SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1001801 9jpj:F (3.72) BS03 ZN N/A GO:0003700 ... A0A6N0JVZ6 41202821
    1001802 9jpj:I (3.72) BS01 dna N/A GO:0003700 ... A0A6N0JVZ6 41202821
    1001803 9jpj:I (3.72) BS02 dna N/A GO:0003700 ... A0A6N0JVZ6 41202821
    1001804 9jpj:J (3.72) BS01 dna N/A GO:0003700 ... A0A6N0JVZ6 41202821
    1001805 9jpj:J (3.72) BS02 dna N/A GO:0003700 ... A0A6N0JVZ6 41202821
    1001806 9jpj:J (3.72) BS03 ZN N/A GO:0003700 ... A0A6N0JVZ6 41202821
    1001807 9jpj:K (3.72) BS01 dna N/A GO:0003700 ... A0A6N0JVZ6 41202821
    1001808 9jpj:K (3.72) BS02 dna N/A GO:0003700 ... A0A6N0JVZ6 41202821
    1001809 9jpj:K (3.72) BS03 ZN N/A GO:0003700 ... A0A6N0JVZ6 41202821
    1001810 9jpj:L (3.72) BS01 dna N/A GO:0003700 ... A0A6N0JVZ6 41202821
    1001811 9jpj:L (3.72) BS02 dna N/A GO:0003700 ... A0A6N0JVZ6 41202821
    1001812 9jpj:L (3.72) BS03 ZN N/A GO:0003700 ... A0A6N0JVZ6 41202821
    1001813 9jpk:A (2.28) BS01 ZN N/A GO:0003700 ... A0A6N0JVZ6 41202821
    1001814 9jpk:B (2.28) BS01 ZN N/A GO:0003700 ... A0A6N0JVZ6 41202821
    1001815 9jpl:A (2.01) BS01 2HG N/A GO:0003700 ... A0A6N0JVZ6 41202821
    1001816 9jpl:A (2.01) BS02 2HG N/A GO:0003700 ... A0A6N0JVZ6 41202821
    1001817 9jpl:A (2.01) BS03 ZN N/A GO:0003700 ... A0A6N0JVZ6 41202821
    1001818 9jpl:B (2.01) BS01 2HG N/A GO:0003700 ... A0A6N0JVZ6 41202821
    1001819 9jpl:B (2.01) BS02 ZN N/A GO:0003700 ... A0A6N0JVZ6 41202821
    1001820 9jpm:0 (2.43) BS01 rna N/A N/A P0A7N9 N/A
    1001821 9jpm:1 (2.43) BS01 rna N/A N/A P0A7P5 N/A
    1001822 9jpm:2 (2.43) BS01 rna N/A N/A P0A7Q1 N/A
    1001823 9jpm:3 (2.43) BS01 rna N/A N/A P0A7Q6 N/A
    1001824 9jpm:3 (2.43) BS02 ZN N/A N/A P0A7Q6 N/A
    1001825 9jpm:4 (2.43) BS01 rna N/A N/A P0A7M9 N/A
    1001826 9jpm:4 (2.43) BS02 ZN N/A N/A P0A7M9 N/A
    1001827 9jpm:B (2.43) BS01 rna N/A N/A P0A7V0 N/A
    1001828 9jpm:C (2.43) BS01 rna N/A N/A P0A7V3 N/A
    1001829 9jpm:D (2.43) BS01 rna N/A N/A P0A7V8 N/A
    1001830 9jpm:E (2.43) BS01 rna N/A N/A P0A7W1 N/A
    1001831 9jpm:F (2.43) BS01 rna N/A N/A P02358 N/A
    1001832 9jpm:G (2.43) BS01 rna N/A N/A P02359 N/A
    1001833 9jpm:H (2.43) BS01 rna N/A N/A P0A7W7 N/A
    1001834 9jpm:I (2.43) BS01 rna N/A N/A P0A7X3 N/A
