SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1003601 9jzr:h (2.73) BS10 CHL N/A N/A N/A N/A
    1003602 9jzr:h (2.73) BS11 CHL N/A N/A N/A N/A
    1003603 9jzr:h (2.73) BS12 CHL N/A N/A N/A N/A
    1003604 9jzr:h (2.73) BS13 CLA N/A N/A N/A N/A
    1003605 9jzr:h (2.73) BS14 CLA N/A N/A N/A N/A
    1003606 9jzr:h (2.73) BS15 CLA N/A N/A N/A N/A
    1003607 9jzr:h (2.73) BS16 CLA N/A N/A N/A N/A
    1003608 9jzr:i (2.73) BS01 CHL N/A N/A N/A N/A
    1003609 9jzr:i (2.73) BS02 CHL N/A N/A N/A N/A
    1003610 9jzr:i (2.73) BS03 0UR N/A N/A N/A N/A
    1003611 9jzr:i (2.73) BS04 0IE N/A N/A N/A N/A
    1003612 9jzr:i (2.73) BS05 0IE N/A N/A N/A N/A
    1003613 9jzr:i (2.73) BS06 CHL N/A N/A N/A N/A
    1003614 9jzr:i (2.73) BS07 CHL N/A N/A N/A N/A
    1003615 9jzr:i (2.73) BS08 CLA N/A N/A N/A N/A
    1003616 9jzr:i (2.73) BS09 CHL N/A N/A N/A N/A
    1003617 9jzr:i (2.73) BS10 CHL N/A N/A N/A N/A
    1003618 9jzr:i (2.73) BS11 CHL N/A N/A N/A N/A
    1003619 9jzr:i (2.73) BS12 CHL N/A N/A N/A N/A
    1003620 9jzr:i (2.73) BS13 CHL N/A N/A N/A N/A
    1003621 9jzr:i (2.73) BS14 CLA N/A N/A N/A N/A
    1003622 9jzr:i (2.73) BS15 CLA N/A N/A N/A N/A
    1003623 9jzr:i (2.73) BS16 CLA N/A N/A N/A N/A
    1003624 9jzr:i (2.73) BS17 CLA N/A N/A N/A N/A
    1003625 9jzr:i (2.73) BS18 CHL N/A N/A N/A N/A
    1003626 9jzs:A (1.91) BS01 A1AT6 N/A GO:0000413 ... Q13526 40803165
    1003627 9jzt:A (3.1) BS01 dna N/A N/A Q9HC78 40494351
    1003628 9jzt:A (3.1) BS02 dna N/A N/A Q9HC78 40494351
    1003629 9jzt:A (3.1) BS03 ZN N/A N/A Q9HC78 40494351
    1003630 9jzt:A (3.1) BS04 ZN N/A N/A Q9HC78 40494351
    1003631 9jzt:A (3.1) BS05 ZN N/A N/A Q9HC78 40494351
    1003632 9jzt:A (3.1) BS06 ZN N/A N/A Q9HC78 40494351
    1003633 9jzu:A (1.68) BS01 A1ED9 N/A GO:0000413 ... Q13526 40803165
    1003634 9jzu:A (1.68) BS02 A1ED9 N/A GO:0000413 ... Q13526 40803165
    1003635 9jzu:A (1.68) BS03 A1ED9 N/A GO:0000413 ... Q13526 40803165
    1003636 9jzv:A (1.9) BS01 A1EEA N/A GO:0000413 ... Q13526 40803165
    1003637 9jzx:A (2.5) BS01 AMP N/A GO:0004637 ... P08178 41581817
    1003638 9jzx:B (2.5) BS01 AMP N/A GO:0004637 ... P08178 41581817
    1003639 9jzx:C (2.5) BS01 AMP N/A GO:0004637 ... P08178 41581817
    1003640 9jzy:A (2.26) BS01 ZN N/A GO:0004637 ... O58054 41581817
    1003641 9jzy:A (2.26) BS02 ZN N/A GO:0004637 ... O58054 41581817
    1003642 9jzy:A (2.26) BS03 ZN N/A GO:0004637 ... O58054 41581817
    1003643 9jzy:A (2.26) BS04 ZN N/A GO:0004637 ... O58054 41581817
    1003644 9jzz:A (2.05) BS01 AMP N/A GO:0004637 ... O58054 41581817
    1003645 9jzz:A (2.05) BS02 ZN N/A GO:0004637 ... O58054 41581817
