SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 4962 4963 4964 4965 4966 4967 4968 4969 4970 4971 4972 4973 4974 4975 4976 4977 4978 4979 4980 4981 4982 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    994201 9iaj:I (3.29) BS01 rna N/A GO:0016755 ... K0F6G5 N/A
    994202 9iaj:J (3.29) BS01 rna N/A GO:0016755 ... K0F6G5 N/A
    994203 9iaj:K (3.29) BS01 rna N/A GO:0016755 ... K0F6G5 N/A
    994204 9iak:A (3.52) BS01 rna N/A GO:0016755 ... K0F6G5 N/A
    994205 9iak:B (3.52) BS01 rna N/A GO:0016755 ... K0F6G5 N/A
    994206 9iak:C (3.52) BS01 rna N/A GO:0016755 ... K0F6G5 N/A
    994207 9iak:C (3.52) BS02 rna N/A GO:0016755 ... K0F6G5 N/A
    994208 9iak:F (3.52) BS01 rna N/A GO:0016755 ... K0F6G5 N/A
    994209 9iak:H (3.52) BS01 rna N/A GO:0016755 ... K0F6G5 N/A
    994210 9iak:H (3.52) BS02 rna N/A GO:0016755 ... K0F6G5 N/A
    994211 9iak:L (3.52) BS01 rna N/A GO:0016755 ... K0F6G5 N/A
    994212 9ial:C (3.43) BS01 rna N/A GO:0016755 ... K0F6G5 N/A
    994213 9ial:D (3.43) BS01 rna N/A GO:0016755 ... K0F6G5 N/A
    994214 9iam:A (3.61) BS01 rna N/A N/A K0F6G5 N/A
    994215 9iam:B (3.61) BS01 rna N/A N/A K0F6G5 N/A
    994216 9iam:C (3.61) BS01 rna N/A N/A K0F6G5 N/A
    994217 9iam:C (3.61) BS02 rna N/A N/A K0F6G5 N/A
    994218 9iam:F (3.61) BS01 rna N/A N/A K0F6G5 N/A
    994219 9iam:F (3.61) BS02 rna N/A N/A K0F6G5 N/A
    994220 9iam:H (3.61) BS01 rna N/A N/A K0F6G5 N/A
    994221 9iam:L (3.61) BS01 rna N/A N/A K0F6G5 N/A
    994222 9ian:A (2.16) BS01 peptide N/A N/A N/A N/A
    994223 9ian:A (2.16) BS02 S5Q N/A N/A N/A N/A
    994224 9ian:A (2.16) BS03 SF4 N/A N/A N/A N/A
    994225 9ian:B (2.16) BS01 SF4 N/A N/A N/A N/A
    994226 9ian:C (2.16) BS01 peptide N/A N/A N/A N/A
    994227 9ian:C (2.16) BS02 SF4 N/A N/A N/A N/A
    994228 9ian:C (2.16) BS03 MG N/A N/A N/A N/A
    994229 9ian:C (2.16) BS04 MG N/A N/A N/A N/A
    994230 9ian:D (2.16) BS01 MG N/A N/A N/A N/A
    994231 9ian:D (2.16) BS02 SF4 N/A N/A N/A N/A
    994232 9ian:D (2.16) BS03 MG N/A N/A N/A N/A
    994233 9ian:F (2.16) BS01 S5Q N/A N/A N/A N/A
    994234 9iao:A (2.14) BS01 peptide N/A N/A N/A N/A
    994235 9iao:A (2.14) BS02 S5Q N/A N/A N/A N/A
    994236 9iao:A (2.14) BS03 SF4 N/A N/A N/A N/A
    994237 9iao:B (2.14) BS01 peptide N/A N/A N/A N/A
    994238 9iao:B (2.14) BS02 S5Q N/A N/A N/A N/A
    994239 9iao:B (2.14) BS03 SF4 N/A N/A N/A N/A
    994240 9iao:C (2.14) BS01 peptide N/A N/A N/A N/A
    994241 9iao:C (2.14) BS02 SF4 N/A N/A N/A N/A
    994242 9iao:C (2.14) BS03 MG N/A N/A N/A N/A
    994243 9iao:C (2.14) BS04 MG N/A N/A N/A N/A
    994244 9iao:D (2.14) BS01 peptide N/A N/A N/A N/A
    994245 9iao:D (2.14) BS02 SF4 N/A N/A N/A N/A
    994246 9iao:D (2.14) BS03 MG N/A N/A N/A N/A
    994247 9iao:D (2.14) BS04 MG N/A N/A N/A N/A
    994248 9iap:A (1.182) BS01 GDP N/A GO:0003924 ... P01116 40709733
    994249 9iap:A (1.182) BS02 A1I1P N/A GO:0003924 ... P01116 40709733
    994250 9iaw:A (0.997) BS01 GDP N/A GO:0003924 ... P01116 40709733
    994251 9iaw:A (0.997) BS02 A1I1R N/A GO:0003924 ... P01116 40709733
    994252 9iax:A (3.97) BS01 dna N/A GO:0000460 ... P78527 N/A
    994253 9iax:A (3.97) BS02 dna N/A GO:0000460 ... P78527 N/A
    994254 9iax:B (3.97) BS01 dna N/A GO:0000723 ... P12956 N/A
    994255 9iax:B (3.97) BS02 dna N/A GO:0000723 ... P12956 N/A
    994256 9iax:C (3.97) BS01 dna N/A GO:0000723 ... P13010 N/A
    994257 9iax:C (3.97) BS02 dna N/A GO:0000723 ... P13010 N/A
