SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    99601 2p5b:B (1.99) BS04 FE2 1.14.11.66
    1.14.11.69
    N/A O75164 17567753
    99602 2p5b:B (1.99) BS05 OGA 1.14.11.66
    1.14.11.69
    N/A O75164 17567753 BindingDB: IC50=250000nM
    99603 2p5b:B (1.99) BS06 OXY 1.14.11.66
    1.14.11.69
    N/A O75164 17567753
    99604 2p5c:A (2.4) BS01 SAH 2.1.1.98 GO:0004164 ... O58456 N/A
    99605 2p5e:A (1.89) BS01 peptide ? N/A P04439 17644531
    99606 2p5e:B (1.89) BS01 MG ? GO:0000139 ... P61769 17644531
    99607 2p5e:D (1.89) BS01 peptide ? N/A P01848 17644531
    99608 2p5e:E (1.89) BS01 peptide N/A N/A N/A 17644531
    99609 2p5f:A (2.5) BS01 SAH 2.1.1.98 GO:0004164 ... O58456 N/A
    99610 2p5g:A (2.8) BS01 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 17718515
    99611 2p5g:A (2.8) BS02 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 17718515
    99612 2p5g:A (2.8) BS03 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 17718515
    99613 2p5g:A (2.8) BS04 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 17718515
    99614 2p5g:B (2.8) BS01 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 17718515
    99615 2p5g:C (2.8) BS01 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 17718515
    99616 2p5g:C (2.8) BS02 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 17718515
    99617 2p5g:D (2.8) BS01 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 17718515
    99618 2p5g:D (2.8) BS02 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 17718515
    99619 2p5l:C (2.85) BS01 dna ? GO:0003700 ... P17893 18455186
    99620 2p5l:C (2.85) BS02 dna ? GO:0003700 ... P17893 18455186
    99621 2p5l:D (2.85) BS01 dna ? GO:0003700 ... P17893 18455186
    99622 2p5l:D (2.85) BS02 dna ? GO:0003700 ... P17893 18455186
    99623 2p5l:G (2.85) BS01 dna ? GO:0003700 ... P17893 18455186
    99624 2p5l:G (2.85) BS02 dna ? GO:0003700 ... P17893 18455186
    99625 2p5l:H (2.85) BS01 dna ? GO:0003700 ... P17893 18455186
    99626 2p5l:H (2.85) BS02 dna ? GO:0003700 ... P17893 18455186
    99627 2p5m:A (1.95) BS01 ARG ? GO:0003700 ... P17893 18007040
    99628 2p5m:A (1.95) BS02 ARG ? GO:0003700 ... P17893 18007040
    99629 2p5m:B (1.95) BS01 ARG ? GO:0003700 ... P17893 18007040
    99630 2p5m:B (1.95) BS02 ARG ? GO:0003700 ... P17893 18007040
    99631 2p5m:C (1.95) BS01 ARG ? GO:0003700 ... P17893 18007040
    99632 2p5m:C (1.95) BS02 ARG ? GO:0003700 ... P17893 18007040
    99633 2p5n:A (1.8) BS01 NDP 1.1.1.-
    1.1.1.209
    GO:0001758 ... Q91WR5 17909281
    99634 2p5n:B (1.8) BS01 NDP 1.1.1.-
    1.1.1.209
    GO:0001758 ... Q91WR5 17909281
    99635 2p5o:A (2.8) BS01 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 15057283
    99636 2p5o:A (2.8) BS02 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 15057283
