SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    997801 9ix9:D (2.05) BS03 OXY N/A GO:0005507 ... A0AAJ6N646 N/A
    997802 9ixb:A (3.48) BS01 GTP N/A GO:0000226 ... Q2XVP4 N/A
    997803 9ixb:A (3.48) BS02 CA N/A GO:0000226 ... Q2XVP4 N/A
    997804 9ixb:A (3.48) BS03 A1ECQ N/A GO:0000226 ... Q2XVP4 N/A
    997805 9ixb:B (3.48) BS01 A1ECQ N/A GO:0003924 ... A0A480UE93 N/A
    997806 9ixb:B (3.48) BS02 GDP N/A GO:0003924 ... A0A480UE93 N/A
    997807 9ixb:C (3.48) BS01 GTP N/A GO:0000226 ... Q2XVP4 N/A
    997808 9ixb:D (3.48) BS01 GDP N/A GO:0003924 ... A0A480UE93 N/A
    997809 9ixb:F (3.48) BS01 ACP N/A GO:0036211 ... N/A N/A
    997810 9ixc:A (1.26) BS01 MN N/A GO:0004053 ... D2Z025 39563074
    997811 9ixc:A (1.26) BS02 MN N/A GO:0004053 ... D2Z025 39563074
    997812 9ixc:B (1.26) BS01 MN N/A GO:0004053 ... D2Z025 39563074
    997813 9ixc:B (1.26) BS02 MN N/A GO:0004053 ... D2Z025 39563074
    997814 9ixd:A (1.5) BS01 MN N/A GO:0004053 ... D2Z025 39563074
    997815 9ixd:A (1.5) BS02 MN N/A GO:0004053 ... D2Z025 39563074
    997816 9ixd:B (1.5) BS01 CU N/A GO:0004053 ... D2Z025 39563074
    997817 9ixd:B (1.5) BS02 CU1 N/A GO:0004053 ... D2Z025 39563074
    997818 9ixd:B (1.5) BS03 MG N/A GO:0004053 ... D2Z025 39563074
    997819 9ixe:A (1.58) BS01 MN N/A GO:0004053 ... D2Z025 39563074
    997820 9ixe:A (1.58) BS02 MN N/A GO:0004053 ... D2Z025 39563074
    997821 9ixe:B (1.58) BS01 CU1 N/A GO:0004053 ... D2Z025 39563074
    997822 9ixe:B (1.58) BS02 CU1 N/A GO:0004053 ... D2Z025 39563074
    997823 9ixe:B (1.58) BS03 CU1 N/A GO:0004053 ... D2Z025 39563074
    997824 9ixf:A (1.75) BS01 MN N/A GO:0004053 ... D2Z025 39563074
    997825 9ixf:A (1.75) BS02 MG N/A GO:0004053 ... D2Z025 39563074
    997826 9ixf:B (1.75) BS01 MG N/A GO:0004053 ... D2Z025 39563074
    997827 9ixf:B (1.75) BS02 MG N/A GO:0004053 ... D2Z025 39563074
    997828 9ixg:A (2.14) BS01 MN N/A GO:0004053 ... D2Z025 39563074
    997829 9ixg:A (2.14) BS02 MG N/A GO:0004053 ... D2Z025 39563074
    997830 9ixg:B (2.14) BS01 MG N/A GO:0004053 ... D2Z025 39563074
    997831 9ixg:B (2.14) BS02 MG N/A GO:0004053 ... D2Z025 39563074
    997832 9ixj:R (2.92) BS01 HSM N/A GO:0001696 ... P25021 N/A
    997833 9ixj:R (2.92) BS02 CLR N/A GO:0001696 ... P25021 N/A
    997834 9ixl:A (2.1) BS01 HEM N/A GO:0004497 ... A0A368UNN3 N/A
    997835 9ixl:B (2.1) BS01 HEM N/A GO:0004497 ... A0A368UNN3 N/A
    997836 9ixm:A (3.26) BS01 dna N/A N/A A0A5R8LS59 39448873
    997837 9ixm:B (3.26) BS01 dna N/A N/A N/A 39448873
    997838 9ixm:B (3.26) BS02 dna N/A N/A N/A 39448873
    997839 9ixm:B (3.26) BS03 dna N/A N/A N/A 39448873
    997840 9ixm:C (3.26) BS01 dna N/A N/A A0A5R8LS59 39448873
