SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    997201 9is4:d (2.9) BS05 CLA N/A GO:0005506 ... P06007 40579438
    997202 9is4:d (2.9) BS06 PHO N/A GO:0005506 ... P06007 40579438
    997203 9is4:d (2.9) BS07 CLA N/A GO:0005506 ... P06007 40579438
    997204 9is4:d (2.9) BS08 CLA N/A GO:0005506 ... P06007 40579438
    997205 9is4:e (2.9) BS01 HEM N/A GO:0005506 ... P48268 40579438
    997206 9is4:f (2.9) BS01 HEM N/A GO:0009523 ... Q08363 40579438
    997207 9is4:h (2.9) BS01 CLA N/A GO:0009523 ... P22666 40579438
    997208 9is4:h (2.9) BS02 CLA N/A GO:0009523 ... P22666 40579438
    997209 9is4:h (2.9) BS03 CLA N/A GO:0009523 ... P22666 40579438
    997210 9is4:i (2.9) BS01 CLA N/A GO:0005737 ... P59763 40579438
    997211 9is4:k (2.9) BS01 CLA N/A GO:0009523 ... P18263 40579438
    997212 9is4:l (2.9) BS01 peptide N/A GO:0005737 ... P32974 40579438
    997213 9is4:l (2.9) BS02 CLA N/A GO:0005737 ... P32974 40579438
    997214 9is4:m (2.9) BS01 CLA N/A GO:0005737 ... P92277 40579438
    997215 9is4:r (2.9) BS01 CHL N/A GO:0009765 ... Q93WD2 40579438
    997216 9is4:r (2.9) BS02 CLA N/A GO:0009765 ... Q93WD2 40579438
    997217 9is4:r (2.9) BS03 CLA N/A GO:0009765 ... Q93WD2 40579438
    997218 9is4:r (2.9) BS04 CLA N/A GO:0009765 ... Q93WD2 40579438
    997219 9is4:r (2.9) BS05 CHL N/A GO:0009765 ... Q93WD2 40579438
    997220 9is4:r (2.9) BS06 CHL N/A GO:0009765 ... Q93WD2 40579438
    997221 9is4:r (2.9) BS07 CHL N/A GO:0009765 ... Q93WD2 40579438
    997222 9is4:r (2.9) BS08 CLA N/A GO:0009765 ... Q93WD2 40579438
    997223 9is4:r (2.9) BS09 CLA N/A GO:0009765 ... Q93WD2 40579438
    997224 9is4:z (2.9) BS01 CLA N/A GO:0009523 ... P92276 40579438
    997225 9is6:E (3.32) BS01 ZN N/A GO:0000338 ... Q9FVU9 N/A
    997226 9is9:A (2.12) BS01 9L9 N/A GO:0000287 ... P13995 39591507
    997227 9is9:A (2.12) BS02 NAD N/A GO:0000287 ... P13995 39591507
    997228 9is9:B (2.12) BS01 9L9 N/A GO:0000287 ... P13995 39591507
    997229 9is9:B (2.12) BS02 NAD N/A GO:0000287 ... P13995 39591507
    997230 9isb:A (2.24) BS01 ADP N/A GO:0005524 ... P76594 40498448
    997231 9isb:B (2.24) BS01 ATP N/A GO:0005524 ... P76594 40498448
    997232 9isc:A (2.54) BS01 NAD N/A GO:0000287 ... P13995 39591507
    997233 9isc:A (2.54) BS02 A1L22 N/A GO:0000287 ... P13995 39591507
    997234 9isc:B (2.54) BS01 NAD N/A GO:0000287 ... P13995 39591507
    997235 9isc:B (2.54) BS02 A1L22 N/A GO:0000287 ... P13995 39591507
    997236 9isd:A (2.367) BS01 ZN N/A GO:0016603 ... Q16769 40050649
    997237 9isd:A (2.367) BS02 A1D93 N/A GO:0016603 ... Q16769 40050649
    997238 9isd:B (2.367) BS01 ZN N/A GO:0016603 ... Q16769 40050649
    997239 9isd:B (2.367) BS02 A1D93 N/A GO:0016603 ... Q16769 40050649
    997240 9isd:C (2.367) BS01 ZN N/A GO:0016603 ... Q16769 40050649