    1001835 9jpm:I (2.43) BS02 rna N/A N/A P0A7X3 N/A
    1001836 9jpm:J (2.43) BS01 rna N/A N/A P0A7R5 N/A
    1001837 9jpm:K (2.43) BS01 rna N/A N/A P0A7R9 N/A
    1001838 9jpm:L (2.43) BS01 rna N/A N/A P0A7S3 N/A
    1001839 9jpm:M (2.43) BS01 rna N/A N/A P0A7S9 N/A
    1001840 9jpm:M (2.43) BS02 rna N/A N/A P0A7S9 N/A
    1001841 9jpm:N (2.43) BS01 rna N/A N/A P0AG59 N/A
    1001842 9jpm:O (2.43) BS01 rna N/A N/A P0ADZ4 N/A
    1001843 9jpm:O (2.43) BS02 rna N/A N/A P0ADZ4 N/A
    1001844 9jpm:P (2.43) BS01 rna N/A N/A P0A7T3 N/A
    1001845 9jpm:Q (2.43) BS01 rna N/A N/A P0AG63 N/A
    1001846 9jpm:R (2.43) BS01 rna N/A N/A P0A7T7 N/A
    1001847 9jpm:S (2.43) BS01 rna N/A N/A P0A7U3 N/A
    1001848 9jpm:T (2.43) BS01 rna N/A N/A P0A7U7 N/A
    1001849 9jpm:U (2.43) BS01 rna N/A N/A P68679 N/A
    1001850 9jpm:c (2.43) BS01 rna N/A N/A P60422 N/A
    1001851 9jpm:c (2.43) BS02 rna N/A N/A P60422 N/A
    1001852 9jpm:c (2.43) BS03 MG N/A N/A P60422 N/A
    1001853 9jpm:d (2.43) BS01 rna N/A N/A P60438 N/A
    1001854 9jpm:e (2.43) BS01 rna N/A N/A P60723 N/A
    1001855 9jpm:f (2.43) BS01 rna N/A N/A P62399 N/A
    1001856 9jpm:f (2.43) BS02 rna N/A N/A P62399 N/A
    1001857 9jpm:f (2.43) BS03 rna N/A N/A P62399 N/A
    1001858 9jpm:g (2.43) BS01 rna N/A N/A P0AG55 N/A
    1001859 9jpm:h (2.43) BS01 rna N/A N/A P0A7R1 N/A
    1001860 9jpm:i (2.43) BS01 rna N/A N/A P0AA10 N/A
    1001861 9jpm:j (2.43) BS01 rna N/A N/A P0ADY3 N/A
    1001862 9jpm:j (2.43) BS02 rna N/A N/A P0ADY3 N/A
    1001863 9jpm:k (2.43) BS01 rna N/A N/A P02413 N/A
    1001864 9jpm:l (2.43) BS01 rna N/A N/A P0ADY7 N/A
    1001865 9jpm:l (2.43) BS02 rna N/A N/A P0ADY7 N/A
    1001866 9jpm:l (2.43) BS03 rna N/A N/A P0ADY7 N/A
    1001867 9jpm:m (2.43) BS01 rna N/A N/A P0AG44 N/A
    1001868 9jpm:n (2.43) BS01 rna N/A N/A P0C018 N/A
    1001869 9jpm:n (2.43) BS02 rna N/A N/A P0C018 N/A
    1001870 9jpm:o (2.43) BS01 rna N/A N/A P0A7K6 N/A
    1001871 9jpm:o (2.43) BS02 rna N/A N/A P0A7K6 N/A
    1001872 9jpm:p (2.43) BS01 rna N/A N/A P0A7L3 N/A
    1001873 9jpm:q (2.43) BS01 rna N/A N/A P0AG48 N/A
    1001874 9jpm:r (2.43) BS01 rna N/A N/A P61175 N/A
    1001875 9jpm:s (2.43) BS01 rna N/A N/A P0ADZ0 N/A
    1001876 9jpm:t (2.43) BS01 rna N/A N/A P60624 N/A