    1003646 9jzz:A (2.05) BS03 ZN N/A GO:0004637 ... O58054 41581817
    1003647 9jzz:A (2.05) BS04 ZN N/A GO:0004637 ... O58054 41581817
    1003648 9jzz:A (2.05) BS05 ZN N/A GO:0004637 ... O58054 41581817
    1003649 9k01:A (1.6) BS01 ADP N/A GO:0004637 ... Q9UY56 41581817
    1003650 9k01:A (1.6) BS02 ADP N/A GO:0004637 ... Q9UY56 41581817
    1003651 9k01:B (1.6) BS01 ADP N/A GO:0004637 ... Q9UY56 41581817
    1003652 9k01:B (1.6) BS02 ADP N/A GO:0004637 ... Q9UY56 41581817
    1003653 9k02:A (2.0) BS01 ADP N/A GO:0004637 ... Q9UY56 41581817
    1003654 9k02:A (2.0) BS02 MG N/A GO:0004637 ... Q9UY56 41581817
    1003655 9k02:A (2.0) BS03 ADP N/A GO:0004637 ... Q9UY56 41581817
    1003656 9k02:B (2.0) BS01 ADP N/A GO:0004637 ... Q9UY56 41581817
    1003657 9k02:B (2.0) BS02 ADP N/A GO:0004637 ... Q9UY56 41581817
    1003658 9k02:B (2.0) BS03 MG N/A GO:0004637 ... Q9UY56 41581817
    1003659 9k03:A (2.25) BS01 ANP N/A GO:0004637 ... Q9UY56 41581817
    1003660 9k03:A (2.25) BS02 MN N/A GO:0004637 ... Q9UY56 41581817
    1003661 9k03:A (2.25) BS03 ANP N/A GO:0004637 ... Q9UY56 41581817
    1003662 9k03:B (2.25) BS01 ANP N/A GO:0004637 ... Q9UY56 41581817
    1003663 9k03:B (2.25) BS02 ANP N/A GO:0004637 ... Q9UY56 41581817
    1003664 9k03:B (2.25) BS03 MN N/A GO:0004637 ... Q9UY56 41581817
    1003665 9k04:A (1.6) BS01 ADP N/A GO:0004637 ... Q9UY56 41581817
    1003666 9k04:A (1.6) BS02 PO4 N/A GO:0004637 ... Q9UY56 41581817
    1003667 9k04:A (1.6) BS03 MN N/A GO:0004637 ... Q9UY56 41581817
    1003668 9k04:A (1.6) BS04 ADP N/A GO:0004637 ... Q9UY56 41581817
    1003669 9k04:B (1.6) BS01 ADP N/A GO:0004637 ... Q9UY56 41581817
    1003670 9k04:B (1.6) BS02 PO4 N/A GO:0004637 ... Q9UY56 41581817
    1003671 9k04:B (1.6) BS03 ADP N/A GO:0004637 ... Q9UY56 41581817
    1003672 9k04:B (1.6) BS04 MN N/A GO:0004637 ... Q9UY56 41581817
    1003673 9k05:A (1.8) BS01 FGR N/A GO:0004637 ... Q9UY56 41581817
    1003674 9k05:A (1.8) BS02 AMP N/A GO:0004637 ... Q9UY56 41581817
    1003675 9k05:A (1.8) BS03 AMP N/A GO:0004637 ... Q9UY56 41581817
    1003676 9k05:A (1.8) BS04 FGR N/A GO:0004637 ... Q9UY56 41581817
    1003677 9k05:B (1.8) BS01 FGR N/A GO:0004637 ... Q9UY56 41581817
    1003678 9k05:B (1.8) BS02 AMP N/A GO:0004637 ... Q9UY56 41581817
    1003679 9k05:B (1.8) BS03 AMP N/A GO:0004637 ... Q9UY56 41581817
    1003680 9k05:B (1.8) BS04 FGR N/A GO:0004637 ... Q9UY56 41581817
    1003681 9k07:R (2.83) BS01 A1EL6 N/A GO:0004930 ... P32247
    Q9GV45
    41132856
    1003682 9k0a:A (2.17) BS01 A1L46 N/A N/A E4NIM4 N/A
    1003683 9k0a:A (2.17) BS02 A1L46 N/A N/A E4NIM4 N/A
    1003684 9k0a:B (2.17) BS01 A1L46 N/A N/A E4NIM4 N/A
    1003685 9k0b:A (2.1) BS01 TRP N/A N/A E4NIM4 N/A