    997241 9isd:C (2.367) BS02 A1D93 N/A GO:0016603 ... Q16769 40050649
    997242 9isd:D (2.367) BS01 ZN N/A GO:0016603 ... Q16769 40050649
    997243 9isd:D (2.367) BS02 A1D93 N/A GO:0016603 ... Q16769 40050649
    997244 9isd:E (2.367) BS01 ZN N/A GO:0016603 ... Q16769 40050649
    997245 9isd:E (2.367) BS02 A1D93 N/A GO:0016603 ... Q16769 40050649
    997246 9isd:F (2.367) BS01 ZN N/A GO:0016603 ... Q16769 40050649
    997247 9isd:F (2.367) BS02 A1D93 N/A GO:0016603 ... Q16769 40050649
    997248 9isd:G (2.367) BS01 ZN N/A GO:0016603 ... Q16769 40050649
    997249 9isd:G (2.367) BS02 A1D93 N/A GO:0016603 ... Q16769 40050649
    997250 9isd:H (2.367) BS01 ZN N/A GO:0016603 ... Q16769 40050649
    997251 9isd:H (2.367) BS02 A1D93 N/A GO:0016603 ... Q16769 40050649
    997252 9isd:I (2.367) BS01 ZN N/A GO:0016603 ... Q16769 40050649
    997253 9isd:I (2.367) BS02 A1D93 N/A GO:0016603 ... Q16769 40050649
    997254 9isd:J (2.367) BS01 ZN N/A GO:0016603 ... Q16769 40050649
    997255 9isd:J (2.367) BS02 A1D93 N/A GO:0016603 ... Q16769 40050649
    997256 9isd:K (2.367) BS01 ZN N/A GO:0016603 ... Q16769 40050649
    997257 9isd:K (2.367) BS02 A1D93 N/A GO:0016603 ... Q16769 40050649
    997258 9isd:L (2.367) BS01 ZN N/A GO:0016603 ... Q16769 40050649
    997259 9isd:L (2.367) BS02 A1D93 N/A GO:0016603 ... Q16769 40050649
    997260 9ise:A (1.99) BS01 NAP N/A GO:0003824 ... P11586 39591507
    997261 9ise:A (1.99) BS02 9L9 N/A GO:0003824 ... P11586 39591507
    997262 9ise:B (1.99) BS01 NAP N/A GO:0003824 ... P11586 39591507
    997263 9ise:B (1.99) BS02 9L9 N/A GO:0003824 ... P11586 39591507
    997264 9ise:C (1.99) BS01 NAP N/A GO:0003824 ... P11586 39591507
    997265 9ise:C (1.99) BS02 9L9 N/A GO:0003824 ... P11586 39591507
    997266 9ise:D (1.99) BS01 NAP N/A GO:0003824 ... P11586 39591507
    997267 9ise:D (1.99) BS02 9L9 N/A GO:0003824 ... P11586 39591507
    997268 9isg:A (3.5) BS01 A1D92 N/A GO:0001774 ... O35433 40702302
    997269 9isg:A (3.5) BS02 A1D92 N/A GO:0001774 ... O35433 40702302
    997270 9isg:B (3.5) BS01 A1D92 N/A GO:0001774 ... O35433 40702302
    997271 9isg:B (3.5) BS02 A1D92 N/A GO:0001774 ... O35433 40702302
    997272 9isg:C (3.5) BS01 A1D92 N/A GO:0001774 ... O35433 40702302
    997273 9isg:C (3.5) BS02 A1D92 N/A GO:0001774 ... O35433 40702302
    997274 9isg:D (3.5) BS01 A1D92 N/A GO:0001774 ... O35433 40702302
    997275 9isg:D (3.5) BS02 A1D92 N/A GO:0001774 ... O35433 40702302
    997276 9isk:A (2.73) BS01 G2P N/A GO:0003924 ... A6T4N8 40593603
    997277 9isk:B (2.73) BS01 G2P N/A GO:0003924 ... A6T4N8 40593603
    997278 9isk:C (2.73) BS01 G2P N/A GO:0003924 ... A6T4N8 40593603
    997279 9isk:D (2.73) BS01 G2P N/A GO:0003924 ... A6T4N8 40593603
    997280 9isk:E (2.73) BS01 G2P N/A GO:0003924 ... A6T4N8 40593603
