A N/A N/A N/A
    993726 9i9i:J (3.5) BS01 ADP N/A GO:0000439 ... P50613 41100585
    993727 9i9i:K (3.5) BS01 ADP N/A GO:0004672 ... P21127 41100585
    993728 9i9j:J (3.1) BS01 ADP N/A GO:0000439 ... P50613 41100585
    993729 9i9j:J (3.1) BS02 ADP N/A GO:0000439 ... P50613 41100585
    993730 9i9j:K (3.1) BS01 ADP N/A GO:0000082 ... P24941 41100585
    993731 9i9k:J (2.4) BS01 ADP N/A GO:0000439 ... P50613 41100585
    993732 9i9k:J (2.4) BS02 MG N/A GO:0000439 ... P50613 41100585
    993733 9i9k:J (2.4) BS03 ADP N/A GO:0000439 ... P50613 41100585
    993734 9i9k:K (2.4) BS01 ADP N/A GO:0000082 ... P24941 41100585
    993735 9i9l:A (1.89) BS01 CL0 N/A GO:0000287 ... K9TWJ0 41066538
    993736 9i9l:A (1.89) BS02 F6C N/A GO:0000287 ... K9TWJ0 41066538
    993737 9i9l:A (1.89) BS03 CLA N/A GO:0000287 ... K9TWJ0 41066538
    993738 9i9l:A (1.89) BS04 CLA N/A GO:0000287 ... K9TWJ0 41066538
    993739 9i9l:A (1.89) BS05 CLA N/A GO:0000287 ... K9TWJ0 41066538
    993740 9i9l:A (1.89) BS06 CLA N/A GO:0000287 ... K9TWJ0 41066538
    993741 9i9l:A (1.89) BS07 CLA N/A GO:0000287 ... K9TWJ0 41066538
    993742 9i9l:A (1.89) BS08 CLA N/A GO:0000287 ... K9TWJ0 41066538
    993743 9i9l:A (1.89) BS09 CLA N/A GO:0000287 ... K9TWJ0 41066538
    993744 9i9l:A (1.89) BS10 CLA N/A GO:0000287 ... K9TWJ0 41066538
    993745 9i9l:A (1.89) BS11 CLA N/A GO:0000287 ... K9TWJ0 41066538
    993746 9i9l:A (1.89) BS12 CLA N/A GO:0000287 ... K9TWJ0 41066538
    993747 9i9l:A (1.89) BS13 CLA N/A GO:0000287 ... K9TWJ0 41066538
    993748 9i9l:A (1.89) BS14 CLA N/A GO:0000287 ... K9TWJ0 41066538
    993749 9i9l:A (1.89) BS15 CLA N/A GO:0000287 ... K9TWJ0 41066538
    993750 9i9l:A (1.89) BS16 CLA N/A GO:0000287 ... K9TWJ0 41066538
    993751 9i9l:A (1.89) BS17 CLA N/A GO:0000287 ... K9TWJ0 41066538
    993752 9i9l:A (1.89) BS18 CLA N/A GO:0000287 ... K9TWJ0 41066538
    993753 9i9l:A (1.89) BS19 CLA N/A GO:0000287 ... K9TWJ0 41066538
    993754 9i9l:A (1.89) BS20 CLA N/A GO:0000287 ... K9TWJ0 41066538
    993755 9i9l:A (1.89) BS21 CLA N/A GO:0000287 ... K9TWJ0 41066538
    993756 9i9l:A (1.89) BS22 CLA N/A GO:0000287 ... K9TWJ0 41066538
    993757 9i9l:A (1.89) BS23 CLA N/A GO:0000287 ... K9TWJ0 41066538
    993758 9i9l:A (1.89) BS24 F6C N/A GO:0000287 ... K9TWJ0 41066538
    993759 9i9l:A (1.89) BS25 CLA N/A GO:0000287 ... K9TWJ0 41066538
    993760 9i9l:A (1.89) BS26 F6C N/A GO:0000287 ... K9TWJ0 41066538
    993761 9i9l:A (1.89) BS27 CLA N/A GO:0000287 ... K9TWJ0 41066538
    993762 9i9l:A (1.89) BS28 CLA N/A GO:0000287 ... K9TWJ0 41066538
    993763 9i9l:A (1.89) BS29 CLA N/A GO:0000287 ... K9TWJ0 41066538
