SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 5016 5017 5018 5019 5020 5021 5022 5023 5024 5025 5026 5027 5028 5029 5030 5031 5032 5033 5034 5035 5036 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1005001 9k3q:2 (3.02) BS03 CRT N/A GO:0016020 ... P02947 N/A
    1005002 9k3q:2 (3.02) BS04 07D N/A GO:0016020 ... P02947 N/A
    1005003 9k3q:2 (3.02) BS05 CRT N/A GO:0016020 ... P02947 N/A
    1005004 9k3q:3 (3.02) BS01 07D N/A GO:0016020 ... P0C190 N/A
    1005005 9k3q:3 (3.02) BS02 CRT N/A GO:0016020 ... P0C190 N/A
    1005006 9k3q:3 (3.02) BS03 07D N/A GO:0016020 ... P0C190 N/A
    1005007 9k3q:4 (3.02) BS01 CRT N/A GO:0016020 ... P02947 N/A
    1005008 9k3q:4 (3.02) BS02 07D N/A GO:0016020 ... P02947 N/A
    1005009 9k3q:4 (3.02) BS03 CRT N/A GO:0016020 ... P02947 N/A
    1005010 9k3q:4 (3.02) BS04 07D N/A GO:0016020 ... P02947 N/A
    1005011 9k3q:4 (3.02) BS05 CRT N/A GO:0016020 ... P02947 N/A
    1005012 9k3q:5 (3.02) BS01 07D N/A GO:0016020 ... P0C190 N/A
    1005013 9k3q:5 (3.02) BS02 CRT N/A GO:0016020 ... P0C190 N/A
    1005014 9k3q:5 (3.02) BS03 07D N/A GO:0016020 ... P0C190 N/A
    1005015 9k3q:6 (3.02) BS01 CRT N/A GO:0016020 ... P02947 N/A
    1005016 9k3q:6 (3.02) BS02 07D N/A GO:0016020 ... P02947 N/A
    1005017 9k3q:6 (3.02) BS03 CRT N/A GO:0016020 ... P02947 N/A
    1005018 9k3q:6 (3.02) BS04 07D N/A GO:0016020 ... P02947 N/A
    1005019 9k3q:6 (3.02) BS05 CRT N/A GO:0016020 ... P02947 N/A
    1005020 9k3q:7 (3.02) BS01 07D N/A GO:0016020 ... P0C190 N/A
    1005021 9k3q:7 (3.02) BS02 CRT N/A GO:0016020 ... P0C190 N/A
    1005022 9k3q:7 (3.02) BS03 07D N/A GO:0016020 ... P0C190 N/A
    1005023 9k3q:8 (3.02) BS01 CRT N/A GO:0016020 ... P02947 N/A
    1005024 9k3q:8 (3.02) BS02 07D N/A GO:0016020 ... P02947 N/A
    1005025 9k3q:8 (3.02) BS03 CRT N/A GO:0016020 ... P02947 N/A
    1005026 9k3q:8 (3.02) BS04 07D N/A GO:0016020 ... P02947 N/A
    1005027 9k3q:8 (3.02) BS05 CRT N/A GO:0016020 ... P02947 N/A
    1005028 9k3q:9 (3.02) BS01 07D N/A GO:0016020 ... P0C190 N/A
    1005029 9k3q:9 (3.02) BS02 CRT N/A GO:0016020 ... P0C190 N/A
    1005030 9k3q:9 (3.02) BS03 07D N/A GO:0016020 ... P0C190 N/A
    1005031 9k3q:A (3.02) BS01 07D N/A GO:0016020 ... P02947 N/A
    1005032 9k3q:A (3.02) BS02 U10 N/A GO:0016020 ... P02947 N/A
    1005033 9k3q:A (3.02) BS03 07D N/A GO:0016020 ... P02947 N/A
    1005034 9k3q:A (3.02) BS04 CRT N/A GO:0016020 ... P02947 N/A
    1005035 9k3q:D (3.02) BS01 CRT N/A GO:0016020 ... P02947 N/A
    1005036 9k3q:D (3.02) BS02 07D N/A GO:0016020 ... P02947 N/A
    1005037 9k3q:D (3.02) BS03 CRT N/A GO:0016020 ... P02947 N/A
    1005038 9k3q:D (3.02) BS04 07D N/A GO:0016020 ... P02947 N/A