    99637 2p5o:A (2.8) BS03 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 15057283
    99638 2p5o:B (2.8) BS01 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 15057283
    99639 2p5o:C (2.8) BS01 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 15057283
    99640 2p5o:C (2.8) BS02 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 15057283
    99641 2p5r:A (2.45) BS01 CA 1.11.1.- GO:0004601 ... A3FNZ8 17531267
    99642 2p5r:A (2.45) BS02 CA 1.11.1.- GO:0004601 ... A3FNZ8 17531267
    99643 2p5s:A (2.15) BS01 GDP ? GO:0003924 ... Q8IZ41 N/A
    99644 2p5s:B (2.15) BS01 GDP ? GO:0003924 ... Q8IZ41 N/A
    99645 2p5u:A (2.37) BS01 NAD 5.1.3.2 N/A Q5SKQ2 N/A
    99646 2p5u:B (2.37) BS01 NAD 5.1.3.2 N/A Q5SKQ2 N/A
    99647 2p5u:C (2.37) BS01 NAD 5.1.3.2 N/A Q5SKQ2 N/A
    99648 2p5u:D (2.37) BS01 NAD 5.1.3.2 N/A Q5SKQ2 N/A
    99649 2p5v:A (1.99) BS01 CA ? GO:0043565 ... Q9K0L9 17374605
    99650 2p5v:B (1.99) BS01 CA ? GO:0043565 ... Q9K0L9 17374605
    99651 2p5v:C (1.99) BS01 CA ? GO:0043565 ... Q9K0L9 17374605
    99652 2p5v:D (1.99) BS01 CA ? GO:0043565 ... Q9K0L9 17374605
    99653 2p5v:E (1.99) BS01 CA ? GO:0043565 ... Q9K0L9 17374605
    99654 2p5v:F (1.99) BS01 CA ? GO:0043565 ... Q9K0L9 17374605
    99655 2p5v:G (1.99) BS01 CA ? GO:0043565 ... Q9K0L9 17374605
    99656 2p5v:H (1.99) BS01 CA ? GO:0043565 ... Q9K0L9 17374605
    99657 2p5w:A (2.2) BS01 peptide ? N/A P04439 17644531
    99658 2p5w:B (2.2) BS01 CA ? GO:0000139 ... P61769 17644531
    99659 2p5w:B (2.2) BS02 MG ? GO:0000139 ... P61769 17644531
    99660 2p5w:D (2.2) BS01 peptide ? N/A P01848 17644531
    99661 2p5w:E (2.2) BS01 peptide N/A N/A N/A 17644531
    99662 2p5y:A (1.92) BS01 NAD 5.1.3.2 N/A Q5SKQ2 N/A
    99663 2p66:A (2.5) BS01 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 16172026
    99664 2p66:A (2.5) BS02 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 16172026
    99665 2p66:A (2.5) BS03 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 16172026
    99666 2p66:A (2.5) BS04 PO4 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 16172026
    99667 2p69:A (2.25) BS01 CA 3.1.3.16
    3.1.3.74
    GO:0000287 ... Q96GD0 18058037
    99668 2p69:A (2.25) BS02 PLP 3.1.3.16
    3.1.3.74
    GO:0000287 ... Q96GD0 18058037
    99669 2p6a:C (3.4) BS01 peptide ? GO:0000122 ... P19883 17409095
    99670 2p6b:A (2.3) BS01 peptide 3.1.3.16 GO:0016787 ... Q08209 17498738
    99671 2p6b:A (2.3) BS02 ZN 3.1.3.16 GO:0016787 ... Q08209 17498738
    99672 2p6b:A (2.3) BS03 FE 3.1.3.16 GO:0016787 ... Q08209 17498738
    99673 2p6b:B (2.3) BS01 CA ? GO:0004721 ... P63098 17498738
    99674 2p6b:B (2.3) BS02 CA ? GO:0004721 ... P63098 17498738
    99675 2p6b:B (2.3) BS03 CA ? GO:0004721 ... P63098 17498738
    99676 2p6b:B (2.3) BS04 CA ? GO:0004721 ... P63098 17498738
