SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    998001 9iz1:A (2.73) BS06 5ZL N/A GO:0003883 ... Q9VUL1 39173734
    998002 9iz1:B (2.73) BS01 5ZL N/A GO:0003883 ... Q9VUL1 39173734
    998003 9iz1:B (2.73) BS02 DON N/A GO:0003883 ... Q9VUL1 39173734
    998004 9iz1:B (2.73) BS03 MG N/A GO:0003883 ... Q9VUL1 39173734
    998005 9iz1:B (2.73) BS04 DAT N/A GO:0003883 ... Q9VUL1 39173734
    998006 9iz1:B (2.73) BS05 DGT N/A GO:0003883 ... Q9VUL1 39173734
    998007 9iz1:B (2.73) BS06 5ZL N/A GO:0003883 ... Q9VUL1 39173734
    998008 9iz1:C (2.73) BS01 DON N/A GO:0003883 ... Q9VUL1 39173734
    998009 9iz1:C (2.73) BS02 MG N/A GO:0003883 ... Q9VUL1 39173734
    998010 9iz1:C (2.73) BS03 DAT N/A GO:0003883 ... Q9VUL1 39173734
    998011 9iz1:C (2.73) BS04 DGT N/A GO:0003883 ... Q9VUL1 39173734
    998012 9iz1:C (2.73) BS05 5ZL N/A GO:0003883 ... Q9VUL1 39173734
    998013 9iz1:C (2.73) BS06 5ZL N/A GO:0003883 ... Q9VUL1 39173734
    998014 9iz1:D (2.73) BS01 5ZL N/A GO:0003883 ... Q9VUL1 39173734
    998015 9iz1:D (2.73) BS02 DON N/A GO:0003883 ... Q9VUL1 39173734
    998016 9iz1:D (2.73) BS03 MG N/A GO:0003883 ... Q9VUL1 39173734
    998017 9iz1:D (2.73) BS04 DAT N/A GO:0003883 ... Q9VUL1 39173734
    998018 9iz1:D (2.73) BS05 DGT N/A GO:0003883 ... Q9VUL1 39173734
    998019 9iz1:D (2.73) BS06 5ZL N/A GO:0003883 ... Q9VUL1 39173734
    998020 9iz2:A (2.79) BS01 DON N/A GO:0003883 ... Q9VUL1 39173734
    998021 9iz2:A (2.79) BS02 MG N/A GO:0003883 ... Q9VUL1 39173734
    998022 9iz2:A (2.79) BS03 DAT N/A GO:0003883 ... Q9VUL1 39173734
    998023 9iz2:A (2.79) BS04 DGT N/A GO:0003883 ... Q9VUL1 39173734
    998024 9iz2:A (2.79) BS05 5ZL N/A GO:0003883 ... Q9VUL1 39173734
    998025 9iz2:B (2.79) BS01 5ZL N/A GO:0003883 ... Q9VUL1 39173734
    998026 9iz2:C (2.79) BS01 DGT N/A GO:0003883 ... Q9VUL1 39173734
    998027 9iz4:A (3.05) BS01 TPP N/A GO:0030976 ... D4HRI2 39586109
    998028 9iz4:B (3.05) BS01 MG N/A GO:0000287 ... D4HRI3 39586109
    998029 9iz4:B (3.05) BS02 TPP N/A GO:0000287 ... D4HRI3 39586109
    998030 9iz4:C (3.05) BS01 TPP N/A GO:0030976 ... D4HRI2 39586109
    998031 9iz4:D (3.05) BS01 MG N/A GO:0000287 ... D4HRI3 39586109
    998032 9iz4:D (3.05) BS02 TPP N/A GO:0000287 ... D4HRI3 39586109
    998033 9iz4:E (3.05) BS01 SPV N/A GO:0030976 ... D4HRI2 39586109
    998034 9iz4:E (3.05) BS02 TPP N/A GO:0030976 ... D4HRI2 39586109
    998035 9iz4:F (3.05) BS01 MG N/A GO:0000287 ... D4HRI3 39586109
    998036 9iz4:F (3.05) BS02 TPP N/A GO:0000287 ... D4HRI3 39586109
    998037 9iz4:G (3.05) BS01 TPP N/A GO:0030976 ... D4HRI2 39586109
    998038 9iz4:G (3.05) BS02 SPV N/A GO:0030976 ... D4HRI2 39586109
