SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1002401 9jsi:B (3.35) BS01 CA N/A GO:0005576 ... Q46221 N/A
    1002402 9jsi:B (3.35) BS02 CA N/A GO:0005576 ... Q46221 N/A
    1002403 9jsi:B (3.35) BS03 CA N/A GO:0005576 ... Q46221 N/A
    1002404 9jsi:C (3.35) BS01 CA N/A GO:0005576 ... Q46221 N/A
    1002405 9jsi:C (3.35) BS02 CA N/A GO:0005576 ... Q46221 N/A
    1002406 9jsi:C (3.35) BS03 CA N/A GO:0005576 ... Q46221 N/A
    1002407 9jsi:D (3.35) BS01 CA N/A GO:0005576 ... Q46221 N/A
    1002408 9jsi:D (3.35) BS02 CA N/A GO:0005576 ... Q46221 N/A
    1002409 9jsi:D (3.35) BS03 CA N/A GO:0005576 ... Q46221 N/A
    1002410 9jsi:E (3.35) BS01 CA N/A GO:0005576 ... Q46221 N/A
    1002411 9jsi:E (3.35) BS02 CA N/A GO:0005576 ... Q46221 N/A
    1002412 9jsi:E (3.35) BS03 CA N/A GO:0005576 ... Q46221 N/A
    1002413 9jsi:F (3.35) BS01 CA N/A GO:0005576 ... Q46221 N/A
    1002414 9jsi:F (3.35) BS02 CA N/A GO:0005576 ... Q46221 N/A
    1002415 9jsi:F (3.35) BS03 CA N/A GO:0005576 ... Q46221 N/A
    1002416 9jsi:G (3.35) BS01 CA N/A GO:0005576 ... Q46221 N/A
    1002417 9jsi:G (3.35) BS02 CA N/A GO:0005576 ... Q46221 N/A
    1002418 9jsi:G (3.35) BS03 CA N/A GO:0005576 ... Q46221 N/A
    1002419 9jsk:A (3.57) BS01 CA N/A GO:0005576 ... Q46221 N/A
    1002420 9jsk:A (3.57) BS02 CA N/A GO:0005576 ... Q46221 N/A
    1002421 9jsk:A (3.57) BS03 CA N/A GO:0005576 ... Q46221 N/A
    1002422 9jsk:B (3.57) BS01 CA N/A GO:0005576 ... Q46221 N/A
    1002423 9jsk:B (3.57) BS02 CA N/A GO:0005576 ... Q46221 N/A
    1002424 9jsk:B (3.57) BS03 CA N/A GO:0005576 ... Q46221 N/A
    1002425 9jsk:C (3.57) BS01 CA N/A GO:0005576 ... Q46221 N/A
    1002426 9jsk:C (3.57) BS02 CA N/A GO:0005576 ... Q46221 N/A
    1002427 9jsk:C (3.57) BS03 CA N/A GO:0005576 ... Q46221 N/A
    1002428 9jsk:D (3.57) BS01 CA N/A GO:0005576 ... Q46221 N/A
    1002429 9jsk:D (3.57) BS02 CA N/A GO:0005576 ... Q46221 N/A
    1002430 9jsk:D (3.57) BS03 CA N/A GO:0005576 ... Q46221 N/A
    1002431 9jsk:E (3.57) BS01 CA N/A GO:0005576 ... Q46221 N/A
    1002432 9jsk:E (3.57) BS02 CA N/A GO:0005576 ... Q46221 N/A
    1002433 9jsk:E (3.57) BS03 CA N/A GO:0005576 ... Q46221 N/A
    1002434 9jsk:F (3.57) BS01 CA N/A GO:0005576 ... Q46221 N/A
    1002435 9jsk:F (3.57) BS02 CA N/A GO:0005576 ... Q46221 N/A
    1002436 9jsk:F (3.57) BS03 CA N/A GO:0005576 ... Q46221 N/A
    1002437 9jsk:G (3.57) BS01 CA N/A GO:0005576 ... Q46221 N/A
    1002438 9jsk:G (3.57) BS02 CA N/A GO:0005576 ... Q46221 N/A
    1002439 9jsk:G (3.57) BS03 CA N/A GO:0005576 ... Q46221 N/A
    1002440 9jsl:A (3.59) BS01 CA N/A GO:0005576 ... Q46221 N/A
    1002441 9jsl:A (3.59) BS02 CA N/A GO:0005576 ... Q46221 N/A
