SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1001001 9jln:A (2.84) BS02 Y01 N/A GO:0005283 ... P31641 39837997
    1001002 9jln:A (2.84) BS03 Y01 N/A GO:0005283 ... P31641 39837997
    1001003 9jlr:A (2.79) BS01 GLC N/A GO:0003824 ... O66934 N/A
    1001004 9jlr:A (2.79) BS02 GLC N/A GO:0003824 ... O66934 N/A
    1001005 9jlr:A (2.79) BS03 GLC N/A GO:0003824 ... O66934 N/A
    1001006 9jlr:A (2.79) BS04 GLC N/A GO:0003824 ... O66934 N/A
    1001007 9jlr:B (2.79) BS01 GLC N/A GO:0003824 ... O66934 N/A
    1001008 9jlr:B (2.79) BS02 GLC N/A GO:0003824 ... O66934 N/A
    1001009 9jlr:B (2.79) BS03 GLC N/A GO:0003824 ... O66934 N/A
    1001010 9jlr:B (2.79) BS04 GLC N/A GO:0003824 ... O66934 N/A
    1001011 9jlr:C (2.79) BS01 GLC N/A GO:0003824 ... O66934 N/A
    1001012 9jlr:C (2.79) BS02 GLC N/A GO:0003824 ... O66934 N/A
    1001013 9jlr:C (2.79) BS03 GLC N/A GO:0003824 ... O66934 N/A
    1001014 9jlr:C (2.79) BS04 GLC N/A GO:0003824 ... O66934 N/A
    1001015 9jlr:D (2.79) BS01 GLC N/A GO:0003824 ... O66934 N/A
    1001016 9jlr:D (2.79) BS02 GLC N/A GO:0003824 ... O66934 N/A
    1001017 9jlr:D (2.79) BS03 GLC N/A GO:0003824 ... O66934 N/A
    1001018 9jlr:D (2.79) BS04 GLC N/A GO:0003824 ... O66934 N/A
    1001019 9jls:A (3.06) BS01 GLC N/A GO:0003824 ... O66934 N/A
    1001020 9jls:A (3.06) BS02 GLC N/A GO:0003824 ... O66934 N/A
    1001021 9jls:A (3.06) BS03 AC1 N/A GO:0003824 ... O66934 N/A
    1001022 9jls:B (3.06) BS01 GLC N/A GO:0003824 ... O66934 N/A
    1001023 9jls:B (3.06) BS02 GLC N/A GO:0003824 ... O66934 N/A
    1001024 9jls:B (3.06) BS03 AC1 N/A GO:0003824 ... O66934 N/A
    1001025 9jls:C (3.06) BS01 GLC N/A GO:0003824 ... O66934 N/A
    1001026 9jls:C (3.06) BS02 GLC N/A GO:0003824 ... O66934 N/A
    1001027 9jls:C (3.06) BS03 AC1 N/A GO:0003824 ... O66934 N/A
    1001028 9jls:D (3.06) BS01 GLC N/A GO:0003824 ... O66934 N/A
    1001029 9jls:D (3.06) BS02 GLC N/A GO:0003824 ... O66934 N/A
    1001030 9jls:D (3.06) BS03 AC1 N/A GO:0003824 ... O66934 N/A
    1001031 9jlt:A (1.56) BS01 GLC N/A GO:0003824 ... O66934 40120836
    1001032 9jlt:A (1.56) BS02 GLC N/A GO:0003824 ... O66934 40120836
    1001033 9jlt:A (1.56) BS03 GLC N/A GO:0003824 ... O66934 40120836
    1001034 9jlt:A (1.56) BS04 GLC N/A GO:0003824 ... O66934 40120836
    1001035 9jlt:A (1.56) BS05 GLC N/A GO:0003824 ... O66934 40120836
    1001036 9jlt:A (1.56) BS06 GLC N/A GO:0003824 ... O66934 40120836
    1001037 9jlt:B (1.56) BS01 GLC N/A GO:0003824 ... O66934 40120836
    1001038 9jlt:B (1.56) BS02 GLC N/A GO:0003824 ... O66934 40120836
    1001039 9jlt:B (1.56) BS03 GLC N/A GO:0003824 ... O66934 40120836
    1001040 9jlt:B (1.56) BS04 GLC N/A GO:0003824 ... O66934 40120836
