SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    999601 9jb2:A (2.9) BS02 peptide N/A GO:0016020 ... P05067 40090459
    999602 9jb2:B (2.9) BS01 peptide N/A GO:0016020 ... P05067 40090459
    999603 9jb2:B (2.9) BS02 peptide N/A GO:0016020 ... P05067 40090459
    999604 9jb2:C (2.9) BS01 peptide N/A GO:0016020 ... P05067 40090459
    999605 9jb2:C (2.9) BS02 peptide N/A GO:0016020 ... P05067 40090459
    999606 9jb2:D (2.9) BS01 peptide N/A GO:0016020 ... P05067 40090459
    999607 9jb2:D (2.9) BS02 peptide N/A GO:0016020 ... P05067 40090459
    999608 9jb2:E (2.9) BS01 peptide N/A GO:0016020 ... P05067 40090459
    999609 9jbe:A (3.31) BS01 Y01 N/A GO:0005765 ... Q7Z3F1 40702016
    999610 9jbe:A (3.31) BS02 Y01 N/A GO:0005765 ... Q7Z3F1 40702016
    999611 9jbe:A (3.31) BS03 CLR N/A GO:0005765 ... Q7Z3F1 40702016
    999612 9jbe:A (3.31) BS04 A1L34 N/A GO:0005765 ... Q7Z3F1 40702016
    999613 9jbe:B (3.31) BS01 Y01 N/A GO:0005765 ... Q7Z3F1 40702016
    999614 9jbe:B (3.31) BS02 Y01 N/A GO:0005765 ... Q7Z3F1 40702016
    999615 9jbe:B (3.31) BS03 A1L34 N/A GO:0005765 ... Q7Z3F1 40702016
    999616 9jbf:A (3.21) BS01 Y01 N/A GO:0005765 ... Q7Z3F1 40702016
    999617 9jbf:A (3.21) BS02 Y01 N/A GO:0005765 ... Q7Z3F1 40702016
    999618 9jbf:A (3.21) BS03 CLR N/A GO:0005765 ... Q7Z3F1 40702016
    999619 9jbf:A (3.21) BS04 P5S N/A GO:0005765 ... Q7Z3F1 40702016
    999620 9jbf:A (3.21) BS05 P5S N/A GO:0005765 ... Q7Z3F1 40702016
    999621 9jbf:A (3.21) BS06 P5S N/A GO:0005765 ... Q7Z3F1 40702016
    999622 9jbf:B (3.21) BS01 P5S N/A GO:0005765 ... Q7Z3F1 40702016
    999623 9jbf:B (3.21) BS02 P5S N/A GO:0005765 ... Q7Z3F1 40702016
    999624 9jbf:B (3.21) BS03 Y01 N/A GO:0005765 ... Q7Z3F1 40702016
    999625 9jbf:B (3.21) BS04 Y01 N/A GO:0005765 ... Q7Z3F1 40702016
    999626 9jbf:B (3.21) BS05 CLR N/A GO:0005765 ... Q7Z3F1 40702016
    999627 9jbf:B (3.21) BS06 P5S N/A GO:0005765 ... Q7Z3F1 40702016
    999628 9jbg:A (3.76) BS01 P5S N/A GO:0005765 ... Q7Z3F1 40702016
    999629 9jbg:B (3.76) BS01 P5S N/A GO:0005765 ... Q7Z3F1 40702016
    999630 9jbm:A (3.83) BS01 peptide N/A GO:0000166 ... Q9HD20 40498833
    999631 9jbn:A (2.3) BS01 AMP N/A GO:0000304 ... Q9SU72 N/A
    999632 9jbn:A (2.3) BS02 RP5 N/A GO:0000304 ... Q9SU72 N/A
    999633 9jbn:B (2.3) BS01 RP5 N/A GO:0001666 ... Q9S745 N/A
    999634 9jbt:A (3.2) BS01 PHE N/A N/A N/A N/A
    999635 9jbu:A (3.8) BS01 AJP N/A N/A N/A N/A
    999636 9jc1:E (2.79) BS01 ADP N/A GO:0005515 ... P07677 40610443
    999637 9jc1:E (2.79) BS02 MG N/A GO:0005515 ... P07677 40610443
    999638 9jc6:A (3.34) BS01 dna N/A GO:0000786 ... P68431 40874595
    999639 9jc6:A (3.34) BS02 dna N/A GO:0000786 ... P68431 40874595
