SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    996201 9il8:A (2.3) BS01 JXG N/A GO:0008800 ... P52682 N/A
    996202 9il8:B (2.3) BS01 JXG N/A GO:0008800 ... P52682 N/A
    996203 9il9:A (2.28) BS01 NXL N/A GO:0008800 ... P52682 N/A
    996204 9il9:B (2.28) BS01 NXL N/A GO:0008800 ... P52682 N/A
    996205 9ila:A (1.56) BS01 BGC N/A GO:0030246 ... Q14165 N/A
    996206 9ila:A (1.56) BS02 GLC N/A GO:0030246 ... Q14165 N/A
    996207 9ila:B (1.56) BS01 BGC N/A GO:0030246 ... Q14165 N/A
    996208 9ila:B (1.56) BS02 GLC N/A GO:0030246 ... Q14165 N/A
    996209 9ild:A (2.179) BS01 peptide N/A N/A P0DTF3 N/A
    996210 9ild:A (2.179) BS02 ZN N/A N/A P0DTF3 N/A
    996211 9ile:A (2.38) BS01 MK7 N/A GO:0008800 ... P52682 N/A
    996212 9ilf:A (1.56) BS01 GLC N/A GO:0030246 ... Q14165 N/A
    996213 9ilf:A (1.56) BS02 GLC N/A GO:0030246 ... Q14165 N/A
    996214 9ilf:B (1.56) BS01 GLC N/A GO:0030246 ... Q14165 N/A
    996215 9ilf:B (1.56) BS02 GLC N/A GO:0030246 ... Q14165 N/A
    996216 9ill:A (-1.00) BS01 dna N/A GO:0003700 ... Q2G2U9 37405582
    996217 9ill:A (-1.00) BS02 dna N/A GO:0003700 ... Q2G2U9 37405582
    996218 9iln:A (2.49) BS01 A1D9M N/A GO:0003950 ... P09874 N/A
    996219 9iln:B (2.49) BS01 A1D9M N/A GO:0003950 ... P09874 N/A
    996220 9ilr:A (2.25) BS01 ACO N/A GO:0016747 ... Q99Q62 39973444
    996221 9ilt:A (3.25) BS01 peptide N/A N/A A9WEV2 39500318
    996222 9ilt:A (3.25) BS02 HEC N/A N/A A9WEV2 39500318
    996223 9ilt:A (3.25) BS03 HEC N/A N/A A9WEV2 39500318
    996224 9ilt:A (3.25) BS04 HEC N/A N/A A9WEV2 39500318
    996225 9ilt:A (3.25) BS05 HEC N/A N/A A9WEV2 39500318
    996226 9ilt:A (3.25) BS06 HEC N/A N/A A9WEV2 39500318
    996227 9ilt:B (3.25) BS01 HEC N/A GO:0016491 ... A9WEV3 39500318
    996228 9ilt:B (3.25) BS02 HEC N/A GO:0016491 ... A9WEV3 39500318
    996229 9ilt:B (3.25) BS03 SF4 N/A GO:0016491 ... A9WEV3 39500318
    996230 9ilt:B (3.25) BS04 SF4 N/A GO:0016491 ... A9WEV3 39500318
    996231 9ilt:B (3.25) BS05 SF4 N/A GO:0016491 ... A9WEV3 39500318
    996232 9ilt:B (3.25) BS06 F3S N/A GO:0016491 ... A9WEV3 39500318
    996233 9ilt:E (3.25) BS01 HEC N/A GO:0009055 ... A9WEV6 39500318
    996234 9ilt:E (3.25) BS02 HEC N/A GO:0009055 ... A9WEV6 39500318
    996235 9ilt:E (3.25) BS03 HEC N/A GO:0009055 ... A9WEV6 39500318
    996236 9ilt:G (3.25) BS01 peptide N/A N/A A9WEV8 39500318
    996237 9ilz:A (2.95) BS01 dna N/A GO:0000166 ... A0A7H0DN89 40467608
    996238 9ilz:A (2.95) BS02 ADP N/A GO:0000166 ... A0A7H0DN89 40467608
    996239 9ilz:A (2.95) BS03 ATP N/A GO:0000166 ... A0A7H0DN89 40467608
    996240 9ilz:B (2.95) BS01 ATP N/A GO:0000166 ... A0A7H0DN89 40467608
    996241 9ilz:C (2.95) BS01 ATP N/A GO:0000166 ... A0A7H0DN89 40467608