    1001041 9jlt:B (1.56) BS05 GLC N/A GO:0003824 ... O66934 40120836
    1001042 9jlt:B (1.56) BS06 GLC N/A GO:0003824 ... O66934 40120836
    1001043 9jlu:A (1.88) BS01 GLC N/A GO:0003824 ... O66934 40120836
    1001044 9jlu:A (1.88) BS02 GLC N/A GO:0003824 ... O66934 40120836
    1001045 9jlu:A (1.88) BS03 GLC N/A GO:0003824 ... O66934 40120836
    1001046 9jlu:A (1.88) BS04 GLC N/A GO:0003824 ... O66934 40120836
    1001047 9jlv:A (1.51) BS01 GLC N/A GO:0003824 ... O66934 40120836
    1001048 9jlv:A (1.51) BS02 GLC N/A GO:0003824 ... O66934 40120836
    1001049 9jlv:A (1.51) BS03 GLC N/A GO:0003824 ... O66934 40120836
    1001050 9jlv:A (1.51) BS04 GLC N/A GO:0003824 ... O66934 40120836
    1001051 9jlv:A (1.51) BS05 GLC N/A GO:0003824 ... O66934 40120836
    1001052 9jlv:A (1.51) BS06 GLC N/A GO:0003824 ... O66934 40120836
    1001053 9jlv:A (1.51) BS07 GLC N/A GO:0003824 ... O66934 40120836
    1001054 9jlv:A (1.51) BS08 GLC N/A GO:0003824 ... O66934 40120836
    1001055 9jlw:A (1.95) BS01 GLC N/A GO:0003824 ... O66934 N/A
    1001056 9jlw:A (1.95) BS02 GLC N/A GO:0003824 ... O66934 N/A
    1001057 9jlw:A (1.95) BS03 GLC N/A GO:0003824 ... O66934 N/A
    1001058 9jlw:A (1.95) BS04 GLC N/A GO:0003824 ... O66934 N/A
    1001059 9jlw:A (1.95) BS05 GLC N/A GO:0003824 ... O66934 N/A
    1001060 9jlw:B (1.95) BS01 GLC N/A GO:0003824 ... O66934 N/A
    1001061 9jlw:B (1.95) BS02 GLC N/A GO:0003824 ... O66934 N/A
    1001062 9jlw:B (1.95) BS03 GLC N/A GO:0003824 ... O66934 N/A
    1001063 9jlw:B (1.95) BS04 GLC N/A GO:0003824 ... O66934 N/A
    1001064 9jlw:B (1.95) BS05 GLC N/A GO:0003824 ... O66934 N/A
    1001065 9jlw:B (1.95) BS06 GLC N/A GO:0003824 ... O66934 N/A
    1001066 9jlx:A (1.83) BS01 GLC N/A N/A O66934 N/A
    1001067 9jlx:A (1.83) BS02 GLC N/A N/A O66934 N/A
    1001068 9jlx:A (1.83) BS03 GLC N/A N/A O66934 N/A
    1001069 9jlx:A (1.83) BS04 GLC N/A N/A O66934 N/A
    1001070 9jlx:A (1.83) BS05 GLC N/A N/A O66934 N/A
    1001071 9jlx:B (1.83) BS01 GLC N/A N/A O66934 N/A
    1001072 9jlx:B (1.83) BS02 GLC N/A N/A O66934 N/A
    1001073 9jlx:B (1.83) BS03 GLC N/A N/A O66934 N/A
    1001074 9jlx:B (1.83) BS04 GLC N/A N/A O66934 N/A
    1001075 9jlx:B (1.83) BS05 GLC N/A N/A O66934 N/A
    1001076 9jlx:C (1.83) BS01 GLC N/A N/A O66934 N/A
    1001077 9jlx:C (1.83) BS02 GLC N/A N/A O66934 N/A
    1001078 9jlx:C (1.83) BS03 GLC N/A N/A O66934 N/A
    1001079 9jlx:C (1.83) BS04 GLC N/A N/A O66934 N/A
    1001080 9jlx:C (1.83) BS05 GLC N/A N/A O66934 N/A
    1001081 9jlx:D (1.83) BS01 GLC N/A N/A O66934 N/A
    1001082 9jlx:D (1.83) BS02 GLC N/A N/A O66934 N/A
    1001083 9jlx:D (1.83) BS03 GLC N/A N/A O66934 N/A
    1001084 9jlx:D (1.83) BS04 GLC N/A N/A O66934 N/A
    1001085 9jlx:D (1.83) BS05 GLC N/A N/A O66934 N/A
