SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1007401 9k8e:A (2.84) BS02 ZN N/A N/A N/A N/A
    1007402 9k8e:A (2.84) BS03 ZN N/A N/A N/A N/A
    1007403 9k8e:A (2.84) BS04 ZN N/A N/A N/A N/A
    1007404 9k8e:B (2.84) BS01 ZN N/A N/A N/A N/A
    1007405 9k8e:B (2.84) BS02 ZN N/A N/A N/A N/A
    1007406 9k8e:B (2.84) BS03 ZN N/A N/A N/A N/A
    1007407 9k8e:B (2.84) BS04 ZN N/A N/A N/A N/A
    1007408 9k8e:C (2.84) BS01 ZN N/A N/A N/A N/A
    1007409 9k8e:C (2.84) BS02 ZN N/A N/A N/A N/A
    1007410 9k8e:C (2.84) BS03 ZN N/A N/A N/A N/A
    1007411 9k8e:C (2.84) BS04 ZN N/A N/A N/A N/A
    1007412 9k8e:D (2.84) BS01 ZN N/A N/A N/A N/A
    1007413 9k8e:D (2.84) BS02 ZN N/A N/A N/A N/A
    1007414 9k8e:D (2.84) BS03 ZN N/A N/A N/A N/A
    1007415 9k8e:D (2.84) BS04 ZN N/A N/A N/A N/A
    1007416 9k8e:E (2.84) BS01 ZN N/A N/A N/A N/A
    1007417 9k8e:E (2.84) BS02 ZN N/A N/A N/A N/A
    1007418 9k8e:E (2.84) BS03 ZN N/A N/A N/A N/A
    1007419 9k8e:E (2.84) BS04 ZN N/A N/A N/A N/A
    1007420 9k8e:F (2.84) BS01 ZN N/A N/A N/A N/A
    1007421 9k8e:F (2.84) BS02 ZN N/A N/A N/A N/A
    1007422 9k8e:F (2.84) BS03 ZN N/A N/A N/A N/A
    1007423 9k8e:F (2.84) BS04 ZN N/A N/A N/A N/A
    1007424 9k8e:G (2.84) BS01 ZN N/A N/A N/A N/A
    1007425 9k8e:G (2.84) BS02 ZN N/A N/A N/A N/A
    1007426 9k8e:G (2.84) BS03 ZN N/A N/A N/A N/A
    1007427 9k8e:G (2.84) BS04 ZN N/A N/A N/A N/A
    1007428 9k8e:H (2.84) BS01 ZN N/A N/A N/A N/A
    1007429 9k8e:H (2.84) BS02 ZN N/A N/A N/A N/A
    1007430 9k8e:H (2.84) BS03 ZN N/A N/A N/A N/A
    1007431 9k8e:H (2.84) BS04 ZN N/A N/A N/A N/A
    1007432 9k8e:I (2.84) BS01 ZN N/A N/A N/A N/A
    1007433 9k8e:I (2.84) BS02 ZN N/A N/A N/A N/A
    1007434 9k8e:I (2.84) BS03 ZN N/A N/A N/A N/A
    1007435 9k8e:I (2.84) BS04 ZN N/A N/A N/A N/A
    1007436 9k8e:J (2.84) BS01 ZN N/A N/A N/A N/A
    1007437 9k8e:J (2.84) BS02 ZN N/A N/A N/A N/A
    1007438 9k8e:J (2.84) BS03 ZN N/A N/A N/A N/A
    1007439 9k8e:J (2.84) BS04 ZN N/A N/A N/A N/A
    1007440 9k8e:K (2.84) BS01 ZN N/A N/A N/A N/A
    1007441 9k8e:K (2.84) BS02 ZN N/A N/A N/A N/A
    1007442 9k8e:K (2.84) BS03 ZN N/A N/A N/A N/A
    1007443 9k8e:K (2.84) BS04 ZN N/A N/A N/A N/A
    1007444 9k8e:L (2.84) BS01 ZN N/A N/A N/A N/A
    1007445 9k8e:L (2.84) BS02 ZN N/A N/A N/A N/A
    1007446 9k8e:L (2.84) BS03 ZN N/A N/A N/A N/A
    1007447 9k8e:L (2.84) BS04 ZN N/A N/A N/A N/A
    1007448 9k8f:A (2.75) BS01 ZN N/A N/A N/A N/A
