SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1003001 9jyz:s (2.7) BS01 peptide N/A GO:0019028 ... P03728 39704524
    1003002 9jyz:s (2.7) BS02 peptide N/A GO:0019028 ... P03728 39704524
    1003003 9jyz:s (2.7) BS03 peptide N/A GO:0019028 ... P03728 39704524
    1003004 9jyz:t (2.7) BS01 peptide N/A GO:0019028 ... P03728 39704524
    1003005 9jyz:t (2.7) BS02 peptide N/A GO:0019028 ... P03728 39704524
    1003006 9jyz:t (2.7) BS03 peptide N/A GO:0019028 ... P03728 39704524
    1003007 9jyz:u (2.7) BS01 peptide N/A GO:0019028 ... P03728 39704524
    1003008 9jyz:u (2.7) BS02 peptide N/A GO:0019028 ... P03728 39704524
    1003009 9jyz:u (2.7) BS03 peptide N/A GO:0019028 ... P03728 39704524
    1003010 9jyz:x (2.7) BS01 peptide N/A GO:0046718 ... P03747 39704524
    1003011 9jyz:x (2.7) BS02 peptide N/A GO:0046718 ... P03747 39704524
    1003012 9jz1:A (2.402) BS01 PO4 N/A GO:0005548 ... O35954 41129229
    1003013 9jz2:A (1.55) BS01 A1ED3 N/A GO:0000413 ... Q13526 40803165
    1003014 9jz2:A (1.55) BS02 A1ED3 N/A GO:0000413 ... Q13526 40803165
    1003015 9jz3:A (1.98) BS01 A1ED4 N/A GO:0000413 ... Q13526 40803165
    1003016 9jz4:A (1.82) BS01 A1ED5 N/A GO:0000413 ... Q13526 40803165
    1003017 9jz6:A (1.65) BS01 A1ED7 N/A GO:0000413 ... Q13526 40803165
    1003018 9jz7:A (1.79) BS01 MN N/A GO:0008299 ... O96693 39795129
    1003019 9jz7:A (1.79) BS02 A1L4W N/A GO:0008299 ... O96693 39795129
    1003020 9jz7:B (1.79) BS01 MN N/A GO:0008299 ... O96693 39795129
    1003021 9jz7:B (1.79) BS02 A1L4W N/A GO:0008299 ... O96693 39795129
    1003022 9jz7:B (1.79) BS03 CA N/A GO:0008299 ... O96693 39795129
    1003023 9jz7:B (1.79) BS04 CA N/A GO:0008299 ... O96693 39795129
    1003024 9jz8:A (1.53) BS01 NDP N/A GO:0008299 ... O96693 39795129
    1003025 9jz8:A (1.53) BS02 MN N/A GO:0008299 ... O96693 39795129
    1003026 9jz8:A (1.53) BS03 A1L4W N/A GO:0008299 ... O96693 39795129
    1003027 9jz8:B (1.53) BS01 NDP N/A GO:0008299 ... O96693 39795129
    1003028 9jz8:B (1.53) BS02 MN N/A GO:0008299 ... O96693 39795129
    1003029 9jz8:B (1.53) BS03 A1L4W N/A GO:0008299 ... O96693 39795129
    1003030 9jz8:B (1.53) BS04 CA N/A GO:0008299 ... O96693 39795129
    1003031 9jz8:B (1.53) BS05 CA N/A GO:0008299 ... O96693 39795129
    1003032 9jz9:A (1.33) BS01 MN N/A GO:0008299 ... O96693 39795129
    1003033 9jz9:A (1.33) BS02 A1L41 N/A GO:0008299 ... O96693 39795129
