SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1004401 9k2c:K (1.98) BS01 A1EEF N/A GO:0004176 ... Q2G036 39760203
    1004402 9k2c:K (1.98) BS02 MG N/A GO:0004176 ... Q2G036 39760203
    1004403 9k2c:K (1.98) BS03 A1EEF N/A GO:0004176 ... Q2G036 39760203
    1004404 9k2c:L (1.98) BS01 A1EEF N/A GO:0004176 ... Q2G036 39760203
    1004405 9k2c:L (1.98) BS02 MG N/A GO:0004176 ... Q2G036 39760203
    1004406 9k2c:L (1.98) BS03 A1EEF N/A GO:0004176 ... Q2G036 39760203
    1004407 9k2c:M (1.98) BS01 A1EEF N/A GO:0004176 ... Q2G036 39760203
    1004408 9k2c:M (1.98) BS02 MG N/A GO:0004176 ... Q2G036 39760203
    1004409 9k2c:M (1.98) BS03 A1EEF N/A GO:0004176 ... Q2G036 39760203
    1004410 9k2c:N (1.98) BS01 A1EEF N/A GO:0004176 ... Q2G036 39760203
    1004411 9k2c:N (1.98) BS02 A1EEF N/A GO:0004176 ... Q2G036 39760203
    1004412 9k2c:N (1.98) BS03 MG N/A GO:0004176 ... Q2G036 39760203
    1004413 9k2d:A (1.98) BS01 A1EEK N/A GO:0004176 ... Q2G036 39760203
    1004414 9k2d:A (1.98) BS02 A1EEK N/A GO:0004176 ... Q2G036 39760203
    1004415 9k2d:B (1.98) BS01 A1EEK N/A GO:0004176 ... Q2G036 39760203
    1004416 9k2d:B (1.98) BS02 A1EEK N/A GO:0004176 ... Q2G036 39760203
    1004417 9k2d:C (1.98) BS01 A1EEK N/A GO:0004176 ... Q2G036 39760203
    1004418 9k2d:C (1.98) BS02 A1EEK N/A GO:0004176 ... Q2G036 39760203
    1004419 9k2d:D (1.98) BS01 A1EEK N/A GO:0004176 ... Q2G036 39760203
    1004420 9k2d:D (1.98) BS02 A1EEK N/A GO:0004176 ... Q2G036 39760203
    1004421 9k2d:E (1.98) BS01 A1EEK N/A GO:0004176 ... Q2G036 39760203
    1004422 9k2d:E (1.98) BS02 A1EEK N/A GO:0004176 ... Q2G036 39760203
    1004423 9k2d:F (1.98) BS01 A1EEK N/A GO:0004176 ... Q2G036 39760203
    1004424 9k2d:F (1.98) BS02 A1EEK N/A GO:0004176 ... Q2G036 39760203
    1004425 9k2d:G (1.98) BS01 A1EEK N/A GO:0004176 ... Q2G036 39760203
    1004426 9k2d:G (1.98) BS02 A1EEK N/A GO:0004176 ... Q2G036 39760203
    1004427 9k2d:H (1.98) BS01 A1EEK N/A GO:0004176 ... Q2G036 39760203
    1004428 9k2d:H (1.98) BS02 A1EEK N/A GO:0004176 ... Q2G036 39760203
    1004429 9k2d:I (1.98) BS01 A1EEK N/A GO:0004176 ... Q2G036 39760203
    1004430 9k2d:I (1.98) BS02 A1EEK N/A GO:0004176 ... Q2G036 39760203
    1004431 9k2d:J (1.98) BS01 A1EEK N/A GO:0004176 ... Q2G036 39760203
    1004432 9k2d:J (1.98) BS02 A1EEK N/A GO:0004176 ... Q2G036 39760203
    1004433 9k2d:K (1.98) BS01 A1EEK N/A GO:0004176 ... Q2G036 39760203
    1004434 9k2d:K (1.98) BS02 A1EEK N/A GO:0004176 ... Q2G036 39760203
    1004435 9k2d:L (1.98) BS01 A1EEK N/A GO:0004176 ... Q2G036 39760203
    1004436 9k2d:L (1.98) BS02 A1EEK N/A GO:0004176 ... Q2G036 39760203
    1004437 9k2d:M (1.98) BS01 A1EEK N/A GO:0004176 ... Q2G036 39760203