    998039 9iz4:H (3.05) BS01 MG N/A GO:0000287 ... D4HRI3 39586109
    998040 9iz4:H (3.05) BS02 TPP N/A GO:0000287 ... D4HRI3 39586109
    998041 9iz4:I (3.05) BS01 TPP N/A GO:0030976 ... D4HRI2 39586109
    998042 9iz4:J (3.05) BS01 MG N/A GO:0000287 ... D4HRI3 39586109
    998043 9iz4:J (3.05) BS02 TPP N/A GO:0000287 ... D4HRI3 39586109
    998044 9iz4:K (3.05) BS01 TPP N/A GO:0030976 ... D4HRI2 39586109
    998045 9iz4:K (3.05) BS02 SPV N/A GO:0030976 ... D4HRI2 39586109
    998046 9iz4:L (3.05) BS01 MG N/A GO:0000287 ... D4HRI3 39586109
    998047 9iz4:L (3.05) BS02 TPP N/A GO:0000287 ... D4HRI3 39586109
    998048 9iz8:A (1.54) BS01 HEM N/A N/A G2R8M6 41407708
    998049 9iz8:A (1.54) BS02 MG N/A N/A G2R8M6 41407708
    998050 9iz9:B (3.3) BS01 CLR N/A GO:0004252 ... A0A286S4J4 N/A
    998051 9iz9:C (3.3) BS01 BMA N/A GO:0004252 ... A0A286S4J4 N/A
    998052 9iz9:C (3.3) BS02 CLR N/A GO:0004252 ... A0A286S4J4 N/A
    998053 9iz9:D (3.3) BS01 CLR N/A GO:0004252 ... A0A286S4J4 N/A
    998054 9iz9:E (3.3) BS01 CLR N/A GO:0005198 ... D7R9A2 N/A
    998055 9iz9:F (3.3) BS01 CLR N/A GO:0005198 ... D7R9A2 N/A
    998056 9iz9:G (3.3) BS01 CLR N/A GO:0005198 ... D7R9A2 N/A
    998057 9iz9:H (3.3) BS01 CLR N/A GO:0005198 ... D7R9A2 N/A
    998058 9iza:A (3.06) BS01 A1EAD N/A GO:0004930 ... Q8TDS4 40233099
    998059 9izb:A (2.6) BS01 peptide N/A GO:0008233 ... P0DTC1 40670362
    998060 9izc:A (2.68) BS01 XOT N/A GO:0004930 ... Q8TDS4 40233099
    998061 9izd:A (3.16) BS01 A1D71 N/A GO:0004930 ... Q9BXC0 40233099
    998062 9ize:A (1.87) BS01 GLC N/A GO:0004553 ... A0A7H4P971 40846838
    998063 9ize:A (1.87) BS02 A1EAX N/A GO:0004553 ... A0A7H4P971 40846838
    998064 9izf:R (3.14) BS01 NKP N/A GO:0001965 ... P0ABE7
    Q92633
    39725093
    998065 9izg:R (3.04) BS01 NKP N/A GO:0001965 ... P0ABE7
    Q92633
    39725093
    998066 9izh:R (3.04) BS01 NKP N/A GO:0001965 ... P0ABE7
    Q92633
    39725093
    998067 9izl:A (2.28) BS01 A1EAG N/A GO:0002526 ... O95497 39514323
    998068 9izl:B (2.28) BS01 A1EAG N/A GO:0002526 ... O95497 39514323
    998069 9izm:A (3.02) BS01 rna N/A N/A N/A 40473912
    998070 9izo:A (2.13) BS01 A1EAX N/A GO:0004553 ... A0ABD7ANA7 40846838
    998071 9izp:A (2.89) BS01 rna N/A N/A N/A 40473912
    998072 9izp:A (2.89) BS02 dna N/A N/A N/A 40473912
    998073 9izp:A (2.89) BS03 dna N/A N/A N/A 40473912
    998074 9izq:A (3.06) BS01 rna N/A N/A N/A 40473912
    998075 9izq:A (3.06) BS02 dna N/A N/A N/A 40473912
    998076 9izq:A (3.06) BS03 dna N/A N/A N/A 40473912
    998077 9izr:A (2.93) BS01 rna N/A N/A N/A 40473912
    998078 9izr:A (2.93) BS02 dna N/A N/A N/A 40473912
    998079 9izr:A (2.93) BS03 dna N/A N/A N/A 40473912
    998080 9izr:A (2.93) BS04 MG N/A N/A N/A 40473912