    999640 9jc6:B (3.34) BS01 dna N/A GO:0000781 ... P62805 40874595
    999641 9jc6:B (3.34) BS02 dna N/A GO:0000781 ... P62805 40874595
    999642 9jc6:C (3.34) BS01 dna N/A GO:0000786 ... P04908 40874595
    999643 9jc6:C (3.34) BS02 dna N/A GO:0000786 ... P04908 40874595
    999644 9jc6:D (3.34) BS01 dna N/A GO:0000786 ... P0C1H6 40874595
    999645 9jc6:E (3.34) BS01 dna N/A GO:0000786 ... P68431 40874595
    999646 9jc6:E (3.34) BS02 dna N/A GO:0000786 ... P68431 40874595
    999647 9jc6:F (3.34) BS01 dna N/A GO:0000781 ... P62805 40874595
    999648 9jc6:F (3.34) BS02 dna N/A GO:0000781 ... P62805 40874595
    999649 9jc6:G (3.34) BS01 dna N/A GO:0000786 ... P04908 40874595
    999650 9jc6:G (3.34) BS02 dna N/A GO:0000786 ... P04908 40874595
    999651 9jc6:H (3.34) BS01 dna N/A GO:0000786 ... P0C1H6 40874595
    999652 9jc6:H (3.34) BS02 dna N/A GO:0000786 ... P0C1H6 40874595
    999653 9jc7:A (1.9) BS01 ATP N/A GO:0000166 ... N/A 40479712
    999654 9jc7:B (1.9) BS01 ATP N/A GO:0000166 ... N/A 40479712
    999655 9jc7:B (1.9) BS02 ALA N/A GO:0000166 ... N/A 40479712
    999656 9jce:A (3.59) BS01 peptide N/A GO:0000151 ... Q9UK73 40263465
    999657 9jcl:R (2.76) BS01 ADP N/A GO:0004930 ... P47900 N/A
    999658 9jcl:R (2.76) BS02 CLR N/A GO:0004930 ... P47900 N/A
    999659 9jco:R (2.36) BS01 CLR N/A GO:0004930 ... P46093 40555728
    999660 9jco:R (2.36) BS02 A1L35 N/A GO:0004930 ... P46093 40555728
    999661 9jco:R (2.36) BS03 A1L35 N/A GO:0004930 ... P46093 40555728
    999662 9jcp:R (2.55) BS01 CLR N/A GO:0004930 ... P46093 40555728
    999663 9jcp:R (2.55) BS02 A1L35 N/A GO:0004930 ... P46093 40555728
    999664 9jcp:R (2.55) BS03 A1L35 N/A GO:0004930 ... P46093 40555728
    999665 9jcq:D (2.59) BS01 A1L35 N/A GO:0004930 ... P46093 40555728
    999666 9jcq:D (2.59) BS02 A1L35 N/A GO:0004930 ... P46093 40555728
    999667 9jcq:D (2.59) BS03 CLR N/A GO:0004930 ... P46093 40555728
    999668 9jcq:D (2.59) BS04 CLR N/A GO:0004930 ... P46093 40555728
    999669 9jcx:A (2.75) BS01 CA N/A GO:0016020 ... O15393 40681508
    999670 9jcz:A (2.64) BS01 Y01 N/A GO:0005283 ... P31641 39837997
    999671 9jcz:A (2.64) BS02 Y01 N/A GO:0005283 ... P31641 39837997
    999672 9jcz:A (2.64) BS03 Y01 N/A GO:0005283 ... P31641 39837997
    999673 9jcz:A (2.64) BS04 Y01 N/A GO:0005283 ... P31641 39837997
    999674 9jd0:A (2.0) BS01 CA N/A GO:0016020 ... O15393 40681508
    999675 9jd0:B (2.0) BS01 CA N/A GO:0016020 ... O15393 40681508
    999676 9jd1:C (1.9) BS01 CA N/A GO:0016020 ... O15393 40681508
    999677 9jd2:A () BS01 MTA N/A N/A N/A N/A
    999678 9jd3:A (3.2) BS01 CLR N/A GO:0005283 ... P31641 40615403
    999679 9jd4:A (3.26) BS01 ABU N/A GO:0005283 ... P31641 40615403