    1002442 9jsl:A (3.59) BS03 CA N/A GO:0005576 ... Q46221 N/A
    1002443 9jsl:B (3.59) BS01 CA N/A GO:0005576 ... Q46221 N/A
    1002444 9jsl:B (3.59) BS02 CA N/A GO:0005576 ... Q46221 N/A
    1002445 9jsl:B (3.59) BS03 CA N/A GO:0005576 ... Q46221 N/A
    1002446 9jsl:C (3.59) BS01 CA N/A GO:0005576 ... Q46221 N/A
    1002447 9jsl:C (3.59) BS02 CA N/A GO:0005576 ... Q46221 N/A
    1002448 9jsl:C (3.59) BS03 CA N/A GO:0005576 ... Q46221 N/A
    1002449 9jsl:D (3.59) BS01 CA N/A GO:0005576 ... Q46221 N/A
    1002450 9jsl:D (3.59) BS02 CA N/A GO:0005576 ... Q46221 N/A
    1002451 9jsl:D (3.59) BS03 CA N/A GO:0005576 ... Q46221 N/A
    1002452 9jsl:E (3.59) BS01 CA N/A GO:0005576 ... Q46221 N/A
    1002453 9jsl:E (3.59) BS02 CA N/A GO:0005576 ... Q46221 N/A
    1002454 9jsl:E (3.59) BS03 CA N/A GO:0005576 ... Q46221 N/A
    1002455 9jsl:F (3.59) BS01 CA N/A GO:0005576 ... Q46221 N/A
    1002456 9jsl:F (3.59) BS02 CA N/A GO:0005576 ... Q46221 N/A
    1002457 9jsl:F (3.59) BS03 CA N/A GO:0005576 ... Q46221 N/A
    1002458 9jsl:G (3.59) BS01 CA N/A GO:0005576 ... Q46221 N/A
    1002459 9jsl:G (3.59) BS02 CA N/A GO:0005576 ... Q46221 N/A
    1002460 9jsl:G (3.59) BS03 CA N/A GO:0005576 ... Q46221 N/A
    1002461 9jsm:A (3.73) BS01 CA N/A GO:0005576 ... Q46221 N/A
    1002462 9jsm:A (3.73) BS02 CA N/A GO:0005576 ... Q46221 N/A
    1002463 9jsm:A (3.73) BS03 CA N/A GO:0005576 ... Q46221 N/A
    1002464 9jsm:B (3.73) BS01 CA N/A GO:0005576 ... Q46221 N/A
    1002465 9jsm:B (3.73) BS02 CA N/A GO:0005576 ... Q46221 N/A
    1002466 9jsm:B (3.73) BS03 CA N/A GO:0005576 ... Q46221 N/A
    1002467 9jsm:C (3.73) BS01 CA N/A GO:0005576 ... Q46221 N/A
    1002468 9jsm:C (3.73) BS02 CA N/A GO:0005576 ... Q46221 N/A
    1002469 9jsm:C (3.73) BS03 CA N/A GO:0005576 ... Q46221 N/A
    1002470 9jsm:D (3.73) BS01 CA N/A GO:0005576 ... Q46221 N/A
    1002471 9jsm:D (3.73) BS02 CA N/A GO:0005576 ... Q46221 N/A
    1002472 9jsm:D (3.73) BS03 CA N/A GO:0005576 ... Q46221 N/A
    1002473 9jsm:E (3.73) BS01 CA N/A GO:0005576 ... Q46221 N/A
    1002474 9jsm:E (3.73) BS02 CA N/A GO:0005576 ... Q46221 N/A
    1002475 9jsm:E (3.73) BS03 CA N/A GO:0005576 ... Q46221 N/A
    1002476 9jsm:F (3.73) BS01 CA N/A GO:0005576 ... Q46221 N/A
    1002477 9jsm:F (3.73) BS02 CA N/A GO:0005576 ... Q46221 N/A
    1002478 9jsm:F (3.73) BS03 CA N/A GO:0005576 ... Q46221 N/A
    1002479 9jsm:G (3.73) BS01 CA N/A GO:0005576 ... Q46221 N/A
    1002480 9jsm:G (3.73) BS02 CA N/A GO:0005576 ... Q46221 N/A
    1002481 9jsm:G (3.73) BS03 CA N/A GO:0005576 ... Q46221 N/A
    1002482 9jsn:A (3.73) BS01 CA N/A GO:0005576 ... Q46221 N/A
    1002483 9jsn:A (3.73) BS02 CA N/A GO:0005576 ... Q46221 N/A