    1005039 9k3q:D (3.02) BS05 CRT N/A GO:0016020 ... P02947 N/A
    1005040 9k3q:E (3.02) BS01 07D N/A GO:0016020 ... P02947 N/A
    1005041 9k3q:E (3.02) BS02 07D N/A GO:0016020 ... P02947 N/A
    1005042 9k3q:E (3.02) BS03 CRT N/A GO:0016020 ... P02947 N/A
    1005043 9k3q:E (3.02) BS04 CRT N/A GO:0016020 ... P02947 N/A
    1005044 9k3q:E (3.02) BS05 07D N/A GO:0016020 ... P02947 N/A
    1005045 9k3q:E (3.02) BS06 CRT N/A GO:0016020 ... P02947 N/A
    1005046 9k3q:F (3.02) BS01 07D N/A GO:0016020 ... P02947 N/A
    1005047 9k3q:F (3.02) BS02 CRT N/A GO:0016020 ... P02947 N/A
    1005048 9k3q:F (3.02) BS03 CRT N/A GO:0016020 ... P02947 N/A
    1005049 9k3q:F (3.02) BS04 07D N/A GO:0016020 ... P02947 N/A
    1005050 9k3q:F (3.02) BS05 CRT N/A GO:0016020 ... P02947 N/A
    1005051 9k3q:G (3.02) BS01 07D N/A GO:0016020 ... P02947 N/A
    1005052 9k3q:G (3.02) BS02 07D N/A GO:0016020 ... P02947 N/A
    1005053 9k3q:G (3.02) BS03 CRT N/A GO:0016020 ... P02947 N/A
    1005054 9k3q:G (3.02) BS04 07D N/A GO:0016020 ... P02947 N/A
    1005055 9k3q:G (3.02) BS05 CRT N/A GO:0016020 ... P02947 N/A
    1005056 9k3q:H (3.02) BS01 07D N/A GO:0019684 ... Q7M149 N/A
    1005057 9k3q:I (3.02) BS01 07D N/A GO:0016020 ... P0C190 N/A
    1005058 9k3q:I (3.02) BS02 CRT N/A GO:0016020 ... P0C190 N/A
    1005059 9k3q:I (3.02) BS03 07D N/A GO:0016020 ... P0C190 N/A
    1005060 9k3q:I (3.02) BS04 07D N/A GO:0016020 ... P0C190 N/A
    1005061 9k3q:J (3.02) BS01 07D N/A GO:0016020 ... P02947 N/A
    1005062 9k3q:J (3.02) BS02 07D N/A GO:0016020 ... P02947 N/A
    1005063 9k3q:J (3.02) BS03 CRT N/A GO:0016020 ... P02947 N/A
    1005064 9k3q:J (3.02) BS04 CRT N/A GO:0016020 ... P02947 N/A
    1005065 9k3q:J (3.02) BS05 07D N/A GO:0016020 ... P02947 N/A
    1005066 9k3q:J (3.02) BS06 CRT N/A GO:0016020 ... P02947 N/A
    1005067 9k3q:K (3.02) BS01 07D N/A GO:0016020 ... P0C190 N/A
    1005068 9k3q:K (3.02) BS02 CRT N/A GO:0016020 ... P0C190 N/A
    1005069 9k3q:K (3.02) BS03 07D N/A GO:0016020 ... P0C190 N/A
    1005070 9k3q:L (3.02) BS01 BPH N/A GO:0009772 ... P10717 N/A
    1005071 9k3q:L (3.02) BS02 U10 N/A GO:0009772 ... P10717 N/A
    1005072 9k3q:L (3.02) BS03 07D N/A GO:0009772 ... P10717 N/A
    1005073 9k3q:L (3.02) BS04 07D N/A GO:0009772 ... P10717 N/A
    1005074 9k3q:L (3.02) BS05 U10 N/A GO:0009772 ... P10717 N/A
    1005075 9k3q:L (3.02) BS06 BPH N/A GO:0009772 ... P10717 N/A
    1005076 9k3q:L (3.02) BS07 U10 N/A GO:0009772 ... P10717 N/A
    1005077 9k3q:L (3.02) BS08 07D N/A GO:0009772 ... P10717 N/A
    1005078 9k3q:M (3.02) BS01 FE N/A GO:0009772 ... P10718 N/A
    1005079 9k3q:M (3.02) BS02 BPH N/A GO:0009772 ... P10718 N/A