    1007449 9k8f:A (2.75) BS02 ZN N/A N/A N/A N/A
    1007450 9k8g:A (2.75) BS01 ZN N/A N/A N/A N/A
    1007451 9k8g:A (2.75) BS02 ZN N/A N/A N/A N/A
    1007452 9k8g:B (2.75) BS01 ZN N/A N/A N/A N/A
    1007453 9k8g:B (2.75) BS02 ZN N/A N/A N/A N/A
    1007454 9k8g:C (2.75) BS01 ZN N/A N/A N/A N/A
    1007455 9k8g:C (2.75) BS02 ZN N/A N/A N/A N/A
    1007456 9k8h:A (2.71) BS01 ZN N/A N/A N/A N/A
    1007457 9k8h:A (2.71) BS02 ZN N/A N/A N/A N/A
    1007458 9k8h:B (2.71) BS01 ZN N/A N/A N/A N/A
    1007459 9k8h:B (2.71) BS02 ZN N/A N/A N/A N/A
    1007460 9k8i:A (3.16) BS01 ZN N/A N/A N/A N/A
    1007461 9k8i:A (3.16) BS02 ZN N/A N/A N/A N/A
    1007462 9k8i:B (3.16) BS01 ZN N/A N/A N/A N/A
    1007463 9k8i:B (3.16) BS02 ZN N/A N/A N/A N/A
    1007464 9k8i:C (3.16) BS01 ZN N/A N/A N/A N/A
    1007465 9k8i:C (3.16) BS02 ZN N/A N/A N/A N/A
    1007466 9k8i:D (3.16) BS01 ZN N/A N/A N/A N/A
    1007467 9k8i:D (3.16) BS02 ZN N/A N/A N/A N/A
    1007468 9k8i:E (3.16) BS01 ZN N/A N/A N/A N/A
    1007469 9k8i:E (3.16) BS02 ZN N/A N/A N/A N/A
    1007470 9k8i:F (3.16) BS01 ZN N/A N/A N/A N/A
    1007471 9k8i:F (3.16) BS02 ZN N/A N/A N/A N/A
    1007472 9k8i:G (3.16) BS01 ZN N/A N/A N/A N/A
    1007473 9k8i:G (3.16) BS02 ZN N/A N/A N/A N/A
    1007474 9k8i:H (3.16) BS01 ZN N/A N/A N/A N/A
    1007475 9k8i:H (3.16) BS02 ZN N/A N/A N/A N/A
    1007476 9k8i:I (3.16) BS01 ZN N/A N/A N/A N/A
    1007477 9k8i:I (3.16) BS02 ZN N/A N/A N/A N/A
    1007478 9k8i:J (3.16) BS01 ZN N/A N/A N/A N/A
    1007479 9k8i:J (3.16) BS02 ZN N/A N/A N/A N/A
    1007480 9k8i:K (3.16) BS01 ZN N/A N/A N/A N/A
    1007481 9k8i:K (3.16) BS02 ZN N/A N/A N/A N/A
    1007482 9k8i:L (3.16) BS01 ZN N/A N/A N/A N/A
    1007483 9k8i:L (3.16) BS02 ZN N/A N/A N/A N/A
    1007484 9k8j:A (3.12) BS01 ZN N/A N/A N/A N/A
    1007485 9k8k:A (3.25) BS01 ZN N/A N/A N/A N/A
    1007486 9k8k:B (3.25) BS01 ZN N/A N/A N/A N/A
    1007487 9k8l:A (3.21) BS01 ZN N/A N/A N/A N/A
    1007488 9k8l:B (3.21) BS01 ZN N/A N/A N/A N/A
    1007489 9k8l:B (3.21) BS02 ZN N/A N/A N/A N/A
    1007490 9k8l:C (3.21) BS01 ZN N/A N/A N/A N/A
    1007491 9k8l:C (3.21) BS02 ZN N/A N/A N/A N/A
    1007492 9k8r:A (3.1) BS01 NAP N/A N/A A0A8J9S3B0 N/A
    1007493 9k8r:B (3.1) BS01 NAP N/A N/A A0A8J9S3B0 N/A
    1007494 9k8u:A (2.81) BS01 ZN N/A GO:0008270 ... A0A1I7RMX2 N/A
    1007495 9k8u:A (2.81) BS02 ZN N/A GO:0008270 ... A0A1I7RMX2 N/A
    1007496 9k8u:B (2.81) BS01 ZN N/A GO:0008270 ... A0A1I7RMX2 N/A
