SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    100601 2pk3:A (1.82) BS01 A2R 1.1.1.281 GO:0016491 ... Q6T1X6 19459932
    100602 2pk3:A (1.82) BS02 GDD 1.1.1.281 GO:0016491 ... Q6T1X6 19459932
    100603 2pk3:B (1.82) BS01 A2R 1.1.1.281 GO:0016491 ... Q6T1X6 19459932
    100604 2pk3:B (1.82) BS02 GDD 1.1.1.281 GO:0016491 ... Q6T1X6 19459932
    100605 2pk4:A (2.25) BS01 ACA 3.4.21.7 N/A P00747 1657149 BindingDB: Ki=53000000nM, Kd=9000nM, IC50=105000nM
    100606 2pk5:A (1.9) BS01 075 ? GO:0004190 ... P03367 17581235 MOAD: Kd=20pM
    100607 2pk5:B (1.9) BS01 075 ? GO:0004190 ... P03367 17581235
    100608 2pk6:A (1.45) BS01 O33 ? GO:0004190 ... P03367 17581235
    100609 2pk6:B (1.45) BS01 O33 ? GO:0004190 ... P03367 17581235 MOAD: Kd=13pM
    100610 2pke:A (1.81) BS01 MG ? GO:0016791 ... Q8P4B4 N/A
    100611 2pke:B (1.81) BS01 MG ? GO:0016791 ... Q8P4B4 N/A
    100612 2pkg:C (3.3) BS01 ZN ? N/A P03081 17529992
    100613 2pkg:C (3.3) BS02 ZN ? N/A P03081 17529992
    100614 2pkg:D (3.3) BS01 ZN ? N/A P03081 17529992
    100615 2pkg:D (3.3) BS02 ZN ? N/A P03081 17529992
    100616 2pkk:A (1.93) BS01 2FA 2.7.1.20 GO:0000287 ... P9WID5 17597075
    100617 2pkl:A (2.49) BS01 peptide ? N/A P10275 17911242
    100618 2pkl:A (2.49) BS02 DHT ? N/A P10275 17911242 BindingDB: IC50=>10000nM, EC50=6nM, Ki=0.2nM
    100619 2pkl:A (2.49) BS03 4HY ? N/A P10275 17911242 BindingDB: IC50=34800nM
    100620 2pkm:A (1.9) BS01 ADN 2.7.1.20 GO:0000287 ... P9WID5 17597075
    100621 2pkn:A (1.9) BS01 ACP 2.7.1.20 GO:0000287 ... P9WID5 17597075
    100622 2pkp:A (2.1) BS01 ZN 4.2.1.114 GO:0003861 ... Q58667 20170198
    100623 2pkq:O (3.6) BS01 NDP 1.2.1.13 GO:0006006 ... P12860 17573533
    100624 2pkq:P (3.6) BS01 NDP 1.2.1.13 GO:0006006 ... P19866 17573533
    100625 2pkq:Q (3.6) BS01 NDP 1.2.1.13 GO:0006006 ... P12860 17573533
    100626 2pkq:R (3.6) BS01 NDP 1.2.1.13 GO:0006006 ... P19866 17573533
    100627 2pkq:S (3.6) BS01 NDP 1.2.1.13 GO:0006006 ... P19866 17573533
    100628 2pkq:T (3.6) BS01 NDP 1.2.1.13 GO:0006006 ... P12860 17573533
    100629 2pkr:A (2.4) BS01 NDP 1.2.1.13 GO:0006006 ... P19866 17573533
    100630 2pkr:B (2.4) BS01 NDP 1.2.1.13 GO:0006006 ... P19866 17573533
    100631 2pkr:C (2.4) BS01 NDP 1.2.1.13 GO:0006006 ... P19866 17573533
    100632 2pkr:D (2.4) BS01 NDP 1.2.1.13 GO:0006006 ... P19866 17573533
    100633 2pkr:H (2.4) BS01 NDP 1.2.1.13 GO:0006006 ... P19866 17573533