    997841 9ixm:C (3.26) BS02 dna N/A N/A A0A5R8LS59 39448873
    997842 9ixr:A (2.19) BS01 CTJ N/A GO:0005886 ... Q6QJ55 39361442
    997843 9ixr:B (2.19) BS01 CTJ N/A GO:0005886 ... Q6QJ55 39361442
    997844 9ixs:A (2.91) BS01 A1L3K N/A N/A Q99594 40168885
    997845 9ixs:B (2.91) BS01 A1L3K N/A N/A Q99594 40168885
    997846 9ixs:C (2.91) BS01 A1L3K N/A N/A Q99594 40168885
    997847 9ixt:A (2.5) BS01 A1L3M N/A N/A Q99594 40168885
    997848 9ixt:B (2.5) BS01 A1L3M N/A N/A Q99594 40168885
    997849 9ixt:C (2.5) BS01 A1L3M N/A N/A Q99594 40168885
    997850 9ixu:A (3.19) BS01 peptide N/A GO:0001783 ... Q07812 40570108
    997851 9ixu:A (3.19) BS02 peptide N/A GO:0001783 ... Q07812 40570108
    997852 9ixu:B (3.19) BS01 peptide N/A GO:0001783 ... Q07812 40570108
    997853 9ixu:C (3.19) BS01 peptide N/A GO:0001783 ... Q07812 40570108
    997854 9ixu:C (3.19) BS02 peptide N/A GO:0001783 ... Q07812 40570108
    997855 9ixu:D (3.19) BS01 peptide N/A GO:0001783 ... Q07812 40570108
    997856 9ixx:R (3.15) BS01 LTD N/A GO:0001631 ... Q9NS75 40193607
    997857 9ixy:A (3.1) BS01 A1L3C N/A GO:0005216 ... O43526 39814994
    997858 9ixy:A (3.1) BS02 PIO N/A GO:0005216 ... O43526 39814994
    997859 9ixy:A (3.1) BS03 A1L3C N/A GO:0005216 ... O43526 39814994
    997860 9ixy:A (3.1) BS04 PIO N/A GO:0005216 ... O43526 39814994
    997861 9ixy:B (3.1) BS01 A1L3C N/A GO:0005216 ... O43526 39814994
    997862 9ixy:B (3.1) BS02 PIO N/A GO:0005216 ... O43526 39814994
    997863 9ixy:B (3.1) BS03 A1L3C N/A GO:0005216 ... O43526 39814994
    997864 9ixy:B (3.1) BS04 PIO N/A GO:0005216 ... O43526 39814994
    997865 9ixy:C (3.1) BS01 A1L3C N/A GO:0005216 ... O43526 39814994
    997866 9ixy:C (3.1) BS02 PIO N/A GO:0005216 ... O43526 39814994
    997867 9ixy:C (3.1) BS03 A1L3C N/A GO:0005216 ... O43526 39814994
    997868 9ixy:C (3.1) BS04 PIO N/A GO:0005216 ... O43526 39814994
    997869 9ixy:D (3.1) BS01 A1L3C N/A GO:0005216 ... O43526 39814994
    997870 9ixy:D (3.1) BS02 PIO N/A GO:0005216 ... O43526 39814994
    997871 9ixy:D (3.1) BS03 A1L3C N/A GO:0005216 ... O43526 39814994
    997872 9ixy:D (3.1) BS04 PIO N/A GO:0005216 ... O43526 39814994
    997873 9ixz:A (3.2) BS01 A1L3D N/A GO:0005216 ... O43526 39814994
    997874 9ixz:A (3.2) BS02 A1L3D N/A GO:0005216 ... O43526 39814994
    997875 9ixz:B (3.2) BS01 A1L3D N/A GO:0005216 ... O43526 39814994
    997876 9ixz:B (3.2) BS02 A1L3D N/A GO:0005216 ... O43526 39814994
    997877 9ixz:C (3.2) BS01 A1L3D N/A GO:0005216 ... O43526 39814994
    997878 9ixz:C (3.2) BS02 A1L3D N/A GO:0005216 ... O43526 39814994
    997879 9ixz:D (3.2) BS01 A1L3D N/A GO:0005216 ... O43526 39814994