    998081 9izr:A (2.93) BS05 MG N/A N/A N/A 40473912
    998082 9izr:A (2.93) BS06 GS N/A N/A N/A 40473912
    998083 9izr:A (2.93) BS07 SC N/A N/A N/A 40473912
    998084 9izr:A (2.93) BS08 AS N/A N/A N/A 40473912
    998085 9izr:A (2.93) BS09 SC N/A N/A N/A 40473912
    998086 9izr:A (2.93) BS10 SC N/A N/A N/A 40473912
    998087 9izs:A (2.84) BS01 rna N/A N/A N/A 40473912
    998088 9izs:A (2.84) BS02 dna N/A N/A N/A 40473912
    998089 9izs:A (2.84) BS03 dna N/A N/A N/A 40473912
    998090 9izs:A (2.84) BS04 MG N/A N/A N/A 40473912
    998091 9izs:A (2.84) BS05 MG N/A N/A N/A 40473912
    998092 9j03:C (2.7) BS01 2IL N/A GO:0001530 ... Q9Y6Y9 40325026
    998093 9j03:C (2.7) BS02 2IL N/A GO:0001530 ... Q9Y6Y9 40325026
    998094 9j03:C (2.7) BS03 2IL N/A GO:0001530 ... Q9Y6Y9 40325026
    998095 9j03:D (2.7) BS01 2IL N/A GO:0001530 ... Q9Y6Y9 40325026
    998096 9j03:D (2.7) BS02 2IL N/A GO:0001530 ... Q9Y6Y9 40325026
    998097 9j03:D (2.7) BS03 2IL N/A GO:0001530 ... Q9Y6Y9 40325026
    998098 9j04:A (3.15) BS01 L8P N/A GO:0005452 ... Q4U2R8 39951534
    998099 9j06:A (3.68) BS01 GBM N/A GO:0005452 ... Q4U2R8 39951534
    998100 9j08:A (1.9) BS01 ACT N/A GO:0030600 ... Q2UR69 39876052
    998101 9j09:A (2.95) BS01 dna N/A N/A A0A7D4LAR1 40595633
    998102 9j09:A (2.95) BS02 dna N/A N/A A0A7D4LAR1 40595633
    998103 9j09:A (2.95) BS03 rna N/A N/A A0A7D4LAR1 40595633
    998104 9j0a:A (3.3) BS01 peptide N/A N/A O35638 39847329
    998105 9j0a:B (3.3) BS01 peptide N/A GO:0007062 ... Q61550 39847329
    998106 9j0a:D (3.3) BS01 peptide N/A N/A O35638 39847329
    998107 9j0a:E (3.3) BS01 peptide N/A GO:0007062 ... Q61550 39847329
    998108 9j0b:R (2.88) BS01 UPG N/A GO:0004930 ... Q15391 40360473
    998109 9j0e:A (1.46) BS01 NAP N/A GO:0016491 ... S3ZG23 N/A
    998110 9j0e:A (1.46) BS02 NAP N/A GO:0016491 ... S3ZG23 N/A
    998111 9j0e:B (1.46) BS01 NAP N/A GO:0016491 ... S3ZG23 N/A
    998112 9j0e:B (1.46) BS02 NAP N/A GO:0016491 ... S3ZG23 N/A
    998113 9j0f:R (2.76) BS01 NAI N/A GO:0004930 ... Q15391 40360473
    998114 9j0g:A (3.1) BS01 GDP N/A GO:0000281 ... P61586 N/A
    998115 9j0g:A (3.1) BS02 MG N/A GO:0000281 ... P61586 N/A
    998116 9j0g:B (3.1) BS01 GDP N/A GO:0000281 ... P61586 N/A
    998117 9j0g:B (3.1) BS02 MG N/A GO:0000281 ... P61586 N/A
    998118 9j0g:C (3.1) BS01 GDP N/A GO:0000281 ... P61586 N/A
    998119 9j0g:C (3.1) BS02 MG N/A GO:0000281 ... P61586 N/A
    998120 9j0g:D (3.1) BS01 U6L N/A GO:0000281 ... P61586 N/A
    998121 9j0g:D (3.1) BS02 GDP N/A GO:0000281 ... P61586 N/A
    998122 9j0g:D (3.1) BS03 MG N/A GO:0000281 ... P61586 N/A
    998123 9j0g:D (3.1) BS04 MG N/A GO:0000281 ... P61586 N/A