    1001086 9jly:A (3.11) BS01 NAP N/A GO:0016491 ... C3PTT2 40406958
    1001087 9jly:B (3.11) BS01 NAP N/A GO:0016491 ... C3PTT2 40406958
    1001088 9jm0:A (2.7) BS01 dna N/A GO:0003723 ... P23070 39395169
    1001089 9jm0:A (2.7) BS02 rna N/A GO:0003723 ... P23070 39395169
    1001090 9jm0:A (2.7) BS03 rna N/A GO:0003723 ... P23070 39395169
    1001091 9jm0:A (2.7) BS04 dna N/A GO:0003723 ... P23070 39395169
    1001092 9jm0:B (2.7) BS01 dna N/A GO:0003723 ... P23070 39395169
    1001093 9jm0:B (2.7) BS02 dna N/A GO:0003723 ... P23070 39395169
    1001094 9jm0:B (2.7) BS03 rna N/A GO:0003723 ... P23070 39395169
    1001095 9jm0:B (2.7) BS04 rna N/A GO:0003723 ... P23070 39395169
    1001096 9jm0:C (2.7) BS01 dna N/A N/A P0DV88 39395169
    1001097 9jm0:C (2.7) BS02 rna N/A N/A P0DV88 39395169
    1001098 9jm0:J (2.7) BS01 dna N/A N/A P0DV88 39395169
    1001099 9jm0:J (2.7) BS02 rna N/A N/A P0DV88 39395169
    1001100 9jm0:J (2.7) BS03 NCA N/A N/A P0DV88 39395169
    1001101 9jm0:J (2.7) BS04 AR6 N/A N/A P0DV88 39395169
    1001102 9jm0:K (2.7) BS01 dna N/A GO:0003723 ... P23070 39395169
    1001103 9jm0:K (2.7) BS02 rna N/A GO:0003723 ... P23070 39395169
    1001104 9jm0:K (2.7) BS03 dna N/A GO:0003723 ... P23070 39395169
    1001105 9jm0:L (2.7) BS01 dna N/A N/A P0DV88 39395169
    1001106 9jm0:L (2.7) BS02 rna N/A N/A P0DV88 39395169
    1001107 9jm0:P (2.7) BS01 dna N/A GO:0003723 ... P23070 39395169
    1001108 9jm0:P (2.7) BS02 dna N/A GO:0003723 ... P23070 39395169
    1001109 9jm0:P (2.7) BS03 rna N/A GO:0003723 ... P23070 39395169
    1001110 9jm0:T (2.7) BS01 rna N/A N/A P0DV88 39395169
    1001111 9jm0:T (2.7) BS02 dna N/A N/A P0DV88 39395169
    1001112 9jm0:T (2.7) BS03 rna N/A N/A P0DV88 39395169
    1001113 9jm0:T (2.7) BS04 AR6 N/A N/A P0DV88 39395169
    1001114 9jm9:A (3.38) BS01 NAP N/A GO:0016491 ... C3PTT2 40406958
    1001115 9jm9:A (3.38) BS02 A1EDR N/A GO:0016491 ... C3PTT2 40406958
    1001116 9jm9:B (3.38) BS01 A1EDR N/A GO:0016491 ... C3PTT2 40406958
    1001117 9jm9:B (3.38) BS02 NAP N/A GO:0016491 ... C3PTT2 40406958
    1001118 9jma:A (2.2) BS01 UDP N/A GO:0003824 ... A0ACD6BA10 N/A
    1001119 9jma:B (2.2) BS01 UDP N/A GO:0003824 ... A0ACD6BA10 N/A
    1001120 9jmc:R (2.57) BS01 CLR N/A GO:0004930 ... O43193 39987561
    1001121 9jmc:R (2.57) BS02 A1L4H N/A GO:0004930 ... O43193 39987561
    1001122 9jmd:R (2.74) BS01 CLR N/A GO:0004930 ... O43193 39987561
    1001123 9jmd:R (2.74) BS02 ZIT N/A GO:0004930 ... O43193 39987561
    1001124 9jmf:A (3.1) BS01 EIC N/A GO:0016020 ... P10104
    U5NJG5
    40644548
    1001125 9jmf:B (3.1) BS01 EIC N/A GO:0016020 ... P10104
    U5NJG5
    40644548
    1001126 9jmf:C (3.1) BS01 EIC N/A GO:0016020 ... P10104