    997880 9ixz:D (3.2) BS02 A1L3D N/A GO:0005216 ... O43526 39814994
    997881 9iy0:H (1.97) BS01 MG N/A N/A N/A 39585981
    997882 9iy1:A (2.29) BS01 HEM N/A GO:0004497 ... O31440 40252015
    997883 9iy1:B (2.29) BS01 HEM N/A GO:0004497 ... O31440 40252015
    997884 9iy1:C (2.29) BS01 HEM N/A GO:0004497 ... O31440 40252015
    997885 9iy1:D (2.29) BS01 HEM N/A GO:0004497 ... O31440 40252015
    997886 9iy1:E (2.29) BS01 HEM N/A GO:0004497 ... O31440 40252015
    997887 9iy1:F (2.29) BS01 HEM N/A GO:0004497 ... O31440 40252015
    997888 9iy3:A (2.17) BS01 COA N/A GO:0016747 ... C6WJ45 N/A
    997889 9iy4:A (2.0) BS01 ACO N/A GO:0016747 ... C6WJ45 N/A
    997890 9iy5:A (1.8) BS01 peptide N/A GO:0000122 ... P61964 N/A
    997891 9iy5:B (1.8) BS01 peptide N/A GO:0000122 ... P61964 N/A
    997892 9iy7:A (3.27) BS01 Y01 N/A GO:0001666 ... P31645 N/A
    997893 9iy7:A (3.27) BS02 Y01 N/A GO:0001666 ... P31645 N/A
    997894 9iy7:A (3.27) BS03 JC9 N/A GO:0001666 ... P31645 N/A
    997895 9iy7:A (3.27) BS04 Y01 N/A GO:0001666 ... P31645 N/A
    997896 9iya:A (3.04) BS01 A1L3E N/A GO:0004930 ... P0ABE7
    Q9Y2T6
    39482405
    997897 9iyb:A (2.82) BS01 A1D5Q N/A GO:0001785 ... Q9Y5Y4 39665758
    997898 9iye:A (2.39) BS01 PAE N/A GO:0003824 ... A4W515 N/A
    997899 9iye:B (2.39) BS01 PAE N/A GO:0003824 ... A4W515 N/A
    997900 9iye:C (2.39) BS01 PAE N/A GO:0003824 ... A4W515 N/A
    997901 9iye:D (2.39) BS01 PAE N/A GO:0003824 ... A4W515 N/A
    997902 9iye:E (2.39) BS01 PAE N/A GO:0003824 ... A4W515 N/A
    997903 9iye:F (2.39) BS01 PAE N/A GO:0003824 ... A4W515 N/A
    997904 9iyf:A (2.37) BS01 PAE N/A GO:0003824 ... A4W515 N/A
    997905 9iyf:B (2.37) BS01 PAE N/A GO:0003824 ... A4W515 N/A
    997906 9iyf:C (2.37) BS01 PAE N/A GO:0003824 ... A4W515 N/A
    997907 9iyf:D (2.37) BS01 PAE N/A GO:0003824 ... A4W515 N/A
    997908 9iyf:E (2.37) BS01 PAE N/A GO:0003824 ... A4W515 N/A
    997909 9iyf:F (2.37) BS01 PAE N/A GO:0003824 ... A4W515 N/A
    997910 9iyh:A (2.25) BS01 PAE N/A GO:0003824 ... A4W515 N/A
    997911 9iyh:B (2.25) BS01 PAE N/A GO:0003824 ... A4W515 N/A
    997912 9iyh:C (2.25) BS01 PAE N/A GO:0003824 ... A4W515 N/A
    997913 9iyh:D (2.25) BS01 PAE N/A GO:0003824 ... A4W515 N/A
    997914 9iyh:E (2.25) BS01 PAE N/A GO:0003824 ... A4W515 N/A
    997915 9iyh:F (2.25) BS01 PAE N/A GO:0003824 ... A4W515 N/A
    997916 9iyi:A (3.73) BS01 CLR N/A GO:0004252 ... A0A286S4J4 41184282
    997917 9iyi:C (3.73) BS01 CLR N/A GO:0004252 ... A0A286S4J4 41184282
    997918 9iyi:D (3.73) BS01 CLR N/A GO:0004252 ... A0A286S4J4 41184282
    997919 9iyi:E (3.73) BS01 CLR N/A GO:0005198 ... D7R9A2 41184282
    997920 9iyi:F (3.73) BS01 CLR N/A GO:0005198 ... D7R9A2 41184282