    1007497 9k8u:B (2.81) BS02 ZN N/A GO:0008270 ... A0A1I7RMX2 N/A
    1007498 9k8u:C (2.81) BS01 ZN N/A GO:0008270 ... A0A1I7RMX2 N/A
    1007499 9k8u:C (2.81) BS02 ZN N/A GO:0008270 ... A0A1I7RMX2 N/A
    1007500 9k8u:D (2.81) BS01 ZN N/A GO:0008270 ... A0A1I7RMX2 N/A
    1007501 9k8u:D (2.81) BS02 ZN N/A GO:0008270 ... A0A1I7RMX2 N/A
    1007502 9k8w:A (2.65) BS01 CA N/A GO:0005509 ... P0DP23
    P42212
    39684209
    1007503 9k8w:A (2.65) BS02 CA N/A GO:0005509 ... P0DP23
    P42212
    39684209
    1007504 9k8w:A (2.65) BS03 CA N/A GO:0005509 ... P0DP23
    P42212
    39684209
    1007505 9k8w:A (2.65) BS04 CA N/A GO:0005509 ... P0DP23
    P42212
    39684209
    1007506 9k8x:A (2.05) BS01 CA N/A GO:0005509 ... P0DP23
    P42212
    39684209
    1007507 9k8x:A (2.05) BS02 CA N/A GO:0005509 ... P0DP23
    P42212
    39684209
    1007508 9k8x:A (2.05) BS03 CA N/A GO:0005509 ... P0DP23
    P42212
    39684209
    1007509 9k8x:A (2.05) BS04 CA N/A GO:0005509 ... P0DP23
    P42212
    39684209
    1007510 9k93:A (3.6) BS01 FTO N/A GO:0016020 ... Q8TCT8 N/A
    1007511 9k95:B (2.9) BS01 A1D6X N/A GO:0000122 ... P49768 N/A
    1007512 9k95:C (2.9) BS01 CLR N/A GO:0000139 ... Q96BI3 N/A
    1007513 9k95:C (2.9) BS02 CLR N/A GO:0000139 ... Q96BI3 N/A
    1007514 9k95:C (2.9) BS03 CLR N/A GO:0000139 ... Q96BI3 N/A
    1007515 9k9l:A (3.66) BS01 dna N/A GO:0000132 ... P49450 40129080
    1007516 9k9l:A (3.66) BS02 dna N/A GO:0000132 ... P49450 40129080
    1007517 9k9l:B (3.66) BS01 dna N/A GO:0000781 ... P62805 40129080
    1007518 9k9l:B (3.66) BS02 dna N/A GO:0000781 ... P62805 40129080
    1007519 9k9l:C (3.66) BS01 dna N/A GO:0000132 ... P49450 40129080
    1007520 9k9l:C (3.66) BS02 dna N/A GO:0000132 ... P49450 40129080
    1007521 9k9l:D (3.66) BS01 dna N/A GO:0000781 ... P62805 40129080
    1007522 9k9l:E (3.66) BS01 dna N/A GO:0000132 ... P49450 40129080
    1007523 9k9l:E (3.66) BS02 dna N/A GO:0000132 ... P49450 40129080
    1007524 9k9l:F (3.66) BS01 dna N/A GO:0000781 ... P62805 40129080
    1007525 9k9l:F (3.66) BS02 dna N/A GO:0000781 ... P62805 40129080
    1007526 9k9l:G (3.66) BS01 dna N/A GO:0000132 ... P49450 40129080
    1007527 9k9l:G (3.66) BS02 dna N/A GO:0000132 ... P49450 40129080
    1007528 9k9l:H (3.66) BS01 dna N/A GO:0000781 ... P62805 40129080
    1007529 9k9l:H (3.66) BS02 dna N/A GO:0000781 ... P62805 40129080
    1007530 9k9n:C (2.61) BS01 MAN N/A N/A A3EX94 N/A