    998124 9j0i:R (2.76) BS01 UGA N/A GO:0004930 ... Q15391 40360473
    998125 9j0j:A (2.85) BS01 FE N/A GO:0016491 ... N/A 40480968
    998126 9j0j:A (2.85) BS02 ZN N/A GO:0016491 ... N/A 40480968
    998127 9j0k:A (2.698) BS01 peptide N/A GO:0003677 ... P10828 40539969
    998128 9j0k:A (2.698) BS02 A1EAE N/A GO:0003677 ... P10828 40539969
    998129 9j0k:B (2.698) BS01 peptide N/A GO:0003677 ... P10828 40539969
    998130 9j0k:B (2.698) BS02 A1EAE N/A GO:0003677 ... P10828 40539969
    998131 9j0n:A (3.4) BS01 rna N/A GO:0001172 ... A0A8D1DPV6 40043114
    998132 9j0n:A (3.4) BS02 dna N/A GO:0001172 ... A0A8D1DPV6 40043114
    998133 9j0n:A (3.4) BS03 ZN N/A GO:0001172 ... A0A8D1DPV6 40043114
    998134 9j0n:A (3.4) BS04 ZN N/A GO:0001172 ... A0A8D1DPV6 40043114
    998135 9j0n:A (3.4) BS05 MG N/A GO:0001172 ... A0A8D1DPV6 40043114
    998136 9j0n:B (3.4) BS01 rna N/A GO:0001172 ... A0A0B8RVL1 40043114
    998137 9j0n:B (3.4) BS02 dna N/A GO:0001172 ... A0A0B8RVL1 40043114
    998138 9j0n:B (3.4) BS03 ZN N/A GO:0001172 ... A0A0B8RVL1 40043114
    998139 9j0n:C (3.4) BS01 ZN N/A GO:0003677 ... I3LCH3 40043114
    998140 9j0n:I (3.4) BS01 ZN N/A GO:0001193 ... P60899 40043114
    998141 9j0n:I (3.4) BS02 ZN N/A GO:0001193 ... P60899 40043114
    998142 9j0n:J (3.4) BS01 ZN N/A GO:0003677 ... A0A8W4F9W9 40043114
    998143 9j0n:L (3.4) BS01 ZN N/A GO:0001650 ... A0A4X1TRS6 40043114
    998144 9j0n:a (3.4) BS01 dna N/A GO:0000776 ... P84243 40043114
    998145 9j0n:a (3.4) BS02 dna N/A GO:0000776 ... P84243 40043114
    998146 9j0n:b (3.4) BS01 dna N/A GO:0000781 ... P62805 40043114
    998147 9j0n:b (3.4) BS02 dna N/A GO:0000781 ... P62805 40043114
    998148 9j0n:c (3.4) BS01 dna N/A GO:0000786 ... P04908 40043114
    998149 9j0n:c (3.4) BS02 dna N/A GO:0000786 ... P04908 40043114
    998150 9j0n:d (3.4) BS01 dna N/A GO:0000786 ... P06899 40043114
    998151 9j0n:d (3.4) BS02 dna N/A GO:0000786 ... P06899 40043114
    998152 9j0n:e (3.4) BS01 dna N/A GO:0000776 ... P84243 40043114
    998153 9j0n:e (3.4) BS02 dna N/A GO:0000776 ... P84243 40043114
    998154 9j0n:f (3.4) BS01 dna N/A GO:0000781 ... P62805 40043114
    998155 9j0n:f (3.4) BS02 dna N/A GO:0000781 ... P62805 40043114
    998156 9j0n:g (3.4) BS01 dna N/A GO:0000786 ... P04908 40043114
    998157 9j0n:g (3.4) BS02 dna N/A GO:0000786 ... P04908 40043114
    998158 9j0n:h (3.4) BS01 dna N/A GO:0000786 ... P06899 40043114
    998159 9j0n:h (3.4) BS02 dna N/A GO:0000786 ... P06899 40043114
    998160 9j0o:A (3.3) BS01 dna N/A GO:0001172 ... A0A8D1DPV6 40043114
    998161 9j0o:A (3.3) BS02 rna N/A GO:0001172 ... A0A8D1DPV6 40043114
    998162 9j0o:A (3.3) BS03 dna N/A GO:0001172 ... A0A8D1DPV6 40043114