    1001877 9jpm:u (2.43) BS01 rna N/A N/A P68919 N/A
    1001878 9jpm:v (2.43) BS01 rna N/A N/A P0A7L8 N/A
    1001879 9jpm:v (2.43) BS02 rna N/A N/A P0A7L8 N/A
    1001880 9jpm:w (2.43) BS01 rna N/A N/A P0A7M2 N/A
    1001881 9jpm:x (2.43) BS01 rna N/A N/A P0A7M6 N/A
    1001882 9jpm:y (2.43) BS01 rna N/A N/A P0AG51 N/A
    1001883 9jpm:z (2.43) BS01 rna N/A N/A P0A7N4 N/A
    1001884 9jpo:0 (3.18) BS01 rna N/A N/A P0A7N9 N/A
    1001885 9jpo:1 (3.18) BS01 rna N/A N/A P0A7P5 N/A
    1001886 9jpo:2 (3.18) BS01 rna N/A N/A P0A7Q1 N/A
    1001887 9jpo:3 (3.18) BS01 rna N/A N/A P0A7Q6 N/A
    1001888 9jpo:3 (3.18) BS02 ZN N/A N/A P0A7Q6 N/A
    1001889 9jpo:4 (3.18) BS01 rna N/A N/A P0A7M9 N/A
    1001890 9jpo:4 (3.18) BS02 ZN N/A N/A P0A7M9 N/A
    1001891 9jpo:B (3.18) BS01 rna N/A N/A P0A7V0 N/A
    1001892 9jpo:C (3.18) BS01 rna N/A N/A P0A7V3 N/A
    1001893 9jpo:D (3.18) BS01 rna N/A N/A P0A7V8 N/A
    1001894 9jpo:E (3.18) BS01 rna N/A N/A P0A7W1 N/A
    1001895 9jpo:F (3.18) BS01 rna N/A N/A P02358 N/A
    1001896 9jpo:G (3.18) BS01 rna N/A N/A P02359 N/A
    1001897 9jpo:G (3.18) BS02 rna N/A N/A P02359 N/A
    1001898 9jpo:H (3.18) BS01 rna N/A N/A P0A7W7 N/A
    1001899 9jpo:I (3.18) BS01 rna N/A N/A P0A7X3 N/A
    1001900 9jpo:I (3.18) BS02 rna N/A N/A P0A7X3 N/A
    1001901 9jpo:J (3.18) BS01 rna N/A N/A P0A7R5 N/A
    1001902 9jpo:K (3.18) BS01 rna N/A N/A P0A7R9 N/A
    1001903 9jpo:L (3.18) BS01 rna N/A N/A P0A7S3 N/A
    1001904 9jpo:M (3.18) BS01 rna N/A N/A P0A7S9 N/A
    1001905 9jpo:M (3.18) BS02 rna N/A N/A P0A7S9 N/A
    1001906 9jpo:N (3.18) BS01 rna N/A N/A P0AG59 N/A
    1001907 9jpo:O (3.18) BS01 rna N/A N/A P0ADZ4 N/A
    1001908 9jpo:O (3.18) BS02 rna N/A N/A P0ADZ4 N/A
    1001909 9jpo:P (3.18) BS01 rna N/A N/A P0A7T3 N/A
    1001910 9jpo:Q (3.18) BS01 rna N/A N/A P0AG63 N/A
    1001911 9jpo:R (3.18) BS01 rna N/A N/A P0A7T7 N/A
    1001912 9jpo:S (3.18) BS01 rna N/A N/A P0A7U3 N/A
    1001913 9jpo:T (3.18) BS01 rna N/A N/A P0A7U7 N/A
    1001914 9jpo:U (3.18) BS01 rna N/A N/A P68679 N/A
    1001915 9jpo:c (3.18) BS01 rna N/A N/A P60422 N/A
    1001916 9jpo:d (3.18) BS01 rna N/A N/A P60438 N/A
    1001917 9jpo:e (3.18) BS01 rna N/A N/A P60723 N/A
    1001918 9jpo:f (3.18) BS01 rna N/A N/A P62399 N/A