    1004438 9k2d:M (1.98) BS02 A1EEK N/A GO:0004176 ... Q2G036 39760203
    1004439 9k2d:N (1.98) BS01 A1EEK N/A GO:0004176 ... Q2G036 39760203
    1004440 9k2d:N (1.98) BS02 A1EEK N/A GO:0004176 ... Q2G036 39760203
    1004441 9k2e:A (2.02) BS01 ZN N/A GO:0004767 ... P58242 N/A
    1004442 9k2e:A (2.02) BS02 ZN N/A GO:0004767 ... P58242 N/A
    1004443 9k2e:B (2.02) BS01 ZN N/A GO:0004767 ... P58242 N/A
    1004444 9k2e:B (2.02) BS02 ZN N/A GO:0004767 ... P58242 N/A
    1004445 9k2f:B (2.7) BS01 SAH N/A N/A A0A6M3FWK4 N/A
    1004446 9k2f:D (2.7) BS01 SAH N/A N/A A0A6M3FWK4 N/A
    1004447 9k2g:A (3.0) BS01 dna N/A GO:0000287 ... O14802 40468065
    1004448 9k2g:A (3.0) BS02 dna N/A GO:0000287 ... O14802 40468065
    1004449 9k2g:A (3.0) BS03 rna N/A GO:0000287 ... O14802 40468065
    1004450 9k2g:A (3.0) BS04 ZN N/A GO:0000287 ... O14802 40468065
    1004451 9k2g:A (3.0) BS05 ZN N/A GO:0000287 ... O14802 40468065
    1004452 9k2g:A (3.0) BS06 MG N/A GO:0000287 ... O14802 40468065
    1004453 9k2g:B (3.0) BS01 dna N/A GO:0000428 ... Q9NW08 40468065
    1004454 9k2g:B (3.0) BS02 dna N/A GO:0000428 ... Q9NW08 40468065
    1004455 9k2g:B (3.0) BS03 rna N/A GO:0000428 ... Q9NW08 40468065
    1004456 9k2g:B (3.0) BS04 ZN N/A GO:0000428 ... Q9NW08 40468065
    1004457 9k2g:B (3.0) BS05 3AT N/A GO:0000428 ... Q9NW08 40468065
    1004458 9k2g:I (3.0) BS01 ZN N/A GO:0003676 ... Q9Y2Y1 40468065
    1004459 9k2g:J (3.0) BS01 ZN N/A GO:0003677 ... P62875 40468065
    1004460 9k2g:L (3.0) BS01 ZN N/A GO:0001650 ... P53803 40468065
    1004461 9k2g:P (3.0) BS01 SF4 N/A GO:0003690 ... Q9H1D9 40468065
    1004462 9k2i:A (3.05) BS01 peptide N/A GO:0000139 ... Q8WLS4 N/A
    1004463 9k2i:E (3.05) BS01 peptide N/A N/A N/A N/A
    1004464 9k2i:F (3.05) BS01 peptide N/A GO:0000139 ... Q8WLS4 N/A
    1004465 9k2i:I (3.05) BS01 peptide N/A N/A N/A N/A
    1004466 9k2i:J (3.05) BS01 peptide N/A N/A N/A N/A
    1004467 9k2i:K (3.05) BS01 peptide N/A GO:0000139 ... Q8WLS4 N/A
    1004468 9k2i:O (3.05) BS01 peptide N/A N/A N/A N/A
    1004469 9k2i:P (3.05) BS01 peptide N/A GO:0000139 ... Q8WLS4 N/A
    1004470 9k2i:S (3.05) BS01 peptide N/A N/A N/A N/A
    1004471 9k2i:T (3.05) BS01 peptide N/A N/A N/A N/A
    1004472 9k2k:A (2.74) BS01 A1EEG N/A GO:0004176 ... Q2G036 39760203
    1004473 9k2k:A (2.74) BS02 A1EEG N/A GO:0004176 ... Q2G036 39760203
    1004474 9k2k:B (2.74) BS01 A1EEG N/A GO:0004176 ... Q2G036 39760203
    1004475 9k2k:B (2.74) BS02 A1EEG N/A GO:0004176 ... Q2G036 39760203
    1004476 9k2k:C (2.74) BS01 A1EEG N/A GO:0004176 ... Q2G036 39760203
    1004477 9k2k:C (2.74) BS02 A1EEG N/A GO:0004176 ... Q2G036 39760203