    100634 2pkr:I (2.4) BS01 NDP 1.2.1.13 GO:0006006 ... P19866 17573533
    100635 2pkr:L (2.4) BS01 NDP 1.2.1.13 GO:0006006 ... P19866 17573533
    100636 2pkr:M (2.4) BS01 NDP 1.2.1.13 GO:0006006 ... P19866 17573533
    100637 2pkr:O (2.4) BS01 NDP 1.2.1.13 GO:0006006 ... P19866 17573533
    100638 2pkr:P (2.4) BS01 NDP 1.2.1.13 GO:0006006 ... P19866 17573533
    100639 2pkr:Q (2.4) BS01 NDP 1.2.1.13 GO:0006006 ... P19866 17573533
    100640 2pkr:R (2.4) BS01 NDP 1.2.1.13 GO:0006006 ... P19866 17573533
    100641 2pks:B (2.5) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 18019535
    100642 2pks:B (2.5) BS02 peptide 3.4.21.5 GO:0004252 ... P00734 18019535
    100643 2pks:C (2.5) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 18019535
    100644 2pks:C (2.5) BS02 G44 3.4.21.5 GO:0004252 ... P00734 18019535 MOAD: ic50=11uM
    100645 2pku:A (-1.00) BS01 peptide ? N/A Q9EP80 17914463
    100646 2pl0:A (2.8) BS01 STI 2.7.10.2 GO:0004672 ... P06239 17910071 BindingDB: Kd=40nM, IC50=320nM, Ki=6893nM
    100647 2pl1:A (1.9) BS01 MG ? GO:0000160 ... P23836 17545283
    100648 2pl1:A (1.9) BS02 BEF ? GO:0000160 ... P23836 17545283
    100649 2pl3:A (2.15) BS01 ADP 3.6.4.13 GO:0003676 ... Q13206 20941364
    100650 2pl9:A (2.6) BS01 peptide ? GO:0000156 ... P0A2D5 18083806
    100651 2pl9:A (2.6) BS02 MG ? GO:0000156 ... P0A2D5 18083806
    100652 2pl9:A (2.6) BS03 BEF ? GO:0000156 ... P0A2D5 18083806
    100653 2pl9:B (2.6) BS01 peptide ? GO:0000156 ... P0A2D5 18083806
    100654 2pl9:B (2.6) BS02 MG ? GO:0000156 ... P0A2D5 18083806
    100655 2pl9:B (2.6) BS03 BEF ? GO:0000156 ... P0A2D5 18083806
    100656 2pl9:C (2.6) BS01 peptide ? GO:0000156 ... P0A2D5 18083806
    100657 2pl9:C (2.6) BS02 MG ? GO:0000156 ... P0A2D5 18083806
    100658 2pl9:C (2.6) BS03 BEF ? GO:0000156 ... P0A2D5 18083806
    100659 2pla:A (2.51) BS01 NAD 1.1.1.8 GO:0002027 ... Q8N335 N/A
    100660 2pla:B (2.51) BS01 NAD 1.1.1.8 GO:0002027 ... Q8N335 N/A
    100661 2pld:A (-1.00) BS01 peptide 3.1.4.11 N/A P08487 8181064
    100662 2ple:A (-1.00) BS01 peptide 3.1.4.11 N/A P08487 8181064
    100663 2plh:A (2.5) BS01 SBT ? GO:0006952 ... P01544 15299760
    100664 2pli:A (1.7) BS01 ZN ? GO:0050660 ... Q9K0P8 N/A
    100665 2pli:A (1.7) BS02 ZN ? GO:0050660 ... Q9K0P8 N/A
    100666 2pli:B (1.7) BS01 ZN ? GO:0050660 ... Q9K0P8 N/A
    100667 2pli:B (1.7) BS02 ZN ? GO:0050660 ... Q9K0P8 N/A