    1001919 9jpo:f (3.18) BS02 rna N/A N/A P62399 N/A
    1001920 9jpo:f (3.18) BS03 rna N/A N/A P62399 N/A
    1001921 9jpo:g (3.18) BS01 rna N/A N/A P0AG55 N/A
    1001922 9jpo:h (3.18) BS01 rna N/A N/A P0A7R1 N/A
    1001923 9jpo:i (3.18) BS01 rna N/A N/A P0AA10 N/A
    1001924 9jpo:j (3.18) BS01 rna N/A N/A P0ADY3 N/A
    1001925 9jpo:j (3.18) BS02 rna N/A N/A P0ADY3 N/A
    1001926 9jpo:k (3.18) BS01 rna N/A N/A P02413 N/A
    1001927 9jpo:l (3.18) BS01 rna N/A N/A P0ADY7 N/A
    1001928 9jpo:l (3.18) BS02 rna N/A N/A P0ADY7 N/A
    1001929 9jpo:l (3.18) BS03 rna N/A N/A P0ADY7 N/A
    1001930 9jpo:m (3.18) BS01 rna N/A N/A P0AG44 N/A
    1001931 9jpo:n (3.18) BS01 rna N/A N/A P0C018 N/A
    1001932 9jpo:n (3.18) BS02 rna N/A N/A P0C018 N/A
    1001933 9jpo:o (3.18) BS01 rna N/A N/A P0A7K6 N/A
    1001934 9jpo:o (3.18) BS02 rna N/A N/A P0A7K6 N/A
    1001935 9jpo:p (3.18) BS01 rna N/A N/A P0A7L3 N/A
    1001936 9jpo:q (3.18) BS01 rna N/A N/A P0AG48 N/A
    1001937 9jpo:r (3.18) BS01 rna N/A N/A P61175 N/A
    1001938 9jpo:s (3.18) BS01 rna N/A N/A P0ADZ0 N/A
    1001939 9jpo:t (3.18) BS01 rna N/A N/A P60624 N/A
    1001940 9jpo:u (3.18) BS01 rna N/A N/A P68919 N/A
    1001941 9jpo:v (3.18) BS01 rna N/A N/A P0A7L8 N/A
    1001942 9jpo:w (3.18) BS01 rna N/A N/A P0A7M2 N/A
    1001943 9jpo:x (3.18) BS01 rna N/A N/A P0A7M6 N/A
    1001944 9jpo:y (3.18) BS01 rna N/A N/A P0AG51 N/A
    1001945 9jpo:z (3.18) BS01 rna N/A N/A P0A7N4 N/A
    1001946 9jpp:0 (2.26) BS01 rna N/A N/A P0A7N9 N/A
    1001947 9jpp:1 (2.26) BS01 rna N/A N/A P0A7P5 N/A
    1001948 9jpp:2 (2.26) BS01 rna N/A N/A P0A7Q1 N/A
    1001949 9jpp:3 (2.26) BS01 rna N/A N/A P0A7Q6 N/A
    1001950 9jpp:3 (2.26) BS02 ZN N/A N/A P0A7Q6 N/A
    1001951 9jpp:4 (2.26) BS01 rna N/A N/A P0A7M9 N/A
    1001952 9jpp:4 (2.26) BS02 ZN N/A N/A P0A7M9 N/A
    1001953 9jpp:B (2.26) BS01 rna N/A N/A P0A7V0 N/A
    1001954 9jpp:C (2.26) BS01 rna N/A N/A P0A7V3 N/A
    1001955 9jpp:D (2.26) BS01 rna N/A N/A P0A7V8 N/A
    1001956 9jpp:E (2.26) BS01 rna N/A N/A P0A7W1 N/A
    1001957 9jpp:F (2.26) BS01 rna N/A N/A P02358 N/A
    1001958 9jpp:G (2.26) BS01 rna N/A N/A P02359 N/A
    1001959 9jpp:H (2.26) BS01 rna N/A N/A P0A7W7 N/A