    1004478 9k2k:D (2.74) BS01 A1EEG N/A GO:0004176 ... Q2G036 39760203
    1004479 9k2k:D (2.74) BS02 A1EEG N/A GO:0004176 ... Q2G036 39760203
    1004480 9k2k:E (2.74) BS01 A1EEG N/A GO:0004176 ... Q2G036 39760203
    1004481 9k2k:E (2.74) BS02 A1EEG N/A GO:0004176 ... Q2G036 39760203
    1004482 9k2k:F (2.74) BS01 A1EEG N/A GO:0004176 ... Q2G036 39760203
    1004483 9k2k:F (2.74) BS02 A1EEG N/A GO:0004176 ... Q2G036 39760203
    1004484 9k2k:G (2.74) BS01 A1EEG N/A GO:0004176 ... Q2G036 39760203
    1004485 9k2k:G (2.74) BS02 A1EEG N/A GO:0004176 ... Q2G036 39760203
    1004486 9k2k:H (2.74) BS01 A1EEG N/A GO:0004176 ... Q2G036 39760203
    1004487 9k2k:H (2.74) BS02 A1EEG N/A GO:0004176 ... Q2G036 39760203
    1004488 9k2k:I (2.74) BS01 A1EEG N/A GO:0004176 ... Q2G036 39760203
    1004489 9k2k:I (2.74) BS02 A1EEG N/A GO:0004176 ... Q2G036 39760203
    1004490 9k2k:J (2.74) BS01 A1EEG N/A GO:0004176 ... Q2G036 39760203
    1004491 9k2k:J (2.74) BS02 A1EEG N/A GO:0004176 ... Q2G036 39760203
    1004492 9k2k:K (2.74) BS01 A1EEG N/A GO:0004176 ... Q2G036 39760203
    1004493 9k2k:K (2.74) BS02 A1EEG N/A GO:0004176 ... Q2G036 39760203
    1004494 9k2k:L (2.74) BS01 A1EEG N/A GO:0004176 ... Q2G036 39760203
    1004495 9k2k:L (2.74) BS02 A1EEG N/A GO:0004176 ... Q2G036 39760203
    1004496 9k2k:M (2.74) BS01 A1EEG N/A GO:0004176 ... Q2G036 39760203
    1004497 9k2k:M (2.74) BS02 A1EEG N/A GO:0004176 ... Q2G036 39760203
    1004498 9k2k:N (2.74) BS01 A1EEG N/A GO:0004176 ... Q2G036 39760203
    1004499 9k2k:N (2.74) BS02 A1EEG N/A GO:0004176 ... Q2G036 39760203
    1004500 9k2n:A (3.4) BS01 MG N/A GO:0003824 ... A0A7U3Y893 N/A
    1004501 9k2n:A (3.4) BS02 MG N/A GO:0003824 ... A0A7U3Y893 N/A
    1004502 9k2n:B (3.4) BS01 MG N/A GO:0003824 ... A0A7U3Y893 N/A
    1004503 9k2n:B (3.4) BS02 MG N/A GO:0003824 ... A0A7U3Y893 N/A
    1004504 9k2n:C (3.4) BS01 MG N/A GO:0003824 ... A0A7U3Y893 N/A
    1004505 9k2n:C (3.4) BS02 MG N/A GO:0003824 ... A0A7U3Y893 N/A
    1004506 9k2n:D (3.4) BS01 MG N/A GO:0003824 ... A0A7U3Y893 N/A
    1004507 9k2n:D (3.4) BS02 MG N/A GO:0003824 ... A0A7U3Y893 N/A
    1004508 9k2n:E (3.4) BS01 MG N/A GO:0003824 ... A0A7U3Y893 N/A
    1004509 9k2n:E (3.4) BS02 MG N/A GO:0003824 ... A0A7U3Y893 N/A
    1004510 9k2n:F (3.4) BS01 MG N/A GO:0003824 ... A0A7U3Y893 N/A
    1004511 9k2n:F (3.4) BS02 MG N/A GO:0003824 ... A0A7U3Y893 N/A
    1004512 9k2r:A (2.98) BS01 peptide N/A N/A A0A165EYK7 N/A
    1004513 9k2r:D (2.98) BS01 peptide N/A N/A A0A165EYK7 N/A
    1004514 9k2r:G (2.98) BS01 peptide N/A N/A A0A165EYK7 N/A
    1004515 9k2r:J (2.98) BS01 peptide N/A N/A N/A N/A
    1004516 9k2r:K (2.98) BS01 peptide N/A N/A N/A N/A
