SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    998601 9j2r:A (1.92) BS02 ILE N/A N/A N/A 41028918
    998602 9j2r:B (1.92) BS01 FE2 N/A N/A N/A 41028918
    998603 9j2r:B (1.92) BS02 ILE N/A N/A N/A 41028918
    998604 9j2w:A (2.2) BS01 A1EAH N/A N/A Q8N884 40461475
    998605 9j2w:A (2.2) BS02 ZN N/A N/A Q8N884 40461475
    998606 9j2w:B (2.2) BS01 A1EAH N/A N/A Q8N884 40461475
    998607 9j2w:B (2.2) BS02 ZN N/A N/A Q8N884 40461475
    998608 9j2x:A (2.29) BS01 AEV N/A N/A Q8N884 40461475
    998609 9j2x:A (2.29) BS02 LLS N/A N/A Q8N884 40461475
    998610 9j2x:A (2.29) BS03 ZN N/A N/A Q8N884 40461475
    998611 9j2x:B (2.29) BS01 LLS N/A N/A Q8N884 40461475
    998612 9j2x:B (2.29) BS02 AEV N/A N/A Q8N884 40461475
    998613 9j2x:B (2.29) BS03 ZN N/A N/A Q8N884 40461475
    998614 9j2y:A (2.08) BS01 ZN N/A N/A Q8N884 40461475
    998615 9j2y:A (2.08) BS02 JUJ N/A N/A Q8N884 40461475
    998616 9j2y:B (2.08) BS01 ZN N/A N/A Q8N884 40461475
    998617 9j2y:B (2.08) BS02 JUJ N/A N/A Q8N884 40461475
    998618 9j2z:A (2.39) BS01 ZN N/A N/A Q8C6L5 40461475
    998619 9j2z:B (2.39) BS01 A1EAM N/A N/A Q8C6L5 40461475
    998620 9j2z:B (2.39) BS02 ZN N/A N/A Q8C6L5 40461475
    998621 9j2z:C (2.39) BS01 A1EAM N/A N/A Q8C6L5 40461475
    998622 9j2z:C (2.39) BS02 ZN N/A N/A Q8C6L5 40461475
    998623 9j2z:D (2.39) BS01 A1EAM N/A N/A Q8C6L5 40461475
    998624 9j2z:D (2.39) BS02 ZN N/A N/A Q8C6L5 40461475
    998625 9j30:A (2.0) BS01 FE2 N/A N/A N/A 41028918
    998626 9j30:B (2.0) BS01 FE2 N/A N/A N/A 41028918
    998627 9j33:A (2.3) BS01 FE2 N/A N/A N/A 41028918
    998628 9j33:B (2.3) BS01 FE2 N/A N/A N/A 41028918
    998629 9j37:A (3.3) BS01 CLR N/A GO:0001540 ... P36544 N/A
    998630 9j37:B (3.3) BS01 CLR N/A GO:0001540 ... P36544 N/A
    998631 9j37:C (3.3) BS01 CLR N/A GO:0001540 ... P36544 N/A
    998632 9j37:D (3.3) BS01 CLR N/A GO:0001540 ... P36544 N/A
    998633 9j37:E (3.3) BS01 CLR N/A GO:0001540 ... P36544 N/A
    998634 9j3c:A (2.9) BS01 COA N/A GO:0000154 ... Q9H0A0 40132530
    998635 9j3c:B (2.9) BS01 COA N/A GO:0000154 ... Q9H0A0 40132530
    998636 9j3e:J (3.0) BS01 A1EAN N/A GO:0005886 ... A0A411AKL6 41238543
    998637 9j3e:K (3.0) BS01 A1EAN N/A GO:0005886 ... A0A411AKL6 41238543
    998638 9j3e:L (3.0) BS01 A1EAN N/A GO:0005886 ... A0A411AKL6 41238543
    998639 9j3g:A (1.87) BS01 FE2 N/A N/A N/A 41028918
    998640 9j3l:A (2.72) BS01 ATP N/A GO:0005471 ... Q39002 40074904
    998641 9j3m:A (2.77) BS01 ADP N/A GO:0005471 ... Q39002 40074904
    998642 9j3m:A (2.77) BS02 PO4 N/A GO:0005471 ... Q39002 40074904