    996242 9ilz:D (2.95) BS01 dna N/A GO:0000166 ... A0A7H0DN89 40467608
    996243 9ilz:F (2.95) BS01 ATP N/A GO:0000166 ... A0A7H0DN89 40467608
    996244 9ilz:F (2.95) BS02 ZN N/A GO:0000166 ... A0A7H0DN89 40467608
    996245 9im0:A (2.95) BS01 ATP N/A GO:0000166 ... A0A7H0DN89 40467608
    996246 9im0:O (2.95) BS01 ZN N/A GO:0000166 ... A0A7H0DN89 40467608
    996247 9im0:O (2.95) BS02 ATP N/A GO:0000166 ... A0A7H0DN89 40467608
    996248 9im1:A (2.88) BS01 dna N/A GO:0000166 ... A0A7H0DN89 40467608
    996249 9im1:A (2.88) BS02 ATP N/A GO:0000166 ... A0A7H0DN89 40467608
    996250 9im1:B (2.88) BS01 dna N/A GO:0000166 ... A0A7H0DN89 40467608
    996251 9im1:B (2.88) BS02 ATP N/A GO:0000166 ... A0A7H0DN89 40467608
    996252 9im1:C (2.88) BS01 dna N/A GO:0000166 ... A0A7H0DN89 40467608
    996253 9im1:C (2.88) BS02 ATP N/A GO:0000166 ... A0A7H0DN89 40467608
    996254 9im1:C (2.88) BS03 ATP N/A GO:0000166 ... A0A7H0DN89 40467608
    996255 9im1:D (2.88) BS01 dna N/A GO:0000166 ... A0A7H0DN89 40467608
    996256 9im1:D (2.88) BS02 ADP N/A GO:0000166 ... A0A7H0DN89 40467608
    996257 9im1:E (2.88) BS01 dna N/A GO:0000166 ... A0A7H0DN89 40467608
    996258 9im1:E (2.88) BS02 ADP N/A GO:0000166 ... A0A7H0DN89 40467608
    996259 9im2:A (3.12) BS01 dna N/A GO:0000166 ... A0A7H0DN89 40467608
    996260 9im2:A (3.12) BS02 ATP N/A GO:0000166 ... A0A7H0DN89 40467608
    996261 9im2:B (3.12) BS01 dna N/A GO:0000166 ... A0A7H0DN89 40467608
    996262 9im2:B (3.12) BS02 ATP N/A GO:0000166 ... A0A7H0DN89 40467608
    996263 9im2:B (3.12) BS03 ATP N/A GO:0000166 ... A0A7H0DN89 40467608
    996264 9im2:C (3.12) BS01 dna N/A GO:0000166 ... A0A7H0DN89 40467608
    996265 9im2:C (3.12) BS02 ATP N/A GO:0000166 ... A0A7H0DN89 40467608
    996266 9im2:D (3.12) BS01 dna N/A GO:0000166 ... A0A7H0DN89 40467608
    996267 9im2:D (3.12) BS02 ADP N/A GO:0000166 ... A0A7H0DN89 40467608
    996268 9im2:E (3.12) BS01 AMP N/A GO:0000166 ... A0A7H0DN89 40467608
    996269 9im4:A (2.794) BS01 peptide N/A N/A P42568 N/A
    996270 9im4:B (2.794) BS01 peptide N/A N/A P42568 N/A
    996271 9im5:A (2.86) BS01 GTP N/A GO:0000226 ... Q2XVP4 40067895
    996272 9im5:A (2.86) BS02 CA N/A GO:0000226 ... Q2XVP4 40067895
    996273 9im5:B (2.86) BS01 A1L2T N/A GO:0000226 ... P02554 40067895
    996274 9im5:B (2.86) BS02 GDP N/A GO:0000226 ... P02554 40067895
    996275 9im5:C (2.86) BS01 GTP N/A GO:0000226 ... Q2XVP4 40067895
    996276 9im5:C (2.86) BS02 CA N/A GO:0000226 ... Q2XVP4 40067895
    996277 9im5:D (2.86) BS01 GTP N/A GO:0000226 ... P02554 40067895
    996278 9im5:D (2.86) BS02 A1L2T N/A GO:0000226 ... P02554 40067895
    996279 9im5:F (2.86) BS01 ACP N/A GO:0000226 ... A0A8V0Z8P0 40067895
    996280 9im7:A (1.93) BS01 peptide N/A N/A Q07832 40871048