    1003686 9k0b:A (2.1) BS02 TRP N/A N/A E4NIM4 N/A
    1003687 9k0b:B (2.1) BS01 TRP N/A N/A E4NIM4 N/A
    1003688 9k0c:A (3.06) BS01 CL N/A GO:0005283 ... P31641 40789850
    1003689 9k0d:C (2.6) BS01 peptide N/A GO:0016020 ... B4DMD5 40593714
    1003690 9k0d:C (2.6) BS02 peptide N/A GO:0016020 ... B4DMD5 40593714
    1003691 9k0d:G (2.6) BS01 peptide N/A GO:0016020 ... B4DMD5 40593714
    1003692 9k0d:G (2.6) BS02 peptide N/A GO:0016020 ... B4DMD5 40593714
    1003693 9k0d:M (2.6) BS01 peptide N/A GO:0016020 ... B4DMD5 40593714
    1003694 9k0d:M (2.6) BS02 peptide N/A GO:0016020 ... B4DMD5 40593714
    1003695 9k0d:N (2.6) BS01 peptide N/A GO:0016020 ... B4DMD5 40593714
    1003696 9k0d:U (2.6) BS01 peptide N/A GO:0016020 ... B4DMD5 40593714
    1003697 9k0d:U (2.6) BS02 peptide N/A GO:0016020 ... B4DMD5 40593714
    1003698 9k0d:V (2.6) BS01 peptide N/A GO:0016020 ... B4DMD5 40593714
    1003699 9k0e:B (2.8) BS01 peptide N/A GO:0016020 ... B4DMD5 40593714
    1003700 9k0e:B (2.8) BS02 peptide N/A GO:0016020 ... B4DMD5 40593714
    1003701 9k0e:G (2.8) BS01 peptide N/A GO:0016020 ... B4DMD5 40593714
    1003702 9k0e:G (2.8) BS02 peptide N/A GO:0016020 ... B4DMD5 40593714
    1003703 9k0e:H (2.8) BS01 peptide N/A GO:0016020 ... B4DMD5 40593714
    1003704 9k0e:H (2.8) BS02 peptide N/A GO:0016020 ... B4DMD5 40593714
    1003705 9k0e:I (2.8) BS01 peptide N/A GO:0016020 ... B4DMD5 40593714
    1003706 9k0e:N (2.8) BS01 peptide N/A GO:0016020 ... B4DMD5 40593714
    1003707 9k0e:N (2.8) BS02 peptide N/A GO:0016020 ... B4DMD5 40593714
    1003708 9k0e:O (2.8) BS01 peptide N/A GO:0016020 ... B4DMD5 40593714
    1003709 9k0f:D (2.8) BS01 peptide N/A GO:0016020 ... B4DMD5 40593714
    1003710 9k0f:E (2.8) BS01 peptide N/A GO:0016020 ... B4DMD5 40593714
    1003711 9k0f:E (2.8) BS02 peptide N/A GO:0016020 ... B4DMD5 40593714
    1003712 9k0f:F (2.8) BS01 peptide N/A GO:0016020 ... B4DMD5 40593714
    1003713 9k0f:F (2.8) BS02 peptide N/A GO:0016020 ... B4DMD5 40593714
    1003714 9k0g:A (1.62) BS01 ZN N/A GO:0004407 ... Q92769 N/A
    1003715 9k0g:A (1.62) BS02 CA N/A GO:0004407 ... Q92769 N/A
    1003716 9k0g:A (1.62) BS03 CA N/A GO:0004407 ... Q92769 N/A
    1003717 9k0g:A (1.62) BS04 A1L47 N/A GO:0004407 ... Q92769 N/A
    1003718 9k0g:B (1.62) BS01 ZN N/A GO:0004407 ... Q92769 N/A
    1003719 9k0g:B (1.62) BS02 CA N/A GO:0004407 ... Q92769 N/A
    1003720 9k0g:B (1.62) BS03 CA N/A GO:0004407 ... Q92769 N/A
    1003721 9k0g:B (1.62) BS04 A1L47 N/A GO:0004407 ... Q92769 N/A
    1003722 9k0g:C (1.62) BS01 ZN N/A GO:0004407 ... Q92769 N/A
    1003723 9k0g:C (1.62) BS02 CA N/A GO:0004407 ... Q92769 N/A