    993764 9i9l:A (1.89) BS30 CLA N/A GO:0000287 ... K9TWJ0 41066538
    993765 9i9l:A (1.89) BS31 CLA N/A GO:0000287 ... K9TWJ0 41066538
    993766 9i9l:A (1.89) BS32 CLA N/A GO:0000287 ... K9TWJ0 41066538
    993767 9i9l:A (1.89) BS33 CLA N/A GO:0000287 ... K9TWJ0 41066538
    993768 9i9l:A (1.89) BS34 CLA N/A GO:0000287 ... K9TWJ0 41066538
    993769 9i9l:A (1.89) BS35 CLA N/A GO:0000287 ... K9TWJ0 41066538
    993770 9i9l:A (1.89) BS36 CLA N/A GO:0000287 ... K9TWJ0 41066538
    993771 9i9l:A (1.89) BS37 CLA N/A GO:0000287 ... K9TWJ0 41066538
    993772 9i9l:A (1.89) BS38 CLA N/A GO:0000287 ... K9TWJ0 41066538
    993773 9i9l:A (1.89) BS39 CLA N/A GO:0000287 ... K9TWJ0 41066538
    993774 9i9l:A (1.89) BS40 CLA N/A GO:0000287 ... K9TWJ0 41066538
    993775 9i9l:A (1.89) BS41 CLA N/A GO:0000287 ... K9TWJ0 41066538
    993776 9i9l:A (1.89) BS42 CLA N/A GO:0000287 ... K9TWJ0 41066538
    993777 9i9l:A (1.89) BS43 PQN N/A GO:0000287 ... K9TWJ0 41066538
    993778 9i9l:A (1.89) BS44 SF4 N/A GO:0000287 ... K9TWJ0 41066538
    993779 9i9l:A (1.89) BS45 F6C N/A GO:0000287 ... K9TWJ0 41066538
    993780 9i9l:A (1.89) BS46 CLA N/A GO:0000287 ... K9TWJ0 41066538
    993781 9i9l:A (1.89) BS47 CLA N/A GO:0000287 ... K9TWJ0 41066538
    993782 9i9l:A (1.89) BS48 CLA N/A GO:0000287 ... K9TWJ0 41066538
    993783 9i9l:A (1.89) BS49 CLA N/A GO:0000287 ... K9TWJ0 41066538
    993784 9i9l:A (1.89) BS50 CLA N/A GO:0000287 ... K9TWJ0 41066538
    993785 9i9l:A (1.89) BS51 CLA N/A GO:0000287 ... K9TWJ0 41066538
    993786 9i9l:B (1.89) BS01 peptide N/A GO:0000287 ... K9TVF3 41066538
    993787 9i9l:B (1.89) BS02 CL0 N/A GO:0000287 ... K9TVF3 41066538
    993788 9i9l:B (1.89) BS03 F6C N/A GO:0000287 ... K9TVF3 41066538
    993789 9i9l:B (1.89) BS04 CLA N/A GO:0000287 ... K9TVF3 41066538
    993790 9i9l:B (1.89) BS05 CLA N/A GO:0000287 ... K9TVF3 41066538
    993791 9i9l:B (1.89) BS06 CLA N/A GO:0000287 ... K9TVF3 41066538
    993792 9i9l:B (1.89) BS07 CLA N/A GO:0000287 ... K9TVF3 41066538
    993793 9i9l:B (1.89) BS08 SF4 N/A GO:0000287 ... K9TVF3 41066538
    993794 9i9l:B (1.89) BS09 F6C N/A GO:0000287 ... K9TVF3 41066538
    993795 9i9l:B (1.89) BS10 CLA N/A GO:0000287 ... K9TVF3 41066538
    993796 9i9l:B (1.89) BS11 CLA N/A GO:0000287 ... K9TVF3 41066538
    993797 9i9l:B (1.89) BS12 CLA N/A GO:0000287 ... K9TVF3 41066538
    993798 9i9l:B (1.89) BS13 CLA N/A GO:0000287 ... K9TVF3 41066538
    993799 9i9l:B (1.89) BS14 CLA N/A GO:0000287 ... K9TVF3 41066538
    993800 9i9l:B (1.89) BS15 CLA N/A GO:0000287 ... K9TVF3 41066538

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).