    1001960 9jpp:I (2.26) BS01 rna N/A N/A P0A7X3 N/A
    1001961 9jpp:I (2.26) BS02 rna N/A N/A P0A7X3 N/A
    1001962 9jpp:J (2.26) BS01 rna N/A N/A P0A7R5 N/A
    1001963 9jpp:K (2.26) BS01 rna N/A N/A P0A7R9 N/A
    1001964 9jpp:L (2.26) BS01 rna N/A N/A P0A7S3 N/A
    1001965 9jpp:M (2.26) BS01 rna N/A N/A P0A7S9 N/A
    1001966 9jpp:M (2.26) BS02 rna N/A N/A P0A7S9 N/A
    1001967 9jpp:N (2.26) BS01 rna N/A N/A P0AG59 N/A
    1001968 9jpp:O (2.26) BS01 rna N/A N/A P0ADZ4 N/A
    1001969 9jpp:O (2.26) BS02 rna N/A N/A P0ADZ4 N/A
    1001970 9jpp:P (2.26) BS01 rna N/A N/A P0A7T3 N/A
    1001971 9jpp:Q (2.26) BS01 rna N/A N/A P0AG63 N/A
    1001972 9jpp:R (2.26) BS01 rna N/A N/A P0A7T7 N/A
    1001973 9jpp:S (2.26) BS01 rna N/A N/A P0A7U3 N/A
    1001974 9jpp:T (2.26) BS01 rna N/A N/A P0A7U7 N/A
    1001975 9jpp:U (2.26) BS01 rna N/A N/A P68679 N/A
    1001976 9jpp:c (2.26) BS01 rna N/A N/A P60422 N/A
    1001977 9jpp:d (2.26) BS01 rna N/A N/A P60438 N/A
    1001978 9jpp:e (2.26) BS01 rna N/A N/A P60723 N/A
    1001979 9jpp:f (2.26) BS01 rna N/A N/A P62399 N/A
    1001980 9jpp:f (2.26) BS02 rna N/A N/A P62399 N/A
    1001981 9jpp:f (2.26) BS03 rna N/A N/A P62399 N/A
    1001982 9jpp:g (2.26) BS01 rna N/A N/A P0AG55 N/A
    1001983 9jpp:h (2.26) BS01 rna N/A N/A P0A7R1 N/A
    1001984 9jpp:i (2.26) BS01 rna N/A N/A P0AA10 N/A
    1001985 9jpp:j (2.26) BS01 rna N/A N/A P0ADY3 N/A
    1001986 9jpp:j (2.26) BS02 rna N/A N/A P0ADY3 N/A
    1001987 9jpp:k (2.26) BS01 rna N/A N/A P02413 N/A
    1001988 9jpp:l (2.26) BS01 rna N/A N/A P0ADY7 N/A
    1001989 9jpp:l (2.26) BS02 rna N/A N/A P0ADY7 N/A
    1001990 9jpp:l (2.26) BS03 rna N/A N/A P0ADY7 N/A
    1001991 9jpp:m (2.26) BS01 rna N/A N/A P0AG44 N/A
    1001992 9jpp:n (2.26) BS01 rna N/A N/A P0C018 N/A
    1001993 9jpp:n (2.26) BS02 rna N/A N/A P0C018 N/A
    1001994 9jpp:o (2.26) BS01 rna N/A N/A P0A7K6 N/A
    1001995 9jpp:o (2.26) BS02 rna N/A N/A P0A7K6 N/A
    1001996 9jpp:p (2.26) BS01 rna N/A N/A P0A7L3 N/A
    1001997 9jpp:q (2.26) BS01 rna N/A N/A P0AG48 N/A
    1001998 9jpp:r (2.26) BS01 rna N/A N/A P61175 N/A
    1001999 9jpp:s (2.26) BS01 rna N/A N/A P0ADZ0 N/A
    1002000 9jpp:t (2.26) BS01 rna N/A N/A P60624 N/A
    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).