    1005080 9k3q:M (3.02) BS03 07D N/A GO:0009772 ... P10718 N/A
    1005081 9k3q:M (3.02) BS04 BPH N/A GO:0009772 ... P10718 N/A
    1005082 9k3q:M (3.02) BS05 U10 N/A GO:0009772 ... P10718 N/A
    1005083 9k3q:M (3.02) BS06 07D N/A GO:0009772 ... P10718 N/A
    1005084 9k3q:M (3.02) BS07 07D N/A GO:0009772 ... P10718 N/A
    1005085 9k3q:M (3.02) BS08 CRT N/A GO:0009772 ... P10718 N/A
    1005086 9k3q:N (3.02) BS01 07D N/A GO:0016020 ... P02947 N/A
    1005087 9k3q:N (3.02) BS02 07D N/A GO:0016020 ... P02947 N/A
    1005088 9k3q:N (3.02) BS03 CRT N/A GO:0016020 ... P02947 N/A
    1005089 9k3q:N (3.02) BS04 CRT N/A GO:0016020 ... P02947 N/A
    1005090 9k3q:N (3.02) BS05 07D N/A GO:0016020 ... P02947 N/A
    1005091 9k3q:N (3.02) BS06 CRT N/A GO:0016020 ... P02947 N/A
    1005092 9k3q:O (3.02) BS01 07D N/A GO:0016020 ... P0C190 N/A
    1005093 9k3q:O (3.02) BS02 CRT N/A GO:0016020 ... P0C190 N/A
    1005094 9k3q:O (3.02) BS03 07D N/A GO:0016020 ... P0C190 N/A
    1005095 9k3q:O (3.02) BS04 07D N/A GO:0016020 ... P0C190 N/A
    1005096 9k3q:Q (3.02) BS01 07D N/A GO:0016020 ... P0C190 N/A
    1005097 9k3q:Q (3.02) BS02 CRT N/A GO:0016020 ... P0C190 N/A
    1005098 9k3q:Q (3.02) BS03 07D N/A GO:0016020 ... P0C190 N/A
    1005099 9k3q:Q (3.02) BS04 07D N/A GO:0016020 ... P0C190 N/A
    1005100 9k3q:R (3.02) BS01 07D N/A GO:0016020 ... P02947 N/A
    1005101 9k3q:R (3.02) BS02 CRT N/A GO:0016020 ... P02947 N/A
    1005102 9k3q:R (3.02) BS03 07D N/A GO:0016020 ... P02947 N/A
    1005103 9k3q:R (3.02) BS04 CRT N/A GO:0016020 ... P02947 N/A
    1005104 9k3q:S (3.02) BS01 07D N/A GO:0016020 ... P0C190 N/A
    1005105 9k3q:S (3.02) BS02 CRT N/A GO:0016020 ... P0C190 N/A
    1005106 9k3q:S (3.02) BS03 07D N/A GO:0016020 ... P0C190 N/A
    1005107 9k3q:T (3.02) BS01 07D N/A GO:0016020 ... P02947 N/A
    1005108 9k3q:T (3.02) BS02 CRT N/A GO:0016020 ... P02947 N/A
    1005109 9k3q:T (3.02) BS03 CRT N/A GO:0016020 ... P02947 N/A
    1005110 9k3q:T (3.02) BS04 07D N/A GO:0016020 ... P02947 N/A
    1005111 9k3q:T (3.02) BS05 CRT N/A GO:0016020 ... P02947 N/A
    1005112 9k3q:U (3.02) BS01 07D N/A GO:0016020 ... P0C190 N/A
    1005113 9k3q:U (3.02) BS02 CRT N/A GO:0016020 ... P0C190 N/A
    1005114 9k3q:U (3.02) BS03 07D N/A GO:0016020 ... P0C190 N/A
    1005115 9k3q:V (3.02) BS01 07D N/A GO:0016020 ... P02947 N/A
    1005116 9k3q:V (3.02) BS02 CRT N/A GO:0016020 ... P02947 N/A
    1005117 9k3q:V (3.02) BS03 07D N/A GO:0016020 ... P02947 N/A
    1005118 9k3q:V (3.02) BS04 CRT N/A GO:0016020 ... P02947 N/A
    1005119 9k3q:W (3.02) BS01 07D N/A GO:0016020 ... P0C190 N/A
    1005120 9k3q:W (3.02) BS02 CRT N/A GO:0016020 ... P0C190 N/A