    999680 9jd5:A (2.58) BS01 Y01 N/A GO:0005283 ... P31641 39837997
    999681 9jd5:A (2.58) BS02 Y01 N/A GO:0005283 ... P31641 39837997
    999682 9jd5:A (2.58) BS03 3S5 N/A GO:0005283 ... P31641 39837997
    999683 9jd6:A (3.06) BS01 Y01 N/A GO:0005283 ... P31641 39837997
    999684 9jd6:A (3.06) BS02 A1EBD N/A GO:0005283 ... P31641 39837997
    999685 9jdb:A (2.64) BS01 HEM N/A GO:0004096 ... A8C7R6 40044871
    999686 9jdb:B (2.64) BS01 HEM N/A GO:0004096 ... A8C7R6 40044871
    999687 9jdc:A (2.33) BS01 HEM N/A GO:0004096 ... A8C7R6 40044871
    999688 9jdc:A (2.33) BS02 LH6 N/A GO:0004096 ... A8C7R6 40044871
    999689 9jdc:B (2.33) BS01 HEM N/A GO:0004096 ... A8C7R6 40044871
    999690 9jdc:B (2.33) BS02 LH6 N/A GO:0004096 ... A8C7R6 40044871
    999691 9jdd:A (1.9) BS01 CA N/A N/A A0AB38PQQ6 N/A
    999692 9jdj:A (3.5) BS01 CLR N/A GO:0005283 ... P31641 40615403
    999693 9jdj:A (3.5) BS02 CLR N/A GO:0005283 ... P31641 40615403
    999694 9jdj:A (3.5) BS03 CLR N/A GO:0005283 ... P31641 40615403
    999695 9jdj:B (3.5) BS01 CLR N/A GO:0005283 ... P31641 40615403
    999696 9jdj:B (3.5) BS02 CLR N/A GO:0005283 ... P31641 40615403
    999697 9jdl:A (3.98) BS01 CLR N/A GO:0005283 ... P31641 40615403
    999698 9jdl:B (3.98) BS01 CLR N/A GO:0005283 ... P31641 40615403
    999699 9jdn:A (2.18007) BS01 ATP N/A GO:0000166 ... N/A 40479712
    999700 9jdn:A (2.18007) BS02 ALA N/A GO:0000166 ... N/A 40479712
    999701 9jdn:A (2.18007) BS03 ATP N/A GO:0000166 ... N/A 40479712
    999702 9jdn:B (2.18007) BS01 ATP N/A GO:0000166 ... N/A 40479712
    999703 9jdo:A (2.85) BS01 SEP N/A GO:0002020 ... P80188 N/A
    999704 9jds:A (3.4) BS01 IAC N/A GO:0001736 ... Q96247 N/A
    999705 9jdu:A (2.30002) BS01 ZN N/A GO:0004114 ... Q9Y233 40138991
    999706 9jdu:A (2.30002) BS02 A1EBE N/A GO:0004114 ... Q9Y233 40138991
    999707 9jdu:B (2.30002) BS01 ZN N/A GO:0004114 ... Q9Y233 40138991
    999708 9jdu:B (2.30002) BS02 A1EBE N/A GO:0004114 ... Q9Y233 40138991
    999709 9jdv:A (3.32) BS01 URC N/A GO:0005515 ... Q96S37 40169562
    999710 9jdw:A (2.5) BS01 ABA 2.1.4.1 GO:0005515 ... P50440 9915841
    999711 9jdy:A (3.23) BS01 A1AIJ N/A GO:0005515 ... Q96S37 40169562
    999712 9jdz:A (3.5) BS01 A1AIL N/A GO:0005515 ... Q96S37 40169562
    999713 9je0:A (3.23) BS01 R75 N/A GO:0005515 ... Q96S37 40169562
    999714 9je1:A (3.6) BS01 A1AIK N/A GO:0005515 ... Q96S37 40169562
    999715 9je3:D (2.374) BS01 GLC N/A N/A N/A N/A
    999716 9je3:D (2.374) BS02 GLC N/A N/A N/A N/A
    999717 9je3:E (2.374) BS01 GLC N/A N/A N/A N/A
    999718 9je3:G (2.374) BS01 GLC N/A N/A N/A N/A
    999719 9je3:H (2.374) BS01 GLC N/A N/A N/A N/A
    999720 9je3:H (2.374) BS02 GLC N/A N/A N/A N/A