    1007531 9k9r:A (2.61) BS01 dna N/A GO:0000166 ... A0A7H0DN44 40035768
    1007532 9k9r:A (2.61) BS02 dna N/A GO:0000166 ... A0A7H0DN44 40035768
    1007533 9k9r:A (2.61) BS03 MG N/A GO:0000166 ... A0A7H0DN44 40035768
    1007534 9k9r:A (2.61) BS04 TTP N/A GO:0000166 ... A0A7H0DN44 40035768
    1007535 9k9r:B (2.61) BS01 dna N/A GO:0003677 ... M1LL92 40035768
    1007536 9k9s:A (2.39) BS01 dna N/A GO:0000166 ... A0A7H0DN44 40035768
    1007537 9k9s:A (2.39) BS02 dna N/A GO:0000166 ... A0A7H0DN44 40035768
    1007538 9k9s:A (2.39) BS03 MG N/A GO:0000166 ... A0A7H0DN44 40035768
    1007539 9k9s:A (2.39) BS04 TTP N/A GO:0000166 ... A0A7H0DN44 40035768
    1007540 9k9s:B (2.39) BS01 dna N/A GO:0003677 ... M1LL92 40035768
    1007541 9k9t:A (2.96) BS01 dna N/A GO:0000166 ... A0A7H0DN44 40035768
    1007542 9k9t:A (2.96) BS02 dna N/A GO:0000166 ... A0A7H0DN44 40035768
    1007543 9k9u:A (3.08) BS01 dna N/A GO:0000166 ... A0A7H0DN44 40035768
    1007544 9k9u:A (3.08) BS02 dna N/A GO:0000166 ... A0A7H0DN44 40035768
    1007545 9k9v:A (3.0) BS01 dna N/A GO:0000166 ... A0A7H0DN44 40035768
    1007546 9k9v:A (3.0) BS02 dna N/A GO:0000166 ... A0A7H0DN44 40035768
    1007547 9ka6:A (1.47) BS01 6VG N/A GO:0004315 ... P0A6R0 N/A
    1007548 9ka6:C (1.47) BS01 6VG N/A GO:0000035 ... P0A6A8 N/A
    1007549 9ka7:B (2.3) BS01 A1EE0 N/A GO:0004315 ... P0A6R0 N/A
    1007550 9ka7:C (2.3) BS01 A1EE0 N/A GO:0000035 ... P0A6A8 N/A
    1007551 9kae:A (3.1) BS01 dna N/A GO:0003677 ... P03070 40108462
    1007552 9kae:A (3.1) BS02 ANP N/A GO:0003677 ... P03070 40108462
    1007553 9kae:A (3.1) BS03 MG N/A GO:0003677 ... P03070 40108462
    1007554 9kae:A (3.1) BS04 ANP N/A GO:0003677 ... P03070 40108462
    1007555 9kae:B (3.1) BS01 dna N/A GO:0003677 ... P03070 40108462
    1007556 9kae:B (3.1) BS02 ANP N/A GO:0003677 ... P03070 40108462
    1007557 9kae:B (3.1) BS03 MG N/A GO:0003677 ... P03070 40108462
    1007558 9kae:B (3.1) BS04 ANP N/A GO:0003677 ... P03070 40108462
    1007559 9kae:C (3.1) BS01 dna N/A GO:0003677 ... P03070 40108462
    1007560 9kae:C (3.1) BS02 ANP N/A GO:0003677 ... P03070 40108462
    1007561 9kae:C (3.1) BS03 ANP N/A GO:0003677 ... P03070 40108462
    1007562 9kae:D (3.1) BS01 dna N/A GO:0003677 ... P03070 40108462
    1007563 9kae:D (3.1) BS02 ANP N/A GO:0003677 ... P03070 40108462
    1007564 9kae:D (3.1) BS03 ANP N/A GO:0003677 ... P03070 40108462
    1007565 9kae:E (3.1) BS01 dna N/A GO:0003677 ... P03070 40108462