    997281 9isk:F (2.73) BS01 G2P N/A GO:0003924 ... A6T4N8 40593603
    997282 9isk:G (2.73) BS01 peptide N/A GO:0000917 ... B5XUC8 40593603
    997283 9isk:G (2.73) BS02 peptide N/A GO:0000917 ... B5XUC8 40593603
    997284 9isk:H (2.73) BS01 peptide N/A GO:0000917 ... B5XUC8 40593603
    997285 9isk:H (2.73) BS02 peptide N/A GO:0000917 ... B5XUC8 40593603
    997286 9isk:K (2.73) BS01 peptide N/A GO:0000917 ... B5XUC8 40593603
    997287 9isk:K (2.73) BS02 peptide N/A GO:0000917 ... B5XUC8 40593603
    997288 9isk:L (2.73) BS01 peptide N/A GO:0000917 ... B5XUC8 40593603
    997289 9isk:L (2.73) BS02 peptide N/A GO:0000917 ... B5XUC8 40593603
    997290 9isl:A (2.06) BS01 A1L23 N/A GO:0003824 ... P11586 39591507
    997291 9isl:A (2.06) BS02 NAP N/A GO:0003824 ... P11586 39591507
    997292 9isl:B (2.06) BS01 A1L23 N/A GO:0003824 ... P11586 39591507
    997293 9isl:B (2.06) BS02 NAP N/A GO:0003824 ... P11586 39591507
    997294 9isl:C (2.06) BS01 A1L23 N/A GO:0003824 ... P11586 39591507
    997295 9isl:C (2.06) BS02 NAP N/A GO:0003824 ... P11586 39591507
    997296 9isl:D (2.06) BS01 A1L23 N/A GO:0003824 ... P11586 39591507
    997297 9isl:D (2.06) BS02 NAP N/A GO:0003824 ... P11586 39591507
    997298 9isn:C (2.97) BS01 dna N/A GO:0000345 ... Q9L0L0 40272361
    997299 9isn:C (2.97) BS02 dna N/A GO:0000345 ... Q9L0L0 40272361
    997300 9isn:D (2.97) BS01 dna N/A GO:0000287 ... Q8CJT1 40272361
    997301 9isn:D (2.97) BS02 dna N/A GO:0000287 ... Q8CJT1 40272361
    997302 9isn:D (2.97) BS03 MG N/A GO:0000287 ... Q8CJT1 40272361
    997303 9isn:D (2.97) BS04 ZN N/A GO:0000287 ... Q8CJT1 40272361
    997304 9isn:D (2.97) BS05 ZN N/A GO:0000287 ... Q8CJT1 40272361
    997305 9isn:F (2.97) BS01 dna N/A GO:0003700 ... Q9L0I8 40272361
    997306 9isn:F (2.97) BS02 dna N/A GO:0003700 ... Q9L0I8 40272361
    997307 9iso:A (2.81) BS01 PQQ N/A GO:0005509 ... P16027 40683858
    997308 9iso:B (2.81) BS01 PQQ N/A GO:0005509 ... P16027 40683858
    997309 9isr:A (2.5) BS01 A1L24 N/A GO:0003824 ... P11586 39591507
    997310 9isr:A (2.5) BS02 NAP N/A GO:0003824 ... P11586 39591507
    997311 9isr:B (2.5) BS01 A1L24 N/A GO:0003824 ... P11586 39591507
    997312 9isr:B (2.5) BS02 NAP N/A GO:0003824 ... P11586 39591507
    997313 9isr:C (2.5) BS01 A1L24 N/A GO:0003824 ... P11586 39591507
    997314 9isr:C (2.5) BS02 NAP N/A GO:0003824 ... P11586 39591507
    997315 9isr:D (2.5) BS01 A1L24 N/A GO:0003824 ... P11586 39591507
    997316 9isr:D (2.5) BS02 NAP N/A GO:0003824 ... P11586 39591507
    997317 9iss:A (1.46) BS01 HEM N/A GO:0004497 ... P14779 N/A
    997318 9iss:A (1.46) BS02 HL0 N/A GO:0004497 ... P14779 N/A
    997319 9iss:B (1.46) BS01 HEM N/A GO:0004497 ... P14779 N/A
    997320 9iss:B (1.46) BS02 HL0 N/A GO:0004497 ... P14779 N/A