    1005121 9k3q:W (3.02) BS03 07D N/A GO:0016020 ... P0C190 N/A
    1005122 9k3q:X (3.02) BS01 CRT N/A GO:0016020 ... P02947 N/A
    1005123 9k3q:X (3.02) BS02 07D N/A GO:0016020 ... P02947 N/A
    1005124 9k3q:X (3.02) BS03 CRT N/A GO:0016020 ... P02947 N/A
    1005125 9k3q:X (3.02) BS04 07D N/A GO:0016020 ... P02947 N/A
    1005126 9k3q:Y (3.02) BS01 07D N/A GO:0016020 ... P0C190 N/A
    1005127 9k3q:Y (3.02) BS02 CRT N/A GO:0016020 ... P0C190 N/A
    1005128 9k3q:Y (3.02) BS03 07D N/A GO:0016020 ... P0C190 N/A
    1005129 9k3q:Z (3.02) BS01 07D N/A GO:0016020 ... P02947 N/A
    1005130 9k3q:Z (3.02) BS02 CRT N/A GO:0016020 ... P02947 N/A
    1005131 9k3q:Z (3.02) BS03 CRT N/A GO:0016020 ... P02947 N/A
    1005132 9k3q:Z (3.02) BS04 07D N/A GO:0016020 ... P02947 N/A
    1005133 9k3q:Z (3.02) BS05 CRT N/A GO:0016020 ... P02947 N/A
    1005134 9k3q:d (3.02) BS01 07D N/A GO:0016020 ... P0C190 N/A
    1005135 9k3q:d (3.02) BS02 CRT N/A GO:0016020 ... P0C190 N/A
    1005136 9k3q:d (3.02) BS03 07D N/A GO:0016020 ... P0C190 N/A
    1005137 9k3q:m (3.02) BS01 07D N/A GO:0016020 ... P0C190 N/A
    1005138 9k3q:m (3.02) BS02 CRT N/A GO:0016020 ... P0C190 N/A
    1005139 9k3q:m (3.02) BS03 07D N/A GO:0016020 ... P0C190 N/A
    1005140 9k3q:m (3.02) BS04 07D N/A GO:0016020 ... P0C190 N/A
    1005141 9k3q:n (3.02) BS01 07D N/A GO:0016020 ... P0C190 N/A
    1005142 9k3q:n (3.02) BS02 CRT N/A GO:0016020 ... P0C190 N/A
    1005143 9k3q:n (3.02) BS03 07D N/A GO:0016020 ... P0C190 N/A
    1005144 9k3s:C (2.7) BS01 ATP N/A N/A N/A 41634007
    1005145 9k3s:C (2.7) BS02 MG N/A N/A N/A 41634007
    1005146 9k3s:C (2.7) BS03 ATP N/A N/A N/A 41634007
    1005147 9k3s:D (2.7) BS01 ATP N/A N/A N/A 41634007
    1005148 9k3s:D (2.7) BS02 ATP N/A N/A N/A 41634007
    1005149 9k3s:D (2.7) BS03 MG N/A N/A N/A 41634007
    1005150 9k3u:3 (3.0) BS01 dna N/A GO:0000978 ... Q92966 40468065
    1005151 9k3u:3 (3.0) BS02 dna N/A GO:0000978 ... Q92966 40468065
    1005152 9k3u:4 (3.0) BS01 dna N/A GO:0000978 ... Q5SXM2 40468065
    1005153 9k3u:4 (3.0) BS02 dna N/A GO:0000978 ... Q5SXM2 40468065
    1005154 9k3u:A (3.0) BS01 dna N/A GO:0000287 ... O14802 40468065
    1005155 9k3u:A (3.0) BS02 dna N/A GO:0000287 ... O14802 40468065
    1005156 9k3u:A (3.0) BS03 rna N/A GO:0000287 ... O14802 40468065
    1005157 9k3u:A (3.0) BS04 ZN N/A GO:0000287 ... O14802 40468065
    1005158 9k3u:A (3.0) BS05 ZN N/A GO:0000287 ... O14802 40468065
    1005159 9k3u:A (3.0) BS06 MG N/A GO:0000287 ... O14802 40468065
    1005160 9k3u:B (3.0) BS01 dna N/A GO:0000428 ... Q9NW08 40468065
    1005161 9k3u:B (3.0) BS02 dna N/A GO:0000428 ... Q9NW08 40468065
    1005162 9k3u:B (3.0) BS03 rna N/A GO:0000428 ... Q9NW08 40468065