    994258 9iay:A (0.953) BS01 GDP N/A GO:0003924 ... P01116 40709733
    994259 9iay:A (0.953) BS02 WYU N/A GO:0003924 ... P01116 40709733
    994260 9ib4:A (1.062) BS01 GDP N/A GO:0003924 ... P01116 40709733
    994261 9ib4:A (1.062) BS02 A1I1Z N/A GO:0003924 ... P01116 40709733
    994262 9ib5:A (1.011) BS01 GDP N/A GO:0003924 ... P01116 40709733
    994263 9ib5:A (1.011) BS02 VU6 N/A GO:0003924 ... P01116 40709733
    994264 9ib7:A (1.5) BS01 FUC N/A N/A Q7MZP1 41105922
    994265 9ib7:A (1.5) BS02 FUC N/A N/A Q7MZP1 41105922
    994266 9ib7:B (1.5) BS01 FUC N/A N/A Q7MZP1 41105922
    994267 9ib7:B (1.5) BS02 FUC N/A N/A Q7MZP1 41105922
    994268 9ib7:B (1.5) BS03 GLA N/A N/A Q7MZP1 41105922
    994269 9ib7:C (1.5) BS01 FUC N/A N/A Q7MZP1 41105922
    994270 9ib7:C (1.5) BS02 FUC N/A N/A Q7MZP1 41105922
    994271 9ib8:A (1.6) BS01 FUC N/A N/A Q7MZP1 41105922
    994272 9ib8:B (1.6) BS01 FUC N/A N/A Q7MZP1 41105922
    994273 9ib8:B (1.6) BS02 FUC N/A N/A Q7MZP1 41105922
    994274 9ib8:C (1.6) BS01 FUC N/A N/A Q7MZP1 41105922
    994275 9ib9:A (1.3) BS01 FUC N/A N/A Q7MZP1 41105922
    994276 9ib9:A (1.3) BS02 GLA N/A N/A Q7MZP1 41105922
    994277 9ib9:A (1.3) BS03 FUC N/A N/A Q7MZP1 41105922
    994278 9ib9:B (1.3) BS01 FUC N/A N/A Q7MZP1 41105922
    994279 9ib9:B (1.3) BS02 FUC N/A N/A Q7MZP1 41105922
    994280 9ib9:C (1.3) BS01 FUC N/A N/A Q7MZP1 41105922
    994281 9ib9:C (1.3) BS02 FUC N/A N/A Q7MZP1 41105922
    994282 9ib9:C (1.3) BS03 GLA N/A N/A Q7MZP1 41105922
    994283 9ib9:D (1.3) BS01 FUC N/A N/A Q7MZP1 41105922
    994284 9ib9:D (1.3) BS02 GLA N/A N/A Q7MZP1 41105922
    994285 9ib9:D (1.3) BS03 FUC N/A N/A Q7MZP1 41105922
    994286 9ib9:E (1.3) BS01 FUC N/A N/A Q7MZP1 41105922
    994287 9ib9:E (1.3) BS02 FUC N/A N/A Q7MZP1 41105922
    994288 9ib9:F (1.3) BS01 GAL N/A N/A Q7MZP1 41105922
    994289 9ib9:F (1.3) BS02 FUC N/A N/A Q7MZP1 41105922
    994290 9ib9:F (1.3) BS03 FUC N/A N/A Q7MZP1 41105922
    994291 9ib9:F (1.3) BS04 GLA N/A N/A Q7MZP1 41105922
    994292 9iba:A (1.4) BS01 RFP N/A N/A O87490 N/A
    994293 9iba:A (1.4) BS02 RFP N/A N/A O87490 N/A
    994294 9ibe:A (1.26) BS01 NAP N/A GO:0016616 ... Q2VEQ7 40770045
    994295 9ibe:A (1.26) BS02 7N5 N/A GO:0016616 ... Q2VEQ7 40770045
    994296 9ibe:B (1.26) BS01 NAP N/A GO:0016616 ... Q2VEQ7 40770045
    994297 9ibe:B (1.26) BS02 7N5 N/A GO:0016616 ... Q2VEQ7 40770045
    994298 9ibe:C (1.26) BS01 NAP N/A GO:0016616 ... Q2VEQ7 40770045
    994299 9ibe:C (1.26) BS02 7N5 N/A GO:0016616 ... Q2VEQ7 40770045
    994300 9ibe:D (1.26) BS01 NAP N/A GO:0016616 ... Q2VEQ7 40770045
    994301 9ibe:D (1.26) BS02 7N5 N/A GO:0016616 ... Q2VEQ7 40770045
    994302 9ibl:A (7.21) BS01 dna N/A N/A Q9T221 N/A
    994303 9ibl:A (7.21) BS02 dna N/A N/A Q9T221 N/A
    994304 9ibl:A (7.21) BS03 ZN N/A N/A Q9T221 N/A
    994305 9ibl:B (7.21) BS01 dna N/A N/A Q9T221 N/A
    994306 9ibl:B (7.21) BS02 dna N/A N/A Q9T221 N/A
    994307 9ibl:B (7.21) BS03 ZN N/A N/A Q9T221 N/A
    994308 9ibl:C (7.21) BS01 dna N/A N/A Q9T221 N/A
    994309 9ibl:C (7.21) BS02 dna N/A N/A Q9T221 N/A
    994310 9ibl:C (7.21) BS03 ZN N/A N/A Q9T221 N/A
    994311 9ibl:D (7.21) BS01 dna N/A N/A Q9T221 N/A
    994312 9ibl:D (7.21) BS02 dna N/A N/A Q9T221 N/A
    994313 9ibl:D (7.21) BS03 ZN N/A N/A Q9T221 N/A
    994314 9ibo:A (2.08) BS01 GLU N/A N/A A0A7Z7VJH2 41364770
    994315 9ibq:A (1.43) BS01 dna N/A N/A N/A N/A
    994316 9ibq:A (1.43) BS02 CA N/A N/A N/A N/A
    994317 9ibr:A (2.78) BS01 A1I1W N/A N/A P41235 40336482