    997321 9ist:A (2.27) BS01 HEM N/A GO:0004497 ... P14779 N/A
    997322 9ist:A (2.27) BS02 HL0 N/A GO:0004497 ... P14779 N/A
    997323 9ist:B (2.27) BS01 HEM N/A GO:0004497 ... P14779 N/A
    997324 9ist:B (2.27) BS02 HL0 N/A GO:0004497 ... P14779 N/A
    997325 9isu:A (1.32) BS01 HEM N/A GO:0004497 ... P14779 N/A
    997326 9isu:A (1.32) BS02 HL0 N/A GO:0004497 ... P14779 N/A
    997327 9isu:B (1.32) BS01 HEM N/A GO:0004497 ... P14779 N/A
    997328 9isu:B (1.32) BS02 HL0 N/A GO:0004497 ... P14779 N/A
    997329 9isz:A (2.6) BS01 peptide N/A GO:0005634 ... O60016 40446033
    997330 9isz:A (2.6) BS02 SAM N/A GO:0005634 ... O60016 40446033
    997331 9isz:A (2.6) BS03 ZN N/A GO:0005634 ... O60016 40446033
    997332 9isz:A (2.6) BS04 ZN N/A GO:0005634 ... O60016 40446033
    997333 9isz:A (2.6) BS05 ZN N/A GO:0005634 ... O60016 40446033
    997334 9isz:A (2.6) BS06 ZN N/A GO:0005634 ... O60016 40446033
    997335 9isz:B (2.6) BS01 peptide N/A GO:0005634 ... O60016 40446033
    997336 9isz:B (2.6) BS02 SAM N/A GO:0005634 ... O60016 40446033
    997337 9isz:B (2.6) BS03 ZN N/A GO:0005634 ... O60016 40446033
    997338 9isz:B (2.6) BS04 ZN N/A GO:0005634 ... O60016 40446033
    997339 9isz:B (2.6) BS05 ZN N/A GO:0005634 ... O60016 40446033
    997340 9isz:B (2.6) BS06 ZN N/A GO:0005634 ... O60016 40446033
    997341 9it0:A (1.99) BS01 ACO N/A GO:0003824 ... P76594 40498448
    997342 9it0:A (1.99) BS02 ACO N/A GO:0003824 ... P76594 40498448
    997343 9it0:B (1.99) BS01 ACO N/A GO:0003824 ... P76594 40498448
    997344 9it0:B (1.99) BS02 ACO N/A GO:0003824 ... P76594 40498448
    997345 9it0:C (1.99) BS01 ACO N/A GO:0003824 ... P76594 40498448
    997346 9it0:C (1.99) BS02 ACO N/A GO:0003824 ... P76594 40498448
    997347 9it0:D (1.99) BS01 ACO N/A GO:0003824 ... P76594 40498448
    997348 9it0:D (1.99) BS02 ACO N/A GO:0003824 ... P76594 40498448
    997349 9it2:C (2.03) BS01 NI N/A GO:0005737 ... P0C7K7 40752870
    997350 9it2:C (2.03) BS02 NI N/A GO:0005737 ... P0C7K7 40752870
    997351 9it2:F (2.03) BS01 NI N/A GO:0005737 ... P0C7K7 40752870
    997352 9it2:F (2.03) BS02 NI N/A GO:0005737 ... P0C7K7 40752870
    997353 9it2:I (2.03) BS01 NI N/A GO:0005737 ... P0C7K7 40752870
    997354 9it2:I (2.03) BS02 NI N/A GO:0005737 ... P0C7K7 40752870
    997355 9it3:A (2.06) BS01 A1L23 N/A GO:0000287 ... P13995 39591507
    997356 9it3:A (2.06) BS02 NAD N/A GO:0000287 ... P13995 39591507
    997357 9it3:B (2.06) BS01 A1L23 N/A GO:0000287 ... P13995 39591507
    997358 9it3:B (2.06) BS02 NAD N/A GO:0000287 ... P13995 39591507
    997359 9it4:B (2.39) BS01 peptide N/A GO:0005634 ... O60016 40446033
    997360 9it4:B (2.39) BS02 SAM N/A GO:0005634 ... O60016 40446033
    997361 9it4:B (2.39) BS03 ZN N/A GO:0005634 ... O60016 40446033
