SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    995601 9ihp:P (3.34) BS01 NDP N/A GO:0005739 ... E1UWA9 41032597
    995602 9ihp:R (3.34) BS01 ZN N/A GO:0005739 ... E1UWB7 41032597
    995603 9ihp:W (3.34) BS01 EHZ N/A GO:0005743 ... E1UWD6 41032597
    995604 9ihp:n (3.34) BS01 EHZ N/A GO:0005743 ... E1UWD2 41032597
    995605 9ihq:B (2.9) BS01 SF4 N/A GO:0005739 ... E1UWB5 41032597
    995606 9ihq:D (2.9) BS01 SF4 N/A GO:0005739 ... E1UWA8 41032597
    995607 9ihq:G (2.9) BS01 SF4 N/A GO:0008137 ... E1UWA6 41032597
    995608 9ihq:G (2.9) BS02 SF4 N/A GO:0008137 ... E1UWA6 41032597
    995609 9ihq:G (2.9) BS03 FES N/A GO:0008137 ... E1UWA6 41032597
    995610 9ihq:I (2.9) BS01 SF4 N/A GO:0003954 ... E1UWB3 41032597
    995611 9ihq:I (2.9) BS02 SF4 N/A GO:0003954 ... E1UWB3 41032597
    995612 9ihq:P (2.9) BS01 NDP N/A GO:0005739 ... E1UWA9 41032597
    995613 9ihq:R (2.9) BS01 ZN N/A GO:0005739 ... E1UWB7 41032597
    995614 9ihq:W (2.9) BS01 EHZ N/A GO:0005743 ... E1UWD6 41032597
    995615 9ihq:n (2.9) BS01 EHZ N/A GO:0005743 ... E1UWD2 41032597
    995616 9ihr:B (2.8) BS01 SF4 N/A GO:0005739 ... E1UWB5 41032597
    995617 9ihr:D (2.8) BS01 SF4 N/A GO:0005739 ... E1UWA8 41032597
    995618 9ihr:E (2.8) BS01 FES N/A GO:0005743 ... E1UWB2 41032597
    995619 9ihr:F (2.8) BS01 SF4 N/A GO:0005739 ... E1UWA7 41032597
    995620 9ihr:F (2.8) BS02 FMN N/A GO:0005739 ... E1UWA7 41032597
    995621 9ihr:G (2.8) BS01 SF4 N/A GO:0008137 ... E1UWA6 41032597
    995622 9ihr:G (2.8) BS02 SF4 N/A GO:0008137 ... E1UWA6 41032597
    995623 9ihr:G (2.8) BS03 FES N/A GO:0008137 ... E1UWA6 41032597
    995624 9ihr:I (2.8) BS01 SF4 N/A GO:0003954 ... E1UWB3 41032597
    995625 9ihr:I (2.8) BS02 SF4 N/A GO:0003954 ... E1UWB3 41032597
    995626 9ihr:P (2.8) BS01 NDP N/A GO:0005739 ... E1UWA9 41032597
    995627 9ihr:R (2.8) BS01 ZN N/A GO:0005739 ... E1UWB7 41032597
    995628 9ihr:W (2.8) BS01 EHZ N/A GO:0005743 ... E1UWD6 41032597
    995629 9ihr:n (2.8) BS01 EHZ N/A GO:0005743 ... E1UWD2 41032597
    995630 9iht:A (1.692) BS01 GLC N/A GO:0003824 ... O66934 40419759
    995631 9iht:A (1.692) BS02 GLC N/A GO:0003824 ... O66934 40419759
    995632 9iht:A (1.692) BS03 AC1 N/A GO:0003824 ... O66934 40419759
    995633 9iht:B (1.692) BS01 GLC N/A GO:0003824 ... O66934 40419759
    995634 9iht:B (1.692) BS02 GLC N/A GO:0003824 ... O66934 40419759
    995635 9iht:B (1.692) BS03 AC1 N/A GO:0003824 ... O66934 40419759
    995636 9ihv:A (1.783) BS01 GLC N/A GO:0003824 ... O66934 40419759
    995637 9ihv:A (1.783) BS02 GLC N/A GO:0003824 ... O66934 40419759
    995638 9ihv:A (1.783) BS03 GLC N/A GO:0003824 ... O66934 40419759
    995639 9ihv:A (1.783) BS04 GLC N/A GO:0003824 ... O66934 40419759