    1004517 9k2r:L (2.98) BS01 peptide N/A N/A N/A N/A
    1004518 9k2r:M (2.98) BS01 peptide N/A N/A N/A N/A
    1004519 9k2r:N (2.98) BS01 peptide N/A N/A N/A N/A
    1004520 9k2r:O (2.98) BS01 peptide N/A N/A N/A N/A
    1004521 9k2s:A (2.4) BS01 peptide N/A N/A A0A165EYK7 N/A
    1004522 9k2t:A (2.2) BS01 peptide N/A N/A A0A165EYK7 N/A
    1004523 9k2u:A (2.1) BS01 peptide N/A N/A A0A165EYK7 N/A
    1004524 9k2v:A (3.4) BS01 ZN N/A GO:0003824 ... A0A059PY91 40163721
    1004525 9k2v:B (3.4) BS01 ZN N/A GO:0003824 ... A0A059PY91 40163721
    1004526 9k2v:C (3.4) BS01 ZN N/A GO:0003824 ... A0A059PY91 40163721
    1004527 9k2v:D (3.4) BS01 ZN N/A GO:0003824 ... A0A059PY91 40163721
    1004528 9k2v:E (3.4) BS01 ZN N/A GO:0003824 ... A0A059PY91 40163721
    1004529 9k2w:B (3.54) BS01 ZN N/A GO:0003677 ... P26358 40645181
    1004530 9k2w:B (3.54) BS02 ZN N/A GO:0003677 ... P26358 40645181
    1004531 9k2y:A (3.12) BS01 GAL N/A N/A P0DOX5 40222416
    1004532 9k2y:B (3.12) BS01 BMA N/A N/A P0DOX5 40222416
    1004533 9k2y:B (3.12) BS02 GAL N/A N/A P0DOX5 40222416
    1004534 9k2y:C (3.12) BS01 BMA N/A N/A P0DOX5 40222416
    1004535 9k2y:D (3.12) BS01 GAL N/A N/A P0DOX5 40222416
    1004536 9k2z:A (2.78) BS01 rna N/A N/A N/A 41617991
    1004537 9k2z:A (2.78) BS02 dna N/A N/A N/A 41617991
    1004538 9k2z:A (2.78) BS03 dna N/A N/A N/A 41617991
    1004539 9k30:A (3.17) BS01 rna N/A N/A N/A 41617991
    1004540 9k30:A (3.17) BS02 dna N/A N/A N/A 41617991
    1004541 9k30:A (3.17) BS03 dna N/A N/A N/A 41617991
    1004542 9k30:A (3.17) BS04 ZN N/A N/A N/A 41617991
    1004543 9k31:A (2.38) BS01 rna N/A N/A N/A 41617991
    1004544 9k31:A (2.38) BS02 dna N/A N/A N/A 41617991
    1004545 9k31:A (2.38) BS03 dna N/A N/A N/A 41617991
    1004546 9k31:A (2.38) BS04 MG N/A N/A N/A 41617991
    1004547 9k31:A (2.38) BS05 ZN N/A N/A N/A 41617991
    1004548 9k31:A (2.38) BS06 ZN N/A N/A N/A 41617991
    1004549 9k32:A (2.85) BS01 rna N/A N/A N/A 41617991
    1004550 9k32:A (2.85) BS02 dna N/A N/A N/A 41617991
    1004551 9k32:A (2.85) BS03 dna N/A N/A N/A 41617991
    1004552 9k32:A (2.85) BS04 MG N/A N/A N/A 41617991
    1004553 9k32:A (2.85) BS05 ZN N/A N/A N/A 41617991
    1004554 9k32:A (2.85) BS06 ZN N/A N/A N/A 41617991
    1004555 9k34:A (3.0) BS01 GAL N/A N/A P0DOX5 40222416
    1004556 9k34:A (3.0) BS02 GAL N/A N/A P0DOX5 40222416
    1004557 9k34:B (3.0) BS01 BMA N/A N/A P0DOX5 40222416
    1004558 9k34:C (3.0) BS01 BMA N/A N/A P0DOX5 40222416
    1004559 9k34:C (3.0) BS02 GAL N/A N/A P0DOX5 40222416
    1004560 9k34:D (3.0) BS01 BMA N/A N/A P0DOX5 40222416
    1004561 9k34:D (3.0) BS02 GAL N/A N/A P0DOX5 40222416
    1004562 9k36:A (2.9) BS01 dna N/A GO:0000287 ... O14802 40468065