    997362 9it4:B (2.39) BS04 ZN N/A GO:0005634 ... O60016 40446033
    997363 9it4:B (2.39) BS05 ZN N/A GO:0005634 ... O60016 40446033
    997364 9it4:B (2.39) BS06 ZN N/A GO:0005634 ... O60016 40446033
    997365 9it5:A (2.0) BS01 A1L3B N/A GO:0004402 ... Q09472 41248492
    997366 9it5:B (2.0) BS01 A1L3B N/A GO:0004402 ... Q09472 41248492
    997367 9it6:A (2.04) BS01 A1L24 N/A GO:0000287 ... P13995 39591507
    997368 9it6:A (2.04) BS02 NAD N/A GO:0000287 ... P13995 39591507
    997369 9it6:B (2.04) BS01 A1L24 N/A GO:0000287 ... P13995 39591507
    997370 9it6:B (2.04) BS02 NAD N/A GO:0000287 ... P13995 39591507
    997371 9it8:A (1.954) BS01 NO N/A GO:0004601 ... P80025 39748619
    997372 9it8:A (1.954) BS02 NO2 N/A GO:0004601 ... P80025 39748619
    997373 9it8:A (1.954) BS03 HEM N/A GO:0004601 ... P80025 39748619
    997374 9it8:A (1.954) BS04 CA N/A GO:0004601 ... P80025 39748619
    997375 9it8:A (1.954) BS05 OSM N/A GO:0004601 ... P80025 39748619
    997376 9ita:A (2.35) BS01 A1L25 N/A GO:0000287 ... P13995 39591507
    997377 9ita:A (2.35) BS02 NAD N/A GO:0000287 ... P13995 39591507
    997378 9ita:B (2.35) BS01 A1L25 N/A GO:0000287 ... P13995 39591507
    997379 9ita:B (2.35) BS02 NAD N/A GO:0000287 ... P13995 39591507
    997380 9itb:R (2.89) BS01 NKP N/A GO:0004930 ... P43657 39847322
    997381 9itb:R (2.89) BS02 CLR N/A GO:0004930 ... P43657 39847322
    997382 9itd:A (2.28) BS01 NAP N/A GO:0003824 ... P11586 39591507
    997383 9itd:A (2.28) BS02 A1L22 N/A GO:0003824 ... P11586 39591507
    997384 9itd:B (2.28) BS01 NAP N/A GO:0003824 ... P11586 39591507
    997385 9itd:B (2.28) BS02 A1L22 N/A GO:0003824 ... P11586 39591507
    997386 9itd:C (2.28) BS01 NAP N/A GO:0003824 ... P11586 39591507
    997387 9itd:C (2.28) BS02 A1L22 N/A GO:0003824 ... P11586 39591507
    997388 9itd:D (2.28) BS01 NAP N/A GO:0003824 ... P11586 39591507
    997389 9itd:D (2.28) BS02 A1L22 N/A GO:0003824 ... P11586 39591507
    997390 9ite:R (3.06) BS01 NKP N/A GO:0004930 ... P43657 39847322
    997391 9ite:R (3.06) BS02 CLR N/A GO:0004930 ... P43657 39847322
    997392 9ite:R (3.06) BS03 CLR N/A GO:0004930 ... P43657 39847322
    997393 9itf:A (2.9) BS01 O6E N/A GO:0000155 ... P14713 40404641
    997394 9itf:C (2.9) BS01 O6E N/A GO:0000155 ... P14713 40404641
    997395 9itg:A (3.03) BS01 PO4 N/A GO:0000822 ... Q9UBH6 40128258
    997396 9itg:A (3.03) BS02 IHP N/A GO:0000822 ... Q9UBH6 40128258
    997397 9itg:A (3.03) BS03 CLR N/A GO:0000822 ... Q9UBH6 40128258
    997398 9itg:A (3.03) BS04 Y01 N/A GO:0000822 ... Q9UBH6 40128258
    997399 9itg:A (3.03) BS05 1T9 N/A GO:0000822 ... Q9UBH6 40128258
    997400 9itg:B (3.03) BS01 PO4 N/A GO:0000822 ... Q9UBH6 40128258

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).