    995640 9ihv:A (1.783) BS05 GLC N/A GO:0003824 ... O66934 40419759
    995641 9ihv:B (1.783) BS01 GLC N/A GO:0003824 ... O66934 40419759
    995642 9ihv:B (1.783) BS02 GLC N/A GO:0003824 ... O66934 40419759
    995643 9ihv:B (1.783) BS03 GLC N/A GO:0003824 ... O66934 40419759
    995644 9ihv:B (1.783) BS04 GLC N/A GO:0003824 ... O66934 40419759
    995645 9ihw:A (1.64) BS01 GLC N/A GO:0003824 ... O66934 40419759
    995646 9ihw:A (1.64) BS02 GLC N/A GO:0003824 ... O66934 40419759
    995647 9ihw:A (1.64) BS03 GLC N/A GO:0003824 ... O66934 40419759
    995648 9ihw:A (1.64) BS04 GLC N/A GO:0003824 ... O66934 40419759
    995649 9ihw:A (1.64) BS05 GLC N/A GO:0003824 ... O66934 40419759
    995650 9ihw:A (1.64) BS06 GLC N/A GO:0003824 ... O66934 40419759
    995651 9ihw:B (1.64) BS01 GLC N/A GO:0003824 ... O66934 40419759
    995652 9ihw:B (1.64) BS02 GLC N/A GO:0003824 ... O66934 40419759
    995653 9ihw:B (1.64) BS03 GLC N/A GO:0003824 ... O66934 40419759
    995654 9ihw:B (1.64) BS04 GLC N/A GO:0003824 ... O66934 40419759
    995655 9ihw:B (1.64) BS05 GLC N/A GO:0003824 ... O66934 40419759
    995656 9ihw:B (1.64) BS06 GLC N/A GO:0003824 ... O66934 40419759
    995657 9ihx:A (1.86) BS01 GLC N/A GO:0003824 ... O66934 40419759
    995658 9ihx:A (1.86) BS02 GLC N/A GO:0003824 ... O66934 40419759
    995659 9ihx:A (1.86) BS03 GLC N/A GO:0003824 ... O66934 40419759
    995660 9ihx:B (1.86) BS01 GLC N/A GO:0003824 ... O66934 40419759
    995661 9ihx:B (1.86) BS02 GLC N/A GO:0003824 ... O66934 40419759
    995662 9ihx:B (1.86) BS03 GLC N/A GO:0003824 ... O66934 40419759
    995663 9ii0:A (1.89) BS01 GLC N/A GO:0003824 ... O66934 40419759
    995664 9ii0:A (1.89) BS02 GLC N/A GO:0003824 ... O66934 40419759
    995665 9ii0:A (1.89) BS03 GLC N/A GO:0003824 ... O66934 40419759
    995666 9ii0:A (1.89) BS04 GLC N/A GO:0003824 ... O66934 40419759
    995667 9ii0:A (1.89) BS05 GLC N/A GO:0003824 ... O66934 40419759
    995668 9ii0:B (1.89) BS01 GLC N/A GO:0003824 ... O66934 40419759
    995669 9ii0:B (1.89) BS02 GLC N/A GO:0003824 ... O66934 40419759
    995670 9ii0:B (1.89) BS03 GLC N/A GO:0003824 ... O66934 40419759
    995671 9ii0:B (1.89) BS04 GLC N/A GO:0003824 ... O66934 40419759
    995672 9ii1:A (1.501) BS01 GLC N/A GO:0003824 ... O66934 40419759
    995673 9ii1:A (1.501) BS02 GLC N/A GO:0003824 ... O66934 40419759
    995674 9ii1:A (1.501) BS03 GLC N/A GO:0003824 ... O66934 40419759
    995675 9ii1:A (1.501) BS04 GLC N/A GO:0003824 ... O66934 40419759
    995676 9ii1:A (1.501) BS05 GLC N/A GO:0003824 ... O66934 40419759
    995677 9ii1:A (1.501) BS06 GLC N/A GO:0003824 ... O66934 40419759
    995678 9ii1:A (1.501) BS07 GLC N/A GO:0003824 ... O66934 40419759
