SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1000801 9jj8:b (2.79) BS11 CLA N/A GO:0000287 ... Q4G3F5 N/A
    1000802 9jj8:b (2.79) BS12 CLA N/A GO:0000287 ... Q4G3F5 N/A
    1000803 9jj8:b (2.79) BS13 CLA N/A GO:0000287 ... Q4G3F5 N/A
    1000804 9jj8:b (2.79) BS14 CLA N/A GO:0000287 ... Q4G3F5 N/A
    1000805 9jj8:b (2.79) BS15 CLA N/A GO:0000287 ... Q4G3F5 N/A
    1000806 9jj8:b (2.79) BS16 CLA N/A GO:0000287 ... Q4G3F5 N/A
    1000807 9jj8:b (2.79) BS17 CLA N/A GO:0000287 ... Q4G3F5 N/A
    1000808 9jj8:b (2.79) BS18 CLA N/A GO:0000287 ... Q4G3F5 N/A
    1000809 9jj8:b (2.79) BS19 CLA N/A GO:0000287 ... Q4G3F5 N/A
    1000810 9jj8:b (2.79) BS20 CLA N/A GO:0000287 ... Q4G3F5 N/A
    1000811 9jj8:b (2.79) BS21 CLA N/A GO:0000287 ... Q4G3F5 N/A
    1000812 9jj8:b (2.79) BS22 CLA N/A GO:0000287 ... Q4G3F5 N/A
    1000813 9jj8:b (2.79) BS23 CLA N/A GO:0000287 ... Q4G3F5 N/A
    1000814 9jj8:b (2.79) BS24 CLA N/A GO:0000287 ... Q4G3F5 N/A
    1000815 9jj8:b (2.79) BS25 CLA N/A GO:0000287 ... Q4G3F5 N/A
    1000816 9jj8:b (2.79) BS26 CLA N/A GO:0000287 ... Q4G3F5 N/A
    1000817 9jj8:b (2.79) BS27 CLA N/A GO:0000287 ... Q4G3F5 N/A
    1000818 9jj8:b (2.79) BS28 CLA N/A GO:0000287 ... Q4G3F5 N/A
    1000819 9jj8:b (2.79) BS29 CLA N/A GO:0000287 ... Q4G3F5 N/A
    1000820 9jj8:b (2.79) BS30 CLA N/A GO:0000287 ... Q4G3F5 N/A
    1000821 9jj8:b (2.79) BS31 CLA N/A GO:0000287 ... Q4G3F5 N/A
    1000822 9jj8:b (2.79) BS32 CLA N/A GO:0000287 ... Q4G3F5 N/A
    1000823 9jj8:b (2.79) BS33 CLA N/A GO:0000287 ... Q4G3F5 N/A
    1000824 9jj8:b (2.79) BS34 CLA N/A GO:0000287 ... Q4G3F5 N/A
    1000825 9jj8:b (2.79) BS35 CLA N/A GO:0000287 ... Q4G3F5 N/A
    1000826 9jj8:b (2.79) BS36 CLA N/A GO:0000287 ... Q4G3F5 N/A
    1000827 9jj8:b (2.79) BS37 CLA N/A GO:0000287 ... Q4G3F5 N/A
    1000828 9jj8:b (2.79) BS38 CLA N/A GO:0000287 ... Q4G3F5 N/A
    1000829 9jj8:b (2.79) BS39 CLA N/A GO:0000287 ... Q4G3F5 N/A
    1000830 9jj8:b (2.79) BS40 CLA N/A GO:0000287 ... Q4G3F5 N/A
    1000831 9jj8:b (2.79) BS41 CLA N/A GO:0000287 ... Q4G3F5 N/A
    1000832 9jj8:b (2.79) BS42 CLA N/A GO:0000287 ... Q4G3F5 N/A
    1000833 9jj8:b (2.79) BS43 CLA N/A GO:0000287 ... Q4G3F5 N/A
    1000834 9jj8:b (2.79) BS44 PQN N/A GO:0000287 ... Q4G3F5 N/A
    1000835 9jj8:b (2.79) BS45 CLA N/A GO:0000287 ... Q4G3F5 N/A
    1000836 9jj8:b (2.79) BS46 CLA N/A GO:0000287 ... Q4G3F5 N/A
    1000837 9jj8:b (2.79) BS47 CLA N/A GO:0000287 ... Q4G3F5 N/A
    1000838 9jj8:b (2.79) BS48 CLA N/A GO:0000287 ... Q4G3F5 N/A
    1000839 9jj8:c (2.79) BS01 SF4 N/A GO:0009055 ... Q4G3C1 N/A
    1000840 9jj8:c (2.79) BS02 SF4 N/A GO:0009055 ... Q4G3C1 N/A