    1002484 9jsn:A (3.73) BS03 CA N/A GO:0005576 ... Q46221 N/A
    1002485 9jsn:B (3.73) BS01 CA N/A GO:0005576 ... Q46221 N/A
    1002486 9jsn:B (3.73) BS02 CA N/A GO:0005576 ... Q46221 N/A
    1002487 9jsn:B (3.73) BS03 CA N/A GO:0005576 ... Q46221 N/A
    1002488 9jsn:C (3.73) BS01 CA N/A GO:0005576 ... Q46221 N/A
    1002489 9jsn:C (3.73) BS02 CA N/A GO:0005576 ... Q46221 N/A
    1002490 9jsn:C (3.73) BS03 CA N/A GO:0005576 ... Q46221 N/A
    1002491 9jsn:D (3.73) BS01 CA N/A GO:0005576 ... Q46221 N/A
    1002492 9jsn:D (3.73) BS02 CA N/A GO:0005576 ... Q46221 N/A
    1002493 9jsn:D (3.73) BS03 CA N/A GO:0005576 ... Q46221 N/A
    1002494 9jsn:E (3.73) BS01 CA N/A GO:0005576 ... Q46221 N/A
    1002495 9jsn:E (3.73) BS02 CA N/A GO:0005576 ... Q46221 N/A
    1002496 9jsn:E (3.73) BS03 CA N/A GO:0005576 ... Q46221 N/A
    1002497 9jsn:F (3.73) BS01 CA N/A GO:0005576 ... Q46221 N/A
    1002498 9jsn:F (3.73) BS02 CA N/A GO:0005576 ... Q46221 N/A
    1002499 9jsn:F (3.73) BS03 CA N/A GO:0005576 ... Q46221 N/A
    1002500 9jsn:G (3.73) BS01 CA N/A GO:0005576 ... Q46221 N/A
    1002501 9jsn:G (3.73) BS02 CA N/A GO:0005576 ... Q46221 N/A
    1002502 9jsn:G (3.73) BS03 CA N/A GO:0005576 ... Q46221 N/A
    1002503 9jso:A (2.9) BS01 CA N/A GO:0005576 ... Q46221 N/A
    1002504 9jso:A (2.9) BS02 CA N/A GO:0005576 ... Q46221 N/A
    1002505 9jso:A (2.9) BS03 CA N/A GO:0005576 ... Q46221 N/A
    1002506 9jsp:A (3.34) BS01 rna N/A GO:0003676 ... A0A1L3JCL0 40122999
    1002507 9jsp:A (3.34) BS02 dna N/A GO:0003676 ... A0A1L3JCL0 40122999
    1002508 9jsp:A (3.34) BS03 MG N/A GO:0003676 ... A0A1L3JCL0 40122999
    1002509 9jsq:A (2.45) BS01 FES N/A GO:0003824 ... Q9LIR4 39494391
    1002510 9jsr:0 (4.0) BS01 rna N/A GO:0000027 ... P0A7N4 41296849
    1002511 9jsr:2 (4.0) BS01 rna N/A GO:0002181 ... P0A7P5 41296849
    1002512 9jsr:C (4.0) BS01 rna N/A GO:0000154 ... P13956 41296849
    1002513 9jsr:C (4.0) BS02 AN6 N/A GO:0000154 ... P13956 41296849
    1002514 9jsr:D (4.0) BS01 rna N/A GO:0000027 ... P60438 41296849
    1002515 9jsr:E (4.0) BS01 rna N/A GO:0001070 ... P60723 41296849
    1002516 9jsr:J (4.0) BS01 rna N/A GO:0002181 ... P0AA10 41296849
    1002517 9jsr:K (4.0) BS01 rna N/A GO:0002181 ... P0ADY3 41296849
    1002518 9jsr:L (4.0) BS01 rna N/A GO:0002181 ... P02413 41296849
    1002519 9jsr:N (4.0) BS01 rna N/A GO:0000027 ... P0AG44 41296849
    1002520 9jsr:P (4.0) BS01 rna N/A GO:0000027 ... P0A7K6 41296849
    1002521 9jsr:Q (4.0) BS01 rna N/A GO:0000027 ... P0A7L3 41296849
    1002522 9jsr:R (4.0) BS01 rna N/A GO:0002181 ... P0AG48 41296849
    1002523 9jsr:S (4.0) BS01 rna N/A GO:0002181 ... P61175 41296849