    995679 9ii1:B (1.501) BS01 GLC N/A GO:0003824 ... O66934 40419759
    995680 9ii1:B (1.501) BS02 GLC N/A GO:0003824 ... O66934 40419759
    995681 9ii1:B (1.501) BS03 GLC N/A GO:0003824 ... O66934 40419759
    995682 9ii1:B (1.501) BS04 GLC N/A GO:0003824 ... O66934 40419759
    995683 9ii1:B (1.501) BS05 BGC N/A GO:0003824 ... O66934 40419759
    995684 9ii1:B (1.501) BS06 GLC N/A GO:0003824 ... O66934 40419759
    995685 9ii1:B (1.501) BS07 GLC N/A GO:0003824 ... O66934 40419759
    995686 9ii2:B (3.7) BS01 CLR N/A GO:0004930 ... Q14832 40050438
    995687 9ii2:B (3.7) BS02 GLU N/A GO:0004930 ... Q14832 40050438
    995688 9ii2:B (3.7) BS03 CLR N/A GO:0004930 ... Q14832 40050438
    995689 9ii2:B (3.7) BS04 CLR N/A GO:0004930 ... Q14832 40050438
    995690 9ii2:R (3.7) BS01 GLU N/A GO:0004930 ... Q14832 40050438
    995691 9ii2:R (3.7) BS02 CLR N/A GO:0004930 ... Q14832 40050438
    995692 9ii2:R (3.7) BS03 CLR N/A GO:0004930 ... Q14832 40050438
    995693 9ii2:R (3.7) BS04 CLR N/A GO:0004930 ... Q14832 40050438
    995694 9ii3:B (3.9) BS01 GLU N/A GO:0004930 ... Q14832 40050438
    995695 9ii3:R (3.9) BS01 GLU N/A GO:0004930 ... Q14832 40050438
    995696 9ii5:A (1.49) BS01 A1D9F N/A N/A P19474 40247740
    995697 9ii6:A (3.27) BS01 H6P N/A N/A Q7KYR7 40334665
    995698 9ii6:B (3.27) BS01 H6P N/A N/A O00481 40334665
    995699 9ii7:A (3.5) BS01 rna N/A GO:0000785 ... C4R4Y0 40447801
    995700 9ii7:A (3.5) BS02 dna N/A GO:0000785 ... C4R4Y0 40447801
    995701 9ii7:A (3.5) BS03 ZN N/A GO:0000785 ... C4R4Y0 40447801
    995702 9ii7:A (3.5) BS04 ZN N/A GO:0000785 ... C4R4Y0 40447801
    995703 9ii7:A (3.5) BS05 MG N/A GO:0000785 ... C4R4Y0 40447801
    995704 9ii7:B (3.5) BS01 dna N/A GO:0001172 ... C4QZQ7 40447801
    995705 9ii7:B (3.5) BS02 rna N/A GO:0001172 ... C4QZQ7 40447801
    995706 9ii7:B (3.5) BS03 dna N/A GO:0001172 ... C4QZQ7 40447801
    995707 9ii7:B (3.5) BS04 ZN N/A GO:0001172 ... C4QZQ7 40447801
    995708 9ii7:E (3.5) BS01 dna N/A GO:0001172 ... C4R3P8 40447801
    995709 9ii7:I (3.5) BS01 ZN N/A GO:0001172 ... C4QY79 40447801
    995710 9ii7:I (3.5) BS02 ZN N/A GO:0001172 ... C4QY79 40447801
    995711 9ii7:J (3.5) BS01 ZN N/A GO:0003677 ... C4R009 40447801
    995712 9ii7:L (3.5) BS01 ZN N/A GO:0003677 ... C4QWA8 40447801
    995713 9ii7:M (3.5) BS01 ZN N/A GO:0000993 ... C4QZ45 40447801
    995714 9ii7:V (3.5) BS01 ZN N/A GO:0000182 ... C4R0E6 40447801
    995715 9ii7:W (3.5) BS01 dna N/A GO:0003711 ... C4R370 40447801
    995716 9ii7:a (3.5) BS01 dna N/A GO:0000776 ... P84243 40447801
    995717 9ii7:a (3.5) BS02 dna N/A GO:0000776 ... P84243 40447801
    995718 9ii7:b (3.5) BS01 dna N/A GO:0000781 ... P62805 40447801
    995719 9ii7:b (3.5) BS02 dna N/A GO:0000781 ... P62805 40447801