    99677 2p6b:C (2.3) BS01 peptide 3.1.3.16 GO:0016787 ... Q08209 17498738
    99678 2p6b:C (2.3) BS02 ZN 3.1.3.16 GO:0016787 ... Q08209 17498738
    99679 2p6b:C (2.3) BS03 FE 3.1.3.16 GO:0016787 ... Q08209 17498738
    99680 2p6b:D (2.3) BS01 CA ? GO:0004721 ... P63098 17498738
    99681 2p6b:D (2.3) BS02 CA ? GO:0004721 ... P63098 17498738
    99682 2p6b:D (2.3) BS03 CA ? GO:0004721 ... P63098 17498738
    99683 2p6b:D (2.3) BS04 CA ? GO:0004721 ... P63098 17498738
    99684 2p6d:A (2.4) BS01 SAH 2.1.1.98 GO:0004164 ... O58456 N/A
    99685 2p6e:A (2.9) BS01 MYA 2.3.1.97 GO:0004379 ... P14743 17513302
    99686 2p6e:B (2.9) BS01 MYA 2.3.1.97 GO:0004379 ... P14743 17513302
    99687 2p6e:C (2.9) BS01 MYA 2.3.1.97 GO:0004379 ... P14743 17513302
    99688 2p6e:D (2.9) BS01 MYA 2.3.1.97 GO:0004379 ... P14743 17513302
    99689 2p6e:E (2.9) BS01 MYA 2.3.1.97 GO:0004379 ... P14743 17513302
    99690 2p6e:F (2.9) BS01 MYA 2.3.1.97 GO:0004379 ... P14743 17513302
    99691 2p6f:A (3.1) BS01 MYA 2.3.1.97 GO:0004379 ... P14743 17513302
    99692 2p6f:A (3.1) BS02 GN8 2.3.1.97 GO:0004379 ... P14743 17513302
    99693 2p6f:B (3.1) BS01 MYA 2.3.1.97 GO:0004379 ... P14743 17513302
    99694 2p6f:B (3.1) BS02 GN8 2.3.1.97 GO:0004379 ... P14743 17513302
    99695 2p6f:C (3.1) BS01 MYA 2.3.1.97 GO:0004379 ... P14743 17513302
    99696 2p6f:C (3.1) BS02 GN8 2.3.1.97 GO:0004379 ... P14743 17513302
    99697 2p6f:D (3.1) BS01 MYA 2.3.1.97 GO:0004379 ... P14743 17513302
    99698 2p6f:D (3.1) BS02 GN8 2.3.1.97 GO:0004379 ... P14743 17513302
    99699 2p6f:E (3.1) BS01 MYA 2.3.1.97 GO:0004379 ... P14743 17513302
    99700 2p6f:E (3.1) BS02 GN8 2.3.1.97 GO:0004379 ... P14743 17513302
    99701 2p6f:F (3.1) BS01 MYA 2.3.1.97 GO:0004379 ... P14743 17513302
    99702 2p6f:F (3.1) BS02 GN8 2.3.1.97 GO:0004379 ... P14743 17513302
    99703 2p6g:A (3.0) BS01 MYA 2.3.1.97 GO:0004379 ... P14743 17513302
    99704 2p6g:B (3.0) BS01 MYA 2.3.1.97 GO:0004379 ... P14743 17513302
    99705 2p6g:C (3.0) BS01 MYA 2.3.1.97 GO:0004379 ... P14743 17513302
    99706 2p6g:C (3.0) BS02 3LP 2.3.1.97 GO:0004379 ... P14743 17513302
    99707 2p6g:D (3.0) BS01 MYA 2.3.1.97 GO:0004379 ... P14743 17513302
    99708 2p6g:E (3.0) BS01 MYA 2.3.1.97 GO:0004379 ... P14743 17513302
    99709 2p6g:F (3.0) BS01 MYA 2.3.1.97 GO:0004379 ... P14743 17513302
    99710 2p6g:F (3.0) BS02 3LP 2.3.1.97 GO:0004379 ... P14743 17513302
    99711 2p6i:A (2.2) BS01 SAH 2.1.1.98 GO:0004164 ... O58456 N/A
    99712 2p6k:A (2.1) BS01 SAH 2.1.1.98 GO:0004164 ... O58456 N/A
    99713 2p6l:A (2.0) BS01 SAH 2.1.1.98 GO:0004164 ... O58456 N/A
    99714 2p6r:A (3.0) BS01 dna N/A GO:0003676 ... P0DMI1 17558417
    99715 2p6r:A (3.0) BS02 dna N/A GO:0003676 ... P0DMI1 17558417