    996281 9im8:A (2.1) BS01 A1D9M N/A GO:0003950 ... Q9UGN5 N/A
    996282 9im8:B (2.1) BS01 A1D9M N/A GO:0003950 ... Q9UGN5 N/A
    996283 9im9:A (1.81) BS01 A1D9Q N/A GO:0016491 ... A0A977K7H6 40219972
    996284 9im9:B (1.81) BS01 A1D9Q N/A GO:0016491 ... A0A977K7H6 40219972
    996285 9ima:A (2.65) BS01 CLR N/A GO:0004930 ... Q9NZD1 39181182
    996286 9ima:A (2.65) BS02 CLR N/A GO:0004930 ... Q9NZD1 39181182
    996287 9ima:A (2.65) BS03 CLR N/A GO:0004930 ... Q9NZD1 39181182
    996288 9ima:B (2.65) BS01 CLR N/A GO:0004930 ... Q9NZD1 39181182
    996289 9ima:B (2.65) BS02 CLR N/A GO:0004930 ... Q9NZD1 39181182
    996290 9ima:B (2.65) BS03 CLR N/A GO:0004930 ... Q9NZD1 39181182
    996291 9imb:A (2.9) BS01 rna N/A GO:0000049 ... Q8TEA1 39862858
    996292 9imb:A (2.9) BS02 SFG N/A GO:0000049 ... Q8TEA1 39862858
    996293 9imb:B (2.9) BS01 rna N/A GO:0000049 ... Q8TEA1 39862858
    996294 9imb:B (2.9) BS02 SFG N/A GO:0000049 ... Q8TEA1 39862858
    996295 9imi:A (2.0) BS01 UDP N/A GO:0008194 ... A0A9Y1LBL2 N/A
    996296 9imj:A (2.8) BS01 MG N/A GO:0003677 ... A0A346FJ89 39379365
    996297 9imj:A (2.8) BS02 ANP N/A GO:0003677 ... A0A346FJ89 39379365
    996298 9imk:A (4.01) BS01 rna N/A GO:0003723 ... P0DTD1 41130208
    996299 9imk:A (4.01) BS02 rna N/A GO:0003723 ... P0DTD1 41130208
    996300 9imk:A (4.01) BS03 rna N/A GO:0003723 ... P0DTD1 41130208
    996301 9imk:A (4.01) BS04 ZN N/A GO:0003723 ... P0DTD1 41130208
    996302 9imk:A (4.01) BS05 ZN N/A GO:0003723 ... P0DTD1 41130208
    996303 9imk:B (4.01) BS01 rna N/A GO:0004197 ... P0DTD1 41130208
    996304 9imk:B (4.01) BS02 rna N/A GO:0004197 ... P0DTD1 41130208
    996305 9imk:E (4.01) BS01 ZN N/A GO:0004386 ... P0DTD1 41130208
    996306 9imk:E (4.01) BS02 ZN N/A GO:0004386 ... P0DTD1 41130208
    996307 9imk:E (4.01) BS03 ZN N/A GO:0004386 ... P0DTD1 41130208
    996308 9imk:F (4.01) BS01 ZN N/A GO:0004386 ... P0DTD1 41130208
    996309 9imk:F (4.01) BS02 ZN N/A GO:0004386 ... P0DTD1 41130208
    996310 9imk:F (4.01) BS03 ZN N/A GO:0004386 ... P0DTD1 41130208
    996311 9imk:H (4.01) BS01 rna N/A GO:0003723 ... P0DTD1 41130208
    996312 9imk:H (4.01) BS02 rna N/A GO:0003723 ... P0DTD1 41130208
    996313 9imk:H (4.01) BS03 rna N/A GO:0003723 ... P0DTD1 41130208
    996314 9imk:H (4.01) BS04 ZN N/A GO:0003723 ... P0DTD1 41130208
    996315 9imk:H (4.01) BS05 ZN N/A GO:0003723 ... P0DTD1 41130208
    996316 9imk:I (4.01) BS01 rna N/A GO:0004197 ... P0DTD1 41130208
    996317 9imk:I (4.01) BS02 rna N/A GO:0004197 ... P0DTD1 41130208
    996318 9imk:L (4.01) BS01 rna N/A GO:0004386 ... P0DTD1 41130208
    996319 9imk:L (4.01) BS02 ZN N/A GO:0004386 ... P0DTD1 41130208
    996320 9imk:L (4.01) BS03 ZN N/A GO:0004386 ... P0DTD1 41130208
    996321 9imk:L (4.01) BS04 ZN N/A GO:0004386 ... P0DTD1 41130208