    1002524 9jsr:T (4.0) BS01 rna N/A GO:0000027 ... P0ADZ0 41296849
    1002525 9jsr:U (4.0) BS01 rna N/A GO:0000027 ... P60624 41296849
    1002526 9jsr:Y (4.0) BS01 rna N/A GO:0000027 ... P0A7M6 41296849
    1002527 9jsr:Z (4.0) BS01 rna N/A GO:0000027 ... P0AG51 41296849
    1002528 9jss:A (1.39) BS01 MTA N/A GO:0003824 ... Q9YAQ8 N/A
    1002529 9jsy:A (2.0) BS01 A1ECY N/A GO:0016491 ... O25465 40089858
    1002530 9jsy:A (2.0) BS02 FMN N/A GO:0016491 ... O25465 40089858
    1002531 9jsy:A (2.0) BS03 SF4 N/A GO:0016491 ... O25465 40089858
    1002532 9jsy:A (2.0) BS04 MG N/A GO:0016491 ... O25465 40089858
    1002533 9jsz:A (3.18) BS01 rna N/A GO:0003676 ... A0A1L3JCL0 40122999
    1002534 9jsz:A (3.18) BS02 dna N/A GO:0003676 ... A0A1L3JCL0 40122999
    1002535 9jsz:B (3.18) BS01 rna N/A N/A A0A1L3JCN1 40122999
    1002536 9jsz:B (3.18) BS02 dna N/A N/A A0A1L3JCN1 40122999
    1002537 9jsz:E (3.18) BS01 dna N/A GO:0003676 ... A0A1L3JCL0 40122999
    1002538 9jsz:E (3.18) BS02 rna N/A GO:0003676 ... A0A1L3JCL0 40122999
    1002539 9jsz:F (3.18) BS01 dna N/A N/A A0A1L3JCN1 40122999
    1002540 9jsz:F (3.18) BS02 rna N/A N/A A0A1L3JCN1 40122999
    1002541 9jsz:I (3.18) BS01 dna N/A GO:0003676 ... A0A1L3JCL0 40122999
    1002542 9jsz:I (3.18) BS02 rna N/A GO:0003676 ... A0A1L3JCL0 40122999
    1002543 9jsz:I (3.18) BS03 MG N/A GO:0003676 ... A0A1L3JCL0 40122999
    1002544 9jsz:J (3.18) BS01 dna N/A N/A A0A1L3JCN1 40122999
    1002545 9jsz:J (3.18) BS02 rna N/A N/A A0A1L3JCN1 40122999
    1002546 9jsz:M (3.18) BS01 dna N/A GO:0003676 ... A0A1L3JCL0 40122999
    1002547 9jsz:M (3.18) BS02 rna N/A GO:0003676 ... A0A1L3JCL0 40122999
    1002548 9jsz:M (3.18) BS03 MG N/A GO:0003676 ... A0A1L3JCL0 40122999
    1002549 9jsz:N (3.18) BS01 dna N/A N/A A0A1L3JCN1 40122999
    1002550 9jsz:N (3.18) BS02 rna N/A N/A A0A1L3JCN1 40122999
    1002551 9jt0:A (2.4) BS01 ZN N/A GO:0004553 ... A7MSF4 40835009
    1002552 9jt0:B (2.4) BS01 ZN N/A GO:0004553 ... A7MSF4 40835009
    1002553 9jt0:C (2.4) BS01 ZN N/A GO:0004553 ... A7MSF4 40835009
    1002554 9jt2:A (3.19) BS01 rna N/A GO:0003676 ... A0A1L3JCL0 40122999
    1002555 9jt2:A (3.19) BS02 dna N/A GO:0003676 ... A0A1L3JCL0 40122999
    1002556 9jt2:A (3.19) BS03 MG N/A GO:0003676 ... A0A1L3JCL0 40122999
    1002557 9jt2:B (3.19) BS01 rna N/A N/A A0A1L3JCN1 40122999
    1002558 9jt2:B (3.19) BS02 dna N/A N/A A0A1L3JCN1 40122999
    1002559 9jt2:B (3.19) BS03 dna N/A N/A A0A1L3JCN1 40122999
    1002560 9jt2:E (3.19) BS01 rna N/A GO:0003676 ... A0A1L3JCL0 40122999
    1002561 9jt2:E (3.19) BS02 dna N/A GO:0003676 ... A0A1L3JCL0 40122999