    998643 9j3n:A (2.72) BS01 ATP N/A GO:0005471 ... Q9Z8J2 40074904
    998644 9j3p:C (2.1) BS01 ZN N/A GO:0001822 ... P36955 40596696
    998645 9j3p:E (2.1) BS01 ZN N/A GO:0001822 ... P36955 40596696
    998646 9j3q:A (1.9) BS01 ZN N/A GO:0001822 ... P36955 40596696
    998647 9j3u:A (1.83) BS01 34D N/A GO:0006520 ... J7TAF3 40173106
    998648 9j3u:A (1.83) BS02 34D N/A GO:0006520 ... J7TAF3 40173106
    998649 9j3u:B (1.83) BS01 34D N/A GO:0006520 ... J7TAF3 40173106
    998650 9j3u:B (1.83) BS02 34D N/A GO:0006520 ... J7TAF3 40173106
    998651 9j3v:A (2.6) BS01 FE2 N/A N/A C1IC29 41028918
    998652 9j3v:A (2.6) BS02 FE2 N/A N/A C1IC29 41028918
    998653 9j3v:A (2.6) BS03 ILE N/A N/A C1IC29 41028918
    998654 9j3v:B (2.6) BS01 FE2 N/A N/A C1IC29 41028918
    998655 9j3v:B (2.6) BS02 FE2 N/A N/A C1IC29 41028918
    998656 9j3v:B (2.6) BS03 ILE N/A N/A C1IC29 41028918
    998657 9j3v:C (2.6) BS01 FE2 N/A N/A C1IC29 41028918
    998658 9j3v:C (2.6) BS02 FE2 N/A N/A C1IC29 41028918
    998659 9j3v:C (2.6) BS03 ILE N/A N/A C1IC29 41028918
    998660 9j3v:D (2.6) BS01 FE2 N/A N/A C1IC29 41028918
    998661 9j3v:D (2.6) BS02 FE2 N/A N/A C1IC29 41028918
    998662 9j3v:D (2.6) BS03 ILE N/A N/A C1IC29 41028918
    998663 9j3v:E (2.6) BS01 FE2 N/A N/A C1IC29 41028918
    998664 9j3v:E (2.6) BS02 FE2 N/A N/A C1IC29 41028918
    998665 9j3v:F (2.6) BS01 FE2 N/A N/A C1IC29 41028918
    998666 9j3v:F (2.6) BS02 FE2 N/A N/A C1IC29 41028918
    998667 9j3v:F (2.6) BS03 ILE N/A N/A C1IC29 41028918
    998668 9j3w:A (1.73) BS01 GLC N/A N/A N/A N/A
    998669 9j3w:A (1.73) BS02 GLC N/A N/A N/A N/A
    998670 9j3w:A (1.73) BS03 BGC N/A N/A N/A N/A
    998671 9j3x:A (3.3) BS01 CLR N/A GO:0005765 ... Q7Z3F1 40118871
    998672 9j3x:B (3.3) BS01 CLR N/A GO:0005765 ... Q7Z3F1 40118871
    998673 9j3y:A (1.73) BS01 BGC N/A N/A N/A N/A
    998674 9j3y:A (1.73) BS02 BGC N/A N/A N/A N/A
    998675 9j3y:A (1.73) BS03 BGC N/A N/A N/A N/A
    998676 9j40:A (3.4) BS01 IOS N/A GO:0005765 ... Q7Z3F1 40118871
    998677 9j40:A (3.4) BS02 CLR N/A GO:0005765 ... Q7Z3F1 40118871
    998678 9j40:A (3.4) BS03 TRP N/A GO:0005765 ... Q7Z3F1 40118871
    998679 9j40:B (3.4) BS01 IOS N/A GO:0005765 ... Q7Z3F1 40118871
    998680 9j40:B (3.4) BS02 CLR N/A GO:0005765 ... Q7Z3F1 40118871
    998681 9j40:B (3.4) BS03 TRP N/A GO:0005765 ... Q7Z3F1 40118871
    998682 9j42:A (1.75) BS01 BGC N/A N/A N/A N/A
    998683 9j42:A (1.75) BS02 BGC N/A N/A N/A N/A
    998684 9j44:A (1.78) BS01 BGC N/A N/A N/A N/A
    998685 9j44:A (1.78) BS02 BGC N/A N/A N/A N/A