    997921 9iyi:G (3.73) BS01 CLR N/A GO:0005198 ... D7R9A2 41184282
    997922 9iyi:H (3.73) BS01 CLR N/A GO:0005198 ... D7R9A2 41184282
    997923 9iyk:A (2.34) BS01 CU N/A GO:0000303 ... P00441 40362464
    997924 9iyk:A (2.34) BS02 ZN N/A GO:0000303 ... P00441 40362464
    997925 9iyk:B (2.34) BS01 CU N/A GO:0000303 ... P00441 40362464
    997926 9iyk:B (2.34) BS02 ZN N/A GO:0000303 ... P00441 40362464
    997927 9iyk:C (2.34) BS01 CU N/A GO:0000303 ... P00441 40362464
    997928 9iyk:C (2.34) BS02 ZN N/A GO:0000303 ... P00441 40362464
    997929 9iyk:D (2.34) BS01 CU N/A GO:0000303 ... P00441 40362464
    997930 9iyk:D (2.34) BS02 ZN N/A GO:0000303 ... P00441 40362464
    997931 9iyk:E (2.34) BS01 CU N/A GO:0000303 ... P00441 40362464
    997932 9iyk:E (2.34) BS02 ZN N/A GO:0000303 ... P00441 40362464
    997933 9iyk:F (2.34) BS01 CU N/A GO:0000303 ... P00441 40362464
    997934 9iyk:F (2.34) BS02 ZN N/A GO:0000303 ... P00441 40362464
    997935 9iyk:G (2.34) BS01 CU N/A GO:0000303 ... P00441 40362464
    997936 9iyk:G (2.34) BS02 ZN N/A GO:0000303 ... P00441 40362464
    997937 9iyk:H (2.34) BS01 CU N/A GO:0000303 ... P00441 40362464
    997938 9iyk:H (2.34) BS02 ZN N/A GO:0000303 ... P00441 40362464
    997939 9iyk:I (2.34) BS01 CU N/A GO:0000303 ... P00441 40362464
    997940 9iyk:I (2.34) BS02 ZN N/A GO:0000303 ... P00441 40362464
    997941 9iyk:J (2.34) BS01 CU N/A GO:0000303 ... P00441 40362464
    997942 9iyk:J (2.34) BS02 ZN N/A GO:0000303 ... P00441 40362464
    997943 9iyk:K (2.34) BS01 CU N/A GO:0000303 ... P00441 40362464
    997944 9iyk:K (2.34) BS02 ZN N/A GO:0000303 ... P00441 40362464
    997945 9iyk:L (2.34) BS01 CU N/A GO:0000303 ... P00441 40362464
    997946 9iyk:L (2.34) BS02 ZN N/A GO:0000303 ... P00441 40362464
    997947 9iyl:A (1.28) BS01 SF4 N/A GO:0003824 ... Q9F8A8 N/A
    997948 9iyl:A (1.28) BS02 FES N/A GO:0003824 ... Q9F8A8 N/A
    997949 9iyl:A (1.28) BS03 XCC N/A GO:0003824 ... Q9F8A8 N/A
    997950 9iyl:A (1.28) BS04 FE N/A GO:0003824 ... Q9F8A8 N/A
    997951 9iym:A (1.82) BS01 SF4 N/A GO:0003824 ... Q9F8A8 N/A
    997952 9iym:A (1.82) BS02 FES N/A GO:0003824 ... Q9F8A8 N/A
    997953 9iym:A (1.82) BS03 XCC N/A GO:0003824 ... Q9F8A8 N/A
    997954 9iym:A (1.82) BS04 FE N/A GO:0003824 ... Q9F8A8 N/A
    997955 9iyn:A (1.83) BS01 SF4 N/A GO:0003824 ... Q9F8A8 N/A
    997956 9iyn:A (1.83) BS02 FES N/A GO:0003824 ... Q9F8A8 N/A
    997957 9iyn:A (1.83) BS03 XCC N/A GO:0003824 ... Q9F8A8 N/A
    997958 9iyn:A (1.83) BS04 FE N/A GO:0003824 ... Q9F8A8 N/A
    997959 9iyo:A (2.0) BS01 SF4 N/A GO:0003824 ... Q9F8A8 N/A
    997960 9iyo:A (2.0) BS02 FES N/A GO:0003824 ... Q9F8A8 N/A