    100668 2pli:B (1.7) BS03 ZN ? GO:0050660 ... Q9K0P8 N/A
    100669 2pli:C (1.7) BS01 ZN ? GO:0050660 ... Q9K0P8 N/A
    100670 2pli:C (1.7) BS02 ZN ? GO:0050660 ... Q9K0P8 N/A
    100671 2pli:D (1.7) BS01 ZN ? GO:0050660 ... Q9K0P8 N/A
    100672 2pli:D (1.7) BS02 ZN ? GO:0050660 ... Q9K0P8 N/A
    100673 2plj:A (1.7) BS01 P3T N/A GO:0003824 ... N/A 17626020
    100674 2plj:B (1.7) BS01 P3T N/A GO:0003824 ... N/A 17626020
    100675 2plk:A (2.14) BS01 P3D N/A GO:0003824 ... N/A 17626020
    100676 2plk:B (2.14) BS01 P3D N/A GO:0003824 ... N/A 17626020
    100677 2pll:A (1.9) BS01 MN 3.5.3.1 GO:0000050 ... P05089 17562323
    100678 2pll:A (1.9) BS02 MN 3.5.3.1 GO:0000050 ... P05089 17562323
    100679 2pll:A (1.9) BS03 ABH 3.5.3.1 GO:0000050 ... P05089 17562323 MOAD: Kd=5nM
    100680 2pll:B (1.9) BS01 MN 3.5.3.1 GO:0000050 ... P05089 17562323
    100681 2pll:B (1.9) BS02 MN 3.5.3.1 GO:0000050 ... P05089 17562323
    100682 2pll:B (1.9) BS03 ABH 3.5.3.1 GO:0000050 ... P05089 17562323 MOAD: Kd=5nM
    100683 2plm:A (2.1) BS01 ZN 3.5.4.28
    3.5.4.31
    GO:0016787 ... Q9X034 17603473
    100684 2plm:A (2.1) BS02 SIB 3.5.4.28
    3.5.4.31
    GO:0016787 ... Q9X034 17603473
    100685 2pls:G (2.15) BS01 MG ? GO:0050660 ... Q8KEZ1 N/A
    100686 2pls:G (2.15) BS02 MG ? GO:0050660 ... Q8KEZ1 N/A
    100687 2pls:H (2.15) BS01 MG ? GO:0050660 ... Q8KEZ1 N/A
    100688 2pls:H (2.15) BS02 MG ? GO:0050660 ... Q8KEZ1 N/A
    100689 2pls:I (2.15) BS01 MG ? GO:0050660 ... Q8KEZ1 N/A
    100690 2pls:I (2.15) BS02 MG ? GO:0050660 ... Q8KEZ1 N/A
    100691 2pls:J (2.15) BS01 MG ? GO:0050660 ... Q8KEZ1 N/A
    100692 2pls:J (2.15) BS02 MG ? GO:0050660 ... Q8KEZ1 N/A
    100693 2plt:A (1.5) BS01 CU ? GO:0005507 ... P18068 8399201
    100694 2plw:A (1.7) BS01 SAM 2.1.1.- GO:0001510 ... Q8IEL9 N/A
    100695 2plx:A (1.56) BS01 peptide 3.4.21.4 GO:0004175 ... P00760 17640870
    100696 2plx:A (1.56) BS02 CA 3.4.21.4 GO:0004175 ... P00760 17640870
    100697 2ply:A (2.6) BS01 rna ? GO:0001514 ... Q46455 17537456
    100698 2ply:A (2.6) BS02 rna ? GO:0001514 ... Q46455 17537456
    100699 2ply:B (2.6) BS01 rna ? GO:0001514 ... Q46455 17537456
    100700 2ply:B (2.6) BS02 rna ? GO:0001514 ... Q46455 17537456
    100701 2ply:B (2.6) BS03 MG ? GO:0001514 ... Q46455 17537456
    100702 2pmc:A (2.688) BS01 peptide ? GO:0000156 ... P0A2D5 18083806
    100703 2pmc:A (2.688) BS02 MG ? GO:0000156 ... P0A2D5 18083806