    1003034 9jz9:B (1.33) BS01 MN N/A GO:0008299 ... O96693 39795129
    1003035 9jz9:B (1.33) BS02 A1L41 N/A GO:0008299 ... O96693 39795129
    1003036 9jz9:B (1.33) BS03 CA N/A GO:0008299 ... O96693 39795129
    1003037 9jz9:B (1.33) BS04 CA N/A GO:0008299 ... O96693 39795129
    1003038 9jza:A (1.55) BS01 NDP N/A GO:0008299 ... O96693 39795129
    1003039 9jza:A (1.55) BS02 MN N/A GO:0008299 ... O96693 39795129
    1003040 9jza:A (1.55) BS03 A1L41 N/A GO:0008299 ... O96693 39795129
    1003041 9jza:B (1.55) BS01 NDP N/A GO:0008299 ... O96693 39795129
    1003042 9jza:B (1.55) BS02 MN N/A GO:0008299 ... O96693 39795129
    1003043 9jza:B (1.55) BS03 A1L41 N/A GO:0008299 ... O96693 39795129
    1003044 9jza:B (1.55) BS04 CA N/A GO:0008299 ... O96693 39795129
    1003045 9jza:B (1.55) BS05 CA N/A GO:0008299 ... O96693 39795129
    1003046 9jzb:A (1.47) BS01 MN N/A GO:0008299 ... O96693 39795129
    1003047 9jzb:A (1.47) BS02 A1L43 N/A GO:0008299 ... O96693 39795129
    1003048 9jzb:B (1.47) BS01 MN N/A GO:0008299 ... O96693 39795129
    1003049 9jzb:B (1.47) BS02 A1L43 N/A GO:0008299 ... O96693 39795129
    1003050 9jzb:B (1.47) BS03 CA N/A GO:0008299 ... O96693 39795129
    1003051 9jzb:B (1.47) BS04 CA N/A GO:0008299 ... O96693 39795129
    1003052 9jzc:A (1.77) BS01 NDP N/A GO:0008299 ... O96693 39795129
    1003053 9jzc:A (1.77) BS02 MN N/A GO:0008299 ... O96693 39795129
    1003054 9jzc:A (1.77) BS03 A1L43 N/A GO:0008299 ... O96693 39795129
    1003055 9jzc:B (1.77) BS01 NDP N/A GO:0008299 ... O96693 39795129
    1003056 9jzc:B (1.77) BS02 MN N/A GO:0008299 ... O96693 39795129
    1003057 9jzc:B (1.77) BS03 A1L43 N/A GO:0008299 ... O96693 39795129
    1003058 9jzc:B (1.77) BS04 CA N/A GO:0008299 ... O96693 39795129
    1003059 9jzc:B (1.77) BS05 CA N/A GO:0008299 ... O96693 39795129
    1003060 9jzd:A (1.65) BS01 NDP N/A GO:0008299 ... O96693 39795129
    1003061 9jzd:A (1.65) BS02 MN N/A GO:0008299 ... O96693 39795129
    1003062 9jzd:A (1.65) BS03 A1L44 N/A GO:0008299 ... O96693 39795129
    1003063 9jzd:B (1.65) BS01 NDP N/A GO:0008299 ... O96693 39795129
    1003064 9jzd:B (1.65) BS02 MN N/A GO:0008299 ... O96693 39795129
    1003065 9jzd:B (1.65) BS03 A1L44 N/A GO:0008299 ... O96693 39795129
    1003066 9jzd:B (1.65) BS04 CA N/A GO:0008299 ... O96693 39795129