    99716 2p6s:A (2.8) BS01 MET ? GO:0043565 ... Q9K0L9 17374605
    99717 2p6s:A (2.8) BS02 MET ? GO:0043565 ... Q9K0L9 17374605
    99718 2p6s:B (2.8) BS01 CA ? GO:0043565 ... Q9K0L9 17374605
    99719 2p6s:B (2.8) BS02 CA ? GO:0043565 ... Q9K0L9 17374605
    99720 2p6s:B (2.8) BS03 MET ? GO:0043565 ... Q9K0L9 17374605
    99721 2p6s:B (2.8) BS04 MET ? GO:0043565 ... Q9K0L9 17374605
    99722 2p6s:C (2.8) BS01 MET ? GO:0043565 ... Q9K0L9 17374605
    99723 2p6s:C (2.8) BS02 MET ? GO:0043565 ... Q9K0L9 17374605
    99724 2p6s:D (2.8) BS01 MET ? GO:0043565 ... Q9K0L9 17374605
    99725 2p6s:D (2.8) BS02 MET ? GO:0043565 ... Q9K0L9 17374605
    99726 2p6s:E (2.8) BS01 MET ? GO:0043565 ... Q9K0L9 17374605
    99727 2p6s:E (2.8) BS02 MET ? GO:0043565 ... Q9K0L9 17374605
    99728 2p6s:F (2.8) BS01 MET ? GO:0043565 ... Q9K0L9 17374605
    99729 2p6s:F (2.8) BS02 MET ? GO:0043565 ... Q9K0L9 17374605
    99730 2p6s:G (2.8) BS01 MET ? GO:0043565 ... Q9K0L9 17374605
    99731 2p6s:G (2.8) BS02 MET ? GO:0043565 ... Q9K0L9 17374605
    99732 2p6s:H (2.8) BS01 MET ? GO:0043565 ... Q9K0L9 17374605
    99733 2p6s:H (2.8) BS02 MET ? GO:0043565 ... Q9K0L9 17374605
    99734 2p6t:A (2.9) BS01 LEU ? GO:0043565 ... Q9K0L9 17374605
    99735 2p6t:A (2.9) BS02 LEU ? GO:0043565 ... Q9K0L9 17374605
    99736 2p6t:B (2.9) BS01 CA ? GO:0043565 ... Q9K0L9 17374605
    99737 2p6t:B (2.9) BS02 LEU ? GO:0043565 ... Q9K0L9 17374605
    99738 2p6t:B (2.9) BS03 LEU ? GO:0043565 ... Q9K0L9 17374605
    99739 2p6t:C (2.9) BS01 LEU ? GO:0043565 ... Q9K0L9 17374605
    99740 2p6t:C (2.9) BS02 LEU ? GO:0043565 ... Q9K0L9 17374605
    99741 2p6t:D (2.9) BS01 LEU ? GO:0043565 ... Q9K0L9 17374605
    99742 2p6t:D (2.9) BS02 LEU ? GO:0043565 ... Q9K0L9 17374605
    99743 2p6t:E (2.9) BS01 LEU ? GO:0043565 ... Q9K0L9 17374605
    99744 2p6t:E (2.9) BS02 LEU ? GO:0043565 ... Q9K0L9 17374605
    99745 2p6t:F (2.9) BS01 LEU ? GO:0043565 ... Q9K0L9 17374605
    99746 2p6t:F (2.9) BS02 LEU ? GO:0043565 ... Q9K0L9 17374605
    99747 2p6t:F (2.9) BS03 CA ? GO:0043565 ... Q9K0L9 17374605
    99748 2p6t:G (2.9) BS01 LEU ? GO:0043565 ... Q9K0L9 17374605
    99749 2p6t:G (2.9) BS02 LEU ? GO:0043565 ... Q9K0L9 17374605
    99750 2p6t:H (2.9) BS01 LEU ? GO:0043565 ... Q9K0L9 17374605
    99751 2p6t:H (2.9) BS02 LEU ? GO:0043565 ... Q9K0L9 17374605
    99752 2p6w:A (1.6) BS01 MN ? GO:0016020 ... Q89399 17850743
    99753 2p6y:A (1.63) BS01 ZN ? N/A Q9KM02 N/A
    99754 2p70:A (2.1) BS01 PRZ ? GO:0005549 ... P34174 17850754
    99755 2p70:A (2.1) BS02 PRZ ? GO:0005549 ... P34174 17850754
    99756 2p71:A (2.006) BS01 IHD ? GO:0005549 ... P34174 17850754
    99757 2p72:A (2.0) BS01 MN ? GO:0016020 ... Q89399 17850743
    99758 2p72:B (2.0) BS01 MN ? GO:0016020 ... Q89399 17850743
    99759 2p72:B (2.0) BS02 UPG ? GO:0016020 ... Q89399 17850743