    100704 2pmc:B (2.688) BS01 peptide ? GO:0000156 ... P0A2D5 18083806
    100705 2pmc:B (2.688) BS02 MG ? GO:0000156 ... P0A2D5 18083806
    100706 2pmd:A (2.65) BS01 GDP 3.6.5.3 GO:0000049 ... Q980A5 17825838
    100707 2pmd:A (2.65) BS02 GNP 3.6.5.3 GO:0000049 ... Q980A5 17825838
    100708 2pmd:A (2.65) BS03 PPV 3.6.5.3 GO:0000049 ... Q980A5 17825838
    100709 2pmd:A (2.65) BS04 PPV 3.6.5.3 GO:0000049 ... Q980A5 17825838
    100710 2pmd:B (2.65) BS01 GDP 3.6.5.3 GO:0000049 ... Q980A5 17825838
    100711 2pmd:B (2.65) BS02 PPV 3.6.5.3 GO:0000049 ... Q980A5 17825838
    100712 2pmd:B (2.65) BS03 PPV 3.6.5.3 GO:0000049 ... Q980A5 17825838
    100713 2pmh:A (1.9) BS01 GLN ? GO:0005829 ... F9VNT4 18653535
    100714 2pmi:A (2.9) BS01 AGS 2.7.11.22 GO:0000082 ... P17157 18042456
    100715 2pmj:A (2.4) BS01 COU 3.1.1.4 GO:0004623 ... P59071 N/A
    100716 2pmk:A (1.6) BS01 128 ? GO:0005524 ... P08716 18155559
    100717 2pmk:A (1.6) BS02 ADP ? GO:0005524 ... P08716 18155559
    100718 2pml:X (2.6) BS01 MN 2.7.12.2 GO:0000165 ... O96214 N/A
    100719 2pml:X (2.6) BS02 ANP 2.7.12.2 GO:0000165 ... O96214 N/A
    100720 2pmn:X (2.8) BS01 K51 2.7.12.2 GO:0000165 ... Q7YTF7 18275814
    100721 2pmo:X (2.9) BS01 HMD 2.7.12.2 GO:0000165 ... Q7YTF7 18275814
    100722 2pmp:A (2.3) BS01 ZN 4.6.1.12 GO:0008685 ... Q9CAK8 17660251
    100723 2pmp:A (2.3) BS02 C5P 4.6.1.12 GO:0008685 ... Q9CAK8 17660251
    100724 2pmq:A (1.72) BS01 MG 5.1.1.22 GO:0000287 ... Q0FPQ4 24056934
    100725 2pmq:B (1.72) BS01 MG 5.1.1.22 GO:0000287 ... Q0FPQ4 24056934
    100726 2pms:A (2.91) BS01 CO3 3.4.21.- GO:0005576 ... P02788 17543335
    100727 2pms:A (2.91) BS02 FE 3.4.21.- GO:0005576 ... P02788 17543335
    100728 2pms:B (2.91) BS01 CO3 3.4.21.- GO:0005576 ... P02788 17543335
    100729 2pms:B (2.91) BS02 FE 3.4.21.- GO:0005576 ... P02788 17543335
    100730 2pms:C (2.91) BS01 ZN ? N/A Q54972 17543335
    100731 2pms:D (2.91) BS01 ZN ? N/A Q54972 17543335
    100732 2pmt:A (2.7) BS01 GSH 2.5.1.18 GO:0004364 ... P15214 9655824
    100733 2pmt:B (2.7) BS01 GSH 2.5.1.18 GO:0004364 ... P15214 9655824
    100734 2pmt:C (2.7) BS01 GSH 2.5.1.18 GO:0004364 ... P15214 9655824
    100735 2pmt:D (2.7) BS01 GSH 2.5.1.18 GO:0004364 ... P15214 9655824
    100736 2pmu:E (1.779) BS01 GLY ? GO:0000160 ... Q7D9B8 18052041
    100737 2pmv:A (2.6) BS01 B12 ? GO:0005515 ... P27352 17954916
    100738 2pmv:C (2.6) BS01 B12 ? GO:0005515 ... P27352 17954916