    1005163 9k3u:B (3.0) BS04 ZN N/A GO:0000428 ... Q9NW08 40468065
    1005164 9k3u:I (3.0) BS01 ZN N/A GO:0003676 ... Q9Y2Y1 40468065
    1005165 9k3u:J (3.0) BS01 ZN N/A GO:0003677 ... P62875 40468065
    1005166 9k3u:L (3.0) BS01 ZN N/A GO:0001650 ... P53803 40468065
    1005167 9k3u:P (3.0) BS01 dna N/A GO:0003690 ... Q9H1D9 40468065
    1005168 9k3u:P (3.0) BS02 SF4 N/A GO:0003690 ... Q9H1D9 40468065
    1005169 9k3u:U (3.0) BS01 dna N/A GO:0000785 ... P20226 40468065
    1005170 9k3u:U (3.0) BS02 dna N/A GO:0000785 ... P20226 40468065
    1005171 9k3u:V (3.0) BS01 dna N/A GO:0000126 ... Q9HAW0 40468065
    1005172 9k3u:V (3.0) BS02 dna N/A GO:0000126 ... Q9HAW0 40468065
    1005173 9k3u:V (3.0) BS03 ZN N/A GO:0000126 ... Q9HAW0 40468065
    1005174 9k3u:W (3.0) BS01 dna N/A GO:0000126 ... A6H8Y1 40468065
    1005175 9k3u:W (3.0) BS02 dna N/A GO:0000126 ... A6H8Y1 40468065
    1005176 9k3v:3 (3.5) BS01 dna N/A GO:0000978 ... Q92966 40468065
    1005177 9k3v:3 (3.5) BS02 dna N/A GO:0000978 ... Q92966 40468065
    1005178 9k3v:4 (3.5) BS01 dna N/A GO:0000978 ... Q5SXM2 40468065
    1005179 9k3v:4 (3.5) BS02 dna N/A GO:0000978 ... Q5SXM2 40468065
    1005180 9k3v:A (3.5) BS01 dna N/A GO:0000287 ... O14802 40468065
    1005181 9k3v:A (3.5) BS02 dna N/A GO:0000287 ... O14802 40468065
    1005182 9k3v:A (3.5) BS03 rna N/A GO:0000287 ... O14802 40468065
    1005183 9k3v:A (3.5) BS04 ZN N/A GO:0000287 ... O14802 40468065
    1005184 9k3v:A (3.5) BS05 ZN N/A GO:0000287 ... O14802 40468065
    1005185 9k3v:A (3.5) BS06 MG N/A GO:0000287 ... O14802 40468065
    1005186 9k3v:B (3.5) BS01 dna N/A GO:0000428 ... Q9NW08 40468065
    1005187 9k3v:B (3.5) BS02 dna N/A GO:0000428 ... Q9NW08 40468065
    1005188 9k3v:B (3.5) BS03 rna N/A GO:0000428 ... Q9NW08 40468065
    1005189 9k3v:B (3.5) BS04 ZN N/A GO:0000428 ... Q9NW08 40468065
    1005190 9k3v:B (3.5) BS05 3AT N/A GO:0000428 ... Q9NW08 40468065
    1005191 9k3v:I (3.5) BS01 ZN N/A GO:0003676 ... Q9Y2Y1 40468065
    1005192 9k3v:J (3.5) BS01 ZN N/A GO:0003677 ... P62875 40468065
    1005193 9k3v:L (3.5) BS01 ZN N/A GO:0001650 ... P53803 40468065
    1005194 9k3v:P (3.5) BS01 dna N/A GO:0003690 ... Q9H1D9 40468065
    1005195 9k3v:P (3.5) BS02 SF4 N/A GO:0003690 ... Q9H1D9 40468065
    1005196 9k3v:U (3.5) BS01 dna N/A GO:0000785 ... P20226 40468065
    1005197 9k3v:U (3.5) BS02 dna N/A GO:0000785 ... P20226 40468065
    1005198 9k3v:V (3.5) BS01 dna N/A GO:0000126 ... Q9HAW0 40468065
    1005199 9k3v:V (3.5) BS02 dna N/A GO:0000126 ... Q9HAW0 40468065
    1005200 9k3v:V (3.5) BS03 ZN N/A GO:0000126 ... Q9HAW0 40468065

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).