    U5NJG5
    40644548
    1001127 9jmf:C (3.1) BS02 EIC N/A GO:0016020 ... P10104
    U5NJG5
    40644548
    1001128 9jmg:A (3.0) BS01 EIC N/A GO:0016020 ... P10104
    U5LMM7
    40644548
    1001129 9jmg:A (3.0) BS02 EIC N/A GO:0016020 ... P10104
    U5LMM7
    40644548
    1001130 9jmg:B (3.0) BS01 EIC N/A GO:0016020 ... P10104
    U5LMM7
    40644548
    1001131 9jmg:B (3.0) BS02 EIC N/A GO:0016020 ... P10104
    U5LMM7
    40644548
    1001132 9jmg:C (3.0) BS01 EIC N/A GO:0016020 ... P10104
    U5LMM7
    40644548
    1001133 9jmg:C (3.0) BS02 EIC N/A GO:0016020 ... P10104
    U5LMM7
    40644548
    1001134 9jmh:A (3.0) BS01 EIC N/A GO:0016020 ... P10104 40644548
    1001135 9jmh:A (3.0) BS02 EIC N/A GO:0016020 ... P10104 40644548
    1001136 9jmh:B (3.0) BS01 EIC N/A GO:0016020 ... P10104 40644548
    1001137 9jmh:C (3.0) BS01 EIC N/A GO:0016020 ... P10104 40644548
    1001138 9jmh:C (3.0) BS02 EIC N/A GO:0016020 ... P10104 40644548
    1001139 9jmk:0 (4.0) BS01 rna N/A GO:0000027 ... P0A7N4 41296849
    1001140 9jmk:1 (4.0) BS01 rna N/A GO:0000027 ... P0A7N9 41296849
    1001141 9jmk:2 (4.0) BS01 rna N/A GO:0002181 ... P0A7P5 41296849
    1001142 9jmk:3 (4.0) BS01 rna N/A GO:0002181 ... P0A7Q1 41296849
    1001143 9jmk:C (4.0) BS01 rna N/A GO:0000027 ... P60422 41296849
    1001144 9jmk:D (4.0) BS01 rna N/A GO:0000027 ... P60438 41296849
    1001145 9jmk:E (4.0) BS01 rna N/A GO:0001070 ... P60723 41296849
    1001146 9jmk:F (4.0) BS01 rna N/A GO:0000027 ... P62399 41296849
    1001147 9jmk:F (4.0) BS02 rna N/A GO:0000027 ... P62399 41296849
    1001148 9jmk:G (4.0) BS01 rna N/A GO:0000027 ... P0AG55 41296849
    1001149 9jmk:H (4.0) BS01 rna N/A GO:0002181 ... P0A7R1 41296849
    1001150 9jmk:J (4.0) BS01 rna N/A GO:0002181 ... P0AA10 41296849
    1001151 9jmk:K (4.0) BS01 rna N/A GO:0002181 ... P0ADY3 41296849
    1001152 9jmk:L (4.0) BS01 rna N/A GO:0002181 ... P02413 41296849
    1001153 9jmk:N (4.0) BS01 rna N/A GO:0000027 ... P0AG44 41296849
    1001154 9jmk:O (4.0) BS01 rna N/A GO:0002181 ... P0C018 41296849
    1001155 9jmk:O (4.0) BS02 rna N/A GO:0002181 ... P0C018 41296849
    1001156 9jmk:P (4.0) BS01 rna N/A GO:0000027 ... P0A7K6 41296849
    1001157 9jmk:Q (4.0) BS01 rna N/A GO:0000027 ... P0A7L3 41296849
    1001158 9jmk:R (4.0) BS01 rna N/A GO:0002181 ... P0AG48 41296849
    1001159 9jmk:S (4.0) BS01 rna N/A GO:0002181 ... P61175 41296849
    1001160 9jmk:T (4.0) BS01 rna N/A GO:0000027 ... P0ADZ0 41296849
    1001161 9jmk:U (4.0) BS01 rna N/A GO:0000027 ... P60624 41296849
    1001162 9jmk:V (4.0) BS01 rna N/A GO:0000027 ... P68919 41296849
    1001163 9jmk:W (4.0) BS01 rna N/A GO:0000027 ... P0A7L8 41296849
    1001164 9jmk:X (4.0) BS01 rna N/A GO:0000027 ... P0A7M2 41296849