    1000841 9jj8:f (2.79) BS01 CLA N/A GO:0009522 ... Q4G3B9 N/A
    1000842 9jj8:f (2.79) BS02 CLA N/A GO:0009522 ... Q4G3B9 N/A
    1000843 9jj8:f (2.79) BS03 CLA N/A GO:0009522 ... Q4G3B9 N/A
    1000844 9jj8:f (2.79) BS04 CLA N/A GO:0009522 ... Q4G3B9 N/A
    1000845 9jj8:f (2.79) BS05 CLA N/A GO:0009522 ... Q4G3B9 N/A
    1000846 9jj8:f (2.79) BS06 CLA N/A GO:0009522 ... Q4G3B9 N/A
    1000847 9jj8:f (2.79) BS07 CLA N/A GO:0009522 ... Q4G3B9 N/A
    1000848 9jj8:h (2.79) BS01 CLA N/A N/A R1BKA6 N/A
    1000849 9jj8:h (2.79) BS02 CLA N/A N/A R1BKA6 N/A
    1000850 9jj8:h (2.79) BS03 CLA N/A N/A R1BKA6 N/A
    1000851 9jj8:h (2.79) BS04 CLA N/A N/A R1BKA6 N/A
    1000852 9jj8:h (2.79) BS05 CLA N/A N/A R1BKA6 N/A
    1000853 9jj8:h (2.79) BS06 A1EB1 N/A N/A R1BKA6 N/A
    1000854 9jj8:i (2.79) BS01 CLA N/A GO:0009522 ... Q4G373 N/A
    1000855 9jj8:i (2.79) BS02 CLA N/A GO:0009522 ... Q4G373 N/A
    1000856 9jj8:i (2.79) BS03 CLA N/A GO:0009522 ... Q4G373 N/A
    1000857 9jj8:i (2.79) BS04 CLA N/A GO:0009522 ... Q4G373 N/A
    1000858 9jj8:j (2.79) BS01 CLA N/A GO:0009522 ... Q4G3B8 N/A
    1000859 9jj8:j (2.79) BS02 CLA N/A GO:0009522 ... Q4G3B8 N/A
    1000860 9jj8:j (2.79) BS03 CLA N/A GO:0009522 ... Q4G3B8 N/A
    1000861 9jj8:j (2.79) BS04 CLA N/A GO:0009522 ... Q4G3B8 N/A
    1000862 9jj8:j (2.79) BS05 CLA N/A GO:0009522 ... Q4G3B8 N/A
    1000863 9jj8:j (2.79) BS06 DD6 N/A GO:0009522 ... Q4G3B8 N/A
    1000864 9jj8:j (2.79) BS07 CLA N/A GO:0009522 ... Q4G3B8 N/A
    1000865 9jj8:k (2.79) BS01 CLA N/A GO:0009522 ... A0A7S3X4W4 N/A
    1000866 9jj8:k (2.79) BS02 DD6 N/A GO:0009522 ... A0A7S3X4W4 N/A
    1000867 9jj8:k (2.79) BS03 CLA N/A GO:0009522 ... A0A7S3X4W4 N/A
    1000868 9jj8:k (2.79) BS04 CLA N/A GO:0009522 ... A0A7S3X4W4 N/A
    1000869 9jj8:k (2.79) BS05 CLA N/A GO:0009522 ... A0A7S3X4W4 N/A
    1000870 9jj8:k (2.79) BS06 CLA N/A GO:0009522 ... A0A7S3X4W4 N/A
    1000871 9jj8:k (2.79) BS07 A1EB1 N/A GO:0009522 ... A0A7S3X4W4 N/A
    1000872 9jj8:l (2.79) BS01 CLA N/A GO:0009522 ... Q4G3B5 N/A
    1000873 9jj8:l (2.79) BS02 CLA N/A GO:0009522 ... Q4G3B5 N/A
    1000874 9jj8:l (2.79) BS03 CLA N/A GO:0009522 ... Q4G3B5 N/A
    1000875 9jj8:l (2.79) BS04 CLA N/A GO:0009522 ... Q4G3B5 N/A
    1000876 9jj8:l (2.79) BS05 CLA N/A GO:0009522 ... Q4G3B5 N/A
    1000877 9jj8:l (2.79) BS06 CLA N/A GO:0009522 ... Q4G3B5 N/A
    1000878 9jj8:l (2.79) BS07 CLA N/A GO:0009522 ... Q4G3B5 N/A
    1000879 9jj8:l (2.79) BS08 CLA N/A GO:0009522 ... Q4G3B5 N/A
    1000880 9jj8:m (2.79) BS01 CLA N/A GO:0009535 ... Q4G371 N/A
    1000881 9jj8:m (2.79) BS02 CLA N/A GO:0009535 ... Q4G371 N/A