    100739 2pmy:A (2.3) BS01 CA ? GO:0005509 ... Q8IZ41 N/A
    100740 2pmy:A (2.3) BS02 CA ? GO:0005509 ... Q8IZ41 N/A
    100741 2pmy:B (2.3) BS01 CA ? GO:0005509 ... Q8IZ41 N/A
    100742 2pmy:B (2.3) BS02 CA ? GO:0005509 ... Q8IZ41 N/A
    100743 2pmz:A (3.4) BS01 ZN 2.7.7.6 GO:0000287 ... Q980R2 18235446
    100744 2pmz:A (3.4) BS02 MG 2.7.7.6 GO:0000287 ... Q980R2 18235446
    100745 2pmz:B (3.4) BS01 ZN 2.7.7.6 GO:0000428 ... Q980R1 18235446
    100746 2pmz:D (3.4) BS01 F3S 2.7.7.6 GO:0000428 ... P95989 18235446
    100747 2pmz:N (3.4) BS01 ZN 2.7.7.6 GO:0000428 ... Q980Z8 18235446
    100748 2pmz:P (3.4) BS01 ZN 2.7.7.6 GO:0000428 ... Q97ZX7 18235446
    100749 2pmz:Q (3.4) BS01 ZN 2.7.7.6 GO:0000287 ... Q980R2 18235446
    100750 2pmz:Q (3.4) BS02 MG 2.7.7.6 GO:0000287 ... Q980R2 18235446
    100751 2pmz:R (3.4) BS01 ZN 2.7.7.6 GO:0000428 ... Q980R1 18235446
    100752 2pmz:S (3.4) BS01 F3S 2.7.7.6 GO:0000428 ... P95989 18235446
    100753 2pmz:Y (3.4) BS01 ZN 2.7.7.6 GO:0000428 ... Q980Z8 18235446
    100754 2pmz:Z (3.4) BS01 ZN 2.7.7.6 GO:0000428 ... Q97ZX7 18235446
    100755 2pn6:A (1.44) BS01 GLN ? GO:0005829 ... F9VNT4 18653535
    100756 2pnc:A (2.4) BS01 CU 1.4.3.21 GO:0005507 ... Q29437 17989349
    100757 2pnc:A (2.4) BS02 CA 1.4.3.21 GO:0005507 ... Q29437 17989349
    100758 2pnc:A (2.4) BS03 CA 1.4.3.21 GO:0005507 ... Q29437 17989349
    100759 2pnc:A (2.4) BS04 CLU 1.4.3.21 GO:0005507 ... Q29437 17989349 MOAD: Ki=466uM
    100760 2pnc:B (2.4) BS01 CU 1.4.3.21 GO:0005507 ... Q29437 17989349
    100761 2pnc:B (2.4) BS02 CA 1.4.3.21 GO:0005507 ... Q29437 17989349
    100762 2pnc:B (2.4) BS03 CA 1.4.3.21 GO:0005507 ... Q29437 17989349
    100763 2pnc:B (2.4) BS04 CLU 1.4.3.21 GO:0005507 ... Q29437 17989349 MOAD: Ki=466uM
    100764 2pnj:A (2.35) BS01 FES 4.98.1.1 GO:0004325 ... P22830 17567154
    100765 2pnj:B (2.35) BS01 FES 4.98.1.1 GO:0004325 ... P22830 17567154
    100766 2pnn:A (2.7) BS01 ATP ? GO:0005216 ... O35433 17582331
    100767 2pno:A (3.3) BS01 GSH 2.5.1.-
    4.4.1.20
    GO:0004364 ... Q16873 17632548
    100768 2pno:A (3.3) BS02 GSH 2.5.1.-
    4.4.1.20
    GO:0004364 ... Q16873 17632548
    100769 2pno:B (3.3) BS01 GSH 2.5.1.-
    4.4.1.20
    GO:0004364 ... Q16873 17632548
    100770 2pno:B (3.3) BS02 GSH 2.5.1.-
    4.4.1.20
    GO:0004364 ... Q16873 17632548
    100771 2pno:C (3.3) BS01 GSH 2.5.1.-
    4.4.1.20