    998686 9j44:A (1.78) BS03 BGC N/A N/A N/A N/A
    998687 9j44:A (1.78) BS04 BGC N/A N/A N/A N/A
    998688 9j45:A (1.7) BS01 BGC N/A N/A N/A N/A
    998689 9j45:A (1.7) BS02 BGC N/A N/A N/A N/A
    998690 9j45:A (1.7) BS03 BGC N/A N/A N/A N/A
    998691 9j47:A (2.38) BS01 FE N/A GO:0005506 ... P72360 40846682
    998692 9j47:A (2.38) BS02 FE N/A GO:0005506 ... P72360 40846682
    998693 9j47:A (2.38) BS03 O N/A GO:0005506 ... P72360 40846682
    998694 9j47:B (2.38) BS01 FE N/A GO:0005506 ... P72360 40846682
    998695 9j47:B (2.38) BS02 FE N/A GO:0005506 ... P72360 40846682
    998696 9j47:B (2.38) BS03 O N/A GO:0005506 ... P72360 40846682
    998697 9j4a:A (2.0) BS01 BGC N/A N/A N/A N/A
    998698 9j4b:A (1.73) BS01 GS1 N/A N/A N/A N/A
    998699 9j4g:A (1.95) BS01 PLS N/A GO:0004372 ... A0A133CK16 39313141
    998700 9j4g:A (1.95) BS02 A1L3N N/A GO:0004372 ... A0A133CK16 39313141
    998701 9j4g:A (1.95) BS03 PLS N/A GO:0004372 ... A0A133CK16 39313141
    998702 9j4g:A (1.95) BS04 A1L3N N/A GO:0004372 ... A0A133CK16 39313141
    998703 9j4g:B (1.95) BS01 PLS N/A GO:0004372 ... A0A133CK16 39313141
    998704 9j4g:B (1.95) BS02 A1L3N N/A GO:0004372 ... A0A133CK16 39313141
    998705 9j4g:B (1.95) BS03 PLS N/A GO:0004372 ... A0A133CK16 39313141
    998706 9j4g:B (1.95) BS04 A1L3N N/A GO:0004372 ... A0A133CK16 39313141
    998707 9j4i:A (1.96) BS01 FRU N/A GO:0033998 ... F8QV43 39098696
    998708 9j4i:A (1.96) BS02 FRU N/A GO:0033998 ... F8QV43 39098696
    998709 9j4i:A (1.96) BS03 FRU N/A GO:0033998 ... F8QV43 39098696
    998710 9j4i:A (1.96) BS04 FRU N/A GO:0033998 ... F8QV43 39098696
    998711 9j4i:A (1.96) BS05 FRU N/A GO:0033998 ... F8QV43 39098696
    998712 9j4i:B (1.96) BS01 FRU N/A GO:0033998 ... F8QV43 39098696
    998713 9j4i:B (1.96) BS02 FRU N/A GO:0033998 ... F8QV43 39098696
    998714 9j4i:B (1.96) BS03 FRU N/A GO:0033998 ... F8QV43 39098696
    998715 9j4i:B (1.96) BS04 GLC N/A GO:0033998 ... F8QV43 39098696
    998716 9j4i:B (1.96) BS05 FRU N/A GO:0033998 ... F8QV43 39098696
    998717 9j4i:B (1.96) BS06 FRU N/A GO:0033998 ... F8QV43 39098696
    998718 9j4i:B (1.96) BS07 FRU N/A GO:0033998 ... F8QV43 39098696
    998719 9j4i:B (1.96) BS08 GLC N/A GO:0033998 ... F8QV43 39098696
    998720 9j4i:C (1.96) BS01 FRU N/A GO:0033998 ... F8QV43 39098696
    998721 9j4i:C (1.96) BS02 FRU N/A GO:0033998 ... F8QV43 39098696
    998722 9j4i:C (1.96) BS03 FRU N/A GO:0033998 ... F8QV43 39098696
    998723 9j4i:C (1.96) BS04 GLC N/A GO:0033998 ... F8QV43 39098696