    1002562 9jt2:E (3.19) BS03 MG N/A GO:0003676 ... A0A1L3JCL0 40122999
    1002563 9jt2:F (3.19) BS01 rna N/A N/A A0A1L3JCN1 40122999
    1002564 9jt2:F (3.19) BS02 dna N/A N/A A0A1L3JCN1 40122999
    1002565 9jt2:F (3.19) BS03 dna N/A N/A A0A1L3JCN1 40122999
    1002566 9jt2:F (3.19) BS04 dna N/A N/A A0A1L3JCN1 40122999
    1002567 9jt2:F (3.19) BS05 MG N/A N/A A0A1L3JCN1 40122999
    1002568 9jt2:I (3.19) BS01 rna N/A GO:0003676 ... A0A1L3JCL0 40122999
    1002569 9jt2:I (3.19) BS02 dna N/A GO:0003676 ... A0A1L3JCL0 40122999
    1002570 9jt2:I (3.19) BS03 MG N/A GO:0003676 ... A0A1L3JCL0 40122999
    1002571 9jt2:J (3.19) BS01 rna N/A N/A A0A1L3JCN1 40122999
    1002572 9jt2:J (3.19) BS02 dna N/A N/A A0A1L3JCN1 40122999
    1002573 9jt2:M (3.19) BS01 rna N/A GO:0003676 ... A0A1L3JCL0 40122999
    1002574 9jt2:M (3.19) BS02 dna N/A GO:0003676 ... A0A1L3JCL0 40122999
    1002575 9jt2:N (3.19) BS01 dna N/A N/A A0A1L3JCN1 40122999
    1002576 9jt4:A (1.64) BS01 NAP N/A GO:0001523 ... P42330 N/A
    1002577 9jt4:A (1.64) BS02 A1EC0 N/A GO:0001523 ... P42330 N/A
    1002578 9jt4:B (1.64) BS01 NAP N/A GO:0001523 ... P42330 N/A
    1002579 9jt4:B (1.64) BS02 A1EC0 N/A GO:0001523 ... P42330 N/A
    1002580 9jt5:A (1.62) BS01 NAP N/A GO:0001523 ... P42330 N/A
    1002581 9jt5:A (1.62) BS02 A1EC3 N/A GO:0001523 ... P42330 N/A
    1002582 9jt5:B (1.62) BS01 NAP N/A GO:0001523 ... P42330 N/A
    1002583 9jt5:B (1.62) BS02 A1EC3 N/A GO:0001523 ... P42330 N/A
    1002584 9jt6:A (1.74) BS01 NAP N/A GO:0001523 ... P42330 N/A
    1002585 9jt6:A (1.74) BS02 A1EC4 N/A GO:0001523 ... P42330 N/A
    1002586 9jt6:B (1.74) BS01 NAP N/A GO:0001523 ... P42330 N/A
    1002587 9jt6:B (1.74) BS02 A1EC4 N/A GO:0001523 ... P42330 N/A
    1002588 9jt7:A (2.3) BS01 PLP N/A GO:0003824 ... P94494 39733140
    1002589 9jt7:B (2.3) BS01 ALA N/A GO:0003824 ... P94494 39733140
    1002590 9jt7:B (2.3) BS02 PLP N/A GO:0003824 ... P94494 39733140
    1002591 9jt7:C (2.3) BS01 PLP N/A GO:0003824 ... P94494 39733140
    1002592 9jt7:C (2.3) BS02 ALA N/A GO:0003824 ... P94494 39733140
    1002593 9jt7:D (2.3) BS01 ALA N/A GO:0003824 ... P94494 39733140
    1002594 9jt7:D (2.3) BS02 ALA N/A GO:0003824 ... P94494 39733140
    1002595 9jt7:D (2.3) BS03 PLP N/A GO:0003824 ... P94494 39733140
    1002596 9jt8:A (2.85) BS01 GCS N/A GO:0004553 ... A7MSF4 40835009
    1002597 9jt8:A (2.85) BS02 ZN N/A GO:0004553 ... A7MSF4 40835009
    1002598 9jt8:B (2.85) BS01 GCS N/A GO:0004553 ... A7MSF4 40835009
    1002599 9jt8:B (2.85) BS02 ZN N/A GO:0004553 ... A7MSF4 40835009
    1002600 9jt8:C (2.85) BS01 GCS N/A GO:0004553 ... A7MSF4 40835009

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).