    1007566 9kae:E (3.1) BS02 dna N/A GO:0003677 ... P03070 40108462
    1007567 9kae:E (3.1) BS03 ANP N/A GO:0003677 ... P03070 40108462
    1007568 9kae:E (3.1) BS04 ANP N/A GO:0003677 ... P03070 40108462
    1007569 9kae:F (3.1) BS01 dna N/A GO:0003677 ... P03070 40108462
    1007570 9kae:F (3.1) BS02 dna N/A GO:0003677 ... P03070 40108462
    1007571 9kae:F (3.1) BS03 ANP N/A GO:0003677 ... P03070 40108462
    1007572 9kaj:A (2.64) BS01 COA N/A GO:0009058 ... Q2VAZ3 N/A
    1007573 9kaj:B (2.64) BS01 COA N/A GO:0009058 ... Q2VAZ3 N/A
    1007574 9kaj:C (2.64) BS01 COA N/A GO:0009058 ... Q2VAZ3 N/A
    1007575 9kak:A (3.1) BS01 dna N/A GO:0003677 ... P03070 40108462
    1007576 9kak:A (3.1) BS02 ANP N/A GO:0003677 ... P03070 40108462
    1007577 9kak:A (3.1) BS03 MG N/A GO:0003677 ... P03070 40108462
    1007578 9kak:B (3.1) BS01 dna N/A GO:0003677 ... P03070 40108462
    1007579 9kak:B (3.1) BS02 ANP N/A GO:0003677 ... P03070 40108462
    1007580 9kak:B (3.1) BS03 MG N/A GO:0003677 ... P03070 40108462
    1007581 9kak:B (3.1) BS04 ANP N/A GO:0003677 ... P03070 40108462
    1007582 9kak:C (3.1) BS01 dna N/A GO:0003677 ... P03070 40108462
    1007583 9kak:C (3.1) BS02 dna N/A GO:0003677 ... P03070 40108462
    1007584 9kak:C (3.1) BS03 ANP N/A GO:0003677 ... P03070 40108462
    1007585 9kak:C (3.1) BS04 ANP N/A GO:0003677 ... P03070 40108462
    1007586 9kak:D (3.1) BS01 dna N/A GO:0003677 ... P03070 40108462
    1007587 9kak:D (3.1) BS02 ANP N/A GO:0003677 ... P03070 40108462
    1007588 9kak:E (3.1) BS01 dna N/A GO:0003677 ... P03070 40108462
    1007589 9kak:E (3.1) BS02 dna N/A GO:0003677 ... P03070 40108462
    1007590 9kak:E (3.1) BS03 ANP N/A GO:0003677 ... P03070 40108462
    1007591 9kak:F (3.1) BS01 dna N/A GO:0003677 ... P03070 40108462
    1007592 9kak:F (3.1) BS02 dna N/A GO:0003677 ... P03070 40108462
    1007593 9kak:F (3.1) BS03 ANP N/A GO:0003677 ... P03070 40108462
    1007594 9kak:F (3.1) BS04 MG N/A GO:0003677 ... P03070 40108462
    1007595 9kas:A (2.401) BS01 A1EEY N/A N/A N/A 40173361
    1007596 9kas:B (2.401) BS01 A1EEY N/A N/A N/A 40173361
    1007597 9kau:A (1.88) BS01 OO0 N/A GO:0003824 ... A0A9X7GT53 N/A
    1007598 9kb0:A (2.9) BS01 NDP N/A GO:0016491 ... A0A1C5HQ65 N/A
    1007599 9kb0:C (2.9) BS01 NDP N/A GO:0016491 ... A0A1C5HQ65 N/A
    1007600 9kb1:A (1.77) BS01 ZN N/A GO:0016810 ... N/A N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).