    995720 9ii7:c (3.5) BS01 dna N/A GO:0000786 ... P0C5Z0 40447801
    995721 9ii7:d (3.5) BS01 dna N/A GO:0000786 ... P06899 40447801
    995722 9ii7:e (3.5) BS01 dna N/A GO:0000776 ... P84243 40447801
    995723 9ii7:e (3.5) BS02 dna N/A GO:0000776 ... P84243 40447801
    995724 9ii7:f (3.5) BS01 dna N/A GO:0000781 ... P62805 40447801
    995725 9ii7:f (3.5) BS02 dna N/A GO:0000781 ... P62805 40447801
    995726 9ii8:A (3.16) BS01 dna N/A GO:0003676 ... Q2FYH5 N/A
    995727 9iib:A (2.75) BS01 6JP N/A N/A A0A6P0BW74 41505558
    995728 9iib:A (2.75) BS02 6JP N/A N/A A0A6P0BW74 41505558
    995729 9iib:B (2.75) BS01 6JP N/A N/A A0A6P0BW74 41505558
    995730 9iib:B (2.75) BS02 6JP N/A N/A A0A6P0BW74 41505558
    995731 9iib:C (2.75) BS01 6JP N/A N/A A0A6P0BW74 41505558
    995732 9iib:C (2.75) BS02 6JP N/A N/A A0A6P0BW74 41505558
    995733 9iib:D (2.75) BS01 6JP N/A N/A A0A6P0BW74 41505558
    995734 9iib:D (2.75) BS02 6JP N/A N/A A0A6P0BW74 41505558
    995735 9iic:C (2.78) BS01 ZN N/A GO:0004842 ... Q96EP0 40957900
    995736 9iic:C (2.78) BS02 ZN N/A GO:0004842 ... Q96EP0 40957900
    995737 9iic:C (2.78) BS03 ZN N/A GO:0004842 ... Q96EP0 40957900
    995738 9iic:C (2.78) BS04 ZN N/A GO:0004842 ... Q96EP0 40957900
    995739 9iic:D (2.78) BS01 ZN N/A GO:0004842 ... Q96EP0 40957900
    995740 9iic:D (2.78) BS02 ZN N/A GO:0004842 ... Q96EP0 40957900
    995741 9iic:D (2.78) BS03 ZN N/A GO:0004842 ... Q96EP0 40957900
    995742 9iic:D (2.78) BS04 ZN N/A GO:0004842 ... Q96EP0 40957900
    995743 9iie:A (3.14) BS01 BMA N/A N/A P0DOX5 N/A
    995744 9iie:A (3.14) BS02 GAL N/A N/A P0DOX5 N/A
    995745 9iie:B (3.14) BS01 BMA N/A N/A P0DOX5 N/A
    995746 9iif:A (2.16) BS01 A1L2L N/A GO:0000122 ... Q9NWT6 39291299
    995747 9iif:A (2.16) BS02 ZN N/A GO:0000122 ... Q9NWT6 39291299
    995748 9iig:M (2.6) BS01 HEM N/A GO:0004322 ... Q8EHV1 40167232
    995749 9iig:N (2.6) BS01 HEM N/A GO:0004322 ... Q8EHV1 40167232
    995750 9iig:O (2.6) BS01 HEM N/A GO:0004322 ... Q8EHV1 40167232
    995751 9iig:P (2.6) BS01 HEM N/A GO:0004322 ... Q8EHV1 40167232
    995752 9iig:Q (2.6) BS01 HEM N/A GO:0004322 ... Q8EHV1 40167232
    995753 9iig:R (2.6) BS01 HEM N/A GO:0004322 ... Q8EHV1 40167232
    995754 9iig:S (2.6) BS01 HEM N/A GO:0004322 ... Q8EHV1 40167232
    995755 9iig:T (2.6) BS01 HEM N/A GO:0004322 ... Q8EHV1 40167232
    995756 9iig:U (2.6) BS01 HEM N/A GO:0004322 ... Q8EHV1 40167232
    995757 9iig:V (2.6) BS01 HEM N/A GO:0004322 ... Q8EHV1 40167232
    995758 9iig:W (2.6) BS01 HEM N/A GO:0004322 ... Q8EHV1 40167232
    995759 9iig:X (2.6) BS01 HEM N/A GO:0004322 ... Q8EHV1 40167232
    995760 9iik:D (4.12) BS01 H6P N/A GO:0001817 ... O00481 40334665