    998724 9j4i:C (1.96) BS05 FRU N/A GO:0033998 ... F8QV43 39098696
    998725 9j4j:A (2.803) BS01 FRU N/A GO:0033998 ... F8QV43 39098696
    998726 9j4j:A (2.803) BS02 FRU N/A GO:0033998 ... F8QV43 39098696
    998727 9j4j:A (2.803) BS03 FRU N/A GO:0033998 ... F8QV43 39098696
    998728 9j4j:A (2.803) BS04 FRU N/A GO:0033998 ... F8QV43 39098696
    998729 9j4j:A (2.803) BS05 FRU N/A GO:0033998 ... F8QV43 39098696
    998730 9j4j:B (2.803) BS01 GLC N/A GO:0033998 ... F8QV43 39098696
    998731 9j4j:B (2.803) BS02 FRU N/A GO:0033998 ... F8QV43 39098696
    998732 9j4j:B (2.803) BS03 FRU N/A GO:0033998 ... F8QV43 39098696
    998733 9j4j:B (2.803) BS04 FRU N/A GO:0033998 ... F8QV43 39098696
    998734 9j4j:B (2.803) BS05 FRU N/A GO:0033998 ... F8QV43 39098696
    998735 9j4j:B (2.803) BS06 FRU N/A GO:0033998 ... F8QV43 39098696
    998736 9j4j:C (2.803) BS01 FRU N/A GO:0033998 ... F8QV43 39098696
    998737 9j4j:C (2.803) BS02 FRU N/A GO:0033998 ... F8QV43 39098696
    998738 9j4k:A (2.201) BS01 FRU N/A GO:0033998 ... F8QV43 39098696
    998739 9j4k:A (2.201) BS02 GLC N/A GO:0033998 ... F8QV43 39098696
    998740 9j4k:A (2.201) BS03 FRU N/A GO:0033998 ... F8QV43 39098696
    998741 9j4k:A (2.201) BS04 FRU N/A GO:0033998 ... F8QV43 39098696
    998742 9j4k:A (2.201) BS05 FRU N/A GO:0033998 ... F8QV43 39098696
    998743 9j4k:B (2.201) BS01 FRU N/A GO:0033998 ... F8QV43 39098696
    998744 9j4k:B (2.201) BS02 GLC N/A GO:0033998 ... F8QV43 39098696
    998745 9j4k:B (2.201) BS03 FRU N/A GO:0033998 ... F8QV43 39098696
    998746 9j4k:B (2.201) BS04 FRU N/A GO:0033998 ... F8QV43 39098696
    998747 9j4k:C (2.201) BS01 FRU N/A GO:0033998 ... F8QV43 39098696
    998748 9j4p:A (2.25) BS01 ZN N/A GO:0004674 ... Q9CXB8 N/A
    998749 9j4p:B (2.25) BS01 DY0 N/A GO:0004674 ... Q96QP1 N/A
    998750 9j4q:A (2.0) BS01 BGC N/A N/A N/A N/A
    998751 9j4q:A (2.0) BS02 BGC N/A N/A N/A N/A
    998752 9j4q:A (2.0) BS03 BGC N/A N/A N/A N/A
    998753 9j4s:C (2.95) BS01 peptide N/A N/A P01889 N/A
    998754 9j4s:F (2.95) BS01 peptide N/A N/A P01889 N/A
    998755 9j4t:A (2.04) BS01 peptide N/A N/A P01889 41372155
    998756 9j4t:D (2.04) BS01 peptide N/A N/A N/A 41372155
    998757 9j4t:E (2.04) BS01 peptide N/A N/A N/A 41372155
    998758 9j4u:A (2.17) BS01 peptide N/A GO:0000139 ... Q8WLS4 41372155
    998759 9j4u:D (2.17) BS01 peptide N/A N/A N/A 41372155
    998760 9j4u:E (2.17) BS01 peptide N/A N/A N/A 41372155
    998761 9j4v:A (1.98) BS01 peptide N/A N/A P01889 41372155
    998762 9j4v:C (1.98) BS01 peptide N/A N/A P01889 41372155