    998163 9j0o:A (3.3) BS04 ZN N/A GO:0001172 ... A0A8D1DPV6 40043114
    998164 9j0o:A (3.3) BS05 ZN N/A GO:0001172 ... A0A8D1DPV6 40043114
    998165 9j0o:A (3.3) BS06 MG N/A GO:0001172 ... A0A8D1DPV6 40043114
    998166 9j0o:B (3.3) BS01 rna N/A GO:0001172 ... A0A0B8RVL1 40043114
    998167 9j0o:B (3.3) BS02 dna N/A GO:0001172 ... A0A0B8RVL1 40043114
    998168 9j0o:B (3.3) BS03 ZN N/A GO:0001172 ... A0A0B8RVL1 40043114
    998169 9j0o:C (3.3) BS01 ZN N/A GO:0003677 ... I3LCH3 40043114
    998170 9j0o:E (3.3) BS01 dna N/A GO:0003677 ... I3LSI7 40043114
    998171 9j0o:I (3.3) BS01 ZN N/A GO:0001193 ... P60899 40043114
    998172 9j0o:I (3.3) BS02 ZN N/A GO:0001193 ... P60899 40043114
    998173 9j0o:J (3.3) BS01 ZN N/A GO:0003677 ... A0A8W4F9W9 40043114
    998174 9j0o:L (3.3) BS01 ZN N/A GO:0001650 ... A0A4X1TRS6 40043114
    998175 9j0o:Y (3.3) BS01 ZN N/A GO:0000122 ... P63272 40043114
    998176 9j0o:Z (3.3) BS01 dna N/A GO:0000122 ... O00267 40043114
    998177 9j0o:a (3.3) BS01 dna N/A GO:0000776 ... P84243 40043114
    998178 9j0o:a (3.3) BS02 dna N/A GO:0000776 ... P84243 40043114
    998179 9j0o:b (3.3) BS01 dna N/A GO:0000781 ... P62805 40043114
    998180 9j0o:b (3.3) BS02 dna N/A GO:0000781 ... P62805 40043114
    998181 9j0o:c (3.3) BS01 dna N/A GO:0000786 ... P04908 40043114
    998182 9j0o:c (3.3) BS02 dna N/A GO:0000786 ... P04908 40043114
    998183 9j0o:d (3.3) BS01 dna N/A GO:0000786 ... P06899 40043114
    998184 9j0o:d (3.3) BS02 dna N/A GO:0000786 ... P06899 40043114
    998185 9j0o:e (3.3) BS01 dna N/A GO:0000776 ... P84243 40043114
    998186 9j0o:e (3.3) BS02 dna N/A GO:0000776 ... P84243 40043114
    998187 9j0o:f (3.3) BS01 dna N/A GO:0000781 ... P62805 40043114
    998188 9j0o:f (3.3) BS02 dna N/A GO:0000781 ... P62805 40043114
    998189 9j0o:g (3.3) BS01 dna N/A GO:0000786 ... P04908 40043114
    998190 9j0o:g (3.3) BS02 dna N/A GO:0000786 ... P04908 40043114
    998191 9j0o:h (3.3) BS01 dna N/A GO:0000786 ... P06899 40043114
    998192 9j0o:h (3.3) BS02 dna N/A GO:0000786 ... P06899 40043114
    998193 9j0p:A (3.3) BS01 dna N/A GO:0001172 ... A0A8D1DPV6 40043114
    998194 9j0p:A (3.3) BS02 rna N/A GO:0001172 ... A0A8D1DPV6 40043114
    998195 9j0p:A (3.3) BS03 ZN N/A GO:0001172 ... A0A8D1DPV6 40043114
    998196 9j0p:A (3.3) BS04 MG N/A GO:0001172 ... A0A8D1DPV6 40043114
    998197 9j0p:B (3.3) BS01 dna N/A GO:0001172 ... A0A0B8RVL1 40043114
    998198 9j0p:B (3.3) BS02 rna N/A GO:0001172 ... A0A0B8RVL1 40043114
    998199 9j0p:B (3.3) BS03 ZN N/A GO:0001172 ... A0A0B8RVL1 40043114
    998200 9j0p:C (3.3) BS01 ZN N/A GO:0003677 ... I3LCH3 40043114

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).