    995761 9iik:E (4.12) BS01 H6P N/A GO:0001817 ... Q7KYR7 40334665
    995762 9iil:A (2.2) BS01 NAD N/A GO:0006006 ... N/A N/A
    995763 9iil:B (2.2) BS01 NAD N/A GO:0006006 ... N/A N/A
    995764 9iil:C (2.2) BS01 NAD N/A GO:0006006 ... N/A N/A
    995765 9iil:D (2.2) BS01 NAD N/A GO:0006006 ... N/A N/A
    995766 9iim:A (2.74) BS01 NAD N/A GO:0006006 ... N/A N/A
    995767 9iim:B (2.74) BS01 NAD N/A GO:0006006 ... N/A N/A
    995768 9iim:C (2.74) BS01 NAD N/A GO:0006006 ... N/A N/A
    995769 9iim:D (2.74) BS01 NAD N/A GO:0006006 ... N/A N/A
    995770 9iin:A (3.2) BS01 ATP N/A GO:0003677 ... Q8WVB6 41730002
    995771 9iin:B (3.2) BS01 ATP N/A GO:0000076 ... P35250 41730002
    995772 9iin:C (3.2) BS01 ATP N/A GO:0000076 ... P40937 41730002
    995773 9iin:E (3.2) BS01 ADP N/A GO:0000076 ... P40938 41730002
    995774 9iip:A (2.45) BS01 ED6 N/A GO:0005524 ... Q58T34 39993526
    995775 9iir:A (2.93) BS01 YLI N/A GO:0004888 ... P36544 40195322
    995776 9iir:A (2.93) BS02 CA N/A GO:0004888 ... P36544 40195322
    995777 9iir:A (2.93) BS03 CLR N/A GO:0004888 ... P36544 40195322
    995778 9iir:A (2.93) BS04 YLI N/A GO:0004888 ... P36544 40195322
    995779 9iir:B (2.93) BS01 YLI N/A GO:0004888 ... P36544 40195322
    995780 9iir:B (2.93) BS02 YLI N/A GO:0004888 ... P36544 40195322
    995781 9iir:B (2.93) BS03 CA N/A GO:0004888 ... P36544 40195322
    995782 9iir:B (2.93) BS04 CLR N/A GO:0004888 ... P36544 40195322
    995783 9iir:C (2.93) BS01 YLI N/A GO:0004888 ... P36544 40195322
    995784 9iir:C (2.93) BS02 YLI N/A GO:0004888 ... P36544 40195322
    995785 9iir:C (2.93) BS03 CA N/A GO:0004888 ... P36544 40195322
    995786 9iir:C (2.93) BS04 CLR N/A GO:0004888 ... P36544 40195322
    995787 9iir:D (2.93) BS01 YLI N/A GO:0004888 ... P36544 40195322
    995788 9iir:D (2.93) BS02 YLI N/A GO:0004888 ... P36544 40195322
    995789 9iir:D (2.93) BS03 CA N/A GO:0004888 ... P36544 40195322
    995790 9iir:D (2.93) BS04 CLR N/A GO:0004888 ... P36544 40195322
    995791 9iir:E (2.93) BS01 YLI N/A GO:0004888 ... P36544 40195322
    995792 9iir:E (2.93) BS02 YLI N/A GO:0004888 ... P36544 40195322
    995793 9iir:E (2.93) BS03 CA N/A GO:0004888 ... P36544 40195322
    995794 9iir:E (2.93) BS04 CLR N/A GO:0004888 ... P36544 40195322
    995795 9iit:A (2.3) BS01 GTP N/A GO:0005524 ... Q58T34 39993526
    995796 9iit:A (2.3) BS02 GTP N/A GO:0005524 ... Q58T34 39993526
    995797 9iit:B (2.3) BS01 GTP N/A GO:0005524 ... Q58T34 39993526
    995798 9iit:B (2.3) BS02 GDP N/A GO:0005524 ... Q58T34 39993526
    995799 9iiu:A (2.98) BS01 peptide N/A GO:0005506 ... P07753 40579438
    995800 9iiu:A (2.98) BS02 FE2 N/A GO:0005506 ... P07753 40579438

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).