    999721 9je4:A (3.37) BS01 peptide N/A GO:0000122 ... P37840 N/A
    999722 9je4:A (3.37) BS02 peptide N/A GO:0000122 ... P37840 N/A
    999723 9je4:B (3.37) BS01 peptide N/A GO:0000122 ... P37840 N/A
    999724 9je4:C (3.37) BS01 peptide N/A GO:0000122 ... P37840 N/A
    999725 9je4:C (3.37) BS02 peptide N/A GO:0000122 ... P37840 N/A
    999726 9jea:A (3.4) BS01 A1EBT N/A GO:0004930 ... P11229 N/A
    999727 9jed:R (2.58) BS01 HSM N/A GO:0004930 ... Q9H3N8 40877594
    999728 9jee:A (3.51) BS01 GRQ N/A GO:0005216 ... Q8NET8 40108208
    999729 9jee:B (3.51) BS01 GRQ N/A GO:0005216 ... Q8NET8 40108208
    999730 9jee:C (3.51) BS01 GRQ N/A GO:0005216 ... Q8NET8 40108208
    999731 9jee:D (3.51) BS01 GRQ N/A GO:0005216 ... Q8NET8 40108208
    999732 9jef:A (3.62) BS01 A1EBL N/A GO:0005216 ... Q8NET8 40108208
    999733 9jef:B (3.62) BS01 A1EBL N/A GO:0005216 ... Q8NET8 40108208
    999734 9jef:C (3.62) BS01 A1EBL N/A GO:0005216 ... Q8NET8 40108208
    999735 9jef:D (3.62) BS01 A1EBL N/A GO:0005216 ... Q8NET8 40108208
    999736 9jeg:A (3.39) BS01 A1EBM N/A GO:0005216 ... Q8NET8 40108208
    999737 9jeg:A (3.39) BS02 A1EBM N/A GO:0005216 ... Q8NET8 40108208
    999738 9jeg:B (3.39) BS01 A1EBM N/A GO:0005216 ... Q8NET8 40108208
    999739 9jeg:B (3.39) BS02 A1EBM N/A GO:0005216 ... Q8NET8 40108208
    999740 9jeg:C (3.39) BS01 A1EBM N/A GO:0005216 ... Q8NET8 40108208
    999741 9jeg:C (3.39) BS02 A1EBM N/A GO:0005216 ... Q8NET8 40108208
    999742 9jeg:D (3.39) BS01 A1EBM N/A GO:0005216 ... Q8NET8 40108208
    999743 9jeg:D (3.39) BS02 A1EBM N/A GO:0005216 ... Q8NET8 40108208
    999744 9jei:A (3.16) BS01 CA N/A GO:0001525 ... P06756
    Q6MZV7
    N/A
    999745 9jei:A (3.16) BS02 CA N/A GO:0001525 ... P06756
    Q6MZV7
    N/A
    999746 9jei:A (3.16) BS03 CA N/A GO:0001525 ... P06756
    Q6MZV7
    N/A
    999747 9jei:A (3.16) BS04 CA N/A GO:0001525 ... P06756
    Q6MZV7
    N/A
    999748 9jei:A (3.16) BS05 CA N/A GO:0001525 ... P06756
    Q6MZV7
    N/A
    999749 9jei:B (3.16) BS01 MG N/A GO:0001525 ... P05106
    Q6MZV7
    N/A
    999750 9jei:B (3.16) BS02 CA N/A GO:0001525 ... P05106
    Q6MZV7
    N/A
    999751 9jei:B (3.16) BS03 CA N/A GO:0001525 ... P05106
    Q6MZV7
    N/A
    999752 9jel:A (2.98) BS01 A1EBN N/A GO:0003779 ... P23975 41505557
    999753 9jem:A (1.83) BS01 A1EBJ N/A GO:0016620 ... Q59702 41610224
    999754 9jem:B (1.83) BS01 A1EBJ N/A GO:0016620 ... Q59702 41610224
    999755 9jem:C (1.83) BS01 A1EBJ N/A GO:0016620 ... Q59702 41610224
    999756 9jem:D (1.83) BS01 A1EBJ N/A GO:0016620 ... Q59702 41610224
    999757 9jen:A (1.65) BS01 ZN N/A GO:0004553 ... A7MSF4 40835009
    999758 9jen:B (1.65) BS01 ZN N/A GO:0004553 ... A7MSF4 40835009
    999759 9jeo:A (1.87) BS01 GCS N/A GO:0004553 ... A7MSF4 40835009