    1003724 9k0g:C (1.62) BS03 CA N/A GO:0004407 ... Q92769 N/A
    1003725 9k0g:C (1.62) BS04 A1L47 N/A GO:0004407 ... Q92769 N/A
    1003726 9k0i:A (2.236) BS01 A1EEW N/A GO:0004672 ... P22455 N/A
    1003727 9k0j:A (2.068) BS01 A1EEX N/A GO:0004672 ... P22455 N/A
    1003728 9k0k:I (3.14) BS01 UTP N/A GO:0004930 ... P51582 40360475
    1003729 9k0n:A (3.21) BS01 BAL N/A GO:0005283 ... P31641 40789850
    1003730 9k0n:A (3.21) BS02 NA N/A GO:0005283 ... P31641 40789850
    1003731 9k0n:A (3.21) BS03 NA N/A GO:0005283 ... P31641 40789850
    1003732 9k0n:A (3.21) BS04 CL N/A GO:0005283 ... P31641 40789850
    1003733 9k0o:A (2.95) BS01 CL N/A GO:0005283 ... P31641 40789850
    1003734 9k0o:A (2.95) BS02 NMG N/A GO:0005283 ... P31641 40789850
    1003735 9k0x:I (2.83) BS01 ATP N/A GO:0004930 ... P41231 40360475
    1003736 9k0z:1 (4.7) BS01 rna N/A GO:0003723 ... A0QSG0 40569974
    1003737 9k0z:7 (4.7) BS01 rna N/A GO:0003746 ... A0R6G0 40569974
    1003738 9k0z:7 (4.7) BS02 rna N/A GO:0003746 ... A0R6G0 40569974
    1003739 9k0z:7 (4.7) BS03 rna N/A GO:0003746 ... A0R6G0 40569974
    1003740 9k0z:7 (4.7) BS04 GNP N/A GO:0003746 ... A0R6G0 40569974
    1003741 9k0z:C (4.7) BS01 rna N/A GO:0003676 ... A0QSD7 40569974
    1003742 9k0z:D (4.7) BS01 rna N/A GO:0003723 ... A0QSL7 40569974
    1003743 9k0z:E (4.7) BS01 rna N/A GO:0003723 ... A0QSG6 40569974
    1003744 9k0z:F (4.7) BS01 rna N/A GO:0003735 ... A0R7F9 40569974
    1003745 9k0z:F (4.7) BS02 MG N/A GO:0003735 ... A0R7F9 40569974
    1003746 9k0z:G (4.7) BS01 rna N/A GO:0000049 ... A0QS97 40569974
    1003747 9k0z:G (4.7) BS02 rna N/A GO:0000049 ... A0QS97 40569974
    1003748 9k0z:H (4.7) BS01 rna N/A GO:0003735 ... A0QSG3 40569974
    1003749 9k0z:I (4.7) BS01 rna N/A GO:0003735 ... A0QSP9 40569974
    1003750 9k0z:I (4.7) BS02 rna N/A GO:0003735 ... A0QSP9 40569974
    1003751 9k0z:J (4.7) BS01 rna N/A GO:0000049 ... A0QSD0 40569974
    1003752 9k0z:K (4.7) BS01 rna N/A GO:0003735 ... A0QSL6 40569974
    1003753 9k0z:L (4.7) BS01 rna N/A GO:0000049 ... A0QS96 40569974
    1003754 9k0z:M (4.7) BS01 rna N/A GO:0000049 ... A0QSL5 40569974
    1003755 9k0z:M (4.7) BS02 rna N/A GO:0000049 ... A0QSL5 40569974
    1003756 9k0z:N (4.7) BS01 rna N/A GO:0003735 ... A0QSG2 40569974
    1003757 9k0z:N (4.7) BS02 ZN N/A GO:0003735 ... A0QSG2 40569974
    1003758 9k0z:O (4.7) BS01 rna N/A GO:0003735 ... A0QVQ3 40569974
    1003759 9k0z:O (4.7) BS02 rna N/A GO:0003735 ... A0QVQ3 40569974
    1003760 9k0z:P (4.7) BS01 rna N/A GO:0003735 ... A0QV37 40569974
    1003761 9k0z:Q (4.7) BS01 rna N/A GO:0003735 ... A0QSE0 40569974
    1003762 9k0z:R (4.7) BS01 rna N/A GO:0003735 ... A0R7F7 40569974