    996322 9imk:M (4.01) BS01 ZN N/A GO:0004386 ... P0DTD1 41130208
    996323 9imk:M (4.01) BS02 ZN N/A GO:0004386 ... P0DTD1 41130208
    996324 9imk:M (4.01) BS03 ZN N/A GO:0004386 ... P0DTD1 41130208
    996325 9iml:C (2.78) BS01 XB7 N/A GO:0004843 ... Q93009 39999290
    996326 9imm:A (3.22) BS01 rna N/A GO:0003723 ... P0DTD1 41130208
    996327 9imm:A (3.22) BS02 rna N/A GO:0003723 ... P0DTD1 41130208
    996328 9imm:A (3.22) BS03 rna N/A GO:0003723 ... P0DTD1 41130208
    996329 9imm:A (3.22) BS04 ZN N/A GO:0003723 ... P0DTD1 41130208
    996330 9imm:B (3.22) BS01 rna N/A GO:0004197 ... P0DTD1 41130208
    996331 9imm:D (3.22) BS01 rna N/A GO:0004197 ... P0DTD1 41130208
    996332 9imm:E (3.22) BS01 ZN N/A GO:0004386 ... P0DTD1 41130208
    996333 9imm:E (3.22) BS02 ZN N/A GO:0004386 ... P0DTD1 41130208
    996334 9imm:E (3.22) BS03 ZN N/A GO:0004386 ... P0DTD1 41130208
    996335 9imm:F (3.22) BS01 ZN N/A GO:0004386 ... P0DTD1 41130208
    996336 9imm:F (3.22) BS02 ZN N/A GO:0004386 ... P0DTD1 41130208
    996337 9imm:F (3.22) BS03 ZN N/A GO:0004386 ... P0DTD1 41130208
    996338 9imn:A (2.97) BS01 FE2 N/A GO:0005506 ... P07753 40579438
    996339 9imn:A (2.97) BS02 CLA N/A GO:0005506 ... P07753 40579438
    996340 9imn:A (2.97) BS03 CLA N/A GO:0005506 ... P07753 40579438
    996341 9imn:A (2.97) BS04 CLA N/A GO:0005506 ... P07753 40579438
    996342 9imn:A (2.97) BS05 PHO N/A GO:0005506 ... P07753 40579438
    996343 9imn:A (2.97) BS06 CLA N/A GO:0005506 ... P07753 40579438
    996344 9imn:A (2.97) BS07 PHO N/A GO:0005506 ... P07753 40579438
    996345 9imn:A (2.97) BS08 BCT N/A GO:0005506 ... P07753 40579438
    996346 9imn:B (2.97) BS01 CLA N/A GO:0009521 ... P37255 40579438
    996347 9imn:B (2.97) BS02 CLA N/A GO:0009521 ... P37255 40579438
    996348 9imn:B (2.97) BS03 CLA N/A GO:0009521 ... P37255 40579438
    996349 9imn:B (2.97) BS04 CLA N/A GO:0009521 ... P37255 40579438
    996350 9imn:B (2.97) BS05 CLA N/A GO:0009521 ... P37255 40579438
    996351 9imn:B (2.97) BS06 CLA N/A GO:0009521 ... P37255 40579438
    996352 9imn:B (2.97) BS07 CLA N/A GO:0009521 ... P37255 40579438
    996353 9imn:B (2.97) BS08 CLA N/A GO:0009521 ... P37255 40579438
    996354 9imn:B (2.97) BS09 CLA N/A GO:0009521 ... P37255 40579438
    996355 9imn:B (2.97) BS10 CLA N/A GO:0009521 ... P37255 40579438
    996356 9imn:B (2.97) BS11 CLA N/A GO:0009521 ... P37255 40579438
    996357 9imn:B (2.97) BS12 CLA N/A GO:0009521 ... P37255 40579438
    996358 9imn:B (2.97) BS13 CLA N/A GO:0009521 ... P37255 40579438
    996359 9imn:B (2.97) BS14 CLA N/A GO:0009521 ... P37255 40579438
    996360 9imn:B (2.97) BS15 CLA N/A GO:0009521 ... P37255 40579438
    996361 9imn:B (2.97) BS16 CLA N/A GO:0009521 ... P37255 40579438