    1001165 9jmk:Y (4.0) BS01 rna N/A GO:0000027 ... P0A7M6 41296849
    1001166 9jmk:Z (4.0) BS01 rna N/A GO:0000027 ... P0AG51 41296849
    1001167 9jml:A (2.02) BS01 A1EDK N/A GO:0016491 ... C3PTT2 40406958
    1001168 9jml:A (2.02) BS02 NAP N/A GO:0016491 ... C3PTT2 40406958
    1001169 9jml:B (2.02) BS01 A1EDK N/A GO:0016491 ... C3PTT2 40406958
    1001170 9jml:B (2.02) BS02 NAP N/A GO:0016491 ... C3PTT2 40406958
    1001171 9jmm:B (2.8) BS01 MAN N/A N/A A0ACD6BAL8
    P01857
    40644548
    1001172 9jmn:A (3.8) BS01 EIC N/A GO:0016020 ... P10104 40644548
    1001173 9jmn:A (3.8) BS02 EIC N/A GO:0016020 ... P10104 40644548
    1001174 9jmn:B (3.8) BS01 EIC N/A GO:0016020 ... P10104 40644548
    1001175 9jmn:B (3.8) BS02 EIC N/A GO:0016020 ... P10104 40644548
    1001176 9jmn:C (3.8) BS01 EIC N/A GO:0016020 ... P10104 40644548
    1001177 9jmo:A (2.8) BS01 EIC N/A GO:0016020 ... P10104 40644548
    1001178 9jmo:A (2.8) BS02 EIC N/A GO:0016020 ... P10104 40644548
    1001179 9jmo:B (2.8) BS01 EIC N/A GO:0016020 ... P10104 40644548
    1001180 9jmo:C (2.8) BS01 EIC N/A GO:0016020 ... P10104 40644548
    1001181 9jmp:A (3.1) BS01 EIC N/A GO:0005515 ... A0A2R4KP93
    P10104
    40644548
    1001182 9jmp:A (3.1) BS02 EIC N/A GO:0005515 ... A0A2R4KP93
    P10104
    40644548
    1001183 9jmp:B (3.1) BS01 EIC N/A GO:0005515 ... A0A2R4KP93
    P10104
    40644548
    1001184 9jmp:B (3.1) BS02 EIC N/A GO:0005515 ... A0A2R4KP93
    P10104
    40644548
    1001185 9jmp:C (3.1) BS01 EIC N/A GO:0005515 ... A0A2R4KP93
    P10104
    40644548
    1001186 9jmp:C (3.1) BS02 EIC N/A GO:0005515 ... A0A2R4KP93
    P10104
    40644548
    1001187 9jmx:A (2.04) BS01 NAP N/A GO:0016491 ... A0A3N2GPT5 N/A
    1001188 9jmx:A (2.04) BS02 A1ECB N/A GO:0016491 ... A0A3N2GPT5 N/A
    1001189 9jmx:A (2.04) BS03 A1ECB N/A GO:0016491 ... A0A3N2GPT5 N/A
    1001190 9jmx:B (2.04) BS01 A1ECB N/A GO:0016491 ... A0A3N2GPT5 N/A
    1001191 9jmx:B (2.04) BS02 NAP N/A GO:0016491 ... A0A3N2GPT5 N/A
    1001192 9jmx:B (2.04) BS03 A1ECB N/A GO:0016491 ... A0A3N2GPT5 N/A
    1001193 9jmy:A (2.15) BS01 NDP N/A GO:0016491 ... A0A3N2GPT5 N/A
    1001194 9jmy:B (2.15) BS01 NDP N/A GO:0016491 ... A0A3N2GPT5 N/A
    1001195 9jmz:A (2.91) BS01 SIA N/A GO:0019031 ... A0A8E4ZAK5 39848246
    1001196 9jmz:B (2.91) BS01 SIA N/A GO:0019031 ... A0A8E4ZAK5 39848246
    1001197 9jmz:C (2.91) BS01 SIA N/A GO:0019031 ... A0A8E4ZAK5 39848246
    1001198 9jn0:A (2.84) BS01 SIA N/A GO:0019031 ... A0A8E4ZAK5 39848246
    1001199 9jn0:B (2.84) BS01 SIA N/A GO:0019031 ... A0A8E4ZAK5 39848246
    1001200 9jn0:C (2.84) BS01 SIA N/A GO:0019031 ... A0A8E4ZAK5 39848246

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).