    1000882 9jj8:o (2.79) BS01 CLA N/A N/A R1DLA7 N/A
    1000883 9jj8:o (2.79) BS02 CLA N/A N/A R1DLA7 N/A
    1000884 9jj8:o (2.79) BS03 CLA N/A N/A R1DLA7 N/A
    1000885 9jj8:o (2.79) BS04 CLA N/A N/A R1DLA7 N/A
    1000886 9jj8:o (2.79) BS05 A86 N/A N/A R1DLA7 N/A
    1000887 9jj8:x (2.79) BS01 A1EB1 N/A GO:0009507 ... R1EIA6 N/A
    1000888 9jj8:x (2.79) BS02 DD6 N/A GO:0009507 ... R1EIA6 N/A
    1000889 9jj8:x (2.79) BS03 A86 N/A GO:0009507 ... R1EIA6 N/A
    1000890 9jj8:x (2.79) BS04 CLA N/A GO:0009507 ... R1EIA6 N/A
    1000891 9jj8:x (2.79) BS05 CLA N/A GO:0009507 ... R1EIA6 N/A
    1000892 9jj8:x (2.79) BS06 CLA N/A GO:0009507 ... R1EIA6 N/A
    1000893 9jj8:x (2.79) BS07 A1ECV N/A GO:0009507 ... R1EIA6 N/A
    1000894 9jj8:x (2.79) BS08 CLA N/A GO:0009507 ... R1EIA6 N/A
    1000895 9jj8:x (2.79) BS09 KC2 N/A GO:0009507 ... R1EIA6 N/A
    1000896 9jj8:x (2.79) BS10 CLA N/A GO:0009507 ... R1EIA6 N/A
    1000897 9jj8:x (2.79) BS11 KC2 N/A GO:0009507 ... R1EIA6 N/A
    1000898 9jj8:y (2.79) BS01 A1EB1 N/A GO:0009507 ... R1EIA6 N/A
    1000899 9jj8:y (2.79) BS02 DD6 N/A GO:0009507 ... R1EIA6 N/A
    1000900 9jj8:y (2.79) BS03 DD6 N/A GO:0009507 ... R1EIA6 N/A
    1000901 9jj8:y (2.79) BS04 A86 N/A GO:0009507 ... R1EIA6 N/A
    1000902 9jj8:y (2.79) BS05 A86 N/A GO:0009507 ... R1EIA6 N/A
    1000903 9jj8:y (2.79) BS06 CLA N/A GO:0009507 ... R1EIA6 N/A
    1000904 9jj8:y (2.79) BS07 CLA N/A GO:0009507 ... R1EIA6 N/A
    1000905 9jj8:y (2.79) BS08 CLA N/A GO:0009507 ... R1EIA6 N/A
    1000906 9jj8:y (2.79) BS09 A1ECV N/A GO:0009507 ... R1EIA6 N/A
    1000907 9jj8:y (2.79) BS10 CLA N/A GO:0009507 ... R1EIA6 N/A
    1000908 9jj8:y (2.79) BS11 KC2 N/A GO:0009507 ... R1EIA6 N/A
    1000909 9jj8:y (2.79) BS12 CLA N/A GO:0009507 ... R1EIA6 N/A
    1000910 9jj8:y (2.79) BS13 KC2 N/A GO:0009507 ... R1EIA6 N/A
    1000911 9jj8:z (2.79) BS01 CLA N/A GO:0009507 ... R1EIA6 N/A
    1000912 9jj8:z (2.79) BS02 CLA N/A GO:0009507 ... R1EIA6 N/A
    1000913 9jj8:z (2.79) BS03 A1EB1 N/A GO:0009507 ... R1EIA6 N/A
    1000914 9jj8:z (2.79) BS04 DD6 N/A GO:0009507 ... R1EIA6 N/A
    1000915 9jj8:z (2.79) BS05 DD6 N/A GO:0009507 ... R1EIA6 N/A
    1000916 9jj8:z (2.79) BS06 CLA N/A GO:0009507 ... R1EIA6 N/A
    1000917 9jj8:z (2.79) BS07 CLA N/A GO:0009507 ... R1EIA6 N/A
    1000918 9jj8:z (2.79) BS08 CLA N/A GO:0009507 ... R1EIA6 N/A
    1000919 9jj8:z (2.79) BS09 A1ECV N/A GO:0009507 ... R1EIA6 N/A
    1000920 9jj8:z (2.79) BS10 CLA N/A GO:0009507 ... R1EIA6 N/A
    1000921 9jj8:z (2.79) BS11 KC2 N/A GO:0009507 ... R1EIA6 N/A
    1000922 9jj8:z (2.79) BS12 CLA N/A GO:0009507 ... R1EIA6 N/A
    1000923 9jj8:z (2.79) BS13 KC2 N/A GO:0009507 ... R1EIA6 N/A