    999760 9jeo:A (1.87) BS02 ZN N/A GO:0004553 ... A7MSF4 40835009
    999761 9jeo:B (1.87) BS01 GCS N/A GO:0004553 ... A7MSF4 40835009
    999762 9jeo:B (1.87) BS02 ZN N/A GO:0004553 ... A7MSF4 40835009
    999763 9jeo:C (1.87) BS01 GCS N/A GO:0004553 ... A7MSF4 40835009
    999764 9jeo:C (1.87) BS02 ZN N/A GO:0004553 ... A7MSF4 40835009
    999765 9jeo:D (1.87) BS01 GCS N/A GO:0004553 ... A7MSF4 40835009
    999766 9jeo:D (1.87) BS02 ZN N/A GO:0004553 ... A7MSF4 40835009
    999767 9jep:A (2.06) BS01 A1EBQ N/A GO:0016620 ... Q59702 41610224
    999768 9jep:B (2.06) BS01 A1EBQ N/A GO:0016620 ... Q59702 41610224
    999769 9jep:C (2.06) BS01 A1EBQ N/A GO:0016620 ... Q59702 41610224
    999770 9jep:D (2.06) BS01 A1EBQ N/A GO:0016620 ... Q59702 41610224
    999771 9jeq:R (3.05) BS01 HSM N/A GO:0004930 ... Q9Y5N1 40877594
    999772 9jet:A (1.19) BS01 MN N/A N/A Q9X1H0 40260495
    999773 9jet:B (1.19) BS01 MN N/A N/A Q9X1H0 40260495
    999774 9jeu:A (1.19) BS01 FE N/A N/A Q9X1H0 40260495
    999775 9jeu:B (1.19) BS01 FE N/A N/A Q9X1H0 40260495
    999776 9jev:A (1.12) BS01 ZN N/A N/A Q9X1H0 40260495
    999777 9jev:B (1.12) BS01 ZN N/A N/A Q9X1H0 40260495
    999778 9jew:A (1.08) BS01 FE N/A N/A Q9X1H0 40260495
    999779 9jew:B (1.08) BS01 FE N/A N/A Q9X1H0 40260495
    999780 9jf2:A (1.76) BS01 peptide N/A GO:0000045 ... Q9H0R8 41073433
    999781 9jf2:A (1.76) BS02 peptide N/A GO:0000045 ... Q9H0R8 41073433
    999782 9jf2:B (1.76) BS01 peptide N/A GO:0000045 ... Q9H0R8 41073433
    999783 9jf3:A (2.87) BS01 A1EBO N/A GO:0003779 ... P23975 41505557
    999784 9jf4:A (3.6) BS01 A1D63 N/A GO:0004930 ... P28336 N/A
    999785 9jf5:A (1.9) BS01 AG2 N/A GO:0004609 ... Q2UAM5 39321488
    999786 9jf5:B (1.9) BS01 AG2 N/A GO:0004609 ... Q2UAM5 39321488
    999787 9jf5:C (1.9) BS01 AG2 N/A GO:0004609 ... Q2UAM5 39321488
    999788 9jf5:D (1.9) BS01 AG2 N/A GO:0004609 ... Q2UAM5 39321488
    999789 9jf6:A (2.96) BS01 A1EBR N/A N/A Q13526 N/A
    999790 9jf8:A (3.05) BS01 PO4 N/A GO:0000822 ... Q93ZF5 39838070
    999791 9jf9:A (6.26) BS01 dna N/A N/A P06213 40603733
    999792 9jf9:A (6.26) BS02 dna N/A N/A P06213 40603733
    999793 9jf9:B (6.26) BS01 dna N/A N/A P06213 40603733
    999794 9jf9:B (6.26) BS02 dna N/A N/A P06213 40603733
    999795 9jfc:A (2.2) BS01 GDE N/A GO:0005737 ... Q9HXI4 N/A
    999796 9jfc:A (2.2) BS02 GDE N/A GO:0005737 ... Q9HXI4 N/A
    999797 9jfc:E (2.2) BS01 GDE N/A GO:0005737 ... Q9HXI4 N/A
    999798 9jfc:I (2.2) BS01 GDE N/A GO:0005737 ... Q9HXI4 N/A
    999799 9jfc:I (2.2) BS02 GDE N/A GO:0005737 ... Q9HXI4 N/A
    999800 9jfc:M (2.2) BS01 GDE N/A GO:0005737 ... Q9HXI4 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).