    998763 9j50:A (2.8) BS01 PO4 N/A GO:0004015 ... Q9I6J2 40436318
    998764 9j50:D (2.8) BS01 PO4 N/A GO:0004015 ... Q9I6J2 40436318
    998765 9j51:A (3.1) BS01 PO4 N/A GO:0000822 ... Q9UBH6 39747008
    998766 9j52:A (3.1) BS01 PO4 N/A GO:0000822 ... Q9UBH6 39747008
    998767 9j53:A (3.3) BS01 PO4 N/A GO:0000822 ... Q9UBH6 39747008
    998768 9j53:B (3.3) BS01 PO4 N/A GO:0000822 ... Q9UBH6 39747008
    998769 9j54:A (1.61) BS01 peptide N/A GO:0000045 ... Q8TDY2 41073433
    998770 9j54:C (1.61) BS01 peptide N/A GO:0000045 ... Q8TDY2 41073433
    998771 9j56:A (2.1) BS01 SAH N/A GO:0003824 ... Q54527 39308748
    998772 9j56:A (2.1) BS02 A1L3V N/A GO:0003824 ... Q54527 39308748
    998773 9j56:B (2.1) BS01 SAH N/A GO:0003824 ... Q54527 39308748
    998774 9j56:B (2.1) BS02 A1L3V N/A GO:0003824 ... Q54527 39308748
    998775 9j57:A (1.8) BS01 R5C N/A GO:0003824 ... G8TV28 39642872
    998776 9j57:A (1.8) BS02 R5C N/A GO:0003824 ... G8TV28 39642872
    998777 9j58:A (1.5) BS01 JEF N/A GO:0003824 ... G8TV28 39642872
    998778 9j5a:A (1.5) BS01 NPO N/A GO:0003824 ... G8TV28 39642872
    998779 9j5b:A (1.6) BS01 TIK N/A GO:0003824 ... G8TV28 39642872
    998780 9j5b:A (1.6) BS02 TIK N/A GO:0003824 ... G8TV28 39642872
    998781 9j5c:A (2.7) BS01 TKU N/A GO:0003824 ... G8TV28 39642872
    998782 9j5c:A (2.7) BS02 TKU N/A GO:0003824 ... G8TV28 39642872
    998783 9j5d:A (1.5) BS01 TIK N/A GO:0003824 ... G8TV28 39642872
    998784 9j5e:A (1.9) BS01 peptide N/A GO:0005634 ... P32480 40449483
    998785 9j5i:C (3.38) BS01 MN N/A GO:0000159 ... P67775 N/A
    998786 9j5i:C (3.38) BS02 MN N/A GO:0000159 ... P67775 N/A
    998787 9j5i:F (3.38) BS01 MN N/A GO:0000159 ... P67775 N/A
    998788 9j5i:F (3.38) BS02 MN N/A GO:0000159 ... P67775 N/A
    998789 9j5j:D (4.05) BS01 H6P N/A GO:0001817 ... O00481 40334665
    998790 9j5j:E (4.05) BS01 H6P N/A GO:0001817 ... Q7KYR7 40334665
    998791 9j5k:C (3.39) BS01 peptide N/A GO:0000159 ... P67775 N/A
    998792 9j5k:C (3.39) BS02 MN N/A GO:0000159 ... P67775 N/A
    998793 9j5k:C (3.39) BS03 MN N/A GO:0000159 ... P67775 N/A
    998794 9j5k:F (3.39) BS01 peptide N/A GO:0000159 ... P67775 N/A
    998795 9j5k:F (3.39) BS02 MN N/A GO:0000159 ... P67775 N/A
    998796 9j5k:F (3.39) BS03 MN N/A GO:0000159 ... P67775 N/A
    998797 9j5l:1 (2.97) BS01 peptide N/A N/A N/A N/A
    998798 9j5n:C (4.3) BS01 MN N/A GO:0000159 ... P67775 N/A
    998799 9j5n:C (4.3) BS02 MN N/A GO:0000159 ... P67775 N/A
    998800 9j5o:A (3.04) BS01 rna N/A GO:0006400 ... O31457 41554887

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).