    99760 2p73:A (2.3) BS01 MN ? GO:0016020 ... Q89399 17850743
    99761 2p73:A (2.3) BS02 UDP ? GO:0016020 ... Q89399 17850743
    99762 2p7a:A (2.3) BS01 43M ? N/A P62508 17964775 MOAD: Kd=0.788uM
    99763 2p7c:B (-1.00) BS01 dna ? GO:0003677 ... P06555 17576674
    99764 2p7c:B (-1.00) BS02 dna ? GO:0003677 ... P06555 17576674
    99765 2p7g:A (2.1) BS01 2OH ? N/A P62508 17964775 MOAD: Kd=0.297uM
    BindingDB: IC50=13.1nM
    99766 2p7o:A (1.44) BS01 MN ? GO:0005737 ... Q8Y6I2 17567049
    99767 2p7o:B (1.44) BS01 MN ? GO:0005737 ... Q8Y6I2 17567049
    99768 2p7p:A (2.17) BS01 MN ? GO:0005737 ... Q8Y6I2 17567049
    99769 2p7p:B (2.17) BS01 MN ? GO:0005737 ... Q8Y6I2 17567049
    99770 2p7p:C (2.17) BS01 MN ? GO:0005737 ... Q8Y6I2 17567049
    99771 2p7p:D (2.17) BS01 MN ? GO:0005737 ... Q8Y6I2 17567049
    99772 2p7p:E (2.17) BS01 MN ? GO:0005737 ... Q8Y6I2 17567049
    99773 2p7p:F (2.17) BS01 MN ? GO:0005737 ... Q8Y6I2 17567049
    99774 2p7q:A (2.4) BS01 MN N/A N/A N/A 17567049
    99775 2p7q:A (2.4) BS02 GG6 N/A N/A N/A 17567049
    99776 2p7q:A (2.4) BS03 GG6 N/A N/A N/A 17567049
    99777 2p7q:B (2.4) BS01 GG6 N/A N/A N/A 17567049
    99778 2p7q:B (2.4) BS02 MN N/A N/A N/A 17567049
    99779 2p7q:B (2.4) BS03 GG6 N/A N/A N/A 17567049
    99780 2p7q:C (2.4) BS01 MN N/A N/A N/A 17567049
    99781 2p7q:C (2.4) BS02 GG6 N/A N/A N/A 17567049
    99782 2p7q:D (2.4) BS01 MN N/A N/A N/A 17567049
    99783 2p7q:D (2.4) BS02 GG6 N/A N/A N/A 17567049
    99784 2p7q:E (2.4) BS01 MN N/A N/A N/A 17567049
    99785 2p7q:E (2.4) BS02 GG6 N/A N/A N/A 17567049
    99786 2p7q:F (2.4) BS01 MN N/A N/A N/A 17567049
    99787 2p7q:F (2.4) BS02 GG6 N/A N/A N/A 17567049
    99788 2p7u:A (1.65) BS01 D1R ? GO:0006508 ... Q95PM0 19620707
    99789 2p7v:B (2.6) BS01 MG ? GO:0003700 ... Q0P6L9 17681541
    99790 2p7z:A (2.5) BS01 OHT ? N/A P62508 17964775 MOAD: Kd=0.262uM
    BindingDB: IC50=1350nM, EC50=15nM
    99791 2p80:A (-1.00) BS01 CU 1.7.2.1 GO:0005507 ... P38501 N/A
    99792 2p80:A (-1.00) BS02 CU 1.7.2.1 GO:0005507 ... P38501 N/A
    99793 2p80:B (-1.00) BS01 CU 1.7.2.1 GO:0005507 ... P38501 N/A
    99794 2p80:B (-1.00) BS02 CU 1.7.2.1 GO:0005507 ... P38501 N/A
    99795 2p80:C (-1.00) BS01 CU 1.7.2.1 GO:0005507 ... P38501 N/A
    99796 2p80:C (-1.00) BS02 CU 1.7.2.1 GO:0005507 ... P38501 N/A
    99797 2p80:D (-1.00) BS01 CU ? GO:0005507 ... P04377 N/A
    99798 2p83:A (2.5) BS01 MR0 3.4.23.46 GO:0004190 ... P56817 17434734 MOAD: ic50=11nM
    BindingDB: IC50=11nM
    99799 2p83:B (2.5) BS01 MR0 3.4.23.46 GO:0004190 ... P56817 17434734 MOAD: ic50=11nM
    BindingDB: IC50=11nM
    99800 2p83:C (2.5) BS01 MR0 3.4.23.46 GO:0004190 ... P56817 17434734 MOAD: ic50=11nM
    BindingDB: IC50=11nM

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).