    996362 9imn:C (2.97) BS01 CLA N/A GO:0005737 ... P10898 40579438
    996363 9imn:C (2.97) BS02 CLA N/A GO:0005737 ... P10898 40579438
    996364 9imn:C (2.97) BS03 CLA N/A GO:0005737 ... P10898 40579438
    996365 9imn:C (2.97) BS04 CLA N/A GO:0005737 ... P10898 40579438
    996366 9imn:C (2.97) BS05 CLA N/A GO:0005737 ... P10898 40579438
    996367 9imn:C (2.97) BS06 CLA N/A GO:0005737 ... P10898 40579438
    996368 9imn:C (2.97) BS07 CLA N/A GO:0005737 ... P10898 40579438
    996369 9imn:C (2.97) BS08 CLA N/A GO:0005737 ... P10898 40579438
    996370 9imn:C (2.97) BS09 CLA N/A GO:0005737 ... P10898 40579438
    996371 9imn:C (2.97) BS10 CLA N/A GO:0005737 ... P10898 40579438
    996372 9imn:C (2.97) BS11 CLA N/A GO:0005737 ... P10898 40579438
    996373 9imn:C (2.97) BS12 CLA N/A GO:0005737 ... P10898 40579438
    996374 9imn:C (2.97) BS13 CLA N/A GO:0005737 ... P10898 40579438
    996375 9imn:D (2.97) BS01 FE2 N/A GO:0005506 ... P06007 40579438
    996376 9imn:D (2.97) BS02 CLA N/A GO:0005506 ... P06007 40579438
    996377 9imn:D (2.97) BS03 CLA N/A GO:0005506 ... P06007 40579438
    996378 9imn:D (2.97) BS04 PHO N/A GO:0005506 ... P06007 40579438
    996379 9imn:D (2.97) BS05 CLA N/A GO:0005506 ... P06007 40579438
    996380 9imn:D (2.97) BS06 PHO N/A GO:0005506 ... P06007 40579438
    996381 9imn:D (2.97) BS07 BCT N/A GO:0005506 ... P06007 40579438
    996382 9imn:D (2.97) BS08 CLA N/A GO:0005506 ... P06007 40579438
    996383 9imn:D (2.97) BS09 CLA N/A GO:0005506 ... P06007 40579438
    996384 9imn:E (2.97) BS01 HEM N/A GO:0005506 ... P48268 40579438
    996385 9imn:F (2.97) BS01 HEM N/A GO:0009523 ... Q08363 40579438
    996386 9imn:H (2.97) BS01 CLA N/A GO:0009523 ... P22666 40579438
    996387 9imn:H (2.97) BS02 CLA N/A GO:0009523 ... P22666 40579438
    996388 9imn:H (2.97) BS03 CLA N/A GO:0009523 ... P22666 40579438
    996389 9imn:I (2.97) BS01 peptide N/A GO:0005737 ... P59763 40579438
    996390 9imn:I (2.97) BS02 CLA N/A GO:0005737 ... P59763 40579438
    996391 9imn:K (2.97) BS01 CLA N/A GO:0009523 ... P18263 40579438
    996392 9imn:L (2.97) BS01 peptide N/A GO:0005737 ... P32974 40579438
    996393 9imn:Z (2.97) BS01 CLA N/A GO:0009523 ... P92276 40579438
    996394 9imn:a (2.97) BS01 FE2 N/A GO:0005506 ... P07753 40579438
    996395 9imn:a (2.97) BS02 CLA N/A GO:0005506 ... P07753 40579438
    996396 9imn:a (2.97) BS03 CLA N/A GO:0005506 ... P07753 40579438
    996397 9imn:a (2.97) BS04 CLA N/A GO:0005506 ... P07753 40579438
    996398 9imn:a (2.97) BS05 PHO N/A GO:0005506 ... P07753 40579438
    996399 9imn:a (2.97) BS06 CLA N/A GO:0005506 ... P07753 40579438
    996400 9imn:a (2.97) BS07 CLA N/A GO:0005506 ... P07753 40579438

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).