    994318 9ibx:A (2.54) BS01 dna N/A GO:0000262 ... P54099 40404629
    994319 9ibx:A (2.54) BS02 dna N/A GO:0000262 ... P54099 40404629
    994320 9ibx:A (2.54) BS03 CA N/A GO:0000262 ... P54099 40404629
    994321 9ibx:A (2.54) BS04 DCP N/A GO:0000262 ... P54099 40404629
    994322 9iby:A (2.291) BS01 A1I16 N/A N/A A0A140DLX4 41667483
    994323 9iby:B (2.291) BS01 A1I16 N/A N/A A0A140DLX4 41667483
    994324 9ibz:A (3.08) BS01 dna N/A GO:0000262 ... P54099 40404629
    994325 9ibz:A (3.08) BS02 dna N/A GO:0000262 ... P54099 40404629
    994326 9ibz:A (3.08) BS03 CA N/A GO:0000262 ... P54099 40404629
    994327 9ibz:A (3.08) BS04 DCP N/A GO:0000262 ... P54099 40404629
    994328 9ibz:A (3.08) BS05 CA N/A GO:0000262 ... P54099 40404629
    994329 9ic0:A (3.24) BS01 dna N/A GO:0000262 ... P54099 40404629
    994330 9ic0:A (3.24) BS02 dna N/A GO:0000262 ... P54099 40404629
    994331 9ic0:A (3.24) BS03 CA N/A GO:0000262 ... P54099 40404629
    994332 9ic0:A (3.24) BS04 DCP N/A GO:0000262 ... P54099 40404629
    994333 9ic0:A (3.24) BS05 CA N/A GO:0000262 ... P54099 40404629
    994334 9ic1:A (2.73) BS01 dna N/A GO:0000262 ... P54098 40404629
    994335 9ic1:A (2.73) BS02 dna N/A GO:0000262 ... P54098 40404629
    994336 9ic1:A (2.73) BS03 CA N/A GO:0000262 ... P54098 40404629
    994337 9ic1:A (2.73) BS04 DCP N/A GO:0000262 ... P54098 40404629
    994338 9ic2:A (2.5) BS01 A1I1Y N/A GO:0004672 ... P54646 40845097
    994339 9ic2:A (2.5) BS02 MG N/A GO:0004672 ... P54646 40845097
    994340 9ic3:A (2.96) BS01 dna N/A GO:0000262 ... P54098 40404629
    994341 9ic3:A (2.96) BS02 dna N/A GO:0000262 ... P54098 40404629
    994342 9ic3:A (2.96) BS03 CA N/A GO:0000262 ... P54098 40404629
    994343 9ic3:A (2.96) BS04 CA N/A GO:0000262 ... P54098 40404629
    994344 9ic3:A (2.96) BS05 CA N/A GO:0000262 ... P54098 40404629
    994345 9ic3:A (2.96) BS06 DCP N/A GO:0000262 ... P54098 40404629
    994346 9ic9:A (1.6) BS01 A1I3X N/A N/A Q8KRS7 N/A
    994347 9ic9:A (1.6) BS02 A1I3W N/A N/A Q8KRS7 N/A
    994348 9ica:A (3.0) BS01 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 8841120
    994349 9ica:A (3.0) BS02 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 8841120
    994350 9ica:A (3.0) BS03 MN 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 8841120
    994351 9ica:A (3.0) BS04 STP 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 8841120
    994352 9icb:A (3.2) BS01 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 8841120
    994353 9icb:A (3.2) BS02 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 8841120
    994354 9icb:A (3.2) BS03 CO 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 8841120
    994355 9icb:A (3.2) BS04 DTP 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 8841120
    994356 9icc:A (3.1) BS01 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 8841120
    994357 9icc:A (3.1) BS02 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 8841120
    994358 9icc:A (3.1) BS03 DTP 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 8841120
    994359 9icd:A (2.5) BS01 NAP 1.1.1.42 GO:0000287 ... P08200 1888729 MOAD: Kd=125uM
    994360 9ice:A (3.3) BS01 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 8841120
    994361 9ice:A (3.3) BS02 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 8841120
    994362 9icf:A (3.0) BS01 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 8841119
    994363 9icf:A (3.0) BS02 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 8841119