    1003067 9jzd:B (1.65) BS05 CA N/A GO:0008299 ... O96693 39795129
    1003068 9jze:A (1.84) BS01 NDP N/A GO:0008299 ... O96693 39795129
    1003069 9jze:A (1.84) BS02 MN N/A GO:0008299 ... O96693 39795129
    1003070 9jze:A (1.84) BS03 A1L45 N/A GO:0008299 ... O96693 39795129
    1003071 9jze:B (1.84) BS01 NDP N/A GO:0008299 ... O96693 39795129
    1003072 9jze:B (1.84) BS02 MN N/A GO:0008299 ... O96693 39795129
    1003073 9jze:B (1.84) BS03 A1L45 N/A GO:0008299 ... O96693 39795129
    1003074 9jze:B (1.84) BS04 CA N/A GO:0008299 ... O96693 39795129
    1003075 9jze:B (1.84) BS05 CA N/A GO:0008299 ... O96693 39795129
    1003076 9jzf:A (2.446) BS01 IPE N/A N/A Q0INZ4 N/A
    1003077 9jzf:A (2.446) BS02 ZOL N/A N/A Q0INZ4 N/A
    1003078 9jzf:A (2.446) BS03 MG N/A N/A Q0INZ4 N/A
    1003079 9jzf:A (2.446) BS04 MG N/A N/A Q0INZ4 N/A
    1003080 9jzg:A (1.76) BS01 A1ED8 N/A GO:0000413 ... Q13526 40803165
    1003081 9jzl:A (3.21) BS01 rna N/A N/A P0C796 N/A
    1003082 9jzl:B (3.21) BS01 rna N/A N/A P0C796 N/A
    1003083 9jzl:C (3.21) BS01 rna N/A N/A P0C796 N/A
    1003084 9jzo:A (1.4) BS01 ZN N/A GO:0008745 ... A0A0A8WHU0 40845944
    1003085 9jzo:B (1.4) BS01 ZN N/A GO:0008745 ... A0A0A8WHU0 40845944
    1003086 9jzr:0 (2.73) BS01 CHL N/A N/A N/A N/A
    1003087 9jzr:0 (2.73) BS02 CHL N/A N/A N/A N/A
    1003088 9jzr:0 (2.73) BS03 CLA N/A N/A N/A N/A
    1003089 9jzr:0 (2.73) BS04 CLA N/A N/A N/A N/A
    1003090 9jzr:0 (2.73) BS05 CHL N/A N/A N/A N/A
    1003091 9jzr:0 (2.73) BS06 CHL N/A N/A N/A N/A
    1003092 9jzr:0 (2.73) BS07 CLA N/A N/A N/A N/A
    1003093 9jzr:0 (2.73) BS08 CLA N/A N/A N/A N/A
    1003094 9jzr:0 (2.73) BS09 CLA N/A N/A N/A N/A
    1003095 9jzr:0 (2.73) BS10 CLA N/A N/A N/A N/A
    1003096 9jzr:0 (2.73) BS11 CLA N/A N/A N/A N/A
    1003097 9jzr:0 (2.73) BS12 CLA N/A N/A N/A N/A
    1003098 9jzr:0 (2.73) BS13 CLA N/A N/A N/A N/A
    1003099 9jzr:0 (2.73) BS14 8CT N/A N/A N/A N/A
    1003100 9jzr:0 (2.73) BS15 0UR N/A N/A N/A N/A
    1003101 9jzr:0 (2.73) BS16 0UR N/A N/A N/A N/A
    1003102 9jzr:0 (2.73) BS17 CLA N/A N/A N/A N/A
    1003103 9jzr:0 (2.73) BS18 CLA N/A N/A N/A N/A
    1003104 9jzr:0 (2.73) BS19 CLA N/A N/A N/A N/A
    1003105 9jzr:1 (2.73) BS01 CHL N/A N/A N/A N/A
    1003106 9jzr:1 (2.73) BS02 CLA N/A N/A N/A N/A
    1003107 9jzr:1 (2.73) BS03 CLA N/A N/A N/A N/A
    1003108 9jzr:1 (2.73) BS04 CHL N/A N/A N/A N/A