    GO:0004364 ... Q16873 17632548
    100772 2pno:C (3.3) BS02 GSH 2.5.1.-
    4.4.1.20
    GO:0004364 ... Q16873 17632548
    100773 2pno:D (3.3) BS01 GSH 2.5.1.-
    4.4.1.20
    GO:0004364 ... Q16873 17632548
    100774 2pno:D (3.3) BS02 GSH 2.5.1.-
    4.4.1.20
    GO:0004364 ... Q16873 17632548
    100775 2pno:E (3.3) BS01 GSH 2.5.1.-
    4.4.1.20
    GO:0004364 ... Q16873 17632548
    100776 2pno:E (3.3) BS02 GSH 2.5.1.-
    4.4.1.20
    GO:0004364 ... Q16873 17632548
    100777 2pno:F (3.3) BS01 GSH 2.5.1.-
    4.4.1.20
    GO:0004364 ... Q16873 17632548
    100778 2pno:F (3.3) BS02 GSH 2.5.1.-
    4.4.1.20
    GO:0004364 ... Q16873 17632548
    100779 2pno:G (3.3) BS01 GSH 2.5.1.-
    4.4.1.20
    GO:0004364 ... Q16873 17632548
    100780 2pno:G (3.3) BS02 GSH 2.5.1.-
    4.4.1.20
    GO:0004364 ... Q16873 17632548
    100781 2pno:H (3.3) BS01 GSH 2.5.1.-
    4.4.1.20
    GO:0004364 ... Q16873 17632548
    100782 2pno:H (3.3) BS02 GSH 2.5.1.-
    4.4.1.20
    GO:0004364 ... Q16873 17632548
    100783 2pno:I (3.3) BS01 GSH 2.5.1.-
    4.4.1.20
    GO:0004364 ... Q16873 17632548
    100784 2pno:I (3.3) BS02 GSH 2.5.1.-
    4.4.1.20
    GO:0004364 ... Q16873 17632548
    100785 2pno:J (3.3) BS01 GSH 2.5.1.-
    4.4.1.20
    GO:0004364 ... Q16873 17632548
    100786 2pno:J (3.3) BS02 GSH 2.5.1.-
    4.4.1.20
    GO:0004364 ... Q16873 17632548
    100787 2pno:K (3.3) BS01 GSH 2.5.1.-
    4.4.1.20
    GO:0004364 ... Q16873 17632548
    100788 2pno:K (3.3) BS02 GSH 2.5.1.-
    4.4.1.20
    GO:0004364 ... Q16873 17632548
    100789 2pno:L (3.3) BS01 GSH 2.5.1.-
    4.4.1.20
    GO:0004364 ... Q16873 17632548
    100790 2pno:L (3.3) BS02 GSH 2.5.1.-
    4.4.1.20
    GO:0004364 ... Q16873 17632548
    100791 2pnq:A (1.81) BS01 MG 3.1.3.43 GO:0004722 ... O88483 17532339
    100792 2pnq:A (1.81) BS02 MG 3.1.3.43 GO:0004722 ... O88483 17532339
    100793 2pnq:B (1.81) BS01 MG 3.1.3.43 GO:0004722 ... O88483 17532339
    100794 2pnq:B (1.81) BS02 MG 3.1.3.43 GO:0004722 ... O88483 17532339
    100795 2pnr:B (2.5) BS01 RED 2.7.11.2 GO:0004672 ... Q15120 17532006
    100796 2pnu:A (1.65) BS01 ENM ? N/A P10275 17711855
    100797 2pnx:A (1.8) BS01 peptide ? N/A Q9UNL4 19187765
    100798 2pnx:A (1.8) BS02 ZN ? N/A Q9UNL4 19187765
    100799 2pnx:A (1.8) BS03 ZN ? N/A Q9UNL4 19187765
    100800 2pnx:C (1.8) BS01 peptide ? N/A Q9UNL4 19187765

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).