    1000924 9jj8:z (2.79) BS14 A1ECV N/A GO:0009507 ... R1EIA6 N/A
    1000925 9jj8:z (2.79) BS15 CLA N/A GO:0009507 ... R1EIA6 N/A
    1000926 9jj9:B (2.71) BS01 9EF N/A GO:0004315 ... E0D202 40715098
    1000927 9jj9:C (2.71) BS01 9EF N/A GO:0031177 ... E0D202 40715098
    1000928 9jjb:A (2.68) BS01 9EF N/A GO:0004315 ... E0D202 40715098
    1000929 9jjb:B (2.68) BS01 9EF N/A GO:0004315 ... E0D202 40715098
    1000930 9jjb:C (2.68) BS01 9EF N/A GO:0031177 ... E0D202 40715098
    1000931 9jjb:D (2.68) BS01 9EF N/A GO:0031177 ... E0D202 40715098
    1000932 9jje:A (2.52) BS01 CA N/A GO:0005886 ... A7T1N0 39514307
    1000933 9jje:A (2.52) BS02 A2R N/A GO:0005886 ... A7T1N0 39514307
    1000934 9jje:B (2.52) BS01 CA N/A GO:0005886 ... A7T1N0 39514307
    1000935 9jje:B (2.52) BS02 A2R N/A GO:0005886 ... A7T1N0 39514307
    1000936 9jje:C (2.52) BS01 CA N/A GO:0005886 ... A7T1N0 39514307
    1000937 9jje:C (2.52) BS02 A2R N/A GO:0005886 ... A7T1N0 39514307
    1000938 9jje:D (2.52) BS01 CA N/A GO:0005886 ... A7T1N0 39514307
    1000939 9jje:D (2.52) BS02 A2R N/A GO:0005886 ... A7T1N0 39514307
    1000940 9jjf:A (2.65) BS01 CA N/A GO:0005886 ... A7T1N0 39514307
    1000941 9jjf:A (2.65) BS02 A2R N/A GO:0005886 ... A7T1N0 39514307
    1000942 9jjs:A (1.52) BS01 A1D9T N/A N/A Q13526 N/A
    1000943 9jjs:B (1.52) BS01 A1D9T N/A N/A Q13526 N/A
    1000944 9jjv:A (1.88) BS01 GDP N/A GO:0003924 ... Q2VPQ0 40198702
    1000945 9jjv:A (1.88) BS02 ALF N/A GO:0003924 ... Q2VPQ0 40198702
    1000946 9jjv:A (1.88) BS03 MG N/A GO:0003924 ... Q2VPQ0 40198702
    1000947 9jjw:A (2.09) BS01 GDP N/A GO:0003924 ... Q2VPQ0 40198702
    1000948 9jjx:A (2.73) BS01 GDP N/A GO:0003924 ... Q2VPQ0 40198702
    1000949 9jjx:B (2.73) BS01 GDP N/A GO:0003924 ... Q2VPQ0 40198702
    1000950 9jjz:A (1.61) BS01 A1ECA N/A N/A Q13526 N/A
    1000951 9jjz:B (1.61) BS01 A1ECA N/A N/A Q13526 N/A
    1000952 9jk1:A (2.72) BS01 A1EB3 N/A GO:0004672 ... Q9NYV4 40080446
    1000953 9jk1:A (2.72) BS02 MG N/A GO:0004672 ... Q9NYV4 40080446
    1000954 9jk1:B (2.72) BS01 A1EB3 N/A GO:0004672 ... Q9NYV4 40080446
    1000955 9jkb:A (3.93) BS01 peptide N/A GO:0000082 ... Q13616 39406020
    1000956 9jkd:A (2.34) BS01 rna N/A GO:0003723 ... A0A0H5BRR0 40249801
    1000957 9jkd:A (2.34) BS02 rna N/A GO:0003723 ... A0A0H5BRR0 40249801
    1000958 9jkf:A (3.4) BS01 MAN N/A GO:0005198 ... A0ACD6B8K6 40089599
    1000959 9jkf:A (3.4) BS02 83G N/A GO:0005198 ... A0ACD6B8K6 40089599
    1000960 9jkf:C (3.4) BS01 MAN N/A GO:0005198 ... A0ACD6B8K6 40089599
    1000961 9jkf:C (3.4) BS02 83G N/A GO:0005198 ... A0ACD6B8K6 40089599