    1003109 9jzr:1 (2.73) BS05 CHL N/A N/A N/A N/A
    1003110 9jzr:1 (2.73) BS06 CHL N/A N/A N/A N/A
    1003111 9jzr:1 (2.73) BS07 CLA N/A N/A N/A N/A
    1003112 9jzr:1 (2.73) BS08 CLA N/A N/A N/A N/A
    1003113 9jzr:1 (2.73) BS09 CLA N/A N/A N/A N/A
    1003114 9jzr:1 (2.73) BS10 CLA N/A N/A N/A N/A
    1003115 9jzr:1 (2.73) BS11 CLA N/A N/A N/A N/A
    1003116 9jzr:1 (2.73) BS12 CHL N/A N/A N/A N/A
    1003117 9jzr:1 (2.73) BS13 CLA N/A N/A N/A N/A
    1003118 9jzr:1 (2.73) BS14 8CT N/A N/A N/A N/A
    1003119 9jzr:1 (2.73) BS15 0UR N/A N/A N/A N/A
    1003120 9jzr:1 (2.73) BS16 0UR N/A N/A N/A N/A
    1003121 9jzr:1 (2.73) BS17 CLA N/A N/A N/A N/A
    1003122 9jzr:1 (2.73) BS18 CHL N/A N/A N/A N/A
    1003123 9jzr:2 (2.73) BS01 CHL N/A N/A N/A N/A
    1003124 9jzr:2 (2.73) BS02 CHL N/A N/A N/A N/A
    1003125 9jzr:2 (2.73) BS03 CLA N/A N/A N/A N/A
    1003126 9jzr:2 (2.73) BS04 CLA N/A N/A N/A N/A
    1003127 9jzr:2 (2.73) BS05 CHL N/A N/A N/A N/A
    1003128 9jzr:2 (2.73) BS06 CHL N/A N/A N/A N/A
    1003129 9jzr:2 (2.73) BS07 CHL N/A N/A N/A N/A
    1003130 9jzr:2 (2.73) BS08 CHL N/A N/A N/A N/A
    1003131 9jzr:2 (2.73) BS09 CLA N/A N/A N/A N/A
    1003132 9jzr:2 (2.73) BS10 CLA N/A N/A N/A N/A
    1003133 9jzr:2 (2.73) BS11 CLA N/A N/A N/A N/A
    1003134 9jzr:2 (2.73) BS12 CLA N/A N/A N/A N/A
    1003135 9jzr:2 (2.73) BS13 CHL N/A N/A N/A N/A
    1003136 9jzr:2 (2.73) BS14 CLA N/A N/A N/A N/A
    1003137 9jzr:2 (2.73) BS15 CHL N/A N/A N/A N/A
    1003138 9jzr:2 (2.73) BS16 8CT N/A N/A N/A N/A
    1003139 9jzr:2 (2.73) BS17 0UR N/A N/A N/A N/A
    1003140 9jzr:2 (2.73) BS18 0UR N/A N/A N/A N/A
    1003141 9jzr:2 (2.73) BS19 CLA N/A N/A N/A N/A
    1003142 9jzr:2 (2.73) BS20 CHL N/A N/A N/A N/A
    1003143 9jzr:3 (2.73) BS01 CHL N/A N/A N/A N/A
    1003144 9jzr:3 (2.73) BS02 CHL N/A N/A N/A N/A
    1003145 9jzr:3 (2.73) BS03 CHL N/A N/A N/A N/A
    1003146 9jzr:3 (2.73) BS04 CLA N/A N/A N/A N/A
    1003147 9jzr:3 (2.73) BS05 CLA N/A N/A N/A N/A
    1003148 9jzr:3 (2.73) BS06 CHL N/A N/A N/A N/A
    1003149 9jzr:3 (2.73) BS07 CLA N/A N/A N/A N/A
    1003150 9jzr:3 (2.73) BS08 CHL N/A N/A N/A N/A
    1003151 9jzr:3 (2.73) BS09 CLA N/A N/A N/A N/A
    1003152 9jzr:3 (2.73) BS10 CLA N/A N/A N/A N/A
    1003153 9jzr:3 (2.73) BS11 CLA N/A N/A N/A N/A
    1003154 9jzr:3 (2.73) BS12 CLA N/A N/A N/A N/A
    1003155 9jzr:3 (2.73) BS13 CLA N/A N/A N/A N/A