    994364 9icf:A (3.0) BS03 ZN 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 8841119
    994365 9icf:A (3.0) BS04 DTP 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 8841119
    994366 9icg:A (3.0) BS01 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 8841120
    994367 9icg:A (3.0) BS02 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 8841120
    994368 9icg:A (3.0) BS03 ZN 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 8841120
    994369 9icg:A (3.0) BS04 DCP 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 8841120
    994370 9ich:A (2.9) BS01 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 8841120
    994371 9ich:A (2.9) BS02 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 8841120
    994372 9ich:A (2.9) BS03 ZN 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 8841120
    994373 9ich:A (2.9) BS04 DGT 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 8841120
    994374 9ici:A (3.1) BS01 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 8841120
    994375 9ici:A (3.1) BS02 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 8841120
    994376 9ici:A (3.1) BS03 ZN 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 8841120
    994377 9icj:A (3.1) BS01 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 8841120
    994378 9icj:A (3.1) BS02 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 8841120
    994379 9ick:A (2.7) BS01 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 8841119
    994380 9ick:A (2.7) BS02 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 8841119
    994381 9icl:A (2.8) BS01 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 8841120
    994382 9icl:A (2.8) BS02 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 8841120
    994383 9icl:A (2.8) BS03 MN 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 8841120
    994384 9icl:A (2.8) BS04 MN 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 8841120
    994385 9icm:A (2.9) BS01 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 8841118
    994386 9icm:A (2.9) BS02 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 8841118
    994387 9icn:A (3.0) BS01 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 8841119
    994388 9icn:A (3.0) BS02 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 8841119
    994389 9icn:A (3.0) BS03 DCT 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 8841119
    994390 9ico:A (2.9) BS01 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 8841119
    994391 9ico:A (2.9) BS02 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 8841119
    994392 9icp:A (3.1) BS01 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 8841119
    994393 9icp:A (3.1) BS02 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 8841119
    994394 9icq:A (2.9) BS01 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 8841119
    994395 9icq:A (2.9) BS02 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 8841119
    994396 9icq:A (2.9) BS03 MN 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 8841119
    994397 9icq:A (2.9) BS04 DTP 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 8841119
    994398 9icr:A (3.0) BS01 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 8841119
    994399 9icr:A (3.0) BS02 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 8841119
    994400 9icr:A (3.0) BS03 MN 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 8841119

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).