    1003763 9k0z:R (4.7) BS02 ZN N/A GO:0003735 ... A0R7F7 40569974
    1003764 9k0z:S (4.7) BS01 rna N/A GO:0003723 ... A0QSD5 40569974
    1003765 9k0z:T (4.7) BS01 rna N/A GO:0003723 ... A0R102 40569974
    1003766 9k0z:U (4.7) BS01 rna N/A GO:0003735 ... A0QSD3 40569974
    1003767 9k0z:V (4.7) BS01 rna N/A GO:0003735 ... A0QVB8 40569974
    1003768 9k0z:W (4.7) BS01 rna N/A GO:0003735 ... A0R3D2 40569974
    1003769 9k0z:X (4.7) BS01 rna N/A GO:0003735 ... A0R150 40569974
    1003770 9k0z:X (4.7) BS02 rna N/A GO:0003735 ... A0R150 40569974
    1003771 9k0z:Y (4.7) BS01 rna N/A GO:0003735 ... A0QV03 40569974
    1003772 9k0z:Y (4.7) BS02 ZN N/A GO:0003735 ... A0QV03 40569974
    1003773 9k0z:Z (4.7) BS01 rna N/A GO:0003735 ... A0QSD9 40569974
    1003774 9k0z:a (4.7) BS01 rna N/A GO:0003735 ... A0QSG7 40569974
    1003775 9k0z:a (4.7) BS02 rna N/A GO:0003735 ... A0QSG7 40569974
    1003776 9k0z:b (4.7) BS01 rna N/A GO:0003735 ... A0R3I9 40569974
    1003777 9k0z:c (4.7) BS01 rna N/A GO:0003735 ... A0QS39 40569974
    1003778 9k0z:c (4.7) BS02 ZN N/A GO:0003735 ... A0QS39 40569974
    1003779 9k0z:d (4.7) BS01 rna N/A GO:0003735 ... A0R7K0 40569974
    1003780 9k0z:e (4.7) BS01 rna N/A GO:0003735 ... A0QYU7 40569974
    1003781 9k0z:f (4.7) BS01 rna N/A GO:0003735 ... A0QSL4 40569974
    1003782 9k0z:f (4.7) BS02 ZN N/A GO:0003735 ... A0QSL4 40569974
    1003783 9k0z:g (4.7) BS01 rna N/A GO:0003735 ... A0R215 40569974
    1003784 9k0z:g (4.7) BS02 ZN N/A GO:0003735 ... A0R215 40569974
    1003785 9k0z:i (4.7) BS01 rna N/A GO:0002181 ... A0QSD4 40569974
    1003786 9k0z:i (4.7) BS02 MG N/A GO:0002181 ... A0QSD4 40569974
    1003787 9k0z:i (4.7) BS03 MG N/A GO:0002181 ... A0QSD4 40569974
    1003788 9k0z:j (4.7) BS01 rna N/A GO:0003735 ... A0QSD1 40569974
    1003789 9k0z:k (4.7) BS01 rna N/A GO:0003735 ... A0QSD2 40569974
    1003790 9k0z:l (4.7) BS01 rna N/A GO:0000049 ... A0QSG1 40569974
    1003791 9k0z:l (4.7) BS02 rna N/A GO:0000049 ... A0QSG1 40569974
    1003792 9k0z:l (4.7) BS03 rna N/A GO:0000049 ... A0QSG1 40569974
    1003793 9k0z:l (4.7) BS04 MG N/A GO:0000049 ... A0QSG1 40569974
    1003794 9k0z:m (4.7) BS01 rna N/A GO:0002181 ... A0QSG4 40569974
    1003795 9k0z:n (4.7) BS01 rna N/A GO:0003735 ... A0R7F6 40569974
    1003796 9k0z:o (4.7) BS01 rna N/A GO:0003735 ... A0QS62 40569974
    1003797 9k0z:p (4.7) BS01 rna N/A GO:0003735 ... A0QS45 40569974
    1003798 9k0z:q (4.7) BS01 rna N/A GO:0003729 ... A0QSP8 40569974
    1003799 9k0z:r (4.7) BS01 rna N/A GO:0003735 ... A0QSF9 40569974
    1003800 9k0z:r (4.7) BS02 rna N/A GO:0003735 ... A0QSF9 40569974

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).