    1003156 9jzr:3 (2.73) BS14 CLA N/A N/A N/A N/A
    1003157 9jzr:3 (2.73) BS15 CLA N/A N/A N/A N/A
    1003158 9jzr:3 (2.73) BS16 CLA N/A N/A N/A N/A
    1003159 9jzr:3 (2.73) BS17 8CT N/A N/A N/A N/A
    1003160 9jzr:3 (2.73) BS18 8CT N/A N/A N/A N/A
    1003161 9jzr:3 (2.73) BS19 0UR N/A N/A N/A N/A
    1003162 9jzr:3 (2.73) BS20 0IE N/A N/A N/A N/A
    1003163 9jzr:3 (2.73) BS21 CHL N/A N/A N/A N/A
    1003164 9jzr:3 (2.73) BS22 8CT N/A N/A N/A N/A
    1003165 9jzr:3 (2.73) BS23 CLA N/A N/A N/A N/A
    1003166 9jzr:3 (2.73) BS24 CLA N/A N/A N/A N/A
    1003167 9jzr:3 (2.73) BS25 CLA N/A N/A N/A N/A
    1003168 9jzr:4 (2.73) BS01 CHL N/A N/A N/A N/A
    1003169 9jzr:4 (2.73) BS02 CLA N/A N/A N/A N/A
    1003170 9jzr:4 (2.73) BS03 CHL N/A N/A N/A N/A
    1003171 9jzr:4 (2.73) BS04 CLA N/A N/A N/A N/A
    1003172 9jzr:4 (2.73) BS05 CLA N/A N/A N/A N/A
    1003173 9jzr:4 (2.73) BS06 CHL N/A N/A N/A N/A
    1003174 9jzr:4 (2.73) BS07 CHL N/A N/A N/A N/A
    1003175 9jzr:4 (2.73) BS08 CHL N/A N/A N/A N/A
    1003176 9jzr:4 (2.73) BS09 CHL N/A N/A N/A N/A
    1003177 9jzr:4 (2.73) BS10 CLA N/A N/A N/A N/A
    1003178 9jzr:4 (2.73) BS11 CLA N/A N/A N/A N/A
    1003179 9jzr:4 (2.73) BS12 CLA N/A N/A N/A N/A
    1003180 9jzr:4 (2.73) BS13 CLA N/A N/A N/A N/A
    1003181 9jzr:4 (2.73) BS14 CHL N/A N/A N/A N/A
    1003182 9jzr:4 (2.73) BS15 CLA N/A N/A N/A N/A
    1003183 9jzr:4 (2.73) BS16 CHL N/A N/A N/A N/A
    1003184 9jzr:4 (2.73) BS17 8CT N/A N/A N/A N/A
    1003185 9jzr:4 (2.73) BS18 0UR N/A N/A N/A N/A
    1003186 9jzr:4 (2.73) BS19 0UR N/A N/A N/A N/A
    1003187 9jzr:5 (2.73) BS01 CHL N/A N/A N/A N/A
    1003188 9jzr:5 (2.73) BS02 CHL N/A N/A N/A N/A
    1003189 9jzr:5 (2.73) BS03 CLA N/A N/A N/A N/A
    1003190 9jzr:5 (2.73) BS04 CLA N/A N/A N/A N/A
    1003191 9jzr:5 (2.73) BS05 CHL N/A N/A N/A N/A
    1003192 9jzr:5 (2.73) BS06 CHL N/A N/A N/A N/A
    1003193 9jzr:5 (2.73) BS07 CHL N/A N/A N/A N/A
    1003194 9jzr:5 (2.73) BS08 CLA N/A N/A N/A N/A
    1003195 9jzr:5 (2.73) BS09 CLA N/A N/A N/A N/A
    1003196 9jzr:5 (2.73) BS10 CLA N/A N/A N/A N/A
    1003197 9jzr:5 (2.73) BS11 CLA N/A N/A N/A N/A
    1003198 9jzr:5 (2.73) BS12 CHL N/A N/A N/A N/A
    1003199 9jzr:5 (2.73) BS13 CLA N/A N/A N/A N/A
    1003200 9jzr:5 (2.73) BS14 0UR N/A N/A N/A N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).