    1004563 9k36:A (2.9) BS02 dna N/A GO:0000287 ... O14802 40468065
    1004564 9k36:A (2.9) BS03 rna N/A GO:0000287 ... O14802 40468065
    1004565 9k36:A (2.9) BS04 ZN N/A GO:0000287 ... O14802 40468065
    1004566 9k36:A (2.9) BS05 ZN N/A GO:0000287 ... O14802 40468065
    1004567 9k36:A (2.9) BS06 MG N/A GO:0000287 ... O14802 40468065
    1004568 9k36:B (2.9) BS01 dna N/A GO:0000428 ... Q9NW08 40468065
    1004569 9k36:B (2.9) BS02 dna N/A GO:0000428 ... Q9NW08 40468065
    1004570 9k36:B (2.9) BS03 rna N/A GO:0000428 ... Q9NW08 40468065
    1004571 9k36:B (2.9) BS04 ZN N/A GO:0000428 ... Q9NW08 40468065
    1004572 9k36:B (2.9) BS05 3AT N/A GO:0000428 ... Q9NW08 40468065
    1004573 9k36:I (2.9) BS01 ZN N/A GO:0003676 ... Q9Y2Y1 40468065
    1004574 9k36:J (2.9) BS01 ZN N/A GO:0003677 ... P62875 40468065
    1004575 9k36:L (2.9) BS01 ZN N/A GO:0001650 ... P53803 40468065
    1004576 9k36:P (2.9) BS01 SF4 N/A GO:0003690 ... Q9H1D9 40468065
    1004577 9k38:A (3.1) BS01 dna N/A GO:0000287 ... O14802 40468065
    1004578 9k38:A (3.1) BS02 dna N/A GO:0000287 ... O14802 40468065
    1004579 9k38:A (3.1) BS03 rna N/A GO:0000287 ... O14802 40468065
    1004580 9k38:A (3.1) BS04 ZN N/A GO:0000287 ... O14802 40468065
    1004581 9k38:A (3.1) BS05 ZN N/A GO:0000287 ... O14802 40468065
    1004582 9k38:A (3.1) BS06 MG N/A GO:0000287 ... O14802 40468065
    1004583 9k38:B (3.1) BS01 dna N/A GO:0000428 ... Q9NW08 40468065
    1004584 9k38:B (3.1) BS02 dna N/A GO:0000428 ... Q9NW08 40468065
    1004585 9k38:B (3.1) BS03 rna N/A GO:0000428 ... Q9NW08 40468065
    1004586 9k38:B (3.1) BS04 ZN N/A GO:0000428 ... Q9NW08 40468065
    1004587 9k38:B (3.1) BS05 3AT N/A GO:0000428 ... Q9NW08 40468065
    1004588 9k38:I (3.1) BS01 ZN N/A GO:0003676 ... Q9Y2Y1 40468065
    1004589 9k38:J (3.1) BS01 ZN N/A GO:0003677 ... P62875 40468065
    1004590 9k38:L (3.1) BS01 ZN N/A GO:0001650 ... P53803 40468065
    1004591 9k38:P (3.1) BS01 SF4 N/A GO:0003690 ... Q9H1D9 40468065
    1004592 9k39:A (2.8) BS01 dna N/A GO:0000287 ... O14802 40468065
    1004593 9k39:A (2.8) BS02 dna N/A GO:0000287 ... O14802 40468065
    1004594 9k39:A (2.8) BS03 ZN N/A GO:0000287 ... O14802 40468065
    1004595 9k39:A (2.8) BS04 ZN N/A GO:0000287 ... O14802 40468065
    1004596 9k39:A (2.8) BS05 MG N/A GO:0000287 ... O14802 40468065
    1004597 9k39:B (2.8) BS01 dna N/A GO:0000428 ... Q9NW08 40468065
    1004598 9k39:B (2.8) BS02 dna N/A GO:0000428 ... Q9NW08 40468065
    1004599 9k39:B (2.8) BS03 rna N/A GO:0000428 ... Q9NW08 40468065
    1004600 9k39:B (2.8) BS04 ZN N/A GO:0000428 ... Q9NW08 40468065

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).