    1000962 9jkf:E (3.4) BS01 83G N/A GO:0005198 ... A0ACD6B8K6 40089599
    1000963 9jkg:A (3.5) BS01 MAN N/A GO:0005198 ... A0ACD6B8K6 40089599
    1000964 9jkg:A (3.5) BS02 83G N/A GO:0005198 ... A0ACD6B8K6 40089599
    1000965 9jkg:C (3.5) BS01 MAN N/A GO:0005198 ... A0ACD6B8K6 40089599
    1000966 9jkg:C (3.5) BS02 MAN N/A GO:0005198 ... A0ACD6B8K6 40089599
    1000967 9jkg:C (3.5) BS03 83G N/A GO:0005198 ... A0ACD6B8K6 40089599
    1000968 9jkg:E (3.5) BS01 83G N/A GO:0005198 ... A0ACD6B8K6 40089599
    1000969 9jkl:A (2.3) BS01 LYS N/A GO:0000049 ... Q2G0Q3 40622075
    1000970 9jko:A (1.63) BS01 ZN N/A N/A Q86SH2 40388637
    1000971 9jko:A (1.63) BS02 ZN N/A N/A Q86SH2 40388637
    1000972 9jko:A (1.63) BS03 ZN N/A N/A Q86SH2 40388637
    1000973 9jko:B (1.63) BS01 ZN N/A N/A Q86SH2 40388637
    1000974 9jko:B (1.63) BS02 ZN N/A N/A Q86SH2 40388637
    1000975 9jko:B (1.63) BS03 ZN N/A N/A Q86SH2 40388637
    1000976 9jkp:B (2.76) BS01 GDP N/A GO:0000028 ... Q2FY06 39432921
    1000977 9jkq:R (2.66) BS01 B40 N/A GO:0001594 ... P0ABE7
    Q96RJ0
    39358311
    1000978 9jks:A (3.31) BS01 A1EOA N/A GO:0004930 ... P49019 N/A
    1000979 9jkt:A (3.05) BS01 HF2 N/A GO:0004930 ... P49019 N/A
    1000980 9jku:A (1.61) BS01 MTA N/A GO:0003824 ... Q9YAQ8 N/A
    1000981 9jkv:A (3.26) BS01 A1EB5 N/A GO:0004930 ... P49019 N/A
    1000982 9jkw:A (2.19) BS01 HEM N/A GO:0004497 ... P18326 40965121
    1000983 9jkw:A (2.19) BS02 114 N/A GO:0004497 ... P18326 40965121
    1000984 9jkx:A (3.18) BS01 P9X N/A GO:0004930 ... P49019 N/A
    1000985 9jky:A (2.72) BS01 P9X N/A GO:0004930 ... Q8TDS4 N/A
    1000986 9jkz:A (2.4) BS01 HEM N/A GO:0004497 ... P18326 40965121
    1000987 9jkz:A (2.4) BS02 SIM N/A GO:0004497 ... P18326 40965121
    1000988 9jl1:A (3.5) BS01 rna N/A GO:0003676 ... Q99ZW2 N/A
    1000989 9jl2:A (3.0) BS01 dna N/A GO:0003676 ... Q99ZW2 N/A
    1000990 9jl2:A (3.0) BS02 dna N/A GO:0003676 ... Q99ZW2 N/A
    1000991 9jl2:A (3.0) BS03 rna N/A GO:0003676 ... Q99ZW2 N/A
    1000992 9jl5:A (1.8) BS01 HEM N/A GO:0004497 ... P18326 40965121
    1000993 9jlb:A (3.0) BS01 O6E N/A GO:0000155 ... P14713 40404641
    1000994 9jlb:C (3.0) BS01 O6E N/A GO:0000155 ... P14713 40404641
    1000995 9jlc:R (2.98) BS01 A1ECD N/A GO:0004930 ... P04201 N/A
    1000996 9jlh:A (1.61) BS01 HEM N/A GO:0004601 ... B9W4V6 N/A
    1000997 9jlh:A (1.61) BS02 MG N/A GO:0004601 ... B9W4V6 N/A
    1000998 9jlm:A (1.9) BS01 CA N/A N/A N/A 39430940
    1000999 9jlm:B (1.9) BS01 CA N/A N/A N/A 39430940
    1001000 9jln:A (2.84) BS01 Y01 N/A GO:0005283 ... P31641 39837997

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).