    997961 9iyo:A (2.0) BS03 XCC N/A GO:0003824 ... Q9F8A8 N/A
    997962 9iyo:A (2.0) BS04 FE N/A GO:0003824 ... Q9F8A8 N/A
    997963 9iyp:A (3.27) BS01 GLY N/A GO:0005216 ... Q05586 40010346
    997964 9iyp:B (3.27) BS01 7RC N/A GO:0005216 ... Q13224 40010346
    997965 9iyp:C (3.27) BS01 GLY N/A GO:0005216 ... Q05586 40010346
    997966 9iyp:D (3.27) BS01 7RC N/A GO:0005216 ... Q13224 40010346
    997967 9iyq:A (3.18) BS01 GLY N/A GO:0015276 ... Q05586 40010346
    997968 9iyq:B (3.18) BS01 7RC N/A GO:0005216 ... Q13224 40010346
    997969 9iyq:C (3.18) BS01 GLY N/A GO:0015276 ... Q05586 40010346
    997970 9iyq:D (3.18) BS01 7RC N/A GO:0005216 ... Q13224 40010346
    997971 9iyr:A (1.45) BS01 SF4 N/A GO:0003824 ... Q9F8A8 N/A
    997972 9iyr:A (1.45) BS02 FES N/A GO:0003824 ... Q9F8A8 N/A
    997973 9iyr:A (1.45) BS03 XCC N/A GO:0003824 ... Q9F8A8 N/A
    997974 9iyr:A (1.45) BS04 FE N/A GO:0003824 ... Q9F8A8 N/A
    997975 9iys:A (1.55) BS01 SF4 N/A GO:0003824 ... Q9F8A8 N/A
    997976 9iys:A (1.55) BS02 FES N/A GO:0003824 ... Q9F8A8 N/A
    997977 9iys:A (1.55) BS03 XCC N/A GO:0003824 ... Q9F8A8 N/A
    997978 9iys:A (1.55) BS04 FE N/A GO:0003824 ... Q9F8A8 N/A
    997979 9iyt:A (2.0) BS01 SF4 N/A GO:0003824 ... Q9F8A8 N/A
    997980 9iyt:A (2.0) BS02 FES N/A GO:0003824 ... Q9F8A8 N/A
    997981 9iyt:A (2.0) BS03 XCC N/A GO:0003824 ... Q9F8A8 N/A
    997982 9iyt:A (2.0) BS04 FE N/A GO:0003824 ... Q9F8A8 N/A
    997983 9iyu:A (2.0) BS01 SF4 N/A GO:0003824 ... Q9F8A8 N/A
    997984 9iyu:A (2.0) BS02 FES N/A GO:0003824 ... Q9F8A8 N/A
    997985 9iyu:A (2.0) BS03 XCC N/A GO:0003824 ... Q9F8A8 N/A
    997986 9iyu:A (2.0) BS04 FE N/A GO:0003824 ... Q9F8A8 N/A
    997987 9iyv:A (2.5) BS01 SF4 N/A GO:0003824 ... Q9F8A8 N/A
    997988 9iyv:A (2.5) BS02 FE N/A GO:0003824 ... Q9F8A8 N/A
    997989 9iyv:A (2.5) BS03 FE N/A GO:0003824 ... Q9F8A8 N/A
    997990 9iyv:A (2.5) BS04 FE N/A GO:0003824 ... Q9F8A8 N/A
    997991 9iyx:A (3.6) BS01 ZN N/A GO:0016032 ... V9P415 39805867
    997992 9iyx:B (3.6) BS01 ZN N/A GO:0016032 ... V9P415 39805867
    997993 9iz0:A (3.63) BS01 peptide N/A GO:0000077 ... O74630 40128540
    997994 9iz0:A (3.63) BS02 ANP N/A GO:0000077 ... O74630 40128540
    997995 9iz0:B (3.63) BS01 ANP N/A GO:0000077 ... O74630 40128540
    997996 9iz1:A (2.73) BS01 DON N/A GO:0003883 ... Q9VUL1 39173734
    997997 9iz1:A (2.73) BS02 MG N/A GO:0003883 ... Q9VUL1 39173734
    997998 9iz1:A (2.73) BS03 DAT N/A GO:0003883 ... Q9VUL1 39173734
    997999 9iz1:A (2.73) BS04 DGT N/A GO:0003883 ... Q9VUL1 39173734
    998000 9iz1:A (2.73) BS05 5ZL N/A GO:0